ALBERT

Description: Climate change has significant implications for biodiversity and ecosystems. With slow progress towards reducing greenhouse gas emissions, climate engineering (or ‘geoengineering’) is receiving increasing attention for its potential to limit anthropogenic climate change and its damaging effects. Proposed techniques, such as ocean fertilization for carbon dioxide removal or stratospheric sulfate injections to reduce incoming solar radiation, would significantly alter atmospheric, terrestrial and marine environments, yet potential side-effects of their implementation for ecosystems and biodiversity have received little attention. A literature review was carried out to identify details of the potential ecological effects of climate engineering techniques. A group of biodiversity and environmental change researchers then employed a modified Delphi expert consultation technique to evaluate this evidence and prioritize the effects based on the relative importance of, and scientific understanding about, their biodiversity and ecosystem consequences. The key issues and knowledge gaps are used to shape a discussion of the biodiversity and ecosystem implications of climate engineering, including novel climatic conditions, alterations to marine systems and substantial terrestrial habitat change. This review highlights several current research priorities in which the climate engineering context is crucial to consider, as well as identifying some novel topics for ecological investigation.

Description: The surface chemistry of aquatic organisms determines their biotic interactions. Metabolites in the spatially limited laminar boundary layer mediate processes, such as antifouling, allelopathy and chemical defense against herbivores. However, very few methods are available for the investigation of such surface metabolites. An approach is described in which surfaces are extracted by means of C18 solid phase material. By powdering wet algal surfaces with this material, organic compounds are adsorbed and can be easily recovered for subsequent liquid chromatography/mass spectrometry (LC/MS) and gas chromatography/mass spectrometry (GC/MS) investigations. The method is robust, picks up metabolites of a broad polarity range and is easy to handle. It is more universal compared to established solvent dipping protocols and it does not cause damage to the test organisms. A protocol is introduced for the macroalgae Fucus vesiculosus, Caulerpa taxifolia and Gracilaria vermiculophylla, but it can be easily transferred to other aquatic organisms.

Description: Different studies on the position of the non-indigenous species Neogobius melanostomus within the coastal food web of the Pomeranian Bay (western Baltic) were performed, resulting in a quantitative and qualitative species list of prey organisms found in the stomachs of the invader and an estimation concerning the importance of round goby as prey for different resident predators. It seems that the colonization process is not fully completed yet, but the results reveal that the species is already established in the food web 16 years after the first observation within the study area. The results show that N. melanostomus feed upon a wide range of different resident organisms. While a direct predation effect on native fish species appears rather unlikely, indirect effects such as competition cannot yet be excluded. In addition, our results reveal an ontogenetic diet shift and that the round goby itself already serves as an important prey for piscivorous fish and seabirds. Finally, we formulate different hypotheses based on our results which will require further research.

Description: International Ocean Discovery Program (IODP) Expedition 352 recovered a high-fidelity record of volcanism related to subduction initiation in the Bonin fore-arc. Two sites (U1440 and U1441) located in deep water nearer to the trench recovered basalts and related rocks; two sites (U1439 and U1442) located in shallower water further from the trench recovered boninites and related rocks. Drilling in both areas ended in dolerites inferred to be sheeted intrusive rocks. The basalts apparently erupted immediately after subduction initiation and have compositions similar to those of the most depleted basalts generated by rapid sea-floor spreading at mid-ocean ridges, with little or no slab input. Subsequent melting to generate boninites involved more depleted mantle and hotter and deeper subducted components as subduction progressed and volcanism migrated away from the trench. This volcanic sequence is akin to that recorded by many ophiolites, supporting a direct link between subduction initiation, fore-arc spreading, and ophiolite genesis.

Description: Males of Eledone cirrhosa grow to a size little over 600 g and normally have well-developed, and presumably active, reproductive organs from about 200 g upwards. Total weight of the genital bag is well correlated with total body weight (r= 0·906). Growth of the testis precedes that of the spermatophoric sac, and the size of neither of these reproductive components is predictable from body weight. The sizes of these organs and the estimated number and length of stored spermatophores are given for 100 g intervals of total body weight. No evidence was obtained for a seasonal trend in male maturity.

Description: The production of shiga toxin (Stx) is a critical step in the establishment and progress of enterohemorrhagic Escherichia coli (EHEC) infections. The possible release of Stx from dead and dying bacteria, and the risk of resistance development have restricted the usage of antibiotics against EHEC. The chlorinated quaternary ammonium compound, strepthonium A, was isolated from the culture of Streptomyces sp. SBT345 that was cultivated from the Mediterranean sponge Agelas oroides. The structure was elucidated and confirmed by spectroscopic analyses including 1D and 2D NMR, ESI-HRMS, as well as ESI-HRMS2. Strepthonium A follows Lipinski's rule of five with respect to its molecular weight, CLogP values and the number of hydrogen acceptors and donors. Verotoxin ELISA assay demonstrated that Strepthonium A reduced the Stx production in EHEC strain EDL933 at 80 μM concentration without growth inhibition. This study demonstrates the potential of strepthonium A in restraining the production of Stx in EHEC infections.

Description: Land-use dynamic is a major challenge for town and country planners especially in developing countries such as Iran. Iran has been under rapid urban expansion and population growth for past three decades which led to lack of resources, environmental deterioration and haphazard landscape development. In this paper, an attempt has been made to map the urbanization dynamics of Tehran in 40 years based on remote sensing imagery and by means of artificial neural networks. The presented scheme could be taken into consideration when planning initiatives aimed at surveying, monitoring, managing and sustainable development of the territory. Moreover, it can serve the experts in the fields of geography, urban studies and planning as a background for number of geographical analyses.

Description: Current antifouling (AF) technologies are based on the continuous release of biocides into the water, and consequently discharge into the environment. Major efforts to develop more environmentally friendly coatings require efficient testing in laboratory assays, followed by field studies. Barnacles are important fouling organisms worldwide, increasing hydrodynamic drag on ships and damaging coatings on underwater surfaces, and thus are extensively used as models in AF research, mostly in static, laboratory-based systems. Reliable flow-through test assays for the screening of biocide-containing AF paints, however, are rare. Herein, a flow-through bioassay was developed to screen for diverse low-release biocide paints, and to evaluate their effects on pre- and post-settlement traits in barnacles. The assay distinguishes between the effects from direct surface contact and bulk-water effects, which are crucial when developing low-emission AF coatings. This flow-through bioassay adds a new tool for rapid laboratory-based first-stage screening of candidate compounds and novel AF formulations.

Description: One new diterpene, trichocitrin (1), and four known secondary metabolites, nafuredin (2), 5-hydroxy-2,3-dimethyl-7-methoxychromone (3), 24-methylenecycloartanol (4) and citrostadienol (5), were isolated from the culture of marine brown alga-endophytic Trichoderma citrinoviride cf-27. Trichocitrin (1) represents the first Trichoderma-derived and furan-bearing fusicoccane diterpene, and its structure and relative configuration were identified by analysis of 1D/2D NMR and mass spectroscopic data. Compounds 1 and 2 exhibited 8.0- and 9.5-mm inhibition zones, respectively, against Escherichia coli at 20 μg/disc and 54.1 and 36.7% growth inhibition, respectively, of Prorocentrum donghaiense at 80 μg/mL.

Description: New biostratigraphical, geochemical, and magnetic evidence is synthesized with IODP Expedition 352 shipboard results to understand the sedimentary and tectono-magmatic development of the Izu–Bonin outer forearc region. The oceanic basement of the Izu–Bonin forearc was created by supra-subduction zone seafloor spreading during early Eocene (c. 50–51 Ma). Seafloor spreading created an irregular seafloor topography on which talus locally accumulated. Oxide-rich sediments accumulated above the igneous basement by mixing of hydrothermal and pelagic sediment. Basaltic volcanism was followed by a hiatus of up to 15 million years as a result of topographic isolation or sediment bypassing. Variably tuffaceous deep-sea sediments were deposited during Oligocene to early Miocene and from mid-Miocene to Pleistocene. The sediments ponded into extensional fault-controlled basins, whereas condensed sediments accumulated on a local basement high. Oligocene nannofossil ooze accumulated together with felsic tuff that was mainly derived from the nearby Izu–Bonin arc. Accumulation of radiolarian-bearing mud, silty clay, and hydrogenous metal oxides beneath the carbonate compensation depth (CCD) characterized the early Miocene, followed by middle Miocene–Pleistocene increased carbonate preservation, deepened CCD and tephra input from both the oceanic Izu–Bonin arc and the continental margin Honshu arc. The Izu–Bonin forearc basement formed in a near-equatorial setting, with late Mesozoic arc remnants to the west. Subduction-initiation magmatism is likely to have taken place near a pre-existing continent–oceanic crust boundary. The Izu–Bonin arc migrated northward and clockwise to collide with Honshu by early Miocene, strongly influencing regional sedimentation.

Description: Investigating deep water column biodiversity and ecology of the Cape Verde Islands Weekly report 14/2/2018-21/2/2018

Description: Foraging rate was highly variable among shore crabs of the same size category and for individual crabs from day to day. Possible physiological reasons for this variability are discussed. Shore crab foraging rate, both in terms of mussels eaten per day and energy intake per day, was estimated to be higher at 17°C than at 10°C. The shape of diet curves and their mode for male shore crabs at 17°C closely resembled those for 10°C, indicating that the temperature increase had no effect on their previously demonstrated optimal foraging strategy. Female and certain male shore crabs showed a preference for prey smaller than for other equivalent sized males. These suboptimally feeding male and female crabs attained a relatively higher prédation rate (mussels day‐1), although their energy intake (KJ day‐1) remained lower than that of optimally feeding males. Preferred mussel size, number of mussels eaten per day and energy intake were strongly related to master chela height. The diet curves for female and suboptimally feeding male shore crabs could be explained by these crabs’ proportionately smaller master chelae.

