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  • 1
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    Springer Nature | Springer
    Publication Date: 2024-04-05
    Description: This open access book offers the first comprehensive account of the pan-genome concept and its manifold implications. The realization that the genetic repertoire of a biological species always encompasses more than the genome of each individual is one of the earliest examples of big data in biology that opened biology to the unbounded. The study of genetic variation observed within a species challenges existing views and has profound consequences for our understanding of the fundamental mechanisms underpinning bacterial biology and evolution. The underlying rationale extends well beyond the initial prokaryotic focus to all kingdoms of life and evolves into similar concepts for metagenomes, phenomes and epigenomes. The book’s respective chapters address a range of topics, from the serendipitous emergence of the pan-genome concept and its impacts on the fields of microbiology, vaccinology and antimicrobial resistance, to the study of microbial communities, bioinformatic applications and mathematical models that tie in with complex systems and economic theory. Given its scope, the book will appeal to a broad readership interested in population dynamics, evolutionary biology and genomics.
    Keywords: Microbial Genetics and Genomics ; Evolutionary Biology ; Genetics and Population Dynamics ; Microbial Ecology ; Human Genetics ; Genetics and Genomics ; Comparative genomics ; Metagenomics ; Microbial Population Analysis ; Pangenome Profile ; Supra-Genome Analysis ; Adaptive Evolution ; Computational Tools ; Bioinformatic Genomics ; Core Dispensable Genome ; Selection, Recombination, Composition ; Acquired Resistance ; Bacterial Species Concept ; Genomic Diversity ; Bacterial Ecology, Microevolution ; Open Access ; Pan-metagenomics ; Pan-microbiomics ; Pan-epigenome ; Gene Transfer ; Pan-phenomes ; Microbiology (non-medical) ; Genetics (non-medical) ; Evolution ; Applied mathematics ; Ecological science, the Biosphere ; Medical genetics ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSG Microbiology (non-medical) ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSA Life sciences: general issues::PSAJ Evolution ; thema EDItEUR::P Mathematics and Science::PB Mathematics::PBW Applied mathematics ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSA Life sciences: general issues::PSAF Ecological science, the Biosphere ; thema EDItEUR::M Medicine and Nursing::MF Pre-clinical medicine: basic sciences::MFN Medical genetics ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSA Life sciences: general issues::PSAK Genetics (non-medical)
    Language: English
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  • 2
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Braconidae ; Lepidoptera ; Pieridae ; cabbage ; tritrophic interactions ; semiochemicals ; host-habitat location ; foraging behaviour
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Upon initiating a research project on the role of volatile infochemicals in the tritrophic system Cotesia (= Apanteles) glomerata (L.)-Pieris brassicae (L.)-cabbage, a bioassay was developed to investigate the response of C. glomerata. The bioassay should be effective in terms of high responsiveness and minimum variability and constructed through a comparative approach. Twenty seven treatments, organized in a factorial randomized block design, compared the effect of three bioassay set-ups (glasshouse flight chamber, wind-tunnel and Y-tube olfactometer), three parasitoid age groups (1–2, 4–5 and 8–9 days old females), three pre-treatment experiences (naive, damage experienced and oviposition experienced wasps) and the day-to-day effect on response of C. glomerata to clean cabbage (CC) and planthost complex (PHC) in a dual choice test. The best results with regard to the strength and consistency of response to the PHC were obtained in the glasshouse flight-chamber by 4–5 days old female wasps with either damage or oviposition experience (94 and 90%, respectively). It is therefore recommended as a suitable bioassay for studying the role of volatile infochemicals in host-habitat location by C. glomerata. A day-to-day variation in response was found in the glasshouse and wind-tunnel. It was correlated with the direction of change in barometric pressure within the time period of the experiment, showing that steadily increasing atmospheric pressure yields a significantly higher response than steadily decreasing or fluctuating barometric flux. To control for the day effect it is suggested to conduct further experiments in a block design, having day as a block. Several aspects of the infochemical ecology of C. glomerata are discussed.
