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  • Articles  (1,680)
  • Other Sources  (380)
  • Springer  (1,640)
  • MDPI  (356)
  • Blackwell Publishing Ltd
  • National Academy of Sciences
  • 2020-2024  (2,060)
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  • Books  (358)
  • Articles  (1,680)
  • Other Sources  (380)
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  • 1
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    Marine Mikroorganismen für den Plastikabbau (2022)
    Springer
    Details
    Publication Date: 2023-01-04
    Description: Millions of tons of plastic waste are released into the marine environment every year. While they steadily accumulate, synthetic polymers provide a habitat for microorganisms. This denominated Plastisphere has been studied in detail over the past ten years. So have the enzymes responsible for microbial degradation, which are unfortunately lacking for most sorts of plastics. Therefore, the BMBF-funded project PLASTISEA is focusing on bioprospecting the marine treasure trove for novel plastic acting enzymes.
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  • 2
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    Cross-domain fusion in smart seafloor sensor networks (2022)
    Springer
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    Publication Date: 2023-01-04
    Description: Many of the socio-economic and environmental challenges of the 21st century like the growing energy and food demand, rising sea levels and temperatures put stress on marine ecosystems and coastal populations. This requires a significant strengthening of our monitoring capacities for processes in the water column, at the seafloor and in the subsurface. However, present-day seafloor instruments and the required infrastructure to operate these are expensive and inaccessible. We envision a future Internet of Underwater Things, composed of small and cheap but intelligent underwater nodes. Each node will be equipped with sensing, communication, and computing capabilities. Building on distributed event detection and cross-domain data fusion, such an Internet of Underwater Things will enable new applications. In this paper, we argue that to make this vision a reality, we need new methodologies for resource-efficient and distributed cross-domain data fusion. Resource-efficient, distributed neural networks will serve as data-analytics pipelines to derive highly aggregated patterns of interest from raw data. These will serve as (1) a common base in time and space for fusion of heterogeneous data, and (2) be sufficiently small to be transmitted efficiently in resource-constrained settings.
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  • 3
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    Fusion seismischer, akustischer und optischer Unterwasserdaten und Modelle zur Analyse submariner Hangrutschungen an Vulkansystemen (2022)
    Springer
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    Publication Date: 2023-01-04
    Description: Die Messung submariner Bodendeformationen an den Flanken von Inselvulkanen hilft dabei, ihre Stabilität und die Gefahr von Hangrutschungen einzuschätzen, ist aber inherent schwierig für Gebiete, die unter Wasser liegen. Wiederholte Seismik- oder Fächerecholot-Vermessungen können größere Gebiete abdecken, aber Auflösung und Lokalisierung sind bestimmten Grenzen unterworfen. Optische Daten andererseits sind besser aufgelöst, aber limitiert in ihrer räumlichen Abdeckung, und Meeresbodengeodäsie wiederum liefert nur punktuelle Information. In diesem Artikel schlagen wir vor, verschiedene Arten von Fernerkundungsdaten zusammenzubringen und auch mit bestehenden statischen und dynamischen Modellen zu verschneiden. Aufgrund ihrer verschiedenen Modalitäten, Unsicherheiten und Skalierungen ist dies jedoch schwierig und bedarf einer Fusion. Zusammen mit anderen Aspekten (Erdbeben, Strömungen etc.) sollen die fusionierten Daten und Modelle langfristig neue Einblicke in das dynamische System des sich verändernden Meeresbodens, die dafür verantwortlichen Faktoren sowie die Auswirkungen instabiler submariner Hänge auf andere Meeressysteme bieten.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 4
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    Getting the big picture in cross-domain fusion (2022)
    Springer
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    Publication Date: 2023-01-04
    Description: A central promise of cross-domain fusion (CDF) is the provision of a “bigger picture” that integrates different disciplines and may span very different levels of detail. We present a number of settings that call for this bigger picture, with a particular focus on how information from several domains can be made easily accessible and visualizable for different stakeholders. We propose harnessing an approach that is now well established in interactive maps, which we refer to as the “Google maps approach” (Google LLC, Mountain View, CA, USA), which combines effective filtering with intuitive user interaction. We expect this approach to be applicable to a range of CDF settings.
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  • 5
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    A Data-Centric Approach for Improving Ambiguous Labels with Combined Semi-supervised Classification and Clustering (2022)
    Springer
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    Publication Date: 2023-01-02
    Description: Consistently high data quality is essential for the development of novel loss functions and architectures in the field of deep learning. The existence of such data and labels is usually presumed, while acquiring high-quality datasets is still a major issue in many cases. Subjective annotations by annotators often lead to ambiguous labels in real-world datasets. We propose a data-centric approach to relabel such ambiguous labels instead of implementing the handling of this issue in a neural network. A hard classification is by definition not enough to capture the real-world ambiguity of the data. Therefore, we propose our method “Data-Centric Classification & Clustering (DC3)” which combines semi-supervised classification and clustering. It automatically estimates the ambiguity of an image and performs a classification or clustering depending on that ambiguity. DC3 is general in nature so that it can be used in addition to many Semi-Supervised Learning (SSL) algorithms. On average, our approach yields a 7.6% better F1-Score for classifications and a 7.9% lower inner distance of clusters across multiple evaluated SSL algorithms and datasets. Most importantly, we give a proof-of-concept that the classifications and clusterings from DC3 are beneficial as proposals for the manual refinement of such ambiguous labels. Overall, a combination of SSL with our method DC3 can lead to better handling of ambiguous labels during the annotation process. (Source code is available at https://github.com/Emprime/dc3).
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  • 6
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    Activity-Based Screening of Metagenomic Fosmid Libraries for Hydrogen-Uptake Enzymes (2023)
    Springer
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    Publication Date: 2023-01-19
    Description: Here, we outline how to identify hydrogenase enzymes from metagenomic fosmid libraries through an activity-based screening approach. A metagenomic fosmid library is constructed in E. coli and the fosmids are transferred into a hydrogenase deletion mutant of Shewanella oneidensis MR-1 (ΔhyaB) via triparental mating. If a fosmid clone exhibits hydrogen-uptake activity, S. oneidensis’ phenotype is restored and hydrogenase activity is indicated by a color change of the medium from yellow to colorless. The screen enables screening of 48 metagenomic fosmid clones in parallel.
    Type: Book chapter , NonPeerReviewed , info:eu-repo/semantics/bookPart
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  • 7
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    Insights into Gas Hydrate Dynamics from 3D Seismic Data, Offshore Mauritania (2022)
    Springer
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    Publication Date: 2023-01-19
    Description: The gas hydrate system off Mauritania is characterized by the undulating landward termination of a gas hydrate-related bottom simulating reflector (BSR). Some of the most landward sections of this BSR reach up to within 6 m of the seafloor. This suggests a shallow sulphate-methane-interface over an unusually large area. We attribute this to the presence of large amounts of methane due to the efficient burial of organic matter in a high-productivity oceanographic region, and the efficient channelling of methane along permeable turbidite beds towards the feather edge of the gas hydrate stability zone. This is consistent with the observation of steps in the BSR, where it cross-cuts other inferred permeable horizons. The high thermal conductivity of a salt dome in the southern part of the study area distorts the subsurface temperature field, giving the base of the hydrate stability zone a concave-down shape. Within this anticline of the BSR, high amplitudes and a horizontal reflection that crosses the sedimentary strata indicate the entrapment of free gas. We interpret this as a direct indication of a reduced hydraulic permeability of the hydrate-bearing sediment.
    Type: Book chapter , NonPeerReviewed
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  • 8
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    Gemini connector: Interfacing differentiable physical models and neural networks (2022)
    Springer
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    Publication Date: 2023-01-24
    Description: Spectacular advances have been made in the field of machine vision over the past decade. While this discipline is traditionally driven by geometric models, neural networks have proven to be superior in some applications and have significantly expanded the limits of what is possible. At the same time, conventional graphic models describe the relationship between images and the associated scene with textures and light in a physically realistic manner and are an important part of photogrammetry. Differential renderers combine these approaches by enabling gradient-based optimization in fixed structures of a graphics pipeline and thus adapt the learning process of neural networks. This fusion of formalized knowledge and machine learning motivates the idea of a modular differentiable renderer in which physical and statistical models can be recombined depending on the use case. We therefore present Gemini Connector: an initiative for the modular development and combination of differentiable physical models and neural networks. We examine opportunities and problems and motivate the idea with the extension of a differentiable rendering pipeline to include models of underwater optics for the analysis of deep sea images. Finally, we discuss use cases, especially within the Cross-Domain Fusion initiative.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 9
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    Modularizing Earth system models for interactive simulation (2022)
    Springer
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    Publication Date: 2023-02-02
    Description: Interactive exploration of Earth system simulations may have great potential to improve the scientific modeling process. It will allow monitoring of the state of the simulation via dashboards presenting real-time diagnostics within a digital twin world. We present the state of the art for Earth system modeling in this context. Cross-domain data handling and fusion will make it possible to integrate model and observation data in the context of digital twins of the ocean. Domain-driven modularization of monolithic Earth system models allows one to recover interfaces for such a cross-domain fusion. Reverse engineering with static and dynamic analysis enables modularization of Earth system models. The modularization does not only help with restructuring existing Earth system models, it also makes it possible to integrate additional scientific domains into the interactive simulation environment.
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  • 10
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    Design of Fungal Co‐Cultivation Based on Comparative Metabolomics and Bioactivity for Discovery of Marine Fungal Agrochemicals (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: Microbial co‐cultivation is employed for awakening silent biosynthetic gene clusters (BGCs) to enhance chemical diversity. However, the selection of appropriate partners for co‐cultivation remains a challenge. Furthermore, competitive interactions involving the suppression of BGCs or upregulation of known, functional metabolite(s) during co‐cultivation efforts is also common. Herein, we performed an alternative approach for targeted selection of the best co‐cultivation pair. Eight marine sediment‐derived fungi were classified as strong or weak, based on their anti‐phytopathogenic potency. The fungi were co‐cultured systematically and analyzed for their chemical profiles and anti-phytopathogenic activity. Based on enhanced bioactivity and a significantly different metabolite profile including the appearance of a co‐culture specific cluster, the co‐culture of Plenodomus influorescens (strong) and Pyrenochaeta nobilis (weak) was prioritized for chemical investigation. Large‐scale co‐cultivation resulted in isolation of five polyketide type compounds: two 12‐membered macrolides, dendrodolide E (1) and its new analog dendrodolide N (2), as well as two rare azaphilones spiciferinone (3) and its new analog 8a-hydroxy-spiciferinone (4). A well‐known bis‐naphtho‐γ‐pyrone type mycotoxin, cephalochromin (5), whose production was specifically enhanced in the co-culture, was also isolated. Chemical structures of compounds 1–5 were elucidated by NMR, HRMS and [] 20/D analyses. Compound 5 showed the strongest anti‐phytopathogenic activity against Xanthomonas campestris and Phytophthora infestans with IC50 values of 0.9 and 1.7 µg/mL, respectively.
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  • 11
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    Monthly to seasonal prediction of tropical Atlantic sea surface temperature with statistical models constructed from observations and data from the Kiel Climate Model (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: We explore the predictability of tropical Atlantic sea surface temperature (SST) and the potential influence of climate model bias on SST predictions over the tropical Atlantic. Two statistical methods are used to examine the skill in forecasting tropical Atlantic SST anomalies (SSTAs): linear inverse modeling (LIM) and analogue forecast (AF). The statistical models are trained either with observations or with data from two control integrations of the Kiel Climate Model (KCM), which only differ with respect to the resolution of its atmospheric component. Observed SSTAs suggest that Tropical Atlantic climatic changes are potentially predictable at lead times of up to 6 months over large parts of the Tropical Atlantic. The SSTAs from the KCM version employing a high-resolution atmosphere model (KCM-HRES) is potentially predictable at a level comparable to that derived from the observations, whereas the SSTAs from the KCM version employing a low-resolution atmosphere model (KCM-LRES) is considerably less potentially predictable. We show that the enhanced potential predictability in the former KCM version can be very likely related to the improved representation of ENSO-like dynamics and its seasonality. We used the statistical models in true forecast mode, i.e. the prediction schemes were trained from data independent of the forecast period. Using observed SSTAs to train the LIM yields significant skill in forecasting observed SSTAs at lead times of up to 4 months across all calendar months, which is mostly restricted to the northern and equatorial western Tropical Atlantic. Similar patterns, but with lower skill, are found when the models’ SSTAs are used, in which LIM trained with the KCM-HRES generally yields higher skills than that from the KCM-LRES. Applying AF yields significant skills in predicting observed SSTAs over the same regions, but the forecast skills are considerably smaller. When the SSTAs together with either sea level pressure (SLP) anomalies or dynamic sea level (DSL) anomalies from the KCM are used to construct the statistical models, the prediction of observed equatorial Atlantic SSTAs can be improved, with significant skill enhancement at lead times of up to 4 months in limited regions. An optimal initial SSTA pattern is found, which results in the largest transient anomaly growth over the entire domain. Independent of external forces, this amplification is developed internally; meaning that the seasonal forecast might be more sensitive to initial conditions than currently thought.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 12
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    Combining 3D seismics, eyewitness accounts and numerical simulations to reconstruct the 1888 Ritter Island sector collapse and tsunami (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: The 1888 Ritter Island volcanic sector collapse triggered a regionally damaging tsunami. Historic eyewitness accounts allow the reconstruction of the arrival time, phase and height of the tsunami wave at multiple locations around the coast of New Guinea and New Britain. 3D seismic interpretations and sedimentological analyses indicate that the catastrophic collapse of Ritter Island was preceded by a phase of deep-seated gradual spreading within the volcanic edifice and accompanied by a submarine explosive eruption, as the volcanic conduit was cut beneath sea level. However, the potential impact of the deep-seated deformation and the explosive eruption on tsunami genesis is unclear. For the first time, it is possible to parameterise the different components of the Ritter Island collapse with 3D seismic data, and thereby test their relative contributions to the tsunami. The modelled tsunami arrival times and heights are in good agreement with the historic eyewitness accounts. Our simulations reveal that the tsunami was primarily controlled by the displacement of the water column by the collapsing cone at the subaerial-submarine boundary and that the submerged fraction of the slide mass and its mobility had only a minor effect on tsunami genesis. This indicates that the total slide volume, when incorporating the deep-seated deforming mass, is not directly scalable for the resulting tsunami height. Furthermore, the simulations show that the tsunamigenic impact of the explosive eruption energy during the Ritter Island collapse was only minor. However, this relationship may be different for other volcanogenic tsunami events with smaller slide volumes or larger magnitude eruptions, and should not be neglected in tsunami simulations and hazard assessment.
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  • 13
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    Investigating the role of faults in fluid migration and gas hydrate formation along the southern Hikurangi Margin, New Zealand (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: The Hikurangi Margin off the east coast of the North Island (Te Ika-a-Māui) is a tectonically active subduction zone and the location of New Zealand’s largest gas hydrate province. Faults are internally complex volumetric zones that may play a significant role in the migration of fluids beneath the seafloor. The combined processes of deformation and fluid migration result in the formation of concentrated hydrate accumulations along accretionary ridges. It is not fully understood to what extent faults control fluid migration along the Hikurangi Margin, and whether deep-seated thrust faults provide a pathway for thermogenic gas to migrate up from sources at depth. Using 2D models based on seismic data from the region we investigated the role of thrust faults in facilitating fluid migration and contributing to the formation of concentrated gas hydrates. By altering permeability properties of the fault zones in these transient state models we can determine whether faults are required to act as fluid flow pathways. In this study we focus on two study sites offshore southern Wairarapa, using realistic yet simplified fault geometries derived from 2D seismic lines. The results of these models allow us to start to disentangle the complex relationship between fault zone structure, permeability, geometry, fluid migration and gas hydrate formation. Based on the model outputs we propose that faults act as primary pathways facilitating fluid migration and are critical in the formation of concentrated gas hydrate deposits.