Description: On November 11, 2017, GEOMAR and INDP celebrated the inauguration of the "Ocean Science Centre Mindelo (OSCM)". After 3 years of planning and construction works the building has now been handed over to science. The tropical and subtropical Northeast Atlantic is a very exciting region for climate research, marine biology, oceanography and many other disciplines. For many years, scientists of the GEOMAR Helmholtz Centre for Ocean Research Kiel have been conducting campaigns in the area. A few years ago, these numerous long-term activities resulted in the planning of a laboratory and workshop building in Mindelo on the Islands of Cabo Verde. The longstanding and spirited cooperation with the Cape Verdean Institute for Fisheries Development, the Instituto Nacional de Desenvolvimento das Pescas (INDP), was an additional driver for this enterprise. About two and a half years ago, the partners were able to start the implementation of the project idea. GEOMAR is contributing a total of 2.5 million euros. The construction comprises a building, equipped with two universal labs, a wet lab, workshops for maintenance and repair of scientific equipment, storage rooms and offices as well as seminar rooms.

Description: We present chemical data on magmatically heterogeneous pyroclastic deposits of late Quaternary age erupted from zoned magma systems underlying Tenerife (Canary Islands), Sao Miguel and Faial (Azores), and Vesuvius. The most fractionated magmas present at each centre are respectively Na-rich phonolite, trachyte, and K-rich phonolite. Within any one deposit, chemical variation is either accompanied by changes in the phenocryst assemblage (petrographic zonation) or is largely manifested in trace element abundances, unaccompanied by any petrographic change (occult zonation). Zoning is analogous to that in calc-alkaline systems where the most fractionated products are high-silica rhyolites. When a range of magma types are considered, a correlation emerges between roofward depletion of trace elements (especially REE) in the zoned system and compatability of those same trace elements in the accessory phenocryst phases present. Thus, allanite- or chevkinite-bearing rhyolitic systems are light-REE depleted roofwards, the sphene-bearing Tenerife system is middle-REE depleted roofwards, the melanite-bearing Vesuvius system is heavy-REE depleted roofwards, while the Azores systems, which lack these phases, display roofward REE enrichment. Therefore, the behaviour of trace elements may in each case be explained by fractionation of observed phenocryst assemblages. The resemblance between features of zoned magma systems and published work on the dynamic consequences of cooling saturated aqueous solutions prompts us to suggest that sidewall crystallization and consequent boundary-layer uprise to form a capping layer at top of the system may be a plausible mechanism for the generation of both petrographic and occult zonation. Reverse zoning occurs among the first-erupted tephra of some deposits, demonstrating that the most highly differentiated magma available is not always the first to be tapped during an eruption from a zoned system.

Description: Changes in the relative size of the ovary, oviducal glands and eggs are described for Eledone cirrhosa captured from the North Sea off Aberdeen over a 3 year period (N = 488). The analysis is based only on freshly caught animals, excluding those held in aquarium conditions (〉 5 days). Ovary enlargement and egg size estimates are used as indices of sexual maturity. Between 0–15% and 18–95% of total body weight is contributed by the ovary. Maximum egg length in the ovary ranges up to 7 mm. On these criteria, sexual maturation typically occurs at body sizes between 400–1000 g although some animals of 1000–1200 g are found showing no evidence of ovary enlargement. The majority of the monthly sample is always immature but maturation can apparently occur at almost any time of the year. Increase in mean ovary index and mean values for egg size are strongly seasonal and indicate a peak incidence of sexual maturity over 2–3 months in the July-September period. Spawning is presumed to follow within 1 month. Estimates of the fecundity of the females, based on the egg sample from the ovary, range from 2·2 × 103 to 55 × 10 3 eggs with a mean of 11 × 10 3 and a mode of 7·5 × 10 3 eggs.

Description: Female Eledone cirrhosa held in aquarium conditions for periods of time of five daysand over show relatively enlarged ovary sizes. Values for ovary index considerably exceed thoseof freshly caught animals and the incidence of the final stage of maturity, in which eggs pack the oviducts, is greater. A comparison of maturity indices for fresh and aquarium males was inconclusive. The range of factors associated with aquarium conditions is briefly reviewed and it is concluded that studies of cephalopod reproductive maturation must distinguish fresh and aquarium animals. Introduction External factors effective in inducing sexual maturation in cephalopods have been suggested several times. The influence of the absence of light has been implicated since the experiments of Wells & Wells (1959) showed that blinded Octopus vulgar is matured precociously. An effect of short day length in stimulating the optic glands of Sepia has been found by Defretin & Richard (1967) and Richard (1967) but this is not clearly the case for Octopus (Buckley, 1977). Octopuses kept in aquarium conditions for lengthy periods are said to have larger relative gonad sizes than those fresh from the sea (Wells & Wells, 1975). One of the factors associated with aquarium conditions is often a degree of starvation, and this circumstance alone is held to be a factor in inducing precocious sexual maturation in Eledone (Mangold & Boucher-Rodoni, 1973). In the course of recent studies on the growth and reproduction of Eledone cirrhosa from the North Sea (Boyle & Knobloch, 1982,1983,1984) animals which had remained in aquarium conditions for 5 days or over were separated from the analysis.

Description: Antarctica is a still unexplored area in many respects, among which biological diversity and, even more so, chemical diversity are important challenges. Over recent years, our research group has been studying marine benthic ecosystems in different Antarctic areas. These studies yielded several interesting discoveries, including species new to science, as well as new natural products never seen before. Overall, we have been trying to unravel the complex network of interactions that exist between marine benthic organisms in these cold and hardly accessible ecosystems. We present here an overview of our recent results regarding the biological and the chemical diversity of these organisms. In fact, these ecosystems are as complex as many other marine environments on the planet, and indeed, many questions remain yet to be answered.

Description: IODP Expedition 350 was the first to be drilled in the rear part of the Izu-Bonin, although several sites had been drilled in the arc axis to fore-arc region; the scientific objective was to understand the evolution of the Izu rear arc, by drilling a deep-water volcaniclastic section with a long temporal record (Site U1437). The Izu rear arc is dominated by a series of basaltic to dacitic seamount chains up to ~100-km long roughly perpendicular to the arc front. Dredge samples from these are geochemically distinct from arc front rocks, and drilling was undertaken to understand this arc asymmetry. Site U1437 lies in an ~20-km-wide basin between two rear arc seamount chains, ~90-km west of the arc front, and was drilled to 1804 m below the sea floor (mbsf) with excellent recovery. We expected to drill a volcaniclastic apron, but the section is much more mud-rich than expected (~60%), and the remaining fraction of the section is much finer-grained than predicted from its position within the Izu arc, composed half of ashes/tuffs, and half of lapilli tuffs of fine grain size (clasts 〈3 cm). Volcanic blocks (〉6.4 cm) are only sparsely scattered through the lowermost 25% of the section, and only one igneous unit was encountered, a rhyolite peperite intrusion at ~1390 mbsf. The lowest biostratigaphic datum is at 867 mbsf (~6.5 Ma), the lowest palaeomagnetic datum is at ~1300 mbsf (~9 Ma), and the rhyolite peperite at ~1390 mbsf has yielded a U–Pb zircon concordia intercept age of (13.6 + 1.6/−1.7) Ma. Both arc front and rear arc sources contributed to the fine-grained (distal) tephras of the upper 1320 m, but the coarse-grained (proximal) volcaniclastics in the lowest 25% of the section are geochemically similar to the arc front, suggesting arc asymmetry is not recorded in rocks older than ~13 Ma.

Description: A new species of a monogenean Isancistrum subulatae (Gyrodactylidae) has been discovered on the arms and tentacles of the cephalopod mollusc Alloteuthis subulata at Plymouth and I. loliginis, on the gills of the same host, has been re-discovered for the first time since its original description in 1912. I. subulatae, like other gyrodactylids, is viviparous, and has been shown by experiments to transfer to new hosts by contagion. In nature such transfers probably take place during copulation of the hosts and since the parasite may occur in numbers of several thousands per host, it may thereby constitute a venereal disease.

Description: In this opinion paper, we, a group of scientists from environmental-, geo-, ocean- and information science, argue visual data exploration should become a common analytics approach in Earth system science due to its potential for analysis and interpretation of large and complex spatio-temporal data. We discuss the challenges that appear such as synthesis of heterogeneous data from various sources, reducing the amount of information and facilitating multidisciplinary, collaborative research. We argue that to fully exploit the potential of visual data exploration, several bottlenecks and challenges have to be addressed: providing an efficient data management and an integrated modular workflow, developing and applying suitable visual exploration concepts and methods with the help of effective and tailored tools as well as generating and raising the awareness of visual data exploration and education. We are convinced visual data exploration is worth the effort since it significantly facilitates insight into environmental data and derivation of knowledge from it.