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  • 3
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    Entomologia experimentalis et applicata 73 (1994), S. 289-297 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; parasitoid ; C. rubecula ; foraging behaviour ; specialist ; synomones ; infochemical use ; tritrophic interactions ; olfaction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The role of volatile stimuli in the long-range host-searching behaviour of the specialist parasitoidCotesia rubecula Marshall (Hymenoptera: Braconidae) was studied. Components from the plant-host-complex Brussels sprouts (Brassica oleracea L. var.gemmifera (DC.) Schulz. cv. ‘Titurel’)-Pieris rapae L. (Lepidoptera: Pieridae) were compared for their attractiveness in dual choice tests in a windtunnel. Stimuli from cabbage plants that were mechanically damaged or damaged byP. rapae caterpillars were more attractive to this parasitoid species than stimuli emitted by the host larvae or their faeces. Parasitoids preferred leaves from the plant-host-complex over artificially damaged leaves. Undamaged cabbage plants were the least attractive to the foraging females. These results indicate that in-flight searching behaviour ofC. rubecula is guided by plant-derived information and that for this specialist species more reliable and specific host-derived cues play a minor role at longer distances.
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  • 4
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    Acta biotheoretica 33 (1984), S. 35-50 
    ISSN: 1572-8358
    Keywords: Evolution ; falsification ; Darwinism ; philosophy of science
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In this paper we discuss the epistemological positions of evolution theories. A sharp distinction is made between the theory that species evolved from common ancestors along specified lines of descent (here called “the theory of common descent”), and the theories intended as causal explanations of evolution (e.g. Lamarck's and Darwin's theory). The theory of common descent permits a large number of predictions of new results that would be improbable without evolution. For instance, (a) phylogenetic trees have been validated now; (b) the observed order in fossils of new species discovered since Darwin's time could be predicted from the theory of common descent; (c) owing to the theory of common descent, the degrees of similarity and difference in newly discovered properties of more or less related species could be predicted. Such observations can be regarded as attempts to falsify the theory of common descent. We conclude that the theory of common descent is an easily-falsifiable & often-tested & still-not-falsified theory, which is the strongest predicate a theory in an empirical science can obtain. Theories intended as causal explanations of evolution can be falsified essentially, and Lamarck's theory has been falsified actually. Several elements of Darwin's theory have been modified or falsified: new versions of a theory of evolution by natural selection are now the leading scientific theories on evolution. We have argued that the theory of common descent and Darwinism are ordinary, falsifiable scientific theories.
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  • 5
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    Entomologia experimentalis et applicata 69 (1993), S. 33-39 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Aphidiinae ; aphid ; sex pheromone ; parasitoid ; Praon volucre ; Aphidius rhopalosiphi
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Laboratory and field experiments provided evidence for the release of sex pheromones by virgin femalePraon volucre Haliday andAphidius rhopalosiphi De Stefani-Perez (Hymenoptera: Braconidae, Aphidiinae). In Petri dish biosassays, rubber or vermiculite models treated with crude virgin female extracts were frequently approached by males and elicited rapid wing-fanning behaviour and copulation attempts. Delta-shaped water traps containing live virgin females caught large numbers of conspecific males when placed in winter wheat crops. Trapping slightly below crop height resulted in higher catches than trapping above the crop canopy.
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  • 6
    ISSN: 1570-7458
    Keywords: Cruciferae ; Brassica oleracea ; tritrophic interactions ; Pieridae ; Hymenoptera ; parasitoids ; Cotesia ; kairomones ; headspace ; GC-MS ; chemical composition
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Headspace composition, collected from intact cabbage plants and cabbage plants infested with eitherPieris brassicae L. orP. rapae L. (Lepidoptera: Pieridae) first instar larvae, was determined by GC-MS. Twenty-one volatiles were identified in the headspace of intact plants. Twenty-two volatiles were identified in the headspace of plants infested byP. brassicae larvae, 2 of which, Z-3-hexenyl butyrate and Z-3-hexenyl isovalerate, were not detected in the headspace of either intact orP. rapae damaged plants. In the headspace of the latter, 21 compounds were identified, all of which which were also produced by intact plants. No significant quantitative differences were found between headspace composition of the plants damaged by one or the other caterpillar species. Major differences between intact and caterpillar-damaged plants in contribution to the headspace profile were revealed for hexyl acetate, Z-3-hexenyl acetate, myrcene, sabinene and 1,8-cineole. The larval endoparasitoidCotesia glomerata L. was attracted by the volatiles emanating fromB. oleracea damaged byP. brassicae first instar larvae.C. rubecula L., a specialized larval endoparasitoids ofP. rapae, was attracted by the volatiles released from theB. oleracea-P. rapae plant-host complex. This shows that cabbage plants kept under the conditions of headspace collection produce attractive volatiles for both parasitoids.