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  • 14
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    Pyrenosetin D, a New Pentacyclic Decalinoyltetramic Acid Derivative from the Algicolous Fungus Pyrenochaetopsis sp. FVE-087 (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: The fungal genus Pyrenochaetopsis is commonly found in soil, terrestrial, and marine environments, however, has received little attention as a source of bioactive secondary metabolites so far. In a recent work, we reported the isolation and characterization of three new anticancer decalinoyltetramic acid derivatives, pyrenosetins A-C, from the Baltic Fucus vesiculosus-derived endophytic fungus Pyrenochaetopsis sp. FVE-001. Herein we report a new pentacyclic decalinoylspirotetramic acid derivative, pyrenosetin D (1), along with two known decalin derivatives wakodecalines A (2) and B (3) from another endophytic strain Pyrenochaetopsis FVE-087 isolated from the same seaweed and showed anticancer activity in initial screenings. The chemical structures of the purified compounds were elucidated by comprehensive analysis of HR-ESIMS, FT-IR, [a]D, 1D and 2D NMR data coupled with DFT calculations of NMR parameters and optical rotation. Compounds 1-3 were evaluated for their anticancer and toxic potentials against the human malignant melanoma cell line (A-375) and the non-cancerous keratinocyte cell line (HaCaT). Pyrenosetin D (1) showed toxicity towards both A-375 and HaCaT cells with IC50 values of 77.5 and 39.3 μM, respectively, while 2 and 3 were inactive. This is the third chemical study performed on the fungal genus Pyrenochaetopsis and the first report of a pentacyclic decalin ring system from the fungal genus Pyrenochaetopsis.
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  • 15
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    Discovery of widely available abyssal rock patches reveals overlooked habitat type and prompts rethinking deep-sea biodiversity (2020)
    National Academy of Sciences
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    Publication Date: 2023-02-08
    Description: Habitat heterogeneity and species diversity are often linked. On the deep seafloor, sediment variability and hard-substrate availability influence geographic patterns of species richness and turnover. The assumption of a generally homogeneous, sedimented abyssal seafloor is at odds with the fact that the faunal diversity in some abyssal regions exceeds that of shallow-water environments. Here we show, using a ground-truthed analysis of multibeam sonar data, that the deep seafloor may be much rockier than previously assumed. A combination of bathymetry data, ruggedness, and backscatter from a trans-Atlantic corridor along the Vema Fracture Zone, covering crustal ages from 0 to 100 Ma, show rock exposures occurring at all crustal ages. Extrapolating to the whole Atlantic, over 260,000 km2 of rock habitats potentially occur along Atlantic fracture zones alone, significantly increasing our knowledge about abyssal habitat heterogeneity. This implies that sampling campaigns need to be considerably more sophisticated than at present to capture the full deep-sea habitat heterogeneity and biodiversity.
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  • 16
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    Aquatic biosecurity remains a damp squib (2020)
    Springer
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    Publication Date: 2023-02-08
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  • 17
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    Deepening of Future Aleutian Low in Ensemble Global Warming Simulations with the Kiel Climate Model (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: We project changes of the Aleutian Low (AL) under global warming using ensemble simulations with a fully coupled ocean-atmosphere-sea ice model, the Kiel Climate Model (KCM). In the global warming simulations, the carbon dioxide (CO2) concentration increases by 1% per year from the preindustrial level of 286.2 ppm to a quadruple value in 140 years. Results from the 40 members of an ensemble simulation show an intensification of the AL such that ensemble mean North Pacific Index (NPI) is decreased by 2.71 hPa. It is also accompanied with an expansion of the AL to north. While the effect of weakened land-ocean thermal contrast and SST warming in the eastern tropical Pacific on the AL strength are relatively weak and marginally significant, sea ice loss in the marginal seas of the North Pacific, such as the Bering Sea and the Sea of Okhotsk, increases the surface air temperature and makes pressure lower over the Bering Sea and the Aleutian Islands. Especially, sea ice loss in the Okhotsk Sea drives the SLP change around the Aleutian Islands and contributes to the strengthening of the AL.
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  • 18
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    Intracellular pH regulation in mantle epithelial cells of the Pacific oyster, Crassostrea gigas (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: Shell formation and repair occurs under the control of mantle epithelial cells in bivalve molluscs. However, limited information is available on the precise acid–base regulatory machinery present within these cells, which are fundamental to calcification. Here, we isolate mantle epithelial cells from the Pacific oyster, Crassostrea gigas and utilise live cell imaging in combination with the fluorescent dye, BCECF-AM to study intracellular pH (pHi) regulation. To elucidate the involvement of various ion transport mechanisms, modified seawater solutions (low sodium, low bicarbonate) and specific inhibitors for acid–base proteins were used. Diminished pH recovery in the absence of Na+ and under inhibition of sodium/hydrogen exchangers (NHEs) implicate the involvement of a sodium dependent cellular proton extrusion mechanism. In addition, pH recovery was reduced under inhibition of carbonic anhydrases. These data provide the foundation for a better understanding of acid–base regulation underlying the physiology of calcification in bivalves.
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  • 19
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    Seismic Reflection Methods in Offshore Groundwater Research (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: There is growing evidence that passive margin sediments in offshore settings host large volumes of fresh and brackish water of meteoric origin in submarine sub-surface reservoirs. Marine geophysical methods, in particular seismic reflection data, can help characterize offshore hydrogeological systems and yet the existing global database of industrial basin wide surveys remains untapped in this context. In this paper we highlight the importance of these data in groundwater exploration, by reviewing existing studies that apply physical stratigraphy and morpho-structural interpretation techniques to provide important information on—reservoir (aquifer) properties and architecture, permeability barriers, paleo-continental environments, sea-level changes and shift of coastal facies through time and conduits for water flow. We then evaluate the scientific and applied relevance of such methodology within a holistic workflow for offshore groundwater research.
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  • 20
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    Metal Distribution and Sediment Quality Variation across Sediment Depths of a Subtropical Ramsar Declared Wetland (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: The study of wetlands is particularly important as these systems act as natural water purifiers and thus can act as sinks for contaminated particles. Wetland sediments are important as they provide an indication of potential contamination across temporal and spatial scales. The current study aimed to investigate the distributions of selected metals and nutrients in different sites in relation to sediment depth, and identify relationships among sediment metals. Significant differences in nutrient (i.e., N, P) and metal (i.e., K, Mg, Na, Fe, Cu, B) concentrations were found across study sites, whereas nutrients (i.e., N, P) and metals (i.e., Ca, Mg, Fe, Cu, Zn) were significantly different with sediment depths. When compared against Canadian sediment standards, most of the assessed metals were within the “no effect” level across the different sites and depths. The K, Ca, and Mg concentration showed extreme contamination across all sites and depths. The enrichment factor values for K, Ca, and Mg showed extremely high enrichment levels for all sites and sediment depths. The Na, Mn, Fe, Cu, Zn, and B concentration showed mostly background enrichment levels. All sediments across the different sites and sediment depths indicated deterioration of sediment quality. Pearson correlations suggest that most metals might have originated in a similar source as that of Mn and B, owing to a lack of significant differences. These results provide baseline information for the general management of the Nylsvley Wetland in relation to sediment metal pollution. The specific sources of metal contaminants also require further elucidation to further inform management efforts.
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  • 21
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    Geomorphology of Canyon Outlets in Zrmanja River Estuary and Its Effect on the Holocene Flooding of Semi-enclosed Basins (the Novigrad and Karin Seas, Eastern Adriatic) (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: Detailed multi-beam bathymetry, sub-bottom acoustic, and side-scan sonar observations of submerged canyons with tufa barriers were used to characterize the Zrmanja River karst estuary on the eastern Adriatic coast, Croatia. This unique karst environment consists of two submerged karst basins (Novigrad Sea and Karin Sea) that are connected with river canyons named Novsko Ždrilo and Karinsko Ždrilo. The combined use of high-resolution geophysical data with legacy topography and bathymetry data in a GIS environment allowed for the description and interpretation of this geomorphological setting in relation to the Holocene sea-level rise. The tufa barriers had a predominant influence on the Holocene flooding dynamics of the canyons and karst basins. Here, we describe the possible river pathways from the basins during the lowstand and the formation of a lengthening estuary during the Holocene sea-level rise. Based on the analyzed morphologies and the relative sea-level curve for the Adriatic Sea, the flooding of the Novsko Ždrilo occurred 9200 years before present (BP) and Karinsko Ždrilo was flooded after 8400 years BP. The combination of high-resolution geophysical methods gave an accurate representation of the karst estuarine seafloor and the flooding of semi-isolated basins due to sea-level rise.
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  • 22
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    Natural variability of the Arctic Ocean sea ice during the present interglacial (2020)
    National Academy of Sciences
    Details
    Publication Date: 2023-02-08
    Description: The impact of the ongoing anthropogenic warming on the Arctic Ocean sea ice is ascertained and closely monitored. However, its long-term fate remains an open question as its natural variability on centennial to millennial timescales is not well documented. Here, we use marine sedimentary records to reconstruct Arctic sea-ice fluctuations. Cores collected along the Lomonosov Ridge that extends across the Arctic Ocean from northern Greenland to the Laptev Sea were radiocarbon dated and analyzed for their micropaleontological and palynological contents, both bearing information on the past sea-ice cover. Results demonstrate that multiyear pack ice remained a robust feature of the western and central Lomonosov Ridge and that perennial sea ice remained present throughout the present interglacial, even during the climate optimum of the middle Holocene that globally peaked ∼6,500 y ago. In contradistinction, the southeastern Lomonosov Ridge area experienced seasonally sea-ice-free conditions, at least, sporadically, until about 4,000 y ago. They were marked by relatively high phytoplanktonic productivity and organic carbon fluxes at the seafloor resulting in low biogenic carbonate preservation. These results point to contrasted west–east surface ocean conditions in the Arctic Ocean, not unlike those of the Arctic dipole linked to the recent loss of Arctic sea ice. Hence, our data suggest that seasonally ice-free conditions in the southeastern Arctic Ocean with a dominant Arctic dipolar pattern, may be a recurrent feature under “warm world” climate.
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    Closely Related Vibrio alginolyticus Strains Encode an Identical Repertoire of Caudovirales-Like Regions and Filamentous Phages (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Many filamentous vibriophages encode virulence genes that lead to the emergence of pathogenic bacteria. Most genomes of filamentous vibriophages characterized up until today were isolated from human pathogens. Despite genome-based predictions that environmental Vibrios also contain filamentous phages that contribute to bacterial virulence, empirical evidence is scarce. This study aimed to characterize the bacteriophages of a marine pathogen, Vibrio alginolyticus (Kiel-alginolyticus ecotype) and to determine their role in bacterial virulence. To do so, we sequenced the phage-containing supernatant of eight different V. alginolyticus strains, characterized the phages therein and performed infection experiments on juvenile pipefish to assess their contribution to bacterial virulence. We were able to identify two actively replicating filamentous phages. Unique to this study was that all eight bacteria of the Kiel-alginolyticus ecotype have identical bacteriophages, supporting our previously established theory of a clonal expansion of the Kiel-alginolyticus ecotype. We further found that in one of the two filamentous phages, two phage-morphogenesis proteins (Zot and Ace) share high sequence similarity with putative toxins encoded on the Vibrio cholerae phage CTXΦ. The coverage of this filamentous phage correlated positively with virulence (measured in controlled infection experiments on the eukaryotic host), suggesting that this phage contributes to bacterial virulence.
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    Bdellovibrio and Like Organisms Are Predictors of Microbiome Diversity in Distinct Host Groups (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: Biodiversity is generally believed to be a main determinant of ecosystem functioning. This principle also applies to the microbiome and could consequently contribute to host health. According to ecological theory, communities are shaped by top predators whose direct and indirect interactions with community members cause stability and diversity. Bdellovibrio and like organisms (BALOs) are a neglected group of predatory bacteria that feed on Gram-negative bacteria and can thereby influence microbiome composition. We asked whether BALOs can predict biodiversity levels in microbiomes from distinct host groups and environments. We demonstrate that genetic signatures of BALOs are commonly found within the 16S rRNA reads from diverse host taxa. In many cases, their presence, abundance, and especially richness are positively correlated with overall microbiome diversity. Our findings suggest that BALOs can act as drivers of microbial alpha-diversity and should therefore be considered candidates for the restoration of microbiomes and the prevention of dysbiosis.
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    Discovery of numerous pingos and comet-shaped depressions offshore southwestern Taiwan (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: High-resolution bathymetry collected with an autonomous underwater vehicle (AUV) along the flanks of three ridges of the accretionary prism offshore southwestern (SW) Taiwan revealed more than 650 elongated depressions in water depths ranging from 1155 to 1420 m. The depressions are between 12 and 129 m long, 5 to 70 m wide, and up 9 m deep at their center and shallowing downslope to about 1-m depth. Due to their shape in downslope cross section, they are termed comet-shaped depressions (CSD). The CSD occur in patches of more than 100 with densities of 53 to 98 CSD/km2. In addition, seven topographic mounds were mapped and interpreted as pingos, which remotely operate vehicle (ROV) observations and sampling show to be covered with authigenic carbonate. These features overlie areas where multichannel seismic reflection (MCS) profiles show bottom simulating reflectors (BSR) and dipping strata extending from below the BSR to near the seafloor. We consider comet-shaped depression, a new type of pockmark, forms on a sloping seafloor where fluids expulsion occurred. We also suggest that the two types of distinctive geomorphic features are attributed to fluid venting which occurs at different rates, with the mounds developing slowly over time, but the CSD forming in discrete events perhaps associated with large earthquakes.
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    Genome analysis of the marine bacterium Kiloniella laminariae and first insights into comparative genomics with related Kiloniella species (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: Kiloniella laminariae is a true marine bacterium and the first member of the family and order, the Kiloniellaceae and Kiloniellales. K. laminariae LD81T (= DSM 19542T) was isolated from the marine macroalga Saccharina latissima and is a mesophilic, typical marine chemoheterotrophic aerobic bacterium with antifungal activity. Phylogenetic analysis of 16S rRNA gene sequence revealed the similarity of K. laminariae LD81T not only with three validly described species of the genus Kiloniella, but also with undescribed isolates and clone sequences from marine samples in the range of 93.6–96.7%. We report on the analysis of the draft genome of this alphaproteobacterium and describe some selected features. The 4.4 Mb genome has a G + C content of 51.4%, contains 4213 coding sequences including 51 RNA genes as well as 4162 protein-coding genes, and is a part of the Genomic Encyclopaedia of Bacteria and Archaea (GEBA) project. The genome provides insights into a number of metabolic properties, such as carbon and sulfur metabolism, and indicates the potential for denitrification and the biosynthesis of secondary metabolites. Comparative genome analysis was performed with K. laminariae LD81T and the animal-associated species Kiloniella majae M56.1T from a spider crab, Kiloniella spongiae MEBiC09566T from a sponge as well as Kiloniella litopenai P1-1 from a white shrimp, which all inhabit quite different marine habitats. The analysis revealed that the K. laminariae LD81T contains 1397 unique genes, more than twice the amount of the other species. Unique among others is a mixed PKS/NRPS biosynthetic gene cluster with similarity to the biosynthetic gene cluster responsible for the production of syringomycin.
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    Solenosmilia variabilis-bearing cold-water coral mounds off Brazil (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: Cold-water corals (CWC), dominantly Desmophyllum pertusum (previously Lophelia pertusa), and their mounds have been in the focus of marine research during the last two decades; however, little is known about the mound-forming capacity of other CWC species. Here, we present new 230Th/U age constraints of the relatively rarely studied framework-building CWC Solenosmilia variabilis from a mound structure off the Brazilian margin combined with computed tomography (CT) acquisition. Our results show that S. variabilis can also contribute to mound formation, but reveal coral-free intervals of hemipelagic sediment deposits, which is in contrast to most of the previously studied CWC mound structures. We demonstrate that S. variabilis only occurs in short episodes of 〈 4 kyr characterized by a coral content of up to 31 vol%. In particular, it is possible to identify distinct clusters of enhanced aggradation rates (AR) between 54 and 80 cm ka−1. The determined AR are close to the maximal growth rates of individual S. variabilis specimens, but are still up to one order of magnitude smaller than the AR of D. pertusum mounds. Periods of enhanced S. variabilis AR predominantly fall into glacial periods and glacial terminations that were characterized by a 60–90 m lower sea level. The formation of nearby D. pertusum mounds is also associated with the last glacial termination. We suggest that the short-term periods of coral growth and mound formation benefited from enhanced organic matter supply, either from the adjacent exposed shelf and coast and/or from enhanced sea-surface productivity. This organic matter became concentrated on a deeper water-mass boundary between South Atlantic Central Water and the Antarctic Intermediate Water and may have been distributed by a stronger hydrodynamic regime. Finally, periods of enhanced coral mound formation can also be linked to advection of nutrient-rich intermediate water masses that in turn might have (directly or indirectly) further facilitated coral growth and mound formation.