Description: Seit mehr als 25 Jahren lernen, arbeiten und leben Meereswissenschaftlerinnen und Meereswissenschaftler auf dem Kieler Forschungsschiff ALKOR. 500 Expeditionen hat das 55 Meter lange Schiff mittlerweile absolviert. Es ist neben der POSEIDON das zweite „mittelgroße“ Forschungsschiff, das am GEOMAR stationiert ist.

Description: In this study, Lade's double-surface work-hardening constitutive model was adopted which uses the elasto-plasticity model as a basic conceptual framework. The model can analyze work hardening and work softening of nonlinear stress-strain behavior, and is regarded as superior to other elasto-plasticity constitutive models in terms of estimation. In the double-surface work-hardening constitutive model, 14 soil parameters are needed to estimate soil behaviors. To determine them, laboratory tests—isotropical consolidation test and conventional compression test—were conducted. Determining of soil parameters is highly complicated and time-consuming; randomness cannot be ruled out in determining parameters that are sensitive to stress-strain estimation, and error may occur. For this reason, a linear and nonlinear regression analysis was used to determine soil parameters. In estimation of undrained behavior, the estimated stress-strain behavior based on the two constitutive models largely overlapped with the test results. However, in estimating drained behavior, the outcome of the two models and the test results were mostly the same, but between the two models, the double-surface work-hardening constitutive model had a sharper slope in initial stress state, and a smaller maximum deviatoric stress.

Description: The behaviour of Chelophyes has been analysed from the point of view of coordination between stem and nectophores, and an electron microscope study of the effectors and conducting elements has been carried out. Coordination between the stem and anterior nectophore involves two pathways, one epithelial and the other nervous. The nervous link consists of a bundle of small neurites and a single giant axon. There is some evidence that this mediates rapid escape behaviour. After the nerves have been cut, coordination is maintained via the epithelial route. Impulses can jump from epithelial cells into nerves but the transmission process is unclear. Neuro‐epithelial transmission involves conventional synapses. As in physonectid siphonophores, the stem has two nervous systems each with its own giant fibre, and a slow system, the endodermal epithelium. In the nectophore, marginal nerve centres generate a swimming rhythm. Conduction in the subumbrellar muscle is myoid. The exumbrellar epithelium and the subumbrellar endoderm are conducting tissues. Histological study reveals synapses in the predicted locations and gives details of myo‐epithelial organization and nervous layout. Novel histological features include elements resembling steroid‐secreting cells, which ensheath nerves and are innervated by them, and innervated giant non‐nervous cells lying between the nerve ring and the hydroecium. The subumbrellar muscle cells are shown to have sarcolemmal invaginations reminiscent of the f‐tubule system of vertebrate muscle.

Description: The major light and dark components of body displays are described and classified for the octopus Eledone cirrhosa (Lamarck) under aquarium conditions. Comparisons are made with Octopus vulgaris and Eledone moschata. Upon the basic similarity of white display components in the three species is superimposed a trend of modification. Dark components are less various in Eledone cirrhosa and although the chromatophores are organised with leucophores into chromatic units these are not clearly limited morphologically by “grooves”. The mottle patterns of Eledone seem to be arranged along the longitudinal and latitudinal (radial) axes of the animal, the grade of mottle does not respond to grade of background contrast.

Description: Dates of Cruise: 16.05. – 28.05.2016 Areas of Research: Physical, chemical, biological and fishery oceanography Port Calls: Klaipeda, Lithuania, 21.05. – 23.05.2016

Description: The aim of this study was to test the effects of temperature on phenolic content of the brown seaweed Cystoseira amentacea. Phenolic compounds are secondary metabolites involved in different protection mechanisms as, for example, against grazers, epiphytes and UV radiation. Seasonal variations of phenolic content in C. amentacea were analysed and laboratory experiments, in which C. amentacea was exposed to an increase of temperature (25°C and 30°C), were performed. Total phenolic content (TPC) was determined colorimetrically with the Folin–Ciocalteu reagent. In C. amentacea, a seasonal pattern in TPC was observed, with a maximum value in winter-spring. C. amentacea responded significantly to the temperature treatments with a consistent decrease in TPC after 48 h.

Description: Fluorescent-amplified fragment length polymorphism (FAFLP) fingerprinting assay was used to compare the genetic diversity within and between tadpole shrimps (Notostraca) populations of Lepidurus apus (n=7) and Triops cancriformis (n=2) from rain pools in Israel. Each ephemeral water body has revealed a unique fingerprint pattern with an entailed genetic drift between nearby ponds. High similarity of genotypic diversity within each geographic area led to three clusters of water bodies, north, south and center of Israel. FAFLP assays on several newly hatched individuals of T. cancriformis revealed high identity amongst kin, as compared to L. apus where newly hatched from the same maternal source showed high diversity. Results indicate that T. cancriformis populations from Israel are probably parthenogenetic as indicated by clonal structures. The higher genetic variability in the L. apus populations and in laboratory-hatched specimens indicates the existence of sexual reproduction.

Description: Gammarids from the Caspian complex have invaded many European waters along the rivers and canals of the inland migration corridors. The species examined in this work are well known as invaders of European freshwater environments, so the colonization of brackish habitats is a phenomenon inviting more detailed investigation. The aim of this study was to determine the condition of the Ponto-Caspian gammarids Pontogammarus robustoides (G.O. Sars, 1894), Obesogammarus crassus (G.O. Sars, 1894), Dikerogammarus haemobaphes (Eichwald, 1841) and Dikerogammarus villosus (Sowinsky, 1894) as expressed by the relationship between total length and the wet weight of specimens in the brackish waters of the Gulf of Gdansk (Poland). The relationships can be regarded as responses to a newly expanded habitat after they overcome the salinity barrier of the southern Baltic Sea coastal waters. All these Ponto-Caspian gammarids demonstrated an increase in weight with increasing total length: P. robustoides (b = 2.852), O. crassus (b = 3.3477), D. haemobaphes (b = 3.7855) and D. villosus (b = 2.6917). The results are an indicator of the relatively good condition of the organisms and indicate that the brackish environment of the Gulf of Gdansk affords them excellent possibilities for growth.

Description: Dates of Cruise: 13.05. – 29.05.2017 Areas of Research: Physical, chemical, biological and fishery oceanography Port Calls: Visby, Sweden, 19.05. – 21.05.2016

Description: A bioassay-guided approach was used to identify defense compounds that are present on the surface of Zostera marina and which inhibit settlement of microfoulers at natural concentrations. Moderately polar eelgrass surface extracts inhibited the settlement of seven marine bacteria and one yeast that originated from non-living substrata. In contrast, five other bacterial strains that had been directly isolated from eelgrass surfaces were all insensitive, which suggested a selective effect of surface metabolites on the microbial communities present on eelgrass. Bioassay-guided isolation of active compounds from the extracts in combination with UPLC-MS and 1H-NMR spectroscopy resulted in the identification of rosmarinic acid, luteolin-7-sulfate and diosmetin-7-sulfate or its isomer chrysoeriol-7-sulfate. All three compounds are nontoxic repellents, as they did not inhibit bacterial growth, but prevented bacterial settlement in a dose-dependent manner. Between 15.6 and 106.8 μg ml−1 of rosmarinic acid were present on the eelgrass surface, enough for half maximal settlement inhibition of bacteria.

Description: Diese Broschüre und die gleichnamige Ausstellung befassen sich mit der Entwicklung des Echolots, für das der Kieler Physiker und Unternehmer Alexander Behm im Jahr 1913 das erste Patent erhielt. Erfahren Sie mehr über die Geschichte der Tiefenmessung im Ozean – von den ersten Handloten im alten Ägypten über die dampfgetriebenen Lotmaschinen des 19. Jahrhunderts, der Entwicklung der ozeanischen Tiefenkarten bis hin zur heutigen Vermessung des Meeresbodens mit modernen Fächerecholoten.

Description: For the environmental monitoring of coral, mucus appears to be an appropriate biological matrix due to its array of functions in coral biology and the non-intrusive manner in which it can be collected. The aim of the present study was to evaluate the feasibility of using mucus of the stony coral Lophelia pertusa (L. pertusa) as an analytical matrix for discovery of biomarkers used for environmental monitoring. More specifically, to assess whether a mass-spectrometry-based proteomic approach can be applied to characterize the protein composition of coral mucus and changes related to petroleum discharges at the seafloor. Surface-enhanced laser desorption/ionization–time of flight mass spectrometry (SELDI-TOF MS) screening analyses of orange and white L. pertusa showed that the mucosal protein composition varies significantly with color phenotype, a pattern not reported prior to this study. Hence, to reduce variability from phenotype difference, L. pertusa white individuals only were selected to characterize in more detail the basal protein composition in mucus using liquid chromatography, mass spectrometry, mass spectrometry (LC-MS/MS). In total, 297 proteins were identified in L. pertusa mucus of unexposed coral individuals. Individuals exposed to drill cuttings in the range 2 to 12 mg/L showed modifications in coral mucus protein composition compared to unexposed corals. Although the results were somewhat inconsistent between individuals and require further validation in both the lab and the field, this study demonstrated preliminary encouraging results for discovery of protein markers in coral mucus that might provide more comprehensive insight into potential consequences attributed to anthropogenic stressors and may be used in future monitoring of coral health.