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  • 7
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    Entomologia experimentalis et applicata 73 (1994), S. 211-220 
    ISSN: 1570-7458
    Keywords: Eurytoma amygdali ; Hymenoptera ; Eurytomidae ; host selection ; chemical stimuli ; olfactory response ; aggregation ; oviposition ; almond
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Females of the almond seed wasp,Eurytoma amygdali Enderlein (Hymenoptera, Eurytomidae), responded in an olfactometer positively to odours from almond flowers and unripe fruits, but not to almond leaf odours and odours from flowers and unripe fruits of certain other nonhostPrunus species. Males responded to none of these odours. Extracts of undamaged unripe almond fruits (using ethanol, methanol, acetone, hexane, dichloromethane, or petroleum ether) stimulated female aggregation on glass surfaces treated with these extracts; in addition, certain fruit extracts (ethanol, methanol, or acetone) stimulated oviposition. Extracts of undamaged almond leaves (ethanol, methanol, or acetone) and flowers (ethanol or methanol) also stimulated female aggregation and oviposition. Aggregation and oviposition in response to an ethanol extract of almond fruits was intense in females aged 5 to 14 days and from 12∶00 to 18∶00h (photophase between 06∶00 and 20∶00). Certain almond fruit (ethanol, methanol, acetone or hexane) and flower extracts (ethanol or methanol) also provoked female response in the olfactometer. The results strongly suggest that certain chemical stimuli emanating from parts of the almond tree play a major role in host selection and oviposition. Some of the extracts tested may be a good source for the isolation, identification and synthesis of compounds stimulating attraction, aggregation and oviposition in nature. *** DIRECT SUPPORT *** A3414024 00003
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  • 8
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    Entomologia experimentalis et applicata 68 (1993), S. 1-7 
    ISSN: 1570-7458
    Keywords: Hybridoma ; detectability period ; venom ; predation ; serology ; protease ; Vespidae ; Hymenoptera
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In order to derive quantitative estimates of predation rate from serological gut analysis data, one must have an estimate of the interval during which a meal can be detected after feeding. In practice this has turned out to be ‘Dmax,’ defined as ‘...the time from finishing a meal until that meal could just no longer be detected in any individuals.’ However Dmax substitutes an absolute limit for what is really a continuous variable with significant variation. We examined this problem in a study of the detectability ofHelicoverpa zea Boddie (Lepidoptera: Noctuidae) fifth instar remains in the guts ofPolistes metricus Say (Hymenoptera: Vespidae). Wasps were maintained onTrichoplusia ni (Hübner) (Lepidoptera: Noctuidae) fifth instars before being fed a singleH. zea fifth instar. They were killed and frozen at 0, 24, 48 and 96 h intervals, with those held for more than 24 h fed a singleT. ni fifth instar at 24 h intervals in order to simulate continued feeding. Wasp abdomens were assayed by immunodot, using a monoclonal antibody toH. zea arylphorin. There was a logarithmic decay in the proportion ofP. metricus positive over time, a singleH. zea fifth instar meal having a detectability half-life of 19.4 h at field temperatures. If prey antigen detectability decays exponentially, then a detectability half-life is a more appropriate unit of detectability than an absolute detectability period.