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    A brief commentary on the interpretation of Chinese speleothem δ18O records as summer monsoon intensity tracers (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Type: Article , PeerReviewed
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    An All-At-Once Newton Strategy for Marine Methane Hydrate Reservoir Models (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: The migration of methane through the gas hydrate stability zone (GHSZ) in the marine subsurface is characterized by highly dynamic reactive transport processes coupled to thermodynamic phase transitions between solid gas hydrates, free methane gas, and dissolved methane in the aqueous phase. The marine subsurface is essentially a water-saturated porous medium where the thermodynamic instability of the hydrate phase can cause free gas pockets to appear and disappear locally, causing the model to degenerate. This poses serious convergence issues for the general-purpose nonlinear solvers (e.g., standard Newton), and often leads to extremely small time-step sizes. The convergence problem is particularly severe when the rate of hydrate phase change is much lower than the rate of gas dissolution. In order to overcome this numerical challenge, we have developed an all-at-once Newton scheme tailored to our gas hydrate model, which can handle rate-based hydrate phase change coupled with equilibrium gas dissolution in a mathematically consistent and robust manner.
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    The Tsunami Inundation Hazard of the Maltese Islands (Central Mediterranean Sea): A Submarine Landslide and Earthquake Tsunami Scenario Study (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: The tsunami hazard for the Maltese Islands is poorly defined, and historic records are available for only two recent events. Most of the population and touristic infrastructure of the archipelago is concentrated along the eastern low-lying coastline, which is exposed to tsunamis from near-field and far-field sources. In this study we present a scenario-based tsunami inundation study to assess the impact of potential significant cases. We simulated four scenarios—two submarine landslide sources (outer Malta Plateau slide and Gela Basin slide) and two earthquake sources mimicking events comparable to the 365 A.D. western Hellenic Arc event and the 1693 south-east of Sicily event. We find that all scenarios cause inundation in densely populated low-lying bays or rias of Mellieha Bay, Xemxija, Salini, Gzira, Msida, Marsaskala, St Thomas Bay, Marsaxlokk and Birzebbuga. The largest inundation extents and flow depths (〉 10 m) are produced by the two landslide sources and the western Hellenic Arc earthquake. Of interest is the role of the Malta Escarpment and Sicily in amplifying and reflecting tsunami waves, and in generating consistent hot spots along the eastern coastline of Malta.
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    New Discorhabdin B Dimers with Anticancer Activity from the Antarctic Deep-Sea Sponge Latrunculia biformis (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: Latrunculia sponges represent a rich source of discorhabdin-type pyrroloiminoquinone alkaloids, a few of which comprise a dimeric structure. The anticancer-activity-guided isolation of the n-hexane subextract of the Antarctic deep-sea sponge Latrunculia biformis yielded the known compound (−)-(1R,2R,6R,8S,6'S)-discorhabdin B dimer (1) and two new derivatives, (−)-(1S,2R,6R,8S,6'S)-discorhabdin B dimer (2) and (−)-(1R,2R,6R,8S,6'S)-16',17'-dehydrodiscorhabdin B dimer (3). The chemical structures of compounds 1–3 were elucidated by means of HR-ESIMS, NMR, [], ECD spectroscopy, and a comparison with the previously reported discorhabdin analogs. Compounds 1 and 2 showed significant in vitro anticancer activity against the human colon cancer cell line (HCT-116), with IC50 values of 0.16 and 2.01 µM, respectively. Compared to monomeric discorhabdins, dimeric discorhabdins are very rare in Nature. This study adds two new discorhabdin dimers (2 and 3) to this small pyrroloiminoquinone subfamily. This is also the first report of compound 1 as a natural product and the first assessment of its in vitro anticancer activity.
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    Mining the Metabolome and the Agricultural and Pharmaceutical Potential of Sea Foam-Derived Fungi (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Sea foam harbors a diverse range of fungal spores with biological and ecological relevance in marine environments. Fungi are known as the producers of secondary metabolites that are used in health and agricultural sectors, however the potentials of sea foam-derived fungi have remained unexplored. In this study, organic extracts of six foam-derived fungal isolates belonging to the genera Penicillium, Cladosporium, Emericellopsis and Plectosphaerella were investigated for their antimicrobial activity against plant and human pathogens and anticancer activity. In parallel, an untargeted metabolomics study using UPLC-QToF–MS/MS-based molecular networking (MN) was performed to unlock their chemical inventory. Penicillium strains were identified as the most prolific producers of compounds with an average of 165 parent ions per strain. In total, 49 known mycotoxins and functional metabolites were annotated to specific and ubiquitous parent ions, revealing considerable chemical diversity. This allowed the identification of putative new derivatives, such as a new analog of the antimicrobial tetrapeptide, fungisporin. Regarding bioactivity, the Penicillium sp. isolate 31.68F1B showed a strong and broad-spectrum activity against seven plant and human pathogens, with the phytopathogen Magnaporthe oryzae and the human pathogen Candida albicans being the most susceptible (IC50 values 2.2 and 6.3 µg/mL, respectively). This is the first study mining the metabolome of the sea foam-derived fungi by MS/MS-based molecular networking, and assessing their biological activities against phytopathogens
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    A Flexible Autonomous Robotic Observatory Infrastructure for Bentho-Pelagic Monitoring (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: This paper presents the technological developments and the policy contexts for the project “Autonomous Robotic Sea-Floor Infrastructure for Bentho-Pelagic Monitoring” (ARIM). The development is based on the national experience with robotic component technologies that are combined and merged into a new product for autonomous and integrated ecological deep-sea monitoring. Traditional monitoring is often vessel-based and thus resource demanding. It is economically unviable to fulfill the current policy for ecosystem monitoring with traditional approaches. Thus, this project developed platforms for bentho-pelagic monitoring using an arrangement of crawler and stationary platforms at the Lofoten-Vesterålen (LoVe) observatory network (Norway). Visual and acoustic imaging along with standard oceanographic sensors have been combined to support advanced and continuous spatial-temporal monitoring near cold water coral mounds. Just as important is the automatic processing techniques under development that have been implemented to allow species (or categories of species) quantification (i.e., tracking and classification). At the same time, real-time outboard processed three-dimensional (3D) laser scanning has been implemented to increase mission autonomy capability, delivering quantifiable information on habitat features (i.e., for seascape approaches). The first version of platform autonomy has already been tested under controlled conditions with a tethered crawler exploring the vicinity of a cabled stationary instrumented garage. Our vision is that elimination of the tether in combination with inductive battery recharge trough fuel cell technology will facilitate self-sustained long-term autonomous operations over large areas, serving not only the needs of science, but also sub-sea industries like subsea oil and gas, and mining.
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    Evolution of male pregnancy associated with remodeling of canonical vertebrate immunity in seahorses and pipefishes (2020)
    National Academy of Sciences
    Details
    Publication Date: 2023-02-08
    Description: A fundamental problem for the evolution of pregnancy, the most specialized form of parental investment among vertebrates, is the rejection of the nonself-embryo. Mammals achieve immunological tolerance by down-regulating both major histocompatibility complex pathways (MHC I and II). Although pregnancy has evolved multiple times independently among vertebrates, knowledge of associated immune system adjustments is restricted to mammals. All of them (except monotremata) display full internal pregnancy, making evolutionary reconstructions within the class mammalia meaningless. Here, we study the seahorse and pipefish family (syngnathids) that have evolved male pregnancy across a gradient from external oviparity to internal gestation. We assess how immunological tolerance is achieved by reconstruction of the immune gene repertoire in a comprehensive sample of 12 seahorse and pipefish genomes along the “male pregnancy” gradient together with expression patterns of key immune and pregnancy genes in reproductive tissues. We found that the evolution of pregnancy coincided with a modification of the adaptive immune system. Divergent genomic rearrangements of the MHC II pathway among fully pregnant species were identified in both genera of the syngnathids: The pipefishes (Syngnathus) displayed loss of several genes of the MHC II pathway while seahorses (Hippocampus) featured a highly divergent invariant chain (CD74). Our findings suggest that a trade-off between immunological tolerance and embryo rejection accompanied the evolution of unique male pregnancy. That pipefishes survive in an ocean of microbes without one arm of the adaptive immune defense suggests a high degree of immunological flexibility among vertebrates, which may advance our understanding of immune-deficiency diseases.
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    Variability and Community Composition of Marine Unicellular Eukaryote Assemblages in a Eutrophic Mediterranean Urban Coastal Area with Marked Plankton Blooms and Red Tides (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: The Thessaloniki Bay is a eutrophic coastal area which has been characterized in recent years by frequent and intense phytoplankton blooms and red tides. The aim of the study was to investigate the underexplored diversity of marine unicellular eukaryotes in four different sampling sites in Thessaloniki Bay during a year of plankton blooms, red tides, and mucilage aggregates. High-Throughput Sequencing (HTS) was applied in extracted DNA from weekly water samples targeting the 18S rRNA gene. In almost all samples, phytoplankton blooms and/or red tides and mucilage aggregates were observed. The metabarcoding analysis has detected the known unicellular eukaryotic groups frequently observed in the Bay, dominated by Bacillariophyta and Dinoflagellata, and revealed taxonomic groups previously undetected in the study area (MALVs, MAST, and Cercozoa). The dominant OTUs were closely related to species known to participate in red tides, harmful blooms, and mucilage aggregates. Other OTUs, present also during the blooms in low abundance (number of reads), were closely related to known harmful species, suggesting the occurrence of rare taxa with potential negative impacts on human health not detectable with classical microscopy. Overall, the unicellular eukaryote assemblages showed temporal patterns rather than small-scale spatial separation responding to the variability of physical and chemical factors.
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    Global reconstruction reduces the uncertainty of oceanic nitrous oxide emissions and reveals a vigorous seasonal cycle (2020)
    National Academy of Sciences
    Details
    Publication Date: 2023-02-08
    Description: Assessment of the global budget of the greenhouse gas nitrous oxide ([Formula: see text]O) is limited by poor knowledge of the oceanic [Formula: see text]O flux to the atmosphere, of which the magnitude, spatial distribution, and temporal variability remain highly uncertain. Here, we reconstruct climatological [Formula: see text]O emissions from the ocean by training a supervised learning algorithm with over 158,000 [Formula: see text]O measurements from the surface ocean-the largest synthesis to date. The reconstruction captures observed latitudinal gradients and coastal hot spots of [Formula: see text]O flux and reveals a vigorous global seasonal cycle. We estimate an annual mean [Formula: see text]O flux of 4.2 ± 1.0 Tg N[Formula: see text], 64% of which occurs in the tropics, and 20% in coastal upwelling systems that occupy less than 3% of the ocean area. This [Formula: see text]O flux ranges from a low of 3.3 ± 1.3 Tg N[Formula: see text] in the boreal spring to a high of 5.5 ± 2.0 Tg N[Formula: see text] in the boreal summer. Much of the seasonal variations in global [Formula: see text]O emissions can be traced to seasonal upwelling in the tropical ocean and winter mixing in the Southern Ocean. The dominant contribution to seasonality by productive, low-oxygen tropical upwelling systems (〉75%) suggests a sensitivity of the global [Formula: see text]O flux to El Niño-Southern Oscillation and anthropogenic stratification of the low latitude ocean. This ocean flux estimate is consistent with the range adopted by the Intergovernmental Panel on Climate Change, but reduces its uncertainty by more than fivefold, enabling more precise determination of other terms in the atmospheric [Formula: see text]O budget.
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    Steam and Flame Applications as Novel Methods of Population Control for Invasive Asian Clam (Corbicula fluminea) and Zebra Mussel (Dreissena polymorpha) (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: Control strategies for established populations of invasive alien species can be costly and complex endeavours, which are frequently unsuccessful. Therefore, rapid-reaction techniques that are capable of maximising efficacy whilst minimising environmental damage are urgently required. The Asian clam (Corbicula fluminea Müller, 1774), and the zebra mussel (Dreissena polymorpha Pallas, 1771), are invaders capable of adversely affecting the functioning and biodiversity of freshwater ecosystems. Despite efforts to implement substantial population-control measures, both species continue to spread and persist within freshwater environments. As bivalve beds often become exposed during low-water conditions, this study examined the efficacy of steam-spray (≥100 °C, 350 kPa) and open-flame burn treatments (~1000 °C) to kill exposed individuals. Direct steam exposure lasting for 5 min caused 100% mortality of C. fluminea buried at a depth of 3 cm. Further, combined rake and thermal shock treatments, whereby the substrate is disturbed between each application of either a steam or open flame, caused 100% mortality of C. fluminea specimens residing within a 4-cm deep substrate patch, following three consecutive treatment applications. However, deeper 8-cm patches and water-saturated substrate reduced maximum bivalve species mortality rates to 77% and 70%, respectively. Finally, 100% of D. polymorpha specimens were killed following exposure to steam and open-flame treatments lasting for 30 s and 5 s, respectively. Overall, our results confirm the efficacy of thermal shock treatments as a potential tool for substantial control of low-water-exposed bivalves. Although promising, our results require validation through upscaling to field application, with consideration of other substrate types, increased substrate depth, greater bivalve densities, non-target and long-term treatment effects.
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    Quantifying Metal Contamination and Potential Uptake by Phragmites australis Adans. (Poaceae) Along a Subtropical River System (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: Metal pollution is pervasive across terrestrial and aquatic ecosystems owing to anthropogenic activities. Sediments can accrue high concentrations of metals and act as secondary sources, and thus may be valuable indicators of metal contamination across spatiotemporal scales. In aquatic systems, the extent of metal pollution may be further mediated by transference among sediments and living organisms, with plant metal contaminants potentially predictive of underlying sediment concentrations. The present study thus quantifies the extent of metal pollutants (Na, K, Ca, Mg, Cu, Zn, Mn, B, Fe) across multiple study sites and seasons (cool-dry, hot-wet, hot-dry) in a subtropical river system. Furthermore, uptake by a key macrophyte species, Phragmites australis, was examined and correlated with sediment pollution levels among different plant parts. Overall, sediment pollution load indices differed seasonally, being significantly highest during the cool-dry season irrespective of sampling location, suggesting that periods with reduced water flows can exacerbate metal pollution levels in riverine sediments. Also, metal concentrations were highest in upstream wetland sites, indicating a capacity for metal sink effects in these areas. Overall, macrophytes contained high concentrations of select metals, however composition and concentrations differed across plant parts, with roots containing particularly high concentrations of Fe and B. Correlations between sediment and macrophyte concentrations were mostly non-significant, whilst stem Mn and Fe concentrations correlated significantly negatively and positively to sediment concentrations, respectively. The present study identifies key spatiotemporal differences in multiple metal contaminants in an understudied subtropical aquatic system that align with hydrological regime differences. Whilst macrophytes were not found to be major accumulators, or predictors, of metal contaminants in this study, they may collectively play a central role in concentration regulation in aquatic systems.
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    Unveiling assumptions through interdisciplinary scrutiny: Observations from the German Priority Program on Climate Engineering (SPP 1689) (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: The interdisciplinary exchange in climate engineering research offers a unique opportunity to make assumptions more explicit for such research projects. While making assumptions explicit is the standard in all disciplinary sciences, some assumptions in the context of societal challenges can only be usefully unveiled, discussed, and verified from the perspective of other research disciplines. Results from successful interdisciplinary collaborations are then more accessible and more generalizable to actors beyond the confines of the academic community. We aim to illustrate how interdisciplinary exchange helps to unveil assumptions in research endeavors and why this is important for successful interdisciplinary collaborations. We therefore follow different stages of the German Priority Program on Climate Engineering (SPP 1689), which we use as an example case of a successful interdisciplinary project. SPP 1689 focused on risks, challenges, and opportunities of Climate Engineering from the perspectives of numerous disciplines. Major results were that the initial assessments of technologies had to be sobered, the consideration of trade-offs is crucial for the potential assessment, and governance issues appeared larger than previously considered. From the reflections of SPP 1689, we conclude with three lessons learned: (1) The project profited from egalitarian organizational structures and communicative practices, preventing the predominance from single disciplines. (2) Within the project continuous efforts were undertaken to foster interdisciplinary understanding. In addition, the flexible project structure allowed for the accommodation of research needs arising as a result of these exchanges. (3) SPP 1689 offered early career researchers a platform for professional exchange on common challenges and best practices of being a part of an interdisciplinary research project.