Description: The progressive bond breakage of artificially cemented sands induced by shear straining was investigated through conventional isotropically consolidated drained triaxial compression tests. Sand specimens were prepared with a low degree of cementation by adopting a chemical grout. Test results were interpreted in terms of two stress–dilatancy theories for cohesive-frictional materials proposed in literature. The influence of debonding on the stress–dilatancy behaviour of cemented sands was analysed with particular emphasis on the ‘delayed dilatancy’ phenomenon. A bonding degradation curve was determined for each test relating the interparticle cohesion (c) to the magnitude of the total plastic strain vector (εd) and a bond degradation rate factor (Dc) was assessed from each curve. The maximum value of interparticle cohesion (c0) before the onset of bond degradation under shearing was found to correspond with a sharp decrease in the soil stiffness of the specimens. The influence of the effective confining stress (p′c)on both c0 and Dc parameters gathered from each test was also ascertained.

Description: We studied the combined direct physiological and indirect food web effects of ocean acidification on herring larvae inside pelagic mesocosms. A natural plankton community of the Gullmarsfjord, Sweden was enclosed in the Kiel Off-Shore Mesocosms for future Ocean Simulations (KOSMOS) for 113 days from March to June 2013 at ambient and projected end-of-the-century CO2 levels (~760 µatm pCO2). Herring eggs were introduced into the mesocosms, where they hatched in mid of May. The larvae developed inside the mesocosms for ~6 weeks, feeding on prey organisms that experienced treatment CO2 levels for ~9 weeks. This video is meant as an illustration of the herring larvae«s performance inside our mesocosm units.

Description: Study of Nautilus belauensis i its natural habitat in Palau, West Caroline Islands, shows that growth is slow (0.1 millimeter of shell per day on the average) and decreases as maturity is approached and that individuals may live at least 4 years beyond maturity. Age estimates for seven animals marked and recaptured between 45 and 355 days after release range from 14.5 to 17.2 years. These data indicate that the life-span of Nautilus may exceed 20 years and that its life strategy is very different from that of other living cephalopods.

Description: Results from two recent field trials, onshore in the Alaska permafrost and in the Nankai Trough offshore Japan, suggest that natural gas could be produced from marine gas hydrate reservoirs at compatible yields and rates. However, both field trials were accompanied by different technical issues, the most striking problems resulting from un-predicted geomechanical behaviour, sediment destabilization and catastrophic sand production. So far, there is a lack of experimental data which could help to understand relevant mechanisms and triggers for potential soil failure in gas hydrate production, to guide model development for simulation of soil behaviour in large-scale production, and to identify processes which drive or, further, mitigate sand production. We use high-pressure flow-through systems in combination with different online and in situ monitoring tools (e.g. Raman microscopy, MRI) to simulate relevant gas hydrate production scenarios. Key components for soil mechanical studies are triaxial systems with ERT (Electric resistivity tomography) and high-resolution localstrain analysis. Sand production control and management is studied in a novel hollow-cylinder-type triaxial setup with a miniaturized borehole which allows fluid and particle transport at different fluid injection and flow conditions. We further apply a novel large-scale high-pressure flow-through triaxial test system equipped with μ-CT to evaluate soil failure modes and triggers relevant to gas hydrate production and slope stability. The presentation will emphasize an in-depth evaluation of our experimental approach, and it is our concern to discuss important issues of translating laboratory results to gas hydrate reservoirs in nature. We will present results from high-pressure flow-through experiments which are designed to systematically compare soil mechanical behaviour of gas hydrate-bearing sediments in relevant production scenarios focusing on depressurization and CO2 injection. Experimental datasets are analyzed based on numerical models which are able to simulate coupled process dynamics during gas hydrate formation and gas production.

Description: Introduction. Today, most countries have accepted a 2 degrees Celsius temperature increase above preindustrial levels as the maximum tolerable limit for global warming. An exceedance probability of below 20 percent for this limit implies an emission budget of less than 250 GtC from 2000 until 2049, however, extrapolating from current global CO2 emissions, this budget will only last until 2024. This sobering math should wake us up to the reality that all options, including climate engineering, need to be considered to address climate change. Climate engineering options can be classified broadly into two categories: solar radiation management and carbon dioxide removal measures. Solar radiation management schemes seek to decrease the incoming solar radiation or to increase the reflection of incoming solar radiation. These approaches can generate fast climate responses, but do not immediately address the cause of the problem. Carbon dioxide removal measures seek to decrease atmospheric carbon concentrations by enhancing or substituting natural carbon sinks. The terrestrial carbon sink can be enhanced by means of forestation; the oceanic sink may, in some regions, be enhanced by means of fertilization, for example by artificially enhanced upwelling of macronutrients or by purposeful addition of the micronutrient iron; the mineral carbon sink can be enhanced by means of chemically accelerated weathering. Some analysts have expressed doubts about the potential of mitigating climate change by sink enhancement, because of concerns about whether carbon can be stored permanently. Nevertheless, terrestrial vegetation sinks have entered the Kyoto Protocol (KP) as offsets for anthropogenic greenhouse gas emissions, but ocean sinks have not.

Description: Manganese nodule coverage is estimated based on multi-beam and deep-towed video nodule survey profiles of about 1,700 km in the China Pioneer Area of Eastern Pacific. Two statistical equations for estimating nodule coverage are derived separately from the multi-beam normal incidence amplitude data and angular amplitude data based on theoretical analysis of influence factors on multi-beam amplitude data. Predictions generated by the normal incidence amplitude model fall within 5% of real nodule coverage, and theoretically calculated angular amplitude data fits well with the original multi-beam amplitudes at incident angles larger than 20° according to nodule coverage estimated from the deep-towed video data.

Description: Suspended particulate matter (SPM) causes most of the scattering in natural waters and thus has a strong influence on the underwater light field, and consequently on the whole ecosystem. Turbidity is related to the concentration of SPM which usually is measured gravimetrically, a rather time-consuming method. Measuring turbidity is quick and easy, and therefore also more cost-effective. When derived from remote sensing data the method becomes even more cost-effective because of the good spatial resolution of satellite data and the synoptic capability of the method. Turbidity is also listed in the European Union’s Marine Strategy Framework Directive as a supporting monitoring parameter, especially in the coastal zone. In this study, we aim to provide a new Baltic Sea algorithm to retrieve SPM concentration from in situ turbidity and investigate how this can be applied to satellite data. An in situ dataset was collected in Swedish coastal waters to develop a new SPM model. The model was then tested against independent datasets from both Swedish and Lithuanian coastal waters. Despite the optical variability in the datasets, SPM and turbidity were strongly correlated (r = 0.97). The developed model predicts SPM reliably from in situ turbidity (R2 = 0.93) with a mean normalized bias (MNB) of 2.4% for the Swedish and 14.0% for the Lithuanian datasets, and a relative error (RMS) of 25.3% and 37.3%, respectively. In the validation dataset, turbidity ranged from 0.3 to 49.8 FNU (Formazin Nephelometric Unit) and correspondingly, SPM concentration ranged from 0.3 to 34.0 g m–3 which covers the ranges typical for Baltic Sea waters. Next, the medium-resolution imaging spectrometer (MERIS) standard SPM product MERIS Ground Segment (MEGS) was tested on all available match-up data (n = 67). The correlation between SPM retrieved from MERIS and in situ SPM was strong for the Swedish dataset with r = 0.74 (RMS = 47.4 and MNB = 11.3%; n = 32) and very strong for the Lithuanian dataset with r = 0.94 (RMS = 29.5% and MNB = −1.5%; n = 35). Then, the turbidity was derived from the MERIS standard SPM product using the new in situ SPM model, but retrieving turbidity from SPM instead. The derived image was then compared to existing in situ data and showed to be in the right range of values for each sub-area. The new SPM model provides a robust and cost-efficient method to determine SPM from in situ turbidity measurements (or vice versa). The developed SPM model predicts SPM concentration with high quality despite the high coloured dissolved organic matter (CDOM) range in the Baltic Sea. By applying the developed SPM model to already existing remote sensing data (MERIS/Envisat) and most importantly to a new generation of satellite sensors (in particular OLCI on board the Sentinel-3), it is possible to derive turbidity for the Baltic Sea.

Description: The growth of the octopus Eledone cirrhosa has been studied in a population from the North Sea off Aberdeen. Data are presented for the growth of individuals isolated in aquarium conditions; the growth of size classes in thefieldpopulation; and preliminary information on the growth relationships of gonad, somatic, cardiac and brain components of the body. At 15 °C Eledone cirrhosa is capable of growing from 10 to 1000 g in 270 days. From octopuses which feed readily in captivity, weight specific growth rates of up to about 3–5 % day-1 for animals of 100 g body weight are recorded, falling to a maximum of about 1–5 % day-1 at body sizes above 500 g. Females stop growing when sexually mature, but in the sample captured they were consistently larger than males, a feature which may account for the 7:1 bias towards the incidence of females. On a wet-weight basis, the mean food incorporation into growth is 37 % of the food ingested, which is 49% of the gross weight of crabs killed. Field data for 1978/79 suggest that animals recruited to the population at the beginning of the year grew steadily until December, overwintered without growing, then grew rapidly for several months in the subsequent year before disappearing from the samples. The estimated average age of those animals and by implication, the life span, is 20 months.