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  • 9
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    Entomologia experimentalis et applicata 68 (1993), S. 219-229 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Aphidiidae ; Homoptera ; Aphididae ; Schizaphis graminum ; wheat ; tritrophic interactions ; learning ; host-habitat location
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effect of experience on the responsiveness of the aphidiid parasitoidLysiphlebus testaceipes (Cresson) (Hymenoptera: Aphidiidae) to host-associated cues was investigated using a wind-tunnel bioassay. Naive females were able to discriminate between uninfested wheat (Triticum aestivum L.) and wheat infested withSchizaphis gramimum (Rondani) (Homoptera: Aphididae), but oviposition experience significantly increased the parasitoid's propensity to respond to aphid-infested plants with upwind, targeted flight. The behavioural change associated with such experience was acquired rapidly (within five minutes) and persisted for at least 24 h. The parasitoid could be successfully conditioned to associate a novel odour with the presence of hosts, suggesting that the increase in response to aphid-infested plants which occurs as a result of experience is probably due to associative learning of olfactory cues from the plant-aphid complex.
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  • 10
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    Entomologia experimentalis et applicata 67 (1993), S. 183-192 
    ISSN: 1570-7458
    Keywords: symbionts ; thelytoky ; arrhenotoky ; Hymenoptera
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Microbe-associated parthenogenesis (thelytoky) has been discovered in nineTrichogramma species, parasitoids of mainly lepidopteran eggs. Parthenogenetic and bisexual conspecifics co-occur in many field populations. As an initial step to understand the dynamics of these two reproductive strategies we studied the effect of microbe-associated parthenogenesis on fecundity. The fecundity of two parthenogenetic isofemale lines ofT. pretiosum and one ofT. deion was compared with bisexual lines derived from them by antibiotic treatment. In all three cases parthenogenetic females were less fecund over their lifetime than bisexual females. Also, parthenogenetic females produced fewer daughters in two cases and in one case a similar number of daughters as their respective bisexual counterparts. The lack of mating and insemination was excluded as an explanation for the reduced fecundity of parthenogenetic females, because mated and virgin parthenogenetic females produce the same number of offspring. Antibiotic treatment can also be excluded because females of field-collected bisexual line treated with antibiotics produced the same number of offspring as untreated females. The reduced fecundity of parthenogenetic females was caused by a lower number of eggs being laid rather than by a greater developmental mortality. Parthenogenetic females produced less daughters than bisexual females when host availability was not limiting, but when host availability was severely limited, parthenogenetic females produced more daughters than the bisexual females.
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  • 11
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    Entomologia experimentalis et applicata 67 (1993), S. 233-239 
    ISSN: 1570-7458
    Keywords: inbreeding ; colonization ; isofemale line ; Drosophila ; Diptera ; Leptopilina boulardi ; Cynipidae ; Hymenoptera
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé D. melanogaster (Meigen) a été utilisé pour tester la capacité des lignées isofemelles à conserver la variabilité génétique d'une population naturelle. Deux types d'expériences ont été réalisées. L'une a consisté à déterminer la variabilité génétique de 3 locus enzymatiques pour 32 lignées isofemelles à la première et à la 23ème génération d'élevage au laboratoire. L'autre a consisté à tester la capacité des larves à éliminer un parasitoïde par le processus d'encapsulation après 8 années d'élevage au laboratoire. D'une façon générale, certaines lignées isofemelles perdent de la variabilité durant les 23 générations de l'étude. Mais la fréquence globale des allèles reste inchangée si l'on considère l'ensemble des 32 lignées. Le seul allèle rare observé a également été conservé. Les modifications des fréquences allèliques à chacun des locus ont lieu de façon indépendante les unes des autres. La variabilité génétique d'un caractère biologique, la capacité des larves à encapsuler le parasitoïde, a également varié, mais elle a pu être restaurée à un niveau proche de la population initiale en rassemblant plusieurs individus de chacune des lignées.
    Notes: Abstract Drosophila melanogaster (Meigen) was used to test the power of isofemale lines in preserving genetic variability. We performed experiments in two ways. One series consisted of measuring the genetic variability for three enzymatic loci in 32 isofemale lines, in the first and 23rd generations of culture. In the second series, we tested the capacity of the larvae to eliminate a parasitoid by encapsulation after eight years of laboratory breeding. In general, individual isofemale lines appeared to change during the 23 generations of the study, but the global frequency of these alleles among the 32 isofemale lines stayed relatively unchanged. The only rare allele observed was also conserved. Changes in allozyme frequencies at any one locus were independent of those at other loci. Genetic variation of a biological trait, the capacity of the larvae to encapsulate a parasitoid, also changed, but it could be restored to a level close to that of the starting population by mass hybridizing together individuals of each line.