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    Dispersal mitigates bacterial dominance over microalgal competitor in metacommunities (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: Ecological theory suggests that a combination of local and regional factors regulate biodiversity and community functioning in metacommunities. The relative importance of different factors structuring communities likely changes over successional time, but to date this concept is scarcely documented. In addition, the few studies describing successional dynamics in metacommunity regulation have only focused on a single group of organisms. Here, we report results of an experimental study testing the effect size of initial local community composition and dispersal between local patches on community dynamics of benthic microalgae and their associated bacteria over community succession. Our results show that over time dispersal outweighed initial effects of community composition on microalgal evenness and biomass, microalgal β-diversity, and the ratio of bacteria to microalgae. At the end of the experiment (ca. 20 microalgae generations), dispersal significantly decreased microalgal evenness and β-diversity by promoting one regionally superior competitor. Dispersal also decreased the ratio of bacteria to microalgae, while it significantly increased microalgal biomass. These results suggest that the dispersal-mediated establishment of a dominant and superior microalgae species prevented bacteria from gaining competitive advantage over the autotrophs in these metacommunities, ultimately maintaining the provision of autotrophic biomass. Our study emphasizes the importance of time for dispersal to be a relevant community-structuring mechanism. Moreover, we highlight the need for considering multiple competitors in complex metacommunity systems to properly pinpoint the consequences of local change in dominance through dispersal for metacommunity function.
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    Hans Peter Cornelius (1888–1950): a perfect mapping geologist and scientific explorer of the Alps (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: Hans Peter Cornelius was a squeamishly and accurately mapping field geologist with an eye for the finest detail as well as for the large-scale architectural structure of mountain ranges. His excellent work concerned the Rhaetian and Allgau Alps, South Tyrol, the Valais and Ticino in Switzerland and many regions in Austria. His publications on the Err-Julier Group, the Insubric Line, the Grossglockner Group, the Rax-Schneeberg Group, the alpine Grauwackenzone, and the Penninic series of the Western and Eastern Alps became particularly important.
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  • 42
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    Effects of Harmful Blooms of Large-Sized and Colonial Cyanobacteria on Aquatic Food Webs (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Cyanobacterial blooms are the most important and best studied type of harmful algal blooms in fresh waters and brackish coastal seas. We here review how and to which extent they resist grazing by zooplankton, how zooplankton responds to cyanobacterial blooms and how these effects are further transmitted to fish. Size, toxicity and poor nutritional value are widespread mechanisms of grazing defense by cyanobacteria. In some cases, defenses are inducible, in some they are obligate. However, to some extent zooplankton overcome grazing resistance, partly after evolutionary adaptation. Cyanotoxins are also harmful to fish and may cause fish kills. However, some fish species feed on Cyanobacteria, are able to reduce their abundance, and grow on a cyanobacterial diet. While reduced edibility for crustacean zooplankton tends to elongate the food chain from primary producers to fish, direct feeding by fish tends to shorten it. The few available comparative studies relating fish yield to nutrients or phytoplankton provide no indication that cyanobacteria should reduce the ratio fish production: primary production.
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    Small copepods of the deep South Adriatic Pit: diversity, seasonal and multi-annual dynamics, and implications from the regional hydrography (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: In order to expand the fragmentary knowledge on the interactions between the environment and copepod distribution in the deep offshore Adriatic Sea, microcopepod assemblages were investigated during 31 cruises in the 1200-m deep central part of the South Adriatic Pit (SAP), from May 1998 to December 2009. Samples were collected in 8 depth layers, using a 53-μm mesh Nansen net equipped with a closing system. The taxonomic composition and vertical and temporal distributions of copepod abundances were analyzed, considering naupliar stages for all species combined, total calanoid copepodites, copepodite stages and adults separately for oithonids and oncaeids, and all post-naupliar stages combined of harpacticoids and mormonilloids. Corycaeid copepods are not considered in the present study. Data are presented for 41 non-calanoid copepod species, as well as for 7 undetermined morphospecies. Within the family Oncaeidae, four species new to the Adriatic Sea fauna are registered. Nauplii were generally the numerically dominant group, especially in the upper epipelagic layers, where they outnumbered all total post-naupliar stages by a factor of an average 3.5. Oncaeids were notably abundant, accounting in total post-naupliar copepods for an average proportion of 33% in the upper 50 m and 74% between 300- and 400-m depth. In the epipelagic zone, copepod abundances were enhanced by the cyclonic circulation which enriches the central part of the SAP with new primary production. A strong advection of Levantine Intermediate Water (LIW) influenced the post-naupliar abundances also in mesopelagic and deeper layers, by promoting the sinking of heavy water mass from the connected middle Adriatic sub-basin which enhances the trophic conditions and transports new organisms into the deeper layers of the SAP. Therefore, the variability in copepod abundances was influenced not only by the seasonal temperature fluctuations but also by the productivity conditions in the SAP which are connected to the movements of regional water masses and the resulting effects on the internal Adriatic circulation.
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    Experimental Characterization of Single-Color Power LEDs Used as Photodetectors (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Semiconductor-based light emitting diodes can be used for photon emission as well as for detection of photons. In this paper, we present a fair comparison between off-the-shelf power Light emitting diodes (LEDs) and a silicon photodetector with respect to their spectral, temporal, and spatial properties. The examined LED series features unexpected good sensitivity and distinct optical bandpass characteristic suitable for daylight filtering or color selectivity. Primary application is short range optical underwater communication, but results are generally applicable.
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  • 45
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    Latitudinal gradient in the respiration quotient and the implications for ocean oxygen availability (2020)
    National Academy of Sciences
    Details
    Publication Date: 2023-02-08
    Description: Climate-driven depletion of ocean oxygen strongly impacts the global cycles of carbon and nutrients as well as the survival of many animal species. One of the main uncertainties in predicting changes to marine oxygen levels is the regulation of the biological respiration demand associated with the biological pump. Derived from the Redfield ratio, the molar ratio of oxygen to organic carbon consumed during respiration (i.e., the respiration quotient, r−O2:C) is consistently assumed constant but rarely, if ever, measured. Using a prognostic Earth system model, we show that a 0.1 increase in the respiration quotient from 1.0 leads to a 2.3% decline in global oxygen, a large expansion of low-oxygen zones, additional water column denitrification of 38 Tg N/y, and the loss of fixed nitrogen and carbon production in the ocean. We then present direct chemical measurements of r−O2:C using a Pacific Ocean meridional transect crossing all major surface biome types. The observed r−O2:C has a positive correlation with temperature, and regional mean values differ significantly from Redfield proportions. Finally, an independent global inverse model analysis constrained with nutrients, oxygen, and carbon concentrations supports a positive temperature dependence of r−O2:C in exported organic matter. We provide evidence against the common assumption of a static biological link between the respiration of organic carbon and the consumption of oxygen. Furthermore, the model simulations suggest that a changing respiration quotient will impact multiple biogeochemical cycles and that future warming can lead to more intense deoxygenation than previously anticipated.
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    Revisiting remote drivers of the 2014 drought in South-Eastern Brazil (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: South-Eastern Brazil experienced a devastating drought associated with significant agricultural losses in austral summer 2014. The drought was linked to the development of a quasi-stationary anticyclone in the South Atlantic in early 2014 that affected local precipitation patterns over South-East Brazil. Previous studies have suggested that the unusual blocking was triggered by tropical Pacific sea surface temperature (SST) anomalies and, more recently, by convection over the Indian Ocean related to the Madden-Julian Oscillation. Further investigation of the proposed teleconnections appears crucial for anticipating future economic impacts. In this study, we use numerical experiments with an idealized atmospheric general circulation model forced with the observed 2013/2014 SST anomalies in different ocean basins to understand the dominant mechanism that initiated the 2014 South Atlantic anticyclonic anomaly. We show that a forcing with global 2013/2014 SST anomalies enhances the chance for the occurrence of positive geopotential height anomalies in the South Atlantic. However, further sensitivity experiments with SST forcings in separate ocean basins suggest that neither the Indian Ocean nor tropical Pacific SST anomalies alone have contributed significantly to the anomalous atmospheric circulation that led to the 2014 South-East Brazil drought. The model study rather points to an important role of remote forcing from the South Pacific, local South Atlantic SSTs, and internal atmospheric variability in driving the persistent blocking over the South Atlantic.
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    Miocene syn-rift evolution of the North Croatian Basin (Carpathian–Pannonian Region): new constraints from Mts. Kalnik and Požeška gora volcaniclastic record with regional implications (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: Mts. Kalnik and Požeška gora volcaniclastic sequences hold valuable information concerning the Miocene syn-rift evolution of the North Croatian Basin, and the evolution of the Carpathian–Pannonian Region and the Central Paratethys. We present volcanological, high-precision geochronological, and compositional data of volcanic glass to constrain their tephrochronology, magmatic provenance, and timing of the initial Central Paratethys flooding of the North Croatian Basin. Based on CA-ID-TIMS U–Pb zircon ages (18.060 ± 0.023 Ma for Mt. Kalnik and 15.345 ± 0.020 Ma for Mt. Požeška gora) and coeval 40Ar/39Ar sanidine ages (18.14 ± 0.38 Ma and 18.25 ± 0.38 Ma for Mt. Kalnik and 15.34 ± 0.32 Ma and 15.43 ± 0.32 Ma for Mt. Požeška gora), Mt. Kalnik rhyolitic massive ignimbrites and Mt. Požeška gora rhyolitic primary volcaniclastic turbidites are coeval with Carpathian–Pannonian Region Miocene post-collisional silicic volcanism, which was caused by lithospheric thinning of the Pannonian Basin. Their affiliation to Carpathian–Pannonian Region magmatic activity is supported by their subduction-related geochemical signatures. Although Mts. Kalnik and Požeška gora volcaniclastics are coeval with the Bükkalja Volcanic Field Csv-2 rhyolitic ignimbrites, North Alpine Foreland Basin, Styrian Basin, Vienna Basin, and Dinaride Lake System bentonites and volcaniclastic deposits, reliable tephrochronological interpretations based on comparison of volcanic glass geochemical composition are not possible due to a lack of data and/or methodological discrepancies. Our new high-precision geochronology data prove that the initial Middle Miocene (Badenian) marine flooding of parts of the North Croatian Basin occurred at least ~ 0.35 Ma (during the NN4 Zone) before the generally accepted ~ 15 Ma maximum flooding age at the basin scale, calibrating the timing of the onset of the widespread “mid-Langhian” Central Paratethys flooding.
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    Resolving and Parameterising the Ocean Mesoscale in Earth System Models (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: Purpose of Review: Assessment of the impact of ocean resolution in Earth System models on the mean state, variability, and future projections and discussion of prospects for improved parameterisations to represent the ocean mesoscale. Recent Findings: The majority of centres participating in CMIP6 employ ocean components with resolutions of about 1 degree in their full Earth System models (eddy-parameterising models). In contrast, there are also models submitted to CMIP6 (both DECK and HighResMIP) that employ ocean components of approximately 1/4 degree and 1/10 degree (eddy-present and eddy-rich models). Evidence to date suggests that whether the ocean mesoscale is explicitly represented or parameterised affects not only the mean state of the ocean but also the climate variability and the future climate response, particularly in terms of the Atlantic meridional overturning circulation (AMOC) and the Southern Ocean. Recent developments in scale-aware parameterisations of the mesoscale are being developed and will be included in future Earth System models. Summary: Although the choice of ocean resolution in Earth System models will always be limited by computational considerations, for the foreseeable future, this choice is likely to affect projections of climate variability and change as well as other aspects of the Earth System. Future Earth System models will be able to choose increased ocean resolution and/or improved parameterisation of processes to capture physical processes with greater fidelity.
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    Oxygenated Acyclic Diterpenes with Anticancer Activity from the Irish Brown Seaweed Bifurcaria bifurcata (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Brown alga Bifurcaria bifurcata is a prolific source of bioactive acyclic (linear) diterpenes with high structural diversity. In the continuation of our investigations on Irish brown algae, we undertook an in-depth chemical study on the n-hexanes and chloroform subextracts of B. bifurcata that led to isolation of six new (1–6) and two known (7–8) acyclic diterpenes. Chemical structures of the compounds were elucidated by a combination of 1D and 2D NMR, HRMS, FT-IR, [α]D and vibrational circular dichroism (VCD) spectroscopy. Compounds 1–8, as well as three additional linear diterpenes (9–11), which we isolated from the same seaweed before, were tested against the human breast cancer cell line (MDA-MB-231). Several compounds moderately inhibited the growth of the MDA-MB-231 cell line with IC50 values ranging from 11.6 to 32.0 μg/mL. The present study carried out on the lipophilic extracts of the Irish B. bifurcata shows the enormous capacity of this seaweed to produce a large palette of acyclic diterpenes with diverse oxygenation and substitution patterns and promising bioactivities.
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    XRD Identification of Ore Minerals during Cruises: Refinement of Extraction Procedure with Sodium Acetate Buffer (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: The on-board identification of ore minerals during a cruise is often postponed until long after the cruise is over. During the M127 cruise, 21 cores with deep-seafloor sediments were recovered in the Trans-Atlantic Geotraverse (TAG) field along the Mid Atlantic Ridge (MAR). Sediments were analyzed on-board for physicochemical properties such as lightness (L*), pH and Eh. Selected samples were studied for mineral composition by X-ray powder diffraction (XRD). Based on XRD data, sediment samples were separated into high-, low- and non-carbonated. Removal of carbonates is a common technique in mineralogical studies in which HCl is used as the extraction agent. In the present study, sequential extraction was performed with sodium acetate buffer (pH 5.0) to remove carbonates. The ratio between the highest calcite XRD reflection in the original samples (Iorig) vs its XRD-reflection in samples after their treatment with the buffer (Itreat) was used as a quantitative parameter of calcite removal, as well as to identify minor minerals in carbonated samples (when Iorig/Itreat 〉 24). It was found that the lightness parameter (L*) showed a positive correlation with calcite XRD reflection in selected TAG samples, and this could be applied to the preliminary on-board determination of extraction steps with acetate buffer (pH 5.0) in carbonated sediment samples. The most abundant minerals detected in carbonated samples were quartz and Al- and Fe-rich clays. Other silicates were also detected (e.g., calcic plagioclase, montmorillonite, nontronite). In non-carbonated samples, Fe oxides and hydroxides (goethite and hematite, respectively) were detected. Pyrite was the dominant hydrothermal mineral and Cu sulfides (chalcopyrite, covellite) and hydrothermal Mn oxides (birnessite and todorokite) were mineral phases identified in few samples, whereas paratacamite was detected in the top 20 cm of the core. The present study demonstrates that portable XRD analysis makes it possible to characterize mineralogy at cored sites, in particular in both low- and high-carbonated samples, before the end of most cruises, thus enabling the quick modification of exploration strategies in light of new information as it becomes available in near-real time.