Description: Wochenbericht der Forschungsreise mit R.V. „Alkor“ AL 493 13.05.2017 – 20.05.2017

Description: Plate-boundary fault rupture during the 2004 Sumatra-Andaman subduction earthquake extended closer to the trench than expected, increasing earthquake and tsunami size. International Ocean Discovery Program Expedition 362 sampled incoming sediments offshore northern Sumatra, revealing recent release of fresh water within the deep sediments. Thermal modeling links this freshening to amorphous silica dehydration driven by rapid burial-induced temperature increases in the past 9 million years. Complete dehydration of silicates is expected before plate subduction, contrasting with prevailing models for subduction seismogenesis calling for fluid production during subduction. Shallow slip offshore Sumatra appears driven by diagenetic strengthening of deeply buried fault-forming sediments, contrasting with weakening proposed for the shallow Tohoku-Oki 2011 rupture, but our results are applicable to other thickly sedimented subduction zones including those with limited earthquake records.

Description: The spatial variations in the elemental and stable carbon, nitrogen, and sulphur isotope composition of bladder wrack (Fucus vesiculosus) growing along the shore line of the semi-enclosed urbanized Kiel Fjord (western Baltic Sea) was investigated at more than 60 sites. The analyses of the carbon-nitrogen-sulphur (CNS) stoichiometry and C and N stable isotope signature of F. vesiculosus displayed substantial differences between the north-western and the south-eastern parts of the Kiel Fjord. Different size classes displayed in part differences in C:N and C:S ratios, and the carbon isotope composition, reflecting the impact of the boundary conditions during growth. Whereas the sulphur isotope composition was controlled by the assimilation of seawater sulphate, the carbon isotope composition reflected the difference in the composition of surface waters. The δ15N values of the organic tissue tend to be an integrated monitor of anthropogenic impacts on the fjord. Results are compared to the composition of surface waters.

Description: The fluttering shearwater (Puffinus gavia) is an abundant seabird endemic to breeding colonies in northern and central New Zealand. The species remains poorly studied, and here we present the first study to examine its breeding biology in detail. Fluttering shearwater nests were monitored daily from laying in September 2015 to fledging in January 2016 on Burgess Island (Mokohinau Islands group) in the outer Hauraki Gulf, northern New Zealand. Burrows were generally simple and non-branched. Eggs were laid over a period of 39 days with laying peaking 12th September. Incubation was 50 ± 3.7 days and chicks fledged after an average of 74 ± 4.3 days, from late December to the end of January. Chick development corresponds to the pattern observed for other Procellariiformes, gaining body mass rapidly to a maximum of 115% of adult mass, and then losing weight until fledging. Chicks were fed most nights throughout chick-rearing, indicating adult birds have access to a stable food supply close to the colony. Breeding success was 63.8% and similar to other Puffinus species. This study provides baseline biological data for a poorly studied, yet common, New Zealand endemics seabird. The obtained new information will allow for further ecological investigations and improved conservation management for the species

Description: 13.4.-28.4.2017 Physical, chemical, biological research and fishery oceanography This multidisciplinary cruise extended a long-term data series on (eco-)system composition and functioning of the Baltic Sea, with a focus on the deeper basins. The series has been collected in similar form since 1986. A key characteristic of the cruise is the integration of oceanographic and biological information to enhance understanding of environmental and (fish) population fluctuations, and evolutionary processes in this system. The resulting datasets and samples are an essential component of the international EU project BONUS BIO-C3 coordinated by GEOMAR. The spatial focus lay on the Bornholm Basin (the most important spawning area of Baltic cod), but also included the Western Baltic Sea, Arkona and Gotland Basin, Gdansk Deep, and Stolpe Trench. Specific investigations included a detailed hydrological survey (oxygen, salinity, temperature) of the Bornholm Basin, plankton surveys (zoo- and ichthyplankton, with the goal to determine the composition and the abundance and vertical and horizontal distribution of species, and to take samples for later measurements of nutritional condition), and pelagic fishery hauls for clupeid and gadoid fish. The latter served to determine stock structure, gonadal maturation, stomach contents, and egg production of sprat and cod, and to sample tissue for later genetic analyses and otoliths for age estimatation of individual cod. The abundance and distribution of fish species in the investigated area was also assessed with hydroacoustic methods. Additional cruise components were: (i) cod gonad sampling for histological and fecundity studies; (ii) vertically resolved phytoplankton and zooplankton sampling for studies of plankton phenology. (iii) vertically and spatially resolved sampling of protist communities for the characteriziation of community structure changes along the salinity gradient of the Baltic Sea.

Description: Chemical examination of the fermentation broth of a sponge-associated fungus Trichoderma harzinum HMS-15-3 led to the isolation of four pairs of new C13 lipid enantiomers namely harzianumols A–H (1a–4b). Their structures were elucidated on the basis of extensive spectroscopic (IR, MS, 1D, and 2D NMR) data analysis, including the modified Mosher's method for the assignment of their absolute configurations. The new compounds were evaluated for antihyperlipidemic effects in HepG2 cells.

Description: This study aimed to differentiate local and migratory spawning groups of the shortfin squid Illex argentinus caught in Brazilian waters using geometric and traditional morphometric methods and size-selective processes. The back-calculated length distributions reconstructed from daily growth increments deposited in the gladius allowed the identification of size-selective processes that may be related to different life history strategies. Landmark analysis on body shape (geometric morphometric) revealed that spawning groups presented significant ontogenetic variations in terms of body outline. In addition, traditional morphometric methods, based on multivariate analysis, associated juveniles of the expected migratory group (large size) and differentiated them from the local group individuals (small size). The changes in form, probably linked to the environmental gradients experienced by individuals throughout ontogeny, were interpreted as adaptations to improve swimming capacity. Migrant individuals have being differentiated from the smaller sizes group by body characteristics (broad fins, elongated and thicker mantle), which may increase the ability to perform long migrations.

Description: We investigated the biogeochemical constituents, microbial communities and functional genes (mcr and dsr) associated with anaerobic methane oxidation and sulfate reduction, and metabolic activities by sulfate reduction in the sulfate–methane transition zone (SMTZ) of gas-hydrate-bearing sediment of the Ulleung Basin in the East Sea. Maxima in the sulfate reduction rate (12.6 nmol cm¡3 d¡1), CO concentration (83 mM), and gene abundances of dsrA (9.1 £ 106 copies cm¡3) and mcrA (11.6 £ 106 copies cm¡3) occurred in the SMTZ. The peaks of CO consistently found in the SMTZ suggested that CO is an intermediate metabolic product related to methane oxidation. Candidate division JS1, the predominant bacterial group that comprised 59.0–63.7% of the 16S rRNA gene sequences, was recognized as an important organic carbon oxidizer. Both Marine Benthic Group D (MBGD) and Marine Benthic Group B (MBGB), which constituted 40.8–52.9 and 10.3–43.9% of the 16S rRNA gene sequences, respectively, were the dominant archaeal groups. Analysis of functional gene diversity revealed that anaerobic methanotroph-1-related phylotypes appeared to be the major CH4 oxidizer, whereas Firmicutes-like group was a predominant sulfate reducer in the 0.8 mbsf in SMTZ with low SO42¡ concentration. Overall results indicated that JS1 and two archaeal groups (MBGB and MBGD) seem to play a significant role in carbon and elements cycles in the gas-hydrate-bearing subsurface sediment of the Ulleung Basin.

Description: Arctic sea-ice loss is a leading indicator of climate change and can be attributed, in large part, to atmospheric forcing. Here, we show that recent ice reductions, weakening of the halocline, and shoaling of intermediate-depth Atlantic Water layer in the eastern Eurasian Basin have increased winter ventilation in the ocean interior, making this region structurally similar to that of the western Eurasian Basin. The associated enhanced release of oceanic heat has reduced winter sea-ice formation at a rate now comparable to losses from atmospheric thermodynamic forcing, thus explaining the recent reduction in sea-ice cover in the eastern Eurasian Basin. This encroaching “atlantification” of the Eurasian Basin represents an essential step toward a new Arctic climate state, with a substantially greater role for Atlantic inflows.

Description: As plastic waste pollutes the oceans and fish stocks decline, unseen below the surface another problem grows: deoxygenation. Breitburg et al. review the evidence for the downward trajectory of oxygen levels in increasing areas of the open ocean and coastal waters. Rising nutrient loads coupled with climate change—each resulting from human activities—are changing ocean biogeochemistry and increasing oxygen consumption. This results in destabilization of sediments and fundamental shifts in the availability of key nutrients. In the short term, some compensatory effects may result in improvements in local fisheries, such as in cases where stocks are squeezed between the surface and elevated oxygen minimum zones. In the longer term, these conditions are unsustainable and may result in ecosystem collapses, which ultimately will cause societal and economic harm.

Description: Introduction: The combination of growing antimicrobial resistance with a dry pipeline has resulted in infections that can no longer be treated. Specific reasons have led to companies’ exit from the antibacterial space, however recent incentives are spurring interest to reinvigorate the pipeline. Areas covered: This article summarizes the available information on the discovery, developmental, and regulatory challenges in antibacterial development that have led to disinterest in the space, as well as ongoing incentives such as public-private partnerships and streamlined pathways to mend these challenges and bring new antibiotics to patients in need. Expert commentary: Clinicians should not only understand the reasons for the decline in antibiotic development that have resulted in the dry pipeline, but also the ongoing initiatives in place to build an appropriate supply. Doing so will result in greater appreciation and prudent use of these life-saving drugs when they become available.