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  • 12
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Braconidae ; Cotesia marginiventris ; parasitoid ; host searching ; allelochemicals ; plant synomones ; leaf damage ; frass ; flight tunnel
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé L'hyménoptèreC. marginiventris Cresson, parasite solitaire, est connu comme étant attiré par les odeurs liées à l'hôte émises par un complexe de chenilles consommant des feuilles. La source exacte de ces substances attractives restait encore à déterminer. Pour cela, des expériences en tunnel de vol ont été réalisées dans lesquelles différents composés du complexe plante et hôte ont été testés individuellement et en combinaisons diverses. Les 3 composés testés ont été: 1) des plantules de maïs endommagées par des chenilles deSpodoptera exigua (BAW); 2) des excréments produits par les chenilles de BAW consommant du maïs; 3) des chenilles de BAW en l'absence de plantes et d'excréments. Les plantes endommagées ont été significativement plus attractives que les excréments ou les chenilles. En expériences de choix, les excréments étaient plus attractifs que les chenilles. Différentes combinaisons de ces 3 composantes principales ont montré que l'attractivité augmentait quand les chenilles étaient associées à des feuilles endommagées. Ajouter des excréments n'augmentait pas significativement l'attractivité. Quand des chenilles étaient associées avec des feuilles endommagées, mais en présence d'écran les empêchant de consommer les feuilles, l'attractivité était celle des feuilles endommagées seules. Des feuilles de maïs n'ayant jamais été exposées aux dégâts des chenilles étaient à peine attractives. On peut en conclure que les feuilles endommagées par les chenilles sont la principale source de substances volatiles qui orientent le parasitoïdeC. marginiventris vers le voisinage de ses hôtes. La consommation active par les chenilles augmente probablement la quantité de substances émises par les plantes, ce qui se traduit par une attractivité accrue. Les substances volatiles des plantes jouent un rôle dans la découverte de l'habitat de l'hôte par les parasitoïdes. De plus en plus d'éléments suggèrent qu'une interaction sophistiquée entre hôte, plante et parasitoïde sera éventuellement révélée.
    Notes: Abstract Single and dual choice tests in a flight tunnel revealed that plants damaged by host larvae are the main source of the volatiles that attract females of the parasitoidCotesia marginiventris (Cresson) to the microhabitat of its hosts. Frass and host larvae, the other two major components of a complete plant-host complex, were significantly less attractive than the damaged seedlings; frass alone was more attractive than larvae alone. However, a recombination of larvae with the damaged seedlings was significantly more attractive than the damaged leaves alone, or damaged leaves with frass. This was due to the additional feeding damage done by the larvae. The role of plants in the host-finding behaviour of parasitoids is discussed.
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  • 13
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    Entomologia experimentalis et applicata 58 (1991), S. 165-174 
    ISSN: 1570-7458
    Keywords: Eurytoma amygdali ; Hymenoptera ; Eurytomidae ; host marking pheromone ; host discrimination ; oviposition behaviour
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé Des expériences de laboratoire et des observations concernant le comportement de ponte de Eurytoma amygdali Enderlein (Hymenoptera, Eurytomidae) ont montré que, immédiatement après la ponte, les femelles déposent une phéromone de marquage de l'hôte en trainant le bout de leur abdomen sur la surface de l'amande. Cette phéromone les rends capable de distinguer les fruits infectés des non-infectés dt de sélectionner pour la ponte les derniers. Apparemment, la fonction principale de cette phéromone est la prévention de la répétition des ovipositions dans les fruits déjà infectés et la répartition uniforme des oeufs dans les amandes, contribuant ainsi à la meilleure utilisation des ressources disponsibles pour le développement des larves. Des expériences de deux choix entre des fruits de différents traitements ont montré que la phéromone pouvait être perçue par les femelles par le direct contact et, quand elle était à hautes concentrations, par olfaction d'une courte distance. La phéromone était présente dans l'abdomen et dans le thorax des femelles, et bien qu'elle soit soluble à l'eau, elle ne pouvait pas s'éloigner entièrement par lavage des amandes sérieusement infectées à l'eau. Les observations ont démontré qu'après un numéro de 3.7 visites successives sur des amandes portant de la phéromone les femelles s'éloignaient du lieu de ponte en marchant ou, le plus souvant, en s'envolant, ce qui suggère que la phéromone contribue à la dispersion des femelles.