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    Freshening rather than warming drives trematode transmission from periwinkles to mussels (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: In the Western Baltic Sea, climate change is happening at much faster rate than in most other seas and organisms are additionally exposed to a steep and variable salinity gradient. Climate change has previously been shown to affect parasite transmission in other marine ecosystems, yet little is known about potential effects of warming and desalination on parasite–host interactions. In laboratory experiments, we determined the combined effects of projected seawater warming and freshening on the emergence, activity, survival, and infectivity of cercariae (free-swimming infectious stage) of the trematode Himasthla elongata (Mehlis 1831), shed from its first intermediate host, the periwinkle Littorina littorea (Linnaeus 1758), in the Baltic Sea. We also assessed the susceptibility of the second intermediate host, the mussel Mytilus edulis Linnaeus, 1758, to cercarial infections. Generally, salinity was the main driver, particularly of cercarial activity, infectivity, and mussel susceptibility to infection. At the lowest salinity (13), cercariae were 50% less active compared to the highest salinity (19). Infection success and host susceptibility followed a similar pattern, with 47% and 43% less metacercariae (encysted stage) present at salinity 13 than at salinity 19, respectively. In contrast, effects of simulated warming were found only for cercarial survival, with cercarial longevity being higher at 19 than at 23 °C. No significant interactions between temperature and salinity were found. In contrast to the literature, the results suggest that a climate change-driven freshening (partly also warming) may lead to a general decline of marine trematodes, with possible beneficial effects for the involved hosts.
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    Colonisation success of introduced oysters is driven by wave-related exposure (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: The Pacific oyster, Magallana gigas, is an extremely successful invader with established populations in marine and estuarine habitats almost all over the world. Ecological implications of the introduction of this species to indigenous communities are well documented. However, the processes by which this species successfully establishes in a recipient community is still insufficiently understood. The early detection of the oyster at the island of Helgoland (North Sea) provided the ideal opportunity to investigate whether physical mechanisms, such as wave-exposure, influence their successful colonisation. We hypothesized that oyster colonisation benefits from wave-protected conditions. For this purpose, we evaluated colonisation success of M. gigas among wave-protected sites and wave-exposed sites along the island's pier system. The densities of M. gigas were significantly higher at wave-protected sites than at wave-exposed sites, and the frequency distributions of oyster lengths indicated better growth and higher survival rates in the harbours. This higher colonisation success at wave-protected sites may be explained by the relative retention time of water masses in the harbours, probably resulting in both reduced larval drift and lower energy demands for secretion formation (i.e. firmer binding to the substrate). The fact that the density of M. gigas can vary greatly on small spatial scales depending on exposure corroborates a multiple exposure sampling approach to monitor oyster populations in order to avoid potential overestimations of population sizes in given areas.
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    Bioactive Molecular Networking for Mapping the Antimicrobial Constituents of the Baltic Brown Alga Fucus vesiculosus (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: The brown alga Fucus vesiculosus is common to the intertidal zones of the Baltic Sea, where it is exposed to high fouling pressures by microorganisms. Our previous studies showed, repeatedly, the consistent antimicrobial activity of F. vesiculosus crude extracts against human pathogens, while untargeted metabolomics analyses have revealed a variety of metabolites. In this study, we applied the UPLC-QToF-MS/MS-based “bioactive molecular networking” (BMN) concept on the most bioactive n-hexane and n-butanol subextracts of Baltic F. vesiculosus coupled with in silico dereplication tools to identify the compounds responsible for antimicrobial activity. The first antimicrobial cluster identified by BMN was galactolipids. Our targeted isolation efforts for this class led to the isolation of six monogalactosyldiacylglycerol (MGDG) derivatives (1–6) and one digalactosyldiacylglycerol (DGDG, 7). The MGDGs 5 and 6 and the DGDG 7 exhibited activity against Staphylococcus aureus. The second compound class with high bioactivity was phlorotannins. In particular, phlorethol-type phlorotannins showed high correlations with antimicrobial activity based on the BMN approach, and two phlorotannins (8–9) were isolated. This study shows that antimicrobial components of F. vesiculosus reside in the algal cell walls and membranes and that BMN provides a complementary tool for the targeted isolation of bioactive metabolites.
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    Microbial diversity of the glass sponge Vazella pourtalesii in response to anthropogenic activities (2020)
    Springer
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    Publication Date: 2023-02-08
    Description: Establishment of adequate conservation areas represents a challenging but crucial task in the conservation of genetic diversity and biological variability. Anthropogenic pressures on marine ecosystems and organisms are steadily increasing. Whether and to what extent these pressures influence marine genetic biodiversity is only starting to be revealed. Using 16S rRNA gene amplicon sequencing, we analysed the microbial community structure of 33 individuals of the habitat-forming glass sponge Vazella pourtalesii, as well as reference seawater, sediment, and biofilm samples. We assessed how two anthropogenic impacts, i.e. habitat destruction by trawling and artificial substrate provision (moorings made of composite plastic), correspond with in situ V. pourtalesii microbiome variability. In addition, we evaluated the role of two bottom fishery closures in preserving sponge-associated microbial diversity on the Scotian Shelf, Canada. Our results illustrate that V. pourtalesii sponges collected from pristine sites within fishery closures contained distinct and taxonomically largely novel microbial communities. At the trawled site we recorded significant quantitative differences in distinct microbial phyla, such as a reduction in Nitrospinae in sponges and environmental references. Individuals of V. pourtalesii growing on the mooring were significantly enriched in Bacteroidetes, Verrucomicrobia and Cyanobacteria in comparison to sponge individuals growing on the natural seabed. Due to a concomitant enrichment of these taxa in the mooring biofilm, we propose that biofilms on artificial substrates may ‘prime’ sponge-associated microbial communities when small sponges settle on such substrates. These observations likely have relevant management implications when considering the increase of artificial substrates in the marine environment, e.g., marine litter, off-shore wind parks, and petroleum platforms.
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    Is Awareness on Plastic Pollution Being Raised in Schools? Understanding Perceptions of Primary and Secondary School Educators (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Plastic pollution is a major global issue and its impacts on ecosystems and socioeconomic sectors lack comprehensive understanding. The integration of plastics issues into the educational system of both primary and secondary schools has often been overlooked, especially in Africa, presenting a major challenge to environmental awareness. Owing to the importance of early age awareness, this study aims to investigate whether plastic pollution issues are being integrated into South African primary and secondary education school curriculums. Using face-to-face interviews with senior educators, we address this research problem by investigating (i) the extent to which teachers cover components of plastic pollution, and (ii) educator understandings of plastic pollution within terrestrial and aquatic environments. The results indicate that plastic pollution has been integrated into the school curriculum in technology, natural science, geography, life science, life skills and life orientation subjects. However, there was a lack of integration of management practices for plastics littering, especially in secondary schools, and understanding of dangers among different habitat types. This highlights the need for better educational awareness on the plastic pollution problem at both primary and secondary school level, with increased environmental programs needed to educate schools on management practices and impacts
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    MorphoCluster: Efficient Annotation of Plankton Images by Clustering (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: In this work, we present MorphoCluster, a software tool for data-driven, fast, and accurate annotation of large image data sets. While already having surpassed the annotation rate of human experts, volume and complexity of marine data will continue to increase in the coming years. Still, this data requires interpretation. MorphoCluster augments the human ability to discover patterns and perform object classification in large amounts of data by embedding unsupervised clustering in an interactive process. By aggregating similar images into clusters, our novel approach to image annotation increases consistency, multiplies the throughput of an annotator, and allows experts to adapt the granularity of their sorting scheme to the structure in the data. By sorting a set of 1.2 M objects into 280 data-driven classes in 71 h (16 k objects per hour), with 90% of these classes having a precision of 0.889 or higher. This shows that MorphoCluster is at the same time fast, accurate, and consistent; provides a fine-grained and data-driven classification; and enables novelty detection.
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    An Automated Pipeline for Image Processing and Data Treatment to Track Activity Rhythms of Paragorgia arborea in Relation to Hydrographic Conditions (2020)
    MDPI
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    Publication Date: 2023-02-08
    Description: Imaging technologies are being deployed on cabled observatory networks worldwide. They allow for the monitoring of the biological activity of deep-sea organisms on temporal scales that were never attained before. In this paper, we customized Convolutional Neural Network image processing to track behavioral activities in an iconic conservation deep-sea species—the bubblegum coral Paragorgia arborea—in response to ambient oceanographic conditions at the Lofoten-Vesterålen observatory. Images and concomitant oceanographic data were taken hourly from February to June 2018. We considered coral activity in terms of bloated, semi-bloated and non-bloated surfaces, as proxy for polyp filtering, retraction and transient activity, respectively. A test accuracy of 90.47% was obtained. Chronobiology-oriented statistics and advanced Artificial Neural Network (ANN) multivariate regression modeling proved that a daily coral filtering rhythm occurs within one major dusk phase, being independent from tides. Polyp activity, in particular extrusion, increased from March to June, and was able to cope with an increase in chlorophyll concentration, indicating the existence of seasonality. Our study shows that it is possible to establish a model for the development of automated pipelines that are able to extract biological information from times series of images. These are helpful to obtain multidisciplinary information from cabled observatory infrastructures.
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    Inverse response of 231Pa/230Th to variations of the Atlantic meridional overturning circulation in the North Atlantic intermediate water (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: This study aims to provide a more detailed understanding of the behavior of 231Pa/230Th under varying ocean circulation regimes. The North Atlantic provides a unique sedimentary setting with its ice-rafted detritus (IRD) layers deposited during glacial times. These layers have been found north of 40° N (Ruddiman Belt) and are most pronounced during Heinrich Stadials. Most of these sediments have been recovered from the deep North Atlantic basin typically below 3000 m water depth. This study reports sedimentological and sediment geochemical data from one of the few sites at intermediate depth of the open North Atlantic (core SU90-I02, 45° N 39° W, 1965 m water depth) within the Ruddiman Belt. The time periods of Heinrich Stadials 1 and 2 of this core were identified with the help of the major element composition by XRF scanning and by IRD counting. Along the core profile, the sedimentary 231Pa/230Th activity ratio has been measured as a kinematic proxy for the circulation strength. The 231Pa/230Th record shows highest values during the Holocene and Last Glacial Maximum, above the natural production ratio of these isotopes. During Heinrich Stadials 1 and 2, when Atlantic meridional overturning circulation was most reduced, the 231Pa/230Th record shows overall lowest values below the production ratio. This behavior is contrary to classical findings of 231Pa/230Th from the northwestern Atlantic where a strong Holocene circulation is associated with low values. However, this behavior at the presented location is in agreement with results from simulations of the 231Pa/230Th-enabled Bern3D Earth system model.
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    Pyrenosetins A–C, New Decalinoylspirotetramic Acid Derivatives Isolated by Bioactivity-Based Molecular Networking from the Seaweed-Derived Fungus Pyrenochaetopsis sp. FVE-001 (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Marine algae represent a prolific source of filamentous fungi for bioprospecting. In continuation of our search for new anticancer leads from fungi derived from the brown alga Fucus vesiculosus, an endophytic Pyrenochaetopsis sp. FVE-001 was selected for an in-depth chemical analysis. The crude fungal extract inhibited several cancer cell lines in vitro, and the highest anticancer activity was tracked to its CHCl3–soluble portion. A bioactivity-based molecular networking approach was applied to C18-SPE fractions of the CHCl3 subextract to predict the bioactivity scores of metabolites in the fractions and to aid targeted purification of anticancer metabolites. This approach led to a rapid isolation of three new decalinoylspirotetramic acid derivatives, pyrenosetins A–C (1–3) and the known decalin tetramic acid phomasetin (4). The structures of the compounds were elucidated by extensive NMR, HR-ESIMS, FT-IR spectroscopy, [α]D and Mosher’s ester method. Compounds 1 and 2 showed high anticancer activity against malignant melanoma cell line A-375 (IC50 values 2.8 and 6.3 μM, respectively), in line with the bioactivity predictions. This is the first study focusing on secondary metabolites of a marine-derived Pyrenochaetopsis sp. and the second investigation performed on the member of the genus Pyrenochaetopsis.
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    Weakened SST variability in the tropical Atlantic Ocean since 2000 (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: A prominent weakening in equatorial Atlantic sea surface temperature (SST) variability, occurring around the year 2000, is investigated by means of observations, reanalysis products and the linear recharge oscillator (ReOsc) model. Compared to the time period 1982–1999, during 2000–2017 the May–June–July SST variability in the eastern equatorial Atlantic has decreased by more than 30%. Coupled air–sea feedbacks, namely the positive Bjerknes feedback and the negative net heat flux damping are important drivers for the equatorial Atlantic interannual SST variability. We find that the Bjerknes feedback weakened after 2000 while the net heat flux damping increased. The weakening of the Bjerknes feedback does not appear to be fully explainable by changes in the mean state of the tropical Atlantic. The increased net heat flux damping is related to an enhanced response of the latent heat flux to the SST anomalies (SSTa). Strengthened trade winds as well as warmer SSTs are suggested to increase the air–sea specific humidity difference and hence, enhancing the latent heat flux response to SSTa. A combined effect of those two processes is proposed to be responsible for the weakened SST variability in the eastern equatorial Atlantic. The ReOsc model supports the link between reduced SST variability, weaker Bjerknes feedback and stronger net heat flux damping.
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    Opinion: We need a global movement to transform ocean science for a better world (2020)
    National Academy of Sciences
    Details
    Publication Date: 2023-02-08
    Description: The ocean is our planet’s largest life-support system. It stabilizes climate; stores carbon; produces oxygen; nurtures biodiversity; directly supports human well-being through food, mineral, and energy resources; and provides cultural and recreational services. The value of the ocean economy speaks to its importance: The Organization for Economic Cooperation and Development (OECD) estimates that by 2030, $3 trillion USD will be generated annually from ocean sectors such as transportation, fishing, tourism, and energy (1). Unsustainable resource extraction, pollution, climate change, and habitat destruction are on the rise and affecting many parts of the world’s oceans (2). The ocean is rapidly changing, and yet the ways in which these changes will play out are not yet clear.
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    High CO2 and warming affect microzooplankton food web dynamics in a Baltic Sea summer plankton community (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: Aquatic ecosystems face a multitude of environmental stressors, including warming and acidification. While warming is expected to have a pronounced effect on plankton communities, many components of the plankton seem fairly robust towards realistic end-of-century acidification conditions. However, interactions of the two stressors and the inclusion of further factors such as nutrient concentration and trophic interactions are expected to change this outcome. We investigated the effects of warming and high CO2 on a nutrient-deplete late summer plankton community from the Kiel Fjord, Baltic Sea, using a mesocosm setup crossing two temperatures with a gradient of CO2. Phytoplankton and microzooplankton (MZP) growth rates as well as biomass, taxonomic composition, and grazing rates of MZP were analysed. We observed effects of high CO2, warming, and their interactions on all measured parameters. The occurrence and direction of the effects were dependent on the phytoplankton or MZP community composition. In addition, the abundance of small-sized phytoplankton was identified as one of the most important factors in shaping the MZP community composition. Overall, our results indicate that an estuarine MZP community used to strong natural fluctuations in CO2 can still be affected by a moderate increase in CO2 if it occurs in combination with warming and during a nutrient-deplete post-bloom situation. This highlights the importance of including trophic interactions and seasonality aspects when assessing climate change effects on marine zooplankton communities.
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    Cold-water coral reefs thriving under hypoxia (2020)
    Springer
    Details
    Publication Date: 2023-02-08
    Description: Reefs formed by scleractinian cold-water corals represent unique biodiversity hot spots in the deep sea, preferring aphotic water depths of 200–1000 m. The distribution of the most prominent reef-building species Lophelia pertusa is controlled by various environmental factors including dissolved oxygen concentrations and temperature. Consequently, the expected ocean deoxygenation and warming triggered by human-induced global change are considered as a serious threat to cold-water coral reefs. Here, we present results on recently discovered reefs in the SE Atlantic, where L. pertusa thrives in hypoxic and rather warm waters. This sheds new light on its capability to adapt to extreme conditions, which is facilitated by high surface ocean productivity, resulting in extensive food supply. Putting our data in an Atlantic-wide perspective clearly demonstrates L. pertusa’s ability to develop population-specific adaptations, which are up to now hardly considered in assessing its present and future distributions.