Description: Stratification of the deep Southern Ocean during the Last Glacial Maximum is thought to have facilitated carbon storage and subsequent release during the deglaciation as stratification broke down, contributing to atmospheric CO2 rise. Here, we present neodymium isotope evidence from deep to abyssal waters in the South Pacific that confirms stratification of the deepwater column during the Last Glacial Maximum. The results indicate a glacial northward expansion of Ross Sea Bottom Water and a Southern Hemisphere climate trigger for the deglacial breakup of deep stratification. It highlights the important role of abyssal waters in sustaining a deep glacial carbon reservoir and Southern Hemisphere climate change as a prerequisite for the destabilization of the water column and hence the deglacial release of sequestered CO2 through upwelling.

Description: Investigating deep water column biodiversity and ecology of the Cape Verde Islands Weekly report 21/2/2018-1/3/2018

Description: AtlantOS aims to improve ocean observing by strengthening international collaboration, sharing of ocean observing and by promoting engagement and innovation. The vision is to create together with the ocean community a coordinated, efficient, sustainable and purposeful system.

Description: GAME - Global Approach by Modular Experiments is in an international training programme that combines applied research with training for young scientists. Every year, parallel research projects on current ecological issues are organised at different locations around the world. The research is carried out by students working in bi-national pairs and supervised by scientists from GAME’s partner institutes. The unique GAME projects enable generalizable insights into urgent ecological issues. At the same time GAME links GEOMAR with numerous partner institutes worldwide and creates a global network for the sustainable exchange of scientific knowledge. In 2014, the participants investigate if microplastic is able to harm marine animals. In a short film, they report about their life and work.

Description: Auf einer Expedition mit dem deutschen Forschungsschiff POSEIDON und dem Tauchboot JAGO haben Wissenschaftler der Universität von Las Palmas de Gran Canaria (ULPGC), des Instituto Español de Oceanografía, Centro Oceanográfico de Canarias (IEO) und des GEOMAR Helmholtz-Zentrums für Ozeanforschung Kiel erstmals den untermeerischen Vulkan vor der Kanaren-Insel El Hierro mit ihren eigenen Augen untersucht. Neben Proben von Gesteinen und Flüssigkeiten aus dem Vulkankrater brachten sie einmalige Unterwasseraufnahmen mit an die Oberfläche. An international team of scientists has been investigating the active submarine volcano at El Hierro in the Canary Islands. Using a manned submersible, they have brought unique underwater footage and samples back to the surface.

Description: This paper reviews aspects of the biology of copepods infecting marine fish commercially cultured at fish farms or held as broodstock at governmental hatcheries in Japan. In total, 20 species of parasitic copepods have been reported from these fish: they are mostly caligids (12 spp.), followed by lernaeopodids (4 spp.), pennellid (1 sp.), chondracanthid (1 sp.), taeniacanthid (1 sp.), and unidentified species (1 sp.). The identified copepods are: Caligus fugu, C. lagocephalus, C. lalandei, C. latigenitalis, C. longipedis, C. macarovi, C. orientalis, C. sclerotinosus, C. spinosus, Lepeophtheirus longiventralis, L. paralichthydis, L. salmonis (Caligidae); Alella macrotrachelus, Clavella parva, Parabrachiella hugu, P. seriolae (Lernaeopodidae); Peniculus minuticaudae (Pennellidae); Acanthochondria priacanthi (Chondracanthidae); and Biacanthus pleuronichthydis (Taeniacanthidae). The fish recorded as hosts include carangids (4 spp.), sparids (2 spp.), monacanthids (2 spp.), salmonids (2 spp.), scombrid (1 sp.), tetraodontid (1 sp.), pleuronectid (1 sp.), paralichthyid (1 sp.), and trichodontid (1 sp.). Only five species (C. orientalis, L. longiventralis, L. salmonis, C. parva and A. priacanthi) parasitize farmed fish in subarctic waters, while all other species (15 spp.) infect farmed fish in temperate waters. No information is yet available on copepods from fish farmed in subtropical waters. Three species of Caligus (C. fugu, C. sclerotinosus and C. longipedis) are serious pests in aquaculture of Japanese pufferfish (Takifugu rubripes), red seabream (Pagrus major), and striped jaw (Pseudocaranx dentex), respectively. Due to its one-host life cycle that is unique among pennellids, P. minuticaudae is considered as a potentially serious pest with further development of aquaculture of its filefish hosts, threadsail filefish (Stephanolepis cirrhifer) and black scraper (Thamnaconus modestus). Infection of farmed salmonids by L. salmonis is not a serious problem in Japan

Description: Large euhedral crystals of calcium carbonate hexahydrate were recovered from a shelf basin of the Bransfield Strait, Antarctic Peninsula, at a water depth of 1950 meters and sub-zero bottom water temperatures. The chemistry, mineralogy, and stable isotope composition of this hydrated calcium carbonate phase, its environment of formation, and its mode of precipitation confirm the properties variously attributed to hypothetical precursors of the glendonites and thereby greatly expand their use in paleoceanographic interpretation.

Description: The planktonic foraminifer Globigerinoides sacculifer (Brady) was cultured under two different light intensities and in continuous darkness. High light intensity (HLI = 4oo-soo einsteins/m2/s) resulted in a longer lifespan, a greater number of chambers formed, and a larger final shell size compared with individuals cultured under low light intensity (LLI = 20-50 einsteins/m2/s) or in continuous darkness. Shell growth rates were unaffected by increasing light intensity, but gametogenesis was delayed. Continuous darkness induced a rapid onset of gametogenesis in organisms with shell lengths larger than 250 m. Feeding frequency had a greater effect on growth and reproduction than light intensity under conditions of LLI and HLI, but continuous darkness had an overriding effect on growth and reproduction owing to the rapid onset of gametogenesis which terminated the life of the mother cell. Our previous data indicated that the longevity of G. sacculifer was dependent on feeding frequency, and that G. sacculifer cultured under LLI had a lifespan of approximately 2-4 weeks. Present results suggest that the lifespan can vary from a minimum of 8 days for organisms fed daily in continuous darkness to a maximum of 54 days for organisms fed once every 7 days and maintained in HLI. It is concluded that individual G. sacculifer attain a shell size greater than 6oo ,urn only if they maintain their position in the euphotic zone. Prolonged existence below the euphotic zone would result in premature death or gametogenesis following stunted shell growth.

Description: The Soil Moisture and Ocean Salinity (SMOS) mission observes brightness temperatures at a low microwave frequency of 1.4 GHz (L-band) with a daily coverage of the polar regions. L-band radiometry has been shown to provide information on the thickness of thin sea ice. Here, we apply a new emission model that has previously been used to investigate the impact of snow on thick Arctic sea ice. The model has not yet been used to retrieve ice thickness. In contrast to previous SMOS ice thickness retrievals, the new model allows us to include a snow layer in the brightness temperature simulations. Using ice thickness estimations from satellite thermal imagery, we simulate brightness temperatures during the ice growth season 2011 in the northern Baltic Sea. In both the simulations and the SMOS observations, brightness temperatures increase by more than 20 K, most likely due to an increase of ice thickness. Only if we include the snow in the model, the absolute values of the simulations and the observations agree well (mean deviations below 3.5 K). In a second comparison, we use high-resolution measurements of total ice thickness (sum of ice and snow thickness) from an electromagnetic (EM) sounding system to simulate brightness temperatures for 12 circular areas. While the SMOS observations and the simulations that use the EM modal ice thickness are highly correlated (r2=0.95), the simulated brightness temperatures are on average 12 K higher than observed by SMOS. This would correspond to an 8-cm overestimation of the modal ice thickness by the SMOS retrieval. In contrast, if the simulations take into account the shape of the EM ice thickness distributions (r2=0.87), the mean deviation between simulated and observed brightness temperatures is below 0.1 K.

Description: Marine calcifiers as a plankton functional type (PFT) are a crucial part of the global carbon cycle, being responsible for much of the carbon export to the deep ocean entering via biological pathways. Deep ocean carbon export through calcifiers is controlled by physiological, ecological, and biogeochemical factors. This paper describes the implementation of a calcifying phytoplankton PFT in the University of Victoria Earth System Climate Model, version 2.9 (UVic ESCM), and mechanistic improvements to the representation of model carbon export (a full calcite tracer, carbonate chemistry dependent calcite dissolution rates, and a ballasting scheme). An iterative method for stabilizing and tuning the biogeochemistry is furthermore described. The UVic ESCM now fills a niche in Earth system modelling that was previously unoccupied in that it is relatively inexpensive to run, yet resolves the complete Earth system carbon cycle including prognostic calcium carbonate and a separate phytoplankton calcifier PFT. The model is now well suited to testing feedbacks between the carbonate and carbon cycles and the climate system as transient simulations. The modifications described improve the UVic ESCM's mechanistic realism without compromising performance with respect to observed carbon and nutrient fluxes. Primary production, export production, particulate organic carbon, and calcite fluxes all fall within independently observed estimates.