    Notes: Abstract Laboratory experiments and observations on the oviposition behaviour of the almond seed wasp Eurytoma amygdali Enderlein (Hymenoptera, Eurytomidae) revealed that the females of this species deposit a host-marking pheromone, immediately after an oviposition, by dragging the tip of their abdomen on the fruit surface. This pheromone enables them to discriminate between the infested and uninfested fruit and to select for oviposition the latter. Its primary function is apparently the prevention of repeated ovipositions in already infested fruit, thus contributing to the optimal utilisation of the available resources for larval development. The responses of individual females to different treatments of almonds, in a series of two-choice tests, revealed that the pheromone can be perceived by the females on direct contact and, when at high concentrations, also olfactorily from a short distance. The pheromone was present inside the abdomen and thorax of females but not of males, and, although water soluble, could not be entirely removed from heavily infested almonds when rinsed with water. Direct observations revealed that after an average of 3.7 successive visits to pheromone-bearing almonds, females were induced to walk or, most often, fly away from the experimental set-up. This suggests that the pheromone may also contribute to the dispersion of the wasps.
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  • 14
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    Entomologia experimentalis et applicata 58 (1991), S. 267-277 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Ichneumonidae ; Campoletis sonorensis ; parasitoid ; host microhabitat ; synomones ; wind tunnel ; experience
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The host microhabitat location behavior of females of the generalist parasitoid Campoletis sonorensis (Cameron) (Hymenoptera: Ichneumonidae) was studied in a wind tunnel. Visual cues associated with the host plant cotton, Gossypium hirsutum L., were important and significantly more parasitoids completed flights to a damaged 4-leaf cotton plant bearing a Heliothis virescens (F.) (Lepidoptera: Noctuidae) larva and frass than to a similarly damaged single leaf with frass and a larva. This difference in completed flights was not due to differences in amounts of volatiles released by the two stimuli. Both naive and experienced parasitoids responded differently to an undamaged cotton leaf, a mechanially damaged leaf, a naturally damaged leaf with the host removed and a naturally damaged leaf with a host larva. Parasitoids completed significantly fewer flights to the undamaged sources of volatiles than to damaged sources of volatiles. Experienced females responded strongly to all types of damage. The number of flights completed by naive females to the three types of damage differed but not significantly and was less than the number completed by experienced females. Components of the preflight experience were varied to determine which factors were responsible for the higher response of experienced females to the host/plant complex. Oviposition was the most important component of this experience. Contact with host frass or plant damage followed by oviposition did not increase the response over that exhibited by females allowed oviposition only. When frass or damaged plant material were contacted without subsequent oviposition, females completed fewer flights than naive females.
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  • 15
    ISSN: 1570-7458
    Keywords: Eurytoma amygdali ; Hymenoptera ; almond pest ; sex pheromone ; population monitoring ; chemical control
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract During the four years 1986–1989 we monitored an adult male population of the almond seed wasp, Eurytoma amygdali Enderlein, in the region of Thessaloniki, using sex pheromone traps, each containing 25 living virgin females. The emergence of adults from infested almonds of the previous year was also monitored in cages in the field, as well as the progress of fruit infestation and egg hatching in the almonds of the Retsou variety. Finally, two chemical control experiments were done against the newly hatched larvae to determine the optimal time for chemical control. During the 4-year study the start of adult captures occurred between April 13 and April 24, and the maximum between April 17 and May 11. In most cases, adult emergence from infested almonds in field cages began with a delay of 2 to 14 days in relation to the start of trap captures, and was affected by factors such as the date of cage installation. In all years most eggs hatched within 12–18 days of oviposition. A treatment with phosphamidon at a concentration of 0.06%, applied to tree branches of the Retsou variety with a hand-sprayer on May 23, 1987, when 54.1% of the eggs had hatched, was very effective (final infestation in July was 4.7% as compared to 89.1% of the untreated control). Three treatments with phosphamidon 0.06%, applied each on different tree branches, on May 14, 20, and 25, 1988, when the percentage of egg hatching was 7.8%, 65.3%, and 93.5%, respectively, were all very effective (final infestation in July was 1.6%, 3.6%, and 4.2% respectively, as compared to 93.6% of the untreated control). However, the presence of mines in the perisperm and outer endosperm, caused by the feeding larvae before they were killed, was more conspicuous in the almonds treated when the percentage of egg hatching was high. Our data suggest that the almond seed wasp can be effectively controlled with a single treatment of a systemic insecticide against the newly hatched larvae, preferably applied when the percentage of egg hatching is low to medium (between 10% and 50%). In the area of Thessaloniki, during 1986–89, 10% and 50% of egg hatching occurred about 21 and 27 days respectively after the beginning of male adult captures in pheromone traps.