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    3D Characterization of a Coastal Freshwater Aquifer in SE Malta (Mediterranean Sea) by Time-Domain Electromagnetics (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Electromagnetic (EM) geophysical methods are well equipped to distinguish electrical resistivity contrasts between freshwater-saturated and seawater-saturated formations. Beneath the semi-arid, rapidly urbanizing island of Malta, offshore groundwater is an important potential resource but it is not known whether the regional mean sea-level aquifer (MSLA) extends offshore. To address this uncertainty, land-based alongshore and across-shore time-domain electromagnetic (TDEM) responses were acquired with the G-TEM instrument (Geonics Ltd., Mississauga, ON, Canada) and used to map the onshore structure of the aquifer. 1-D inversion results suggest that the onshore freshwater aquifer resides at 4–24 m depth, underlain by seawater-saturated formations. The freshwater aquifer thickens with distance from the coastline. We present 2D and 3D electromagnetic forward modeling based on finite-element (FE) analysis to further constrain the subsurface geometry of the onshore freshwater body. We interpret the high resistivity zones that as brackish water-saturated bodies are associated with the mean sea-level aquifer. Generally, time-domain electromagnetic (TDEM) results provide valuable onshore hydrogeological information, which can be augmented with marine and coastal transition-zone measurements to assess potential hydraulic continuity of terrestrial aquifers extending offshore.
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    Biological Activities of Two Major Copaiba Diterpenoids and Their Semi-synthetic Derivatives (2020)
    Springer
    Details
    Publication Date: 2023-02-08
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    Integrating Molecular Networking and 1H NMR Spectroscopy for Isolation of Bioactive Metabolites from the Persian Gulf Sponge Axinella sinoxea (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: The geographic position, highly fluctuating sea temperatures and hypersalinity make Persian Gulf an extreme environment. Although this unique environment has high biodiversity dominated by invertebrates, its potential in marine biodiscovery has largely remained untapped. Herein, we aimed at a detailed analysis of the metabolome and bioactivity profiles of the marine sponge Axinella sinoxea collected from the northeast coast of the Persian Gulf in Iran. The crude extract and its Kupchan subextracts were tested in multiple in-house bioassays, and the crude extract and its CHCl3-soluble portion showed in vitro antibacterial activity against Methicillin-resistant Staphylococcus aureus (MRSA) and Enterococcus faecium (Efm). A molecular networking (MN)-based dereplication strategy by UPLC-MS/MS revealed the presence of phospholipids and steroids, while 1H NMR spectroscopy indicated the presence of additional metabolites, such as diketopiperazines (DKPs). Integrated MN and 1H NMR analyses on both the crude and CHCl3 extracts combined with an antibacterial activity-guided isolation approach afforded eight metabolites: a new diketopiperazine, (-)-cyclo(L-trans-Hyp-L-Ile) (8); a known diketopiperazine, cyclo(L-trans-Hyp-L-Phe) (7); two known phospholipids, 1-O-hexadecyl-sn-glycero-3-phosphocholine (1) and 1-O-octadecanoyl-sn-glycero-3-phosphocholine (2); two known steroids, 3β-hydroxycholest-5-ene-7,24-dione (3) and (22E)-3β-hydroxycholesta-5,22-diene-7,24-dione (4); two known monoterpenes, loliolide (5) and 5-epi-loliolide (6). The chemical structures of the isolates were elucidated by a combination of NMR spectroscopy, HRMS and [α]D analyses. All compounds were tested against MRSA and Efm, and compound 3 showed moderate antibacterial activity against MRSA (IC50 value 70 μg/mL). This is the first study that has dealt with chemical and bioactivity profiling of A. sinoxea leading to isolation and characterization of pure sponge metabolites.
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    Nutrient Release Dynamics Associated with Native and Invasive Leaf Litter Decomposition: A Mesocosm Experiment (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Leaf litter contributes to the functioning of aquatic ecosystems through allochthonous inputs of carbon, nitrogen, and other elements. Here, we examine leaf litter nutrient inputs and decomposition associated with four plant species using a mesocosm approach. Native sycamore fig Ficus sycomorus L., and silver cluster–leaf Terminalia sericea Burch. ex DC. decomposition dynamics were compared to invasive tickberry Lantana camara L. and guava Psidium guajava L., whereby phosphate, nitrate, nitrite, silicate, and ammonium releases were quantified over time. Leaf inputs significantly reduced pH, with reductions most marked by invasive L. camara. Conductivity was heightened by all leaf input treatments, except native T. sericea. Leaf inputs significantly affected all nutrient levels monitored in the water over time, except for silicate. In particular, leaf litter from invasive L. camara drove significantly increased nutrient concentrations compared to other native plant species, whilst effects of invasive P. guajava were less statistically clear. The end weights of the leaf litter demonstrated decomposition differences among the species types, following a decreasing order of P. guajava 〉 T. sericea 〉 F. sycomorus 〉 L. camara, further suggesting high organic inputs from invasive L. camara. The study results highlight that differential leaf litter decomposition rates of four plant species can play a significant role in nutrient release, in turn altering aquatic ecosystem productivity. However, these effects likely depend on species-specific differences, rather than between invasive–native species generally. Shifting terrestrial plant communities may alter aquatic community composition, but specific effects are likely associated with leaf traits
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    Salinity Blases and the Variablity of the Atlantic Meridional Overturning Circulation in GFDL-CM3 (2020)
    Korea Ocean Research and Development Institute | Springer
    Details
    Publication Date: 2023-02-08
    Description: The variability of the Atlantic Meridional Overturning Circulation (AMOC) and the Meridional Freshwater Transport (Mov) at 24°N, 11°S, and 30°S, simulated with the GFDL-CM3 model under the historical (1860–2005) and RCP 4.5 and 8.5 scenarios (2006–2100) are examined. The results are compared with the climatology and observations in the search for salinity biases that would compromise the accuracy of the state of the future climate predicted by this model. The AMOC wavelet analysis shows a predominant decadal variability at 24°N, whereas the annual signal is more prominent in the South Atlantic. The Mov magnitude varies considerably among the latitudes: increasing at 24°N, rather stable at 11°S and decreasing at 30°S. Such a pattern is followed by an AMOC weakening regardless of the latitude until the end of the 21st century, indicating that a reduction in Mov in the southern South Atlantic and an increase in the North Atlantic are potential drivers of the AMOC destabilization. Both model and observations agree on the stability of the circulation, even though the model projects a stronger AMOC than the latter. Besides the AMOC weakening, a shoaling of its upper limb is also observed. Salinity biases were found mostly in the South Atlantic in the upper 1000 m of the water column, with the model results significantly deviating from the observations and climatology in the mid-Atlantic, especially at 30°S. Possible causes for the abovementioned results, including potential drivers for salinity biases are discussed.
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    Chemically Mediated Microbial “Gardening” Capacity of a Seaweed Holobiont Is Dynamic (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Terrestrial plants are known to “garden” the microbiota of their rhizosphere via released metabolites (that can attract beneficial microbes and deter pathogenic microbes). Such a “gardening” capacity is also known to be dynamic in plants. Although microbial “gardening” has been recently demonstrated for seaweeds, we do not know whether this capacity is a dynamic property in any aquatic flora like in terrestrial plants. Here, we tested the dynamic microbial “gardening” capacity of seaweeds using the model invasive red seaweed Agarophyton vermiculophyllum. Following an initial extraction of surface-associated metabolites (immediately after field collection), we conducted a long-term mesocosm experiment for 5 months to test the effect of two different salinities (low = 8.5 and medium = 16.5) on the microbial “gardening” capacity of the alga over time. We tested “gardening” capacity of A. vermiculophyllum originating from two different salinity levels (after 5 months treatments) in settlement assays against three disease causing pathogenic bacteria and seven protective bacteria. We also compared the capacity of the alga with field-collected samples. Abiotic factors like low salinity significantly increased the capacity of the alga to deter colonization by pathogenic bacteria while medium salinity significantly decreased the capacity of the alga over time when compared to field-collected samples. However, capacity to attract beneficial bacteria significantly decreased at both tested salinity levels when compared to field-collected samples. Dynamic microbial “gardening” capacity of a seaweed to attract beneficial bacteria and deter pathogenic bacteria is demonstrated for the first time. Such a dynamic capacity as found in the current study could also be applicable to other aquatic host–microbe interactions. Our results may provide an attractive direction of research towards manipulation of salinity and other abiotic factors leading to better defended A. vermiculophyllum towards pathogenic bacteria thereby enhancing sustained production of healthy A. vermiculophyllum in farms
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    Culture-Dependent Microbiome of the Ciona intestinalis Tunic: Isolation, Bioactivity Profiling and Untargeted Metabolomics (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Ascidians and their associated microbiota are prolific producers of bioactive marine natural products. Recent culture-independent studies have revealed that the tunic of the solitary ascidian Ciona intestinalis (sea vase) is colonized by a diverse bacterial community, however, the biotechnological potential of this community has remained largely unexplored. In this study, we aimed at isolating the culturable microbiota associated with the tunic of C. intestinalis collected from the North and Baltic Seas, to investigate their antimicrobial and anticancer activities, and to gain first insights into their metabolite repertoire. The tunic of the sea vase was found to harbor a rich microbial community, from which 89 bacterial and 22 fungal strains were isolated. The diversity of the tunic-associated microbiota differed from that of the ambient seawater samples, but also between sampling sites. Fungi were isolated for the first time from the tunic of Ciona. The proportion of bioactive extracts was high, since 45% of the microbial extracts inhibited the growth of human pathogenic bacteria, fungi or cancer cell lines. In a subsequent bioactivity-and metabolite profiling-based approach, seven microbial extracts were prioritized for in-depth chemical investigations. Untargeted metabolomics analyses of the selected extracts by a UPLC-MS/MS-based molecular networking approach revealed a vast chemical diversity with compounds assigned to 22 natural product families, plus many metabolites that remained unidentified. This initial study indicates that bacteria and fungi associated with the tunic of C. intestinalis represent an untapped source of putatively new marine natural products with pharmacological relevance.
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    Discovery of Ancient Volcanoes in the Okhotsk Sea (Russia): New Constraints on the Opening History of the Kurile Back Arc Basin (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Here we present the first radiometric age and geochemical (major and trace element and isotope) data for samples from the Hydrographer Ridge, a back arc volcano of the Kurile Island Arc, and a newly discovered chain of volcanoes (“Sonne Volcanoes”) on the northwestern continental slope of the Kurile Basin on the opposite side of the arc. The 40Ar/39Ar age and geochemical data show that Hydrographer Ridge (3.2–3.3 Ma) and the “Sonne Volcanoes” (25.3–25.9 Ma) have very similar trace element and isotope characteristics to those of the Kurile Island Arc, indicating derivation from a common magma source. We conclude that the age of the “Sonne Volcanoes” marks the time of opening of the Kurile Basin, implying slow back arc spreading rates of 1.3–1.8 cm/y. Combined with published data from the Kurile fore arc, our data suggest that the processes of subduction, Kurile Basin opening and frontal arc extension occurred synchronously and that extension in the rear part and in the frontal part of the Kurile Island Arc must have been triggered by the same mechanism.
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    Comparative Microbiome and Metabolome Analyses of the Marine Tunicate Ciona intestinalis from Native and Invaded Habitats (2020)
    MDPI
    Details
    Publication Date: 2023-02-08
    Description: Massive fouling by the invasive ascidian Ciona intestinalis in Prince Edward Island (PEI, Canada) has been causing devastating losses to the local blue mussel farms. In order to gain first insights into so far unexplored factors that may contribute to the invasiveness of C. intestinalis in PEI, we undertook comparative microbiome and metabolome studies on specific tissues from C. intestinalis populations collected in invaded (PEI) and native regions (Helgoland and Kiel, Germany). Microbial community analyses and untargeted metabolomics revealed clear location- and tissue-specific patterns showing that biogeography and the sampled tissue shape the microbiome and metabolome of C. intestinalis. Moreover, we observed higher microbial and chemical diversity in C. intestinalis from PEI than in the native populations. Bacterial OTUs specific to C. intestinalis from PEI included Cyanobacteria (e.g., Leptolyngbya sp.) and Rhodobacteraceae (e.g., Roseobacter sp.), while populations from native sampling sites showed higher abundances of e.g., Firmicutes (Helgoland) and Epsilonproteobacteria (Kiel). Altogether 121 abundant metabolites were putatively annotated in the global ascidian metabolome, of which 18 were only detected in the invasive PEI population (e.g., polyketides and terpenoids), while six (e.g., sphingolipids) or none were exclusive to the native specimens from Helgoland and Kiel, respectively. Some identified bacteria and metabolites reportedly possess bioactive properties (e.g., antifouling and antibiotic) that may contribute to the overall fitness of C. intestinalis. Hence, this first study provides a basis for future studies on factors underlying the global invasiveness of Ciona species
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    Isolation of a host-confined phage metagenome allows the detection of phages both capable and incapable of plaque formation (2023)
    Springer
    Details
    Publication Date: 2023-02-16
    Description: Bacteriophages, also called phages, are viruses of bacteria. They are the most common and diverse biological entities on this planet. For metagenomic investigation, their diversity is also their biggest obstacle. The direct metagenomic sequence of environmental phage communities often leads to short genomic fragments limiting the investigation to a few individual aspects of phage biology and diversity. The presented protocol for generating a host-associated metagenome reduces the phage diversity to a concise and accessible size. Metagenome sequencing often leads to complete genomes, and the availability of a suitable host system ensures further experimental investigation.
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    Caught on camera: Widespread direct evidence of illegal discards in coastal waters of the Western Baltic Sea (2023)
    Springer
    Details
    Publication Date: 2023-03-16
    Description: Most fish stocks in the European Union (EU) are still being overfished. One recent measure of the EU common fisheries policy to curb overfishing is the introduction of landing obligations that are meant to reduce discards, but the success of landing obligations is controversial, as discards still take place. In the German Western Baltic Sea , discards are currently estimated using ship observer data, but vessels 〈12 m are not sufficiently controlled. We here use an independent method and document widespread discard of undersized cod and flatfish in late summer 2018 using video transects. Discards along the coastline of the south-western Baltic Sea amount to an extrapolated 14.0 t of cod and 1.0 t of flatfish decomposing on the sea floor in 1-13 m depth in a subarea of Mecklenburg Bight that covers only 2.3% of ICES (International Council for the Exploration of the Sea ) subdivisions 22-24, the habitat of Western Baltic cod. Compared to a similar video-mapping seven years earlier (in 2011), the amount of discard increased markedly, suggesting that the implementation of landing obligations in the time between the two mappings for under-sized catches has not resulted in a decrease but an increase of discards. We suggest that higher observed discards of cod in 2018 are also due to a high percentage of cod coming from the 2016-cohort of the Western Baltic cod stock which are just undersized but nevertheless caught by most passive net gear. Our data complement estimates based on ship observer data, while providing the first direct evidence of the fate of discards in the benthic marine habitat.
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    The Diverse Legal and Regulatory Framework for Marine Sustainability Policy in the North Atlantic – Horrendograms as Tools to Assist Circumnavigating Through a Sea of Different Maritime Policies (2023)
    Springer
    Details
    Publication Date: 2023-06-29
    Description: Although considerable progress has been made in the management and planning of the marine environment, important gaps still exist in streamlining policies across governance levels, maritime sectors, and between different countries. This can hinder effective Maritime Spatial Planning (MSP) and prevent harmonious cross-sectoral cooperation, and importantly, cross-border or trans-boundary collaboration. These may in turn have serious implications for overall ocean governance and ultimately, marine sustainability. The North Atlantic presents an ideal case-study region for reviewing these issues: North Atlantic countries have different governance structures, and as such, different approaches to marine policy. Therefore, for an effective marine management, cross-sectoral and cross-border MSP in the region, there is a need to review marine and maritime policies in order to identify differences and commonalities among countries. This chapter reviews major policies for the marine environment in the North Atlantic and assesses where differences between countries exist and at which governance level they are being created. Key research questions include: (i) Are there significant differences in marine policy between North Atlantic countries? Moreover, are there any substantial geographical/political differences? (ii) Are there differences in implementation of key policies? Such an analysis requires a sound framework for comparison among countries. To that end, the use of “horrendograms”, a tool increasingly being used by the marine research and planning community to assess such issues, is adopted. Results indicate that key differences between countries are created primarily at a national level of marine governance. Although differences between countries exist, overall strategic targets are similar. For instance, whilst the political systems of certain North Atlantic countries may differ substantially, key objectives for major sectors, such as fisheries and conservation, are similar – even when such objectives are implemented at different levels. Findings from the study can enable targeted policy intervention and, as such, assist the development of future outlooks of ocean governance in the region. Results can also aid the development of future visions and scenarios for MSP in the Atlantic region.