Description: The current state of development of an interactive electronic identification key for females of the marine pelagic microcopepod family Oncaeidae is presented. To date, 112 species have been described, allocated to seven genera (Archioncaea, Conaea, Epicalymma, Monothula, Oncaea s.str., Spinoncaea, and Triconia) and 16 species groups within the speciose paraphyletic taxon Oncaea s.l. Only two species of Oncaea s.l. show an uncertain group status. Of all described oncaeids, seven species are not yet included in the key due to inadequacies in morphological description and/or lack of type material for re-examination. In addition, seven morphologically distinct species and two new species groups are considered that have not yet been formally described. The key uses easily distinguishable morphological characters as far as possible (e.g. body size, proportional lengths of urosomites, length of P5 exopod) and includes more difficult characters (e.g. spine counts on swimming legs, proportional spine lengths) where required for unequivocal identification. The characters used in the key allow the identification of genera and species groups by investigators with limited taxonomic experience; species separation in most cases requires some advanced dissection skills. Potential identification problems caused by difficulties discerning minute morphological features or intraspecific morphometric variability are discussed. The present version of the identification key still requires complementary illustrations of character states and inclusion of fact sheets summarizing the characteristics of each species with notes on taxonomic uncertainties and links to databases providing zoogeographical and genetic information.

Description: 16.05.2015 - 30.05.2015 Physical, chemical, biological research and fishery oceanography This multidisciplinary cruise extended a long-term data series on (eco-)system composition and functioning of the Baltic Sea, with a focus on the deeper basins. The series has been collected in similar form since 1986. A key characteristic of the cruise is the integration of oceanographic and biological information to enhance understanding of environmental and (fish) population fluctuations, and evolutionary processes in this system. The resulting datasets and samples are an essential component of the international EU project BONUS BIO-C3 coordinated by GEOMAR. The spatial focus lay on the Bornholm Basin (the most important spawning area of Baltic cod), but also included the Western Baltic Sea, Arkona and Gotland Basin, Gdansk Deep, and Stolpe Trench. Specific investigations included a detailed hydrographic survey (oxygen, salinity, temperature) of the Bornholm Basin, plankton surveys (zoo- and ichthyplankton, with the goal to determine the composition and the abundance and vertical and horizontal distribution of species, and to take samples for later measurements of nutritional condition), and pelagic fishery hauls for clupeid and gadoid fish. The latter served to determine stock structure, gonadal maturation, stomach contents, and egg production of sprat and cod, and to sample tissue for later genetic analyses and otoliths for age estimatation of individual cod. The abundance and distribution of fish species in the investigated area was also assessed with hydroacoustic methods. Additional cruise components were: (i) cod gonad and liver sampling for the determination of lipid content and histological studies; (ii) vertically resolved phytoplankton and zooplankton sampling for studies of plankton phenology.

Description: Some 290 species of squids comprise the order Teuthida that belongs to the molluscan Class Cephalopoda. Of these, about 30-40 squid species have substantial commercial importance around the world. Squid fisheries make a rather small contribution to world landings from capture fisheries relative to that of fish, but the proportion has increased steadily over the last decade, with some signs of recent leveling off. The present overview describes all substantial squid fisheries around the globe. The main ecological and biological features of exploited stocks, and key aspects of fisheries management are presented for each commercial species of squid worldwide. The history and fishing methods used in squid fisheries are also described. Special attention has been paid to interactions between squid fisheries and marine ecosystems including the effects of fishing gear, the role of squid in ecosystem change induced by overfishing on groundfish, and ecosystem-based fishery management.

Description: We studied the formation of exocellular precipitates of struvite (Mg NH4PO4.6H2O) by 96 kinds of calcite‐pro‐ducing bacterial strains isolated from soil. We also studied the influence of calcium ions on struvite precipitation. The number of strains producing struvite was 20. Only four consistently formed large amounts. These results seem to indicate that the bacterial precipitation of struvite is not a general phenomenon. The strains studied were taxonomically identified, and no relationship was found between the production of struvite and the taxonomic identity of such strains. Calcium, supplied as Ca acetate in the culture medium, appeared to inhibit the biological precipitation of struvite.

Description: Changes in the formation of dense water in the Arctic Ocean and Nordic Seas [the “Arctic Mediterranean” (AM)] probably contributed to the altered climate of the last glacial period. We examined past changes in AM circulation by reconstructing radiocarbon ventilation ages of the deep Nordic Seas over the past 30,000 years. Our results show that the glacial deep AM was extremely poorly ventilated (ventilation ages of up to 10,000 years). Subsequent episodic overflow of aged water into the mid-depth North Atlantic occurred during deglaciation. Proxy data also suggest that the deep glacial AM was ~2° to 3°C warmer than modern temperatures; deglacial mixing of the deep AM with the upper ocean thus potentially contributed to the melting of sea ice, icebergs, and terminal ice-sheet margins.

Description: We deployed KOSMOS units in different climate zones and marine ecosystem types between 2011 and 2015, in order to study the influence of ocean acidification on the succession of plankton communities under in-situ conditions. Settling particulate matter within the mesocosms was quantitatively collected in sediment traps attached to the bottom of the mesocosms. We applied a low vacuum sampling strategy to empty these particle traps through silicon tubes reaching down from the sea surface outside of the mesocosm enclosures. The video shows the setup of the traps and the sample recovery from small boats attached to the KOSMOS units. The video can be downloaded from the OceanRep server (GEOMAR) but is also available on the KOSMOS channel of the streaming platform YouTube.

Description: Sea ice leads play an essential role in ocean-ice-atmosphere exchange, in ocean circulation, geochemistry and in ice dynamics. Their precise detection is crucial for altimetric estimations of sea ice thickness and volume. This study evaluates the performance of the SARAL/AltiKa altimeter to detect leads and to monitor their spatio-temporal dynamics. We show that a pulse peakiness parameter (PP) used to detect leads by Envisat RA-2 and ERS-1,-2 altimeters is not suitable because of saturation of AltiKa return echoes over the leads. The signal saturation results in loss of 6–10% of PP data over sea ice. We propose a different parameter: maximal power of waveform, and define the threshold to discriminate the leads. Our algorithm can be applied from December until May. It detects well the leads of small and medium size: from 200 m to 3–4 km. So, the combination of the high-resolution altimetric estimates with low-resolution thermal infra-red or radiometric lead fraction products could enhance the capability of remote sensing to monitor sea ice fracturing.

Description: The impact of fire on daily discharges from two mountainous basins located in the permafrost region of Eastern Siberia; the Vitimkan (969 km2) and Vitim rivers (18 200 km2), affected by fire over 78% and 49% of their areas, respectively, in 2003 was investigated. The results of hydrological and meteorological data analysis suggested that the Vitimkan River basin had a rapid and profound hydrological response to wildfire in 2003 expressed through an increased summer flow of 41% (133 mm). Conversely, the larger Vitim River basin showed no significant changes in discharges after the fire. The parameters of the process-based hydrological model Hydrograph were estimated for pre-fire conditions. The results of runoff simulations conducted for continuous pre-fire periods of 1966–2002 and 1970–2002 for the Vitimkan and Vitim River basins respectively on a daily time step showed satisfactory agreement with the observed flow series of both basins. Significant underestimation of precipitation and its poor representativeness for mountainous watersheds was revealed as the main cause of observed and simulated flow discrepancies, especially for high flood events. The set of dynamic parameters was developed based on data analysis and post-fire landscape changes as derived from a literature review. The model was applied to investigate the processes in the soil column and their effect on runoff formation during the post-fire period. The new set of model parameters implied intensification of soil thaw, reduction of infiltration rate and evapotranspiration, and increase of upper subsurface flow fraction in summer flood events following the fire. According to modelling results, the post-fire thaw depth exceeded the pre-fire thaw depth by 0.4–0.7 m. Total evapotranspiration reduced by 40% in summer months, while surface flow increased almost 2.5 times during maximum flood events.

Description: Macroalgae, especially perennial species, are exposed to a seasonally variable fouling pressure. It was hypothesized that macroalgae regulate their antifouling defense to fouling pressure. Over one year, the macrofouling pressure and the chemical anti-macrofouling defense strength of the brown algae Fucus vesiculosus and Fucus serratus were assessed with monthly evaluation. The anti-macrofouling defense was assessed by means of surface-extracted Fucus metabolites tested at near-natural concentrations in a novel in situ bioassay. Additionally, the mannitol content of both Fucus species was determined to assess resource availability for defense production. The surface chemistry of both Fucus species exhibited seasonal variability in attractiveness to Amphibalanus improvisus and Mytilus edulis. Of this variability, 50–60% is explained by a sinusoidal model. Only F. vesiculosus extracts originating from the spring and summer significantly deterred settlement of A. improvisus. The strength of macroalgal antifouling defense did not correlate either with in situ macrofouling pressure or with measured mannitol content, which, however, were never depleted.

Description: R.V. ALKOR Cruise No.: AL 457 Dates of Cruise: 16.05. – 30.05.2014 Areas of Research: Physical, chemical, biological and fishery oceanography Port Calls: Gdynia, Poland, 22.05. – 24.05.2014

Description: From January to July 2013 we deployed ten 19 m long KOSMOS units in a Swedish fjord (Gullmar Fjord, 58° 16’008 N, 11° 28’680E) close to the city of Lysekil, in order to study the influence of ocean acidification on a natural winter-to-summer succession of a plankton community under in-situ conditions. Towards the end of the study (21st of May), we mounted an underwater camera on a diving torch and slowly lowered this setup to a depth of approximately 18.5 m. A variety of different organisms (copepods, fish larvae, jelly fish) and detrital aggregates can be seen during the descent of the camera into the deep. The conical mesocosm sediment trap and particles collected in the funnel can be seen at the end of the video in 19 m water depth. The video shows that we enclosed and studied a lively plankton community within the KOSMOS system.