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  • 16
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Diprionidae ; chiral compounds ; behavioural activity ; attractant ; inhibitor
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract All eight optical isomers of 3,7-dimethyl-2-pentadecanyl acetate (diprionyl acetate), of high optical purity (〉 97.4%), were tested for a behavioural activity on male pine sawflies, Neodiprion sertifer (Geoffr.) (Hymenoptera: Diprionidae), in northern Europe. Males were strongly attracted to (2S,3S,7S)-diprionyl acetate. Addition of more than 0.1% of the (2S,3R,7R)-isomer reduced the catch and above 2% the attraction was completely inhibited. Contrary to what has been reported for North American and Japanese populations, so significant synergistic effect of small amounts of the (2S,3R,7R)-isomer could be demonstrated. The effects of addition of the other six optical isomers alone or in combinations, were also studied, but none was found to be a synergist. The (2S,3R,7S)-isomer had a weak inhibitory effect, and completely inhibited the attraction to the (2S,3S,7S)-isomer when applied in about equal amounts as the attractant. In some cases a reduction in catch was noted when other isomers were tested, but this could be attributed to the very small amounts of the inhibitory (2S,3R,7R)-isomer present in these isomers.
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    Entomologia experimentalis et applicata 66 (1993), S. 171-177 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; egg parasites ; parasitoid quality ; mass rearing ; biological control ; factitious host
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    Topics: Biology
    Notes: Abstract The relationship between the index of female's size, hind tibia length (HTL), and selected fitness parameters used in quality assessment of mass-rearedTrichogramma spp. (Hymenoptera, Trichogrammatidae) was investigated. The studied fitness parameters were: the number of mature eggs present in the ovaries of females 0–2 hours, as well as 1, 2 and 3 days old, lifetime fecundity, fecundity during a 24 h period, longevity in the presence and absence of the factitious host (Ephestia kuehniella Zeller) and locomotor activity. The relationship between HTL and fitness parameters was analysed in 7 strains ofTrichogramma spp. (Trichogramma dendrolimi Matsumura,T. evanecens Westwood,T. maidis Pinturea et Voegelé andT. ostriniae Pang et Chen) using linear correlation. No significant relationship was found between HTL and egg complement, fecundity, longevity and locomotor activity. The results indicate that HTL used as an index of female's size is not suitable for quality assessment ofTrichogramma reared onE. kuehnieIla.
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  • 18
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    Entomologia experimentalis et applicata 70 (1994), S. 27-39 
    ISSN: 1570-7458
    Keywords: almond seed wasp ; Eurytoma amygdali ; diapause termination ; insect dormancy ; temperature ; prolonged diapause ; photoperiod ; Hymenoptera
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    Topics: Biology
    Notes: Abstract Diapausing larvae ofEurytoma amygdali Enderlein (Hymenoptera, Eurytomidae) were collected in early August and late September. They were subjected to various photoperiod and temperature regimens for up to 20 weeks, then kept at L16:D8 and 19°C for another 14 to 26 weeks for diapause to be terminated and pupation to take place. Photoperiod did not affect diapause completion. It was confirmed that the two morphologically distinct diapause stages have different temperature requirements for their completion. The first diapause stage was completed synchronously at temperatures between 16 and 19°C. A higher temperature of 26°C delayed diapause development. The second stage required lower temperatures between 4 and 10°C. Spontaneous termination of dipause was observed at constant 19°C. When applied to the first diapause stage for 20 weeks, low temperatures made the larvae refractory to subsequent intermediate temperatures. The first stage was thus maintained until a higher temperature of 26°C made the larvae regain their ability to respond to the intermediate temperatures and complete this stage. Larvae grown in Retsou almonds had a higher diapause intensity than larvae grown in Truoito almonds. The results suggest that, in nature, the high temperatures of late summer and early autumn are likely to maintain the first diapause stage. Subsequently, the less warm temperatures of autumn allow the completion of the first stage by late autumn, and the low temperatures of late autumn and of winter allow the completion of the second diapause stage by mid winter.