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    Für ein gutes Miteinander auf See. Eine Initiative zur Prävention von sexualisierten Grenzverletzungen auf Forschungsfahrten (2023)
    Springer
    Details
    Publication Date: 2023-07-03
    Description: "Für ein gutes Miteinander auf See“ ist eine Initiative am GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, die sich der Prävention von sexualisierter Belästigung, Diskriminierung und Gewalt (SBDG) auf deutschen Forschungsschiffen widmet. Geleitet wird die Initiative vom Gleichstellungsteam, das in der komplexen Organisationsstruktur der Forschungsschifffahrt viele Akteur*innen zusammenbringen muss, um die Maßnahmen passgenau zu entwickeln und zu etablieren. Auf Forschungsfahrten sind die Menschen für einen längeren Zeitraum auf engem Raum zusammen und können unerwünschten Situationen nicht ausweichen. Das Ziel der Initiative ist es, dafür eine Rettungsinsel zu bieten: Etablierte und klare Strukturen sollen Sicherheit geben und eine Klärung von unerwünschten Situationen ermöglichen. Dieser Beitrag gibt einen Einblick in die Vorgehensweise der Entwicklung der Initiative und erläutert, welche Herausforderungen Forschungsschiffe als Arbeitsort für eine SBDG-Initiative darstellen.
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    Gas Hydrate and Fluid-Related Seismic Indicators Across the Passive and Active Margins off SW Taiwan (2022)
    Springer
    Details
    Publication Date: 2023-09-28
    Description: Well-constrained and widely distributed bottom simulating reflectors in various geological settings across both passive and active margins make the area offshore southwestern Taiwan an excellent location to study gas hydrate dynamics and fluid flow systems. Seismic data reveal the presence of subsurface fluid flow systems and ubiquitous free gas and gas hydrates. This article aims to summarize and map the different types of seismic observations related to the gas hydrate system. The spatial distribution of seismic indicators for gas accumulation, fluid migration, and the presence of gas hydrates suggests that topographic highs on both passive and active margins are sites of particularly efficient free gas accumulation and gas hydrate formation. Seismic indicators observed in fold and thrust structures suggest that the fluid system in the active margin is structurally controlled and that the highest gas hydrate saturation levels are found in the cores of thrust anticlines on the lower slope of the active margin area.
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    Northern Cascadia Margin Gas Hydrates — Regional Geophysical Surveying, IODP Drilling Leg 311 and Cabled Observatory Monitoring (2022)
    Springer
    Details
    Publication Date: 2023-09-28
    Description: This article reviews extensive geophysical survey data, ocean drilling results and long-term seafloor monitoring that constrain the distribution and concentration of gas hydrates within the accretionary prism of the northern Cascadia subduction margin, located offshore Vancouver Island in Canada. Seismic surveys and geologic studies conducted since the 1980s have mapped the bottom simulating reflector (BSR), detected gas hydrate occurrence and estimated gas hydrate and free gas concentrations. Additional constraints were obtained from seafloor-towed, controlled-source electromagnetic surveying. A component of these studies has been the examination of low-temperature seafloor vents and seeps that emit gas and fluids into the ocean. These features are identified seismically as chimney-like zones of reduced acoustic reflectivity within the sediment stratigraphy, functioning as conduits for gas and fluid migration from below the BSR to the seafloor. Gas hydrates have been recovered from the seafloor and from sediment cores at vent sites, mostly in massive (nodular) form and as a vein-like fracture filling. The Ocean Networks Canada cabled NEPTUNE observatory has gathered extensive continuous, long-term observations on gas hydrate dynamics at the seafloor and in boreholes at two nodes on the continental slope featuring high gas hydrate concentrations. Measurements taken at the observatory include a time-series of gas bubble emission rates, changes in the near-seafloor electromagnetic structure and seafloor compliance linked to gas hydrate formation and dissociation. Two Integrated Ocean Drilling Program (IODP) expeditions collected cores, measured downhole properties and deployed downhole instruments within the central accretionary prism. At IODP Site U1364, pore pressures are being monitored above and below the base of the gas hydrate stability zone at a slope setting using an “Advanced Circulation Obviation Retrofit Kit” (A-CORK). Downhole pore pressures, temperatures and electrical resistivities also are being monitored at IODP Site U1416 using the “Simple Cabled Instrument for Measuring Parameters In Situ” (SCIMPI) tool at a vent site from near-seafloor to just above the base of the gas hydrate stability zone.
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    Risk Assessment for Deep-Seabed Mining (2022)
    Springer
    Details
    Publication Date: 2023-10-06
    Description: Uncertainties concerning deep-seabed mining relate to the expected impacts on the abyssal benthic and pelagic environment and its ecosystems but also include geopolitical, economic, societal and cultural uncertainty. The uncertain impacts from mining lead to anxiety and a low societal acceptance for the activity and are not the same for everybody at the same time. Hence, uncertainty is an important element of the risk involved in deep-seabed mining. This chapter describes the different risks involved, develops a methodology for risk assessment for the exploitation of marine mineral resources that takes into consideration the state of knowledge and evolving research on deep-sea ecosystems, and informs on possible environmental threshold values in relation to deep-seabed mining operations.
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    First Evidence of Bottom Simulation Reflectors in the Western Indian Ocean Offshore Tanzania (2022)
    Springer
    Details
    Publication Date: 2023-10-06
    Description: This article presents the first evidence of bottom simulating reflectors (BSRs) on the continental margin of the western Indian Ocean, offshore Tanzania. The analysis of 2D and 3D seismic reflection data revealed two different types of BSRs. The Type 1 BSR, identified in water depths of 2250–2370 m west of the Seagap fault, shows a continuous reflection that mimics the seafloor, has a reverse polarity with respect to the seafloor and crosscuts the stratigraphy. Type 2 BSRs have been identified on the slope of the Tanzanian margin in water depths less than 1500 m. They are represented by a phase-reversed reflection that mimics the seafloor topography, revealing lateral variations in amplitude that are expressed as changes from high to moderate brightness. Modelling results show that gas hydrates of microbial origin (100% CH4) are stable in a minimum water depth of 740 m and a bottom water temperature of 9 °C, thus indicating a possible microbial origin for the type 2 BSRs. The thickest gas hydrate stability zone is observed within the Kerimbas Graben at water depths of up to 3621 m, with values ranging from 321.4–383.4 m for geothermal gradients of 5.4 °C/100 m and 6.4 °C/100 m, respectively. We suggest that the type 1 BSR may have a thermogenic gas source, as the observed BSR depths are deeper than the calculated base of the gas hydrate stability zone for 100% methane. The interpreted faults that crosscut the stratigraphy may have facilitated gas transport from deeper source rocks.
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    The Exact Query Complexity of Yes-No Permutation Mastermind (2020)
    MDPI
    Details
    Publication Date: 2023-11-03
    Description: Mastermind is famous two-player game. The first player (codemaker) chooses a secret code which the second player (codebreaker) is supposed to crack within a minimum number of code guesses (queries). Therefore, the codemaker’s duty is to help the codebreaker by providing a well-defined error measure between the secret code and the guessed code after each query. We consider a variant, called Yes-No AB-Mastermind, where both secret code and queries must be repetition-free and the provided information by the codemaker only indicates if a query contains any correct position at all. For this Mastermind version with n positions and 𝑘≥𝑛 colors and ℓ:=𝑘+1−𝑛, we prove a lower bound of ∑𝑘𝑗=ℓlog2𝑗 and an upper bound of 𝑛log2𝑛+𝑘 on the number of queries necessary to break the secret code. For the important case 𝑘=𝑛, where both secret code and queries represent permutations, our results imply an exact asymptotic complexity of Θ(𝑛log𝑛) queries.
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    Walker Circulation controls ENSO Atmospheric Feedbacks in Uncoupled and Coupled Climate Model Simulations (2020)
    Springer
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    Publication Date: 2023-11-08
    Description: Many climate models strongly underestimate the two most important atmospheric feedbacks operating in El Niño/Southern Oscillation (ENSO), the positive (amplifying) zonal surface wind feedback and negative (damping) surface-heat flux feedback (hereafter ENSO atmospheric feedbacks, EAF), hampering realistic representation of ENSO dynamics in these models. Here we show that the atmospheric components of climate models participating in the 5th phase of the Coupled Model Intercomparison Project (CMIP5) when forced by observed sea surface temperatures (SST), already underestimate EAF on average by 23%, but less than their coupled counterparts (on average by 54%). There is a pronounced tendency of atmosphere models to simulate stronger EAF, when they exhibit a stronger mean deep convection and enhanced cloud cover over the western equatorial Pacific (WEP), indicative of a stronger rising branch of the Pacific Walker Circulation (PWC). Further, differences in the mean deep convection over the WEP between the coupled and uncoupled models explain a large part of the differences in EAF, with the deep convection in the coupled models strongly depending on the equatorial Pacific SST bias. Experiments with a single atmosphere model support the relation between the equatorial Pacific atmospheric mean state, the SST bias and the EAF. An implemented cold SST bias in the observed SST forcing weakens deep convection and reduces cloud cover in the rising branch of the PWC, causing weaker EAF. A warm SST bias has the opposite effect. Our results elucidate how biases in the mean state of the PWC and equatorial SST hamper a realistic simulation of the EAF.
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    Herausforderungen bei der Unterwasser-Visuellen Navigation und SLAM (2023)
    Springer
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    Publication Date: 2023-12-08
    Description: Dieses Kapitel behandelt die visuelle Navigation von autonomen Unterwasserfahrzeugen (AUVs) mit und ohne gegebene Karte, wobei Letzteres als Simultane Lokalisierung und Kartierung (SLAM) bezeichnet wird. Wir fassen die Herausforderungen und Möglichkeiten in Unterwasserumgebungen zusammen, die die visuelle Navigation von der Landnavigation unterscheiden, und geben auch einen kurzen Überblick über den aktuellen Stand der Technik in diesem Bereich. Dann argumentieren wir als Positionspapier, warum viele dieser Herausforderungen durch eine angemessene Modellierung von Unsicherheiten in der SLAM-Darstellung bewältigt werden könnten. Dies würde insbesondere dem SLAM-Algorithmus ermöglichen, die Mehrdeutigkeit zwischen „Ich sehe das gleiche Merkmal wieder“, „Ich sehe ein anderes, aber ähnlich aussehendes Merkmal“ und „Die Umgebung hat sich verändert und das Merkmal hat sich bewegt“ gründlich zu behandeln.
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    Octopus crawling on land: physiological and biochemical responses of Octopus vulgaris to emersion (2024)
    Springer
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    Publication Date: 2023-12-18
    Description: Cephalopods are well known for their cognitive capabilities and unique behavioural repertoires. Yet, certain life strategies and behaviours are still not fully understood. For instance, coastal octopuses have been documented (mainly through citizen science and TV documentaries) to occasionally leave the water and crawl in intertidal areas. Yet, there is a complete lack of knowledge on this behaviour's physiological and biochemical basis. Within this context, this study aimed to investigate, for the first time, physiological (routine and maximum metabolic rates and aerobic scope) and biochemical (i.e., antioxidant enzymes activities, heat shock protein and ubiquitin levels, DNA damage, lipid peroxidation) responses of the common octopus, Octopus vulgaris, to emersion. The octopuses’ physiological performance was determined by measuring metabolic rates in different emersion treatments and biochemical markers. The size-adjusted maximum metabolic rates (MMRadj) of octopuses exposed to 2:30 min of air exposure followed by re-immersion did not differ significantly from the MMRadj of the chased individuals (control group). Yet, most biochemical markers revealed no significant differences among the different emersion treatments. Our findings showed that O. vulgaris could tolerate exposure to short-term emersion periods due to an efficient antioxidant machinery and cellular repair mechanisms. Alongside, we argue that the use of atmospheric air through the mucus-covered gills and/or cutaneous respiration may also help octopus withstand emersion and crawling on land.
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    Evaluating species richness using proteomic fingerprinting and DNA barcoding — a case study on meiobenthic copepods from the Clarion Clipperton Fracture Zone (2022)
    Springer
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    Publication Date: 2024-01-08
    Description: The Clarion Clipperton Fracture Zone (CCZ) is a vast deep-sea region harboring a highly diverse benthic fauna, which will be affected by potential future deep-sea mining of metal-rich polymetallic nodules. Despite the need for conservation plans and monitoring strategies in this context, the majority of taxonomic groups remain scientifically undescribed. However, molecular rapid assessment methods such as DNA barcoding and Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) provide the potential to accelerate specimen identification and biodiversity assessment significantly in the deep-sea areas. In this study, we successfully applied both methods to investigate the diversity of meiobenthic copepods in the eastern CCZ, including the first application of MALDI-TOF MS for the identification of these deep-sea organisms. Comparing several different species delimitation tools for both datasets, we found that biodiversity values were very similar, with Pielou’s evenness varying between 0.97 and 0.99 in all datasets. Still, direct comparisons of species clusters revealed differences between all techniques and methods, which are likely caused by the high number of rare species being represented by only one specimen, despite our extensive dataset of more than 2000 specimens. Hence, we regard our study as a first approach toward setting up a reference library for mass spectrometry data of the CCZ in combination with DNA barcodes. We conclude that proteome fingerprinting, as well as the more established DNA barcoding, can be seen as a valuable tool for rapid biodiversity assessments in the future, even when no reference information is available.
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    Influence of the Atlantic Multidecadal Oscillation on South American Atmosphere Dynamics and Precipitation (2022)
    MDPI
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    Publication Date: 2024-01-08
    Description: The Atlantic Multidecadal Oscillation (AMO) is coherently linked to climate variations over many parts of the globe. Despite recent achievements, the mechanism by which the AMO influences regional precipitation over South America is not well understood. In this study, we isolate the atmospheric response to the AMO using a water isotope-enabled version of the Community Earth System Model version 1.2 (iCESM1.2) and determine its influence on (sub)tropical South American regional precipitation and atmospheric circulation. The results suggest an interhemispheric seesaw in Hadley circulation strength and that the section of the Atlantic Hadley cell is marked by a stronger upward air component south of the equator during the cold AMO phase. We also find that the precipitation anomalies over (sub)tropical South America during AMO phases are mainly related to changes in the Atlantic Intertropical Convergence Zone (ITCZ) core strength, where in the cold (warm) AMO phase the core region strengthens (weakens) from February to July, while from July to November the core region weakens (strengthens). Our results stress the importance of acknowledging the dynamics of season- and regional-dependent ITCZ responses, as they are sufficient to produce observed AMO-related signals even in the absence of marked changes in the ITCZ position.
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    Geomorphological Data from Detonation Craters in the Fehmarn Belt, German Baltic Sea (2022)
    MDPI
    Details
    Publication Date: 2024-01-08
    Description: Military munitions from World War I and II dumped at the seafloor are a threat to the marine environment and its users. Decades of saltwater exposure make the explosives fragile and difficult to dispose of. If required, the munition is blast-in-place. In August 2019, 42 ground mines were detonated in a controlled manner underwater during a NATO maneuver in the German Natura2000 Special Area of Conservation Fehmarn Belt, the Baltic Sea. In June 2020, four detonation craters were investigated with a multibeam echosounder for the first time. This dataset is represented here as maps of bathymetry, slope angle, and height difference to the surrounding. The circular craters were still clearly visible a year after the detonation. The diameter and depth of the structures were between 7.5–12.6 m and 0.7–2.2 m, respectively. In total, about 321 m2 of the seafloor was destroyed along the track line.
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    Taxonomic assessment of deep-sea decapod crustaceans collected from polymetallic nodule fields of the East Pacific Ocean using an integrative approach (2022)
    Springer
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    Publication Date: 2024-01-08
    Description: Deep-sea decapod crustaceans (Crustacea: Decapoda) collected during nine research cruises to the Clarion-Clipperton Zone (CCZ) in the NE Pacific Ocean and the Peru Basin in the SE Pacific Ocean were studied comprehensively using an integrative taxonomic approach. The abyssal seafloors of both areas are rich in economically interesting polymetallic nodules. All specimens were morphologically identified and genetically analysed using a fragment of the mitochondrial cytochrome c oxidase subunit I (COI). Eight species were collected, comprising three anomurans, three carideans, one dendrobranchiate, and one brachyuran, from water depths ranging between 4089 and 4511 m. COI sequences for representatives of the genera Parapagurus Smith, 1879, Ethusina SI Smith, 1884, and Bathystylodactylus Hanamura & Takeda, 1996 are provided for the first time. The molecular barcodes of the species provided herein will be valuable for the full taxonomic assignment of sequences produced in future metabarcoding and eDNA monitoring work. The new records extend the geographical distributional ranges or fill geographical gaps of the species reported, although none of the species is endemic to polymetallic nodule areas. This study is part of a taxonomic series aiming to describe the biodiversity of areas targeted for future deep-sea mining.