Description: We used our novel and programmable Porpoise Alarm (PAL, patd.) to synthesize life-like, electronic harbour porpoise communication signals based on those described for captive animals. In the Little Belt, Denmark, we employed PAL (source level 158 ± 1 dB p–p re 1 μPa@1 m; centroid frequency 133 ± 8.5 kHz) to synthesize three aggressive click train types termed “A”, “F3” and “M1” to naive, free-living harbour porpoises. Via theodolite tracking (372 h of total visual effort spread over 10 expeditions) we found that, depending on signal type, porpoises either avoid or become attracted to PAL: Signal types “A” and “F3” are slight deterrents, porpoises increasing minimum range (+23 to 32 m, respectively), whereas “M1” attracts porpoises, reducing range (by − 29 m). As determined via archival acoustic detectors (AADs), both signals “F3” and “M1” led the animals to significantly intensify their click rate (by +10% and 68%, respectively) while signal “A” led to a significant reduction ( − 59%). We propose that equipping fishing gear with PAL emitting signal “F3” could potentially reduce porpoise by-catch by increasing (1) awareness through enhanced echolocation and (2) distance to the nets. Detection probability and radius of PAL/AAD tandems could be improved by emitting signal “M1” to focus porpoise echolocation signals on the AAD. The signal may also be useful in luring animals away from hazards, which may be helpful for conservation measures prior to the onset of harmful acoustic activities such as pile-driving, seismic exploration or ammunition clearance.

Description: From January to July 2013 we deployed ten 19 m long KOSMOS units in a Swedish fjord (Gullmar Fjord, 58° 16’008 N, 11° 28’680E) close to the city of Lysekil, in order to study the influence of ocean acidification on a natural winter-to-summer succession of a plankton community under in-situ conditions. Due to floating ice sheets during winter the start of the experiment had to be delayed. Shown here are floating ice sheets hitting the mesocosms on the 9th of February, 2013. The video can be downloaded but it is also available on the streaming platform YouTube

Description: Rarity of species is often considered to set priorities for biodiversity conservation. Less abundant species are expected to be at higher risk of extinction and make significant contribution to food web functioning. However, the relationship between species abundance and position in food webs is still unclear. Here we tested possible correlations between species abundance and structural position in Prince William Sound food web. Species abundance was inferred from biomass data and structural position was characterized by 13 centrality indices. We found that less abundant species have higher trophic positions and display more generalist feeding strategies. However, positive correlations link most of the centrality indices to population size. Thus, being locally rare translates into more peripheral food web positions and implies marginal roles in the spread of indirect effects. Species characterized by largest population size are responsible for the transfer of largest amounts of biomass and regulate the transmission of indirect effects. Less abundant species are of marginal structural importance and are exposed to impacts mediated by larger populations. In Prince William Sound ecosystem, rarity is associated with critical food web positions and does not simply reflect a marginal contribution to biodiversity. We suggest that knowing the food web position of rare species might help to formulate more effective, system-level solutions for their conservation, rather than simply focusing on the direct treatment of symptoms.

Description: 15.04.2015 - 29.04.2015

Description: In May 2011 we deployed nine 25 m long KOSMOS units for 5 weeks in a Norwegian fjord (Raunefjord, 60.265°N, 5.205°E) close to the city of Bergen, in order to study the influence of ocean acidification on the succession of a plankton community under in-situ conditions. Towards the end of the study (7th of June), we mounted an underwater camera on a diving torch and slowly lowered this setup to a depth of approximately 24.5 m. A variety of different organisms (copepods, fish larvae, jelly fish, appendicularians) and detrital aggregates can be seen during the descent of the camera into the deep. The conical mesocosm sediment trap and particles collected in the funnel can be seen at the end of the video in 25 m water depth. The video shows that we enclosed and studied lively plankton communities within the KOSMOS system. The video can be downloaded on OceanRep but is also available on the KOSMOS channel of the streaming platform YouTube.

Description: Density distribution of the common infaunal bivalves, Macoma balthica and Cerastoderma edule, was studied along the Murman Coast of the Barents Sea during 2002–2010. In both species, abundance was generally higher in West Murman in contrast to East Murman. Highest density of Macoma balthica reaching 1535 ind. m−2 was observed in the Kola Inlet. Cerastoderma edule was less abundant; its density rarely exceeded 10 ind. m−2 in all but one site, where 282 ind. m−2 was registered. Reconstruction of abundance distribution across the European geographic range of Macoma balthica revealed that it does not match an ‘abundant-centre’ pattern, having features of ramped north. On the other hand, distribution of Cerastoderma edule abundance across the range generally follows an ‘abundant-centre’ pattern but southern edge populations show relatively higher abundances as compared with those at the north edge (the Barents Sea).

Description: Investigations of submarine massive sulfides (SMS) are, at present, strongly limited due to the technologies available. Conventional detection of SMS deposits relies on water column plume detection of seafloor hydrothermal venting and seafloor morphological observations. These methods are generally confined to known regions where SMS are currently forming and where these deposits have a surface expression. Within this cruise we aim to test existing and new electromagnetic instrumentation, which detects and characterizes SMS deposits based on their associated electrical conductivity anomaly. This technology will allow us to detect sedimented deposits and potentially much larger SMS deposits which have completed their formation cycle, but have no surface expression. We tested the technologies on partially sedimented SMS deposits on the Palinuro volcanic complex situated in the Marsili back-arc basin. This region has been mapped in detail, SMS deposits have been drilled and drill cores are available at Geomar such that electrical conductivity of the particular units may be determined. The geological background information thus allows us to calibrate and ground truth the electromagnetic measurements. The development of the technology we are testing is funded through the funded EU proposal ‘Blue Mining’ and scheduled to be used on the TAG SMS deposit on the Mid-Atlantic Ridge at 26°N in 2016 as an example for resource assessment technology.

Description: This review covers 214 marine natural compounds and 23 of their synthetic analogs, which were discovered and/or synthesized from mid-2009 to August 2014. The antifouling (AF) compounds reported have medium to high bioactivity (with a threshold of EC(50) 〈 15.0 mg ml(-1)). Among these compounds, 82 natural compounds were identified as new structures. All the compounds are marine-derived, demonstrating that marine organisms are prolific and promising sources of natural products that may be developed as environmentally friendly antifoulants. However, this mini-review excludes more than 200 compounds that were also reported as AF compounds but with rather weak bioactivity during the same period. Also excluded are terrestrial-derived AF compounds reported during the last five years. A brief discussion on current challenges in AF compound research is also provided to reflect the authors' own views in terms of future research directions.

Description: Practical course at sea for students of Biological Oceanography (MNF-bioc-301 ALKOR cruise)

Description: The White Shrimp (Litopenaeus vannamei) is reared in several types of systems. Changes in pH in some can produce sub-lethal effects that result in poor growth and survival. The aim of the present study was to detennine the acidic and basic pH 50% lethal limits after 96 h exposure (pH50_96 h) and to evaluate the sub-lethal effects of pH on oxidative stress parameters in juvenile L. vannamei. The experimental design comprised nine treatments with three replications of each. The nine treatments consisted of pH 10.5, 10.0, 9.5, 9.0, 7.0, 5.0, 4.5, 4.0 and 3.5. The treatment at 7.0 was used as the control. The sub~lethal pH tests were: basic pH 9.5, neutral pH 7.0 (control) and acidio pH 4.5. For each experimental pH and sampling point, the hemolymph of six shrimp was collected to determine catalase and glutathione S-transferase's activities and total antioxidant capacity. The values of lethat pH50 at 24, 48, 72 and 96 h for juvenile L. vannamei had basic pH values equal to 9.82, 9.62, 9.59 and 9.58 and acidic pH values of 3.86, 3.92, 3.94 and 4.04, respectively. The shrimp exposed to basic and acidic pH levels showed antioxidant responses with changes in antioxidant activity.

Description: Illex illecebrosus squid appear to have a species‐typical and internally organized spatial arrangement of their groups. Squid maintained an average angle of 25° with respect to their nearest neighbour, and mostly had angular deviations between 5° and 20°. They maintained distances to nearest, second and third neighbours in a ratio of 1:1.5:2. The distances were strongly affected by group size (4, 20, or 38), with larger groups maintaining closer distances. Interindividual distances were not affected by two variables, day‐night and presence of a current in the large pool in which they were kept. The similarity of this organization to that of fish schools is discussed.

Description: There are many kinds of squid and cuttlefish in the oceans of the world, and the stock sizes of some are presumed to be large. However, few attempts have been made to quantitatively assess standing stocks. In Japan, the commercial yield ranges from 400,000 to 900,000 metric tons annually, accounting for about 50 to 80% of the total cephalopod catch in the world. Jigging surveys have been conducted since 1971 in the Sea of Japan and since 1973 in the Pacific Ocean off Japan. Their purpose has been to assess the abundance of oceanic squid. The stock size index (N) and the density index (F) for Todarodes pacificus, Ommastrephes bartrami, and Onychoteuthis borealijaponica were calculated for the Pacific from 1968 to 1979 and for the Sea of Japan from 1971 to 1979. N and F correspond reasonably well to periodic changes in the annual yield (Y) of T. pacificus in the Pacific and the Sea of Japan. Since Y is presumed to correspond well to abundance, the results of these surveys give rough estimates of T. pacificus abundance. Changes in N and F for O. bartrami and O. borealijaponica do not show good correspondence with Y, probably because the study area covers only a part of the range of the two species.