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  • 19
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    Entomologia experimentalis et applicata 70 (1994), S. 83-90 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Symphyta ; Tenthredinidae ; Dineura virididorsata ; sawfly ; sex ratio ; oviposition behaviour ; mating behaviour
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    Topics: Biology
    Notes: Abstract Sex ratios of the arrhenotokous sawflyDineura virididorsata Retz. (Hymenoptera: Tenthredinidae) are variable among populations in the field, but are biased in favour of females. We have concluded elsewhere that the sex ratios of this species cannot be satisfactorily explained by any general sex ratio model that is available. Here we present data on the different behavioural traits that are relevant to interpretation of the evolution of female-biased sex ratios under local mate competition. We report on oviposition behaviour, mating behaviour and the patterns of movement of ovipositing virgin and mated females. Our results show that adult emergence is synchronous and females will mate daily with different males (in the laboratory, at least). This would decrease the relatedness of offspring should it also take place in the field. In addition, ovipositing females (mated and virgin) leave their site of release in a relatively short time and deposit few eggs relative to their capabilities, so siblings are unlikely to be clumped. The time that virgins spend in deposition of an egg is not different from that spent by mated females, so there is no differential ‘investment’ in this regard. These behavioural observations agree with our previous conclusion that the preconditions of current sex ratio theories are not met byD. virididorsata.
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  • 20
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    Entomologia experimentalis et applicata 70 (1994), S. 121-128 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Trichogrammatidae ; Trichogramma fuentesi ; couleur de l'hôte ; mutation récessive ; distribution ; influence de la température
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    Topics: Biology
    Description / Table of Contents: Abstract In Cuba, during its larval development inside its host egg,Trichogramma fuentesi turns its host egg either black or brown. Crossings carried out between the two forms ofT. fuentesi allowed to show that this character is determined by one locus with two alleles: Bh, dominant, colours the host black; and bh, recessive, colours the host brown. The bh allele is more frequent in the eastern region of Cuba which is also the warmest, than in the western region. We studied the evolution of frequencies of the two alleles in different experimental polymorphic populations at 23 °C and at 30 °C. In all tested conditions, bh was at a disadvantage by comparison with Bh, except at 30 °C when its initial frequency was high (90%). Thus, temperature alone should certainly not explain the maintenance of the observed polymorphism in Cuba.
    Notes: Résumé A Cuba, les oeufs hôtes parasités parTrichogramma fuentesi Torre (Hymenoptera: Trichogrammatidae) deviennent soit noirs, soit marrons. Une série de croisements entre Trichogrammes a permis de montrer que le déterminisme de ce caractère est sous la dépendance d'un locus portant deux allèles: Bh, dominant, confère une couleur noire à l'hôte; bh, récessif, confère une couleur marron. L'allèle bh étant plus fréquent dans la région orientale de Cuba, la plus chaude, nous avons suivi l'évolution des fréquences des deux allèles dans des populations expérimentales polymorphes placées à 23 °C et 30 °C. Dans toutes les conditions testées, bh a été désavantagé par rapport à Bh, sauf à 30 °C lorsque sa fréquence initiale était élevée (90%). La température n'explique donc certainement pas à elle seule le maintien du polymorphisme à Cuba.
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  • 21
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    Entomologia experimentalis et applicata 64 (1992), S. 117-124 
    ISSN: 1570-7458
    Keywords: Learning ; specialist ; generalist ; parasitoid ; Leptopilina ; foraging behaviour ; Hymenoptera
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    Topics: Biology
    Notes: Abstract Effects of