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    A metabologenomics approach to unlock the metabolome of the novel Antarctic deep-sea isolate Lacinutrix shetlandiensis sp. nov. WUR7 (2023)
    National Academy of Sciences
    Details
    Publication Date: 2024-01-08
    Description: The South Shetland Trough, Antarctica, is an underexplored region for microbiological and biotechnological exploitation. Herein, we describe the isolation and characterization of the novel bacterium Lacinutrix shetlandiensis sp. nov. WUR7 from a deep-sea environment. We explored its chemical diversity via a metabologenomics approach, wherein the OSMAC strategy was strategically employed to upregulate cryptic genes for secondary metabolite production. Based on hybrid de novo whole genome sequencing and digital DNA–DNA hybridization, isolate WUR7 was identified as a novel species from the Gram-negative genus Lacinutrix. Its genome was mined for the presence of biosynthetic gene clusters with limited results. However, extensive investigation of its metabolism uncovered an unusual tryptophan decarboxylase with high sequence homology and conserved structure of the active site as compared to ZP_02040762, a highly specific tryptophan decarboxylase from Ruminococcus gnavus. Therefore, WUR7's metabolism was directed toward indole-based alkaloid biosynthesis by feeding it with L-tryptophan. As expected, its metabolome profile changed dramatically, by triggering the extracellular accumulation of a massive array of metabolites unexpressed in the absence of tryptophan. Untargeted LC-MS/MS coupled with molecular networking, followed along with chemoinformatic dereplication, allowed for the annotation of 10 indole alkaloids, belonging to β-carboline, bisindole, and monoindole classes, alongside several unknown alkaloids. These findings guided us to the isolation of a new natural bisindole alkaloid 8,9-dihydrocoscinamide B (1), as the first alkaloid from the genus Lacinutrix, whose structure was elucidated on the basis of extensive 1D and 2D NMR and HR-ESIMS experiments. This comprehensive strategy allowed us to unlock the previously unexploited metabolome of L. shetlandiensis sp. nov. WUR7.
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    Synthesis and outlook on future research and scientific education in southern Africa (2024)
    Springer
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    Publication Date: 2024-01-07
    Description: The sustainability of southern Africa’s natural and managed marine and terrestrial ecosystems is threatened by overuse, mismanagement, population pressures, degradation, and climate change. Counteracting unsustainable development requires a deep understanding of earth system processes and how these are affected by ongoing and anticipated global changes. This information must be translated into practical policy and management interventions. Climate models project that the rate of terrestrial warming in southern Africa is above the global terrestrial average. Moreover, most of the region will become drier. Already there is evidence that climate change is disrupting ecosystem functioning and the provision of ecosystem services. This is likely to continue in the foreseeable future, but impacts can be partly mitigated through urgent implementation of appropriate policy and management interventions to enhance resilience and sustainability of the ecosystems. The recommendations presented in the previous chapters are informed by a deepened scientific understanding of the relevant earth system processes, but also identify research and knowledge gaps. Ongoing disciplinary research remains critical, but needs to be complemented with cross-disciplinary and transdisciplinary research that can integrate across temporal and spatial scales to give a fuller understanding of not only individual components of the complex earth-system, but how they interact.
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    Unique southern African terrestrial and oceanic biomes and their relation to steep environmental gradients (2024)
    Springer
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    Publication Date: 2024-01-07
    Description: The southern African subcontinent and its surrounding oceans accommodate globally unique ecoregions, characterized by exceptional biodiversity and endemism. This diversity is shaped by extended and steep physical gradients or environmental discontinuities found in both ocean and terrestrial biomes. The region’s biodiversity has historically been the basis of life for indigenous cultures and continues to support countless economic activities, many of them unsustainable, ranging from natural resource exploitation, an extensive fisheries industry and various forms of land use to nature-based tourism. Being at the continent’s southern tip, terrestrial species have limited opportunities for adaptive range shifts under climate change, while warming is occurring at an unprecedented rate. Marine climate change effects are complex, as warming may strengthen thermal stratification, while shifts in regional wind regimes influence ocean currents and the intensity of nutrient-enriching upwelling. The flora and fauna of marine and terrestrial southern African biomes are of vital importance for global biodiversity conservation and carbon sequestration. They thus deserve special attention in further research on the impacts of anthropogenic pressures including climate change. Excellent preconditions exist in the form of long-term data sets of high quality to support scientific advice for future sustainable management of these vulnerable biomes.
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    Thank you to 2022 Ocean Dynamics reviewers (2023)
    Springer
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    Publication Date: 2024-01-12
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    Molecular fossils in reefal carbonates and sponges of the deep fore reef of Mayotte and Mohéli, Comoro Islands, western Indian Ocean (2024)
    Springer
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    Publication Date: 2024-01-12
    Description: Microbial carbonates are common components of Quaternary tropical coral reefs. Previous studies revealed that sulfate-reducing bacteria trigger microbial carbonate precipitation in supposedly cryptic reef environments. Here, using petrography, lipid biomarker analysis, and stable isotope data, we aim to understand the formation mechanism of microbial carbonate enclosed in deep fore reef limestones from Mayotte and Mohéli, Comoro Islands, which differ from other reefal microbial carbonates in that they contain less microbial carbonate and are dominated by numerous sponges. To discern sponge-derived lipids from lipids enclosed in microbial carbonate, lipid biomarker inventories of diverse sponges from the Mayotte and Mohéli reef systems were examined. Abundant peloidal, laminated, and clotted textures point to a microbial origin of the authigenic carbonates, which is supported by ample amounts of mono- O -alkyl glycerol monoethers (MAGEs) and terminally branched fatty acids; both groups of compounds are attributed to sulfate-reducing bacteria. Sponges revealed a greater variety of alkyl chains in MAGEs, including new, previously unknown, mid-chain monomethyl- and dimethyl-branched MAGEs, suggesting a diverse community of sulfate reducers different from the sulfate-reducers favoring microbialite formation. Aside from biomarkers specific for sulfate-reducing bacteria, lipids attributed to demosponges (i.e., demospongic acids) are also present in some of the sponges and the reefal carbonates. Fatty acids attributed to demosponges show a higher diversity and a higher proportion in microbial carbonate compared to sponge tissue. Such pattern reflects significant taphonomic bias associated with the preservation of demospongic acids, with preservation apparently favored by carbonate authigenesis.
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    Discrepancies between non-native and invasive species classifications (2024)
    Springer
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    Publication Date: 2024-02-01
    Description: Biological invasions pose a growing threat to ecosystems, biodiversity, and socio-economic interests. In the European Union, the introduction of non-native species through trade, tourism, and other pathways has led to unintended consequences. Among these non-native species, a subset exhibits negative impacts and is commonly referred to as ‘invasive’. However, the number of non-native species and the proportion considered invasive vary across different member states of the European Union. Classifications and definitions of invasive species also differ among countries potentially leading to an underrepresentation. Here, we use Germany as a case study to highlight gaps in invasive species classifications. The number of non-native species reported as invasive in Germany remains low (~ 14%) compared to other European Union member states (~ 22%), despite Germany’s strong economy, significant research investments, and well-established trade networks. This disparities may be attributed to complex and multifaceted factors, encompassing differences in classifications, variations in research effort and focus, and diverse national priorities. We further propose that the impacts of non-native species on resources and biodiversity may be more likely to be overlooked, principally in large economies reliant on international trade, such as Germany. This oversight could negatively affect conservation efforts and funding for research aimed at improving understanding invasive species threats. We suggest that this underreporting may stem from a focus on maintaining economic growth, which might have taken precedence over addressing the potential ecological and economic impacts of invasive species.
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    Differential effects of microplastic exposure on leaf shredding rates of invasive and native amphipod crustaceans (2024)
    Springer
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    Publication Date: 2024-02-01
    Description: There is growing concern surrounding the pervasive impacts of microplastic pollution, but despite increasing interest in this area there remains limited understanding of its disruption to biological communities and the ecosystem services they provide. One such service is the breakdown of leaf litter in freshwaters by invertebrate shredders, such as Gammarus spp., that directly and indirectly provides resources for many other species. This study investigates the effect of microplastic exposure on leaf consumption by two Gammarus species in Ireland, the native Gammarus duebeni celticus, and the invasive Gammarus pulex. Individuals were exposed to 40-48 mu m polyethylene particles for 24 h at a range of concentrations (20-200,000 MP/L), with the amount of leaf consumption in that time frame recorded. Microplastics did not affect the feeding rate of either species at environmentally relevant concentrations, indicating that ecosystem services currently provided by our study species are sustainable. However, at higher microplastic concentrations the feeding rate of G. d. celticus was significantly reduced, whereas G. pulex remained unaffected, drawing attention to species-specific and native-invader differences in microplastic impacts. The results of our study further contribute to the observed pattern that invasive species, including various amphipod species, often display a higher tolerance to environmental stressors compared to their native counterparts. This research highlights the need for mitigation of ongoing and increasing microplastic pollution that could differentially influence key ecosystem services and functions.
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    Warming, not acidification, favours survival of non-indigenous over native gammarid species (2024)
    Springer
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    Publication Date: 2024-02-01
    Description: Anthropogenic disturbances, including non-indigenous species (NIS) and climate change, have considerably affected ecosystems and socio-economies globally. Despite the widely acknowledged individual roles of NIS and global warming in biodiversity change, predicting the connection between the two still remains a fundamental challenge and requires urgent attention due to a timely importance for proper conservation management. To improve our understanding of the interaction between climate change and NIS on biological communities, we conducted laboratory experiments to test the temperature and pCO2 tolerance of four gammarid species: two native Baltic Sea species (Gammarus locusta and G. salinus), one Ponto‐Caspian NIS (Pontogammarus maeoticus) and one North American NIS (Gammarus tigrinus). Our results demonstrated that an increase in pCO2 level was not a significant driver of mortality, neither by itself nor in combination with increased temperature, for any of the tested species. However, temperature was significant, and differentially affected the tested species. The most sensitive was the native G. locusta which experienced 100% mortality at 24 °C. The second native species, G. salinus, performed better than G. locusta, but was still significantly more sensitive to temperature increase than either of the NIS. In contrast, NIS performed better than native species with warming, whereby particularly the Ponto-Caspian P. maeoticus did not demonstrate any difference in its performance between the temperature treatments. With the predicted environmental changes in the Baltic Sea, we may expect shifts in distributions of native taxa towards colder areas, while their niches might be filled by NIS, particularly those from the Ponto-Caspian region. Although, northern colder areas may be constrained by lower salinity. Additional studies are needed to confirm our findings across other NIS, habitats and regions to make more general inferences.
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    Long-term climate change impacts on regional sterodynamic sea level statistics analyzed from the MPI-ESM large ensemble simulation (2024)
    Springer
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    Publication Date: 2024-02-01
    Description: Statistics of regional sterodynamic sea level variability are analyzed in terms of probability density functions of a 100-member ensemble of monthly mean sea surface height (SSH) timeseries simulated with the low-resolution Max Planck Institute Grand Ensemble. To analyze the impact of climate change on sea level statistics, fields of SSH variability, skewness and excess kurtosis representing the historical period 1986-2005 are compared with similar fields from projections for the period 2081-2100 under moderate (RCP4.5) and strong (RCP8.5) climate forcing conditions. Larger deviations of the models SSH statistics from Gaussian are limited to the western and eastern tropical Pacific. Under future climate warming conditions, SSH variability of the western tropical Pacific appear more Gaussian in agreement with weaker zonal easterly wind stress pulses, suggesting a reduced El Nino Southern Oscillation activity in the western warm pool region. SSH variability changes show a complex amplitude pattern with some regions becoming less variable, e.g., off the eastern coast of the north American continent, while other regions become more variable, notably the Southern Ocean. A west (decrease)-east (increase) contrast in variability changes across the subtropical Atlantic under RCP8.5 forcing is related to changes in the gyre circulation and a declining Atlantic Meridional Overturning Circulation in response to external forcing changes. In addition to global mean sea-level rise of 16 cm for RCP4.5 and 24 cm for RCP8.5, we diagnose regional changes in the tails of the probability density functions, suggesting a potential increased in variability-related extreme sea level events under global warmer conditions.
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    Geoengineering: Methods, Associated Risks and International Liability (2022)
    Springer
    Details
    Publication Date: 2024-02-02
    Description: Climate change arguably constitutes one of the greatest risks to the long-term health of the world’s environment. In 2015, the Intergovernmental Panel on Climate Change (IPCC) highlighted that the Earth’s climate system has consistently been warming since the 1950s and that a “large fraction of anthropogenic climate change resulting from CO2 emissions is irreversible on a multi-century to millennial time scale, except in the case of a large net removal of CO2 from the atmosphere over a sustained period”. Initial responses to climate change revolved around States attempting to reduce, rather than remove, greenhouse gas emissions. However, as the global economy expands, greenhouse gas emissions have continued to rise and cooperative arrangements aimed at reducing emissions have had limited, if any, impact. If recent predictions are to be believed, the remaining “carbon budget” needed to prevent average global temperatures from increasing by more than 1.5 °C may be exhausted by 2030. Climate Analytics estimates that the current Nationally Determined Contributions (NDCs) made by States under the Paris Agreement indicate that average global temperatures will rise by 2.8 °C by 2100—almost double the stipulated efforts to limit the temperature increase to 1.5 °C above pre-industrial levels mentioned in Article 2(1)(a) of the Paris Agreement. The recent IPCC Special Report on 1.5 °C Global Warming concludes that without “increased and urgent mitigation ambition in the coming years, leading to a sharp decline in greenhouse gas emissions by 2030, global warming will [cause] irreversible loss of the most fragile ecosystems and crisis after crisis for the most vulnerable people and societies”.
    Type: Book chapter , NonPeerReviewed
    Format: text
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    Vertical distribution of epibenthic megafauna of a large seamount west of Cape Verde islands (tropical North Atlantic) (2024)
    Springer
    Details
    Publication Date: 2024-02-05
    Description: Seamounts are thought to function as hotspots of megafauna diversity due to their topology and environmental characteristics. However, assessments of megafauna communities inhabiting seamounts, including diversity and density, are scarce. In this study, we provide megafauna diversity and density estimates for a recently discovered, not yet characterized seamount region (Boetius seamounts) west of Cape Verde (N17° 16′, W29° 26′). We investigated the distribution of epibenthic megafauna over a large depth gradient from the seamount’s summit at 1400 m down to 3200 m water depth and provided qualitative and quantitative analyses based on quantified video data. In utilizing an ocean floor observation system (OFOS), calibrated videos were taken as a horizontal transect from the north-eastern flank of the seamount, differentiating between an upper, coral-rich region (−1354/−2358 m) and a deeper, sponge-rich region (−2358/−3218 m). Taxa were morphologically distinguished, and their diversity and densities were estimated and related to substrate types. Both the upper and deeper seamount region hosted unique communities with significantly higher megafauna richness at the seamount’s summit. Megafauna densities differed significantly between the upper (0.297 ± 0.167 Ind./m 2 ) and deeper community (0.112 ± 0.114 Ind./m). The seamount showed a vertical zonation with dense aggregations of deep-sea corals dominating the seamount’s upper region and colonies of the glass sponges Poliopogon amadou dominating the deeper region. The results are discussed in light of detected substrate preferences and co-occurrence of species and are compared with findings from other Atlantic seamounts.
    Type: Article , PeerReviewed
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    Format: text
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    The Agulhas Current System as an important driver for oceanic and terrestrial climate (2024)
    Springer
    Details
    Publication Date: 2024-02-06
    Type: Book chapter , PeerReviewed
    Format: text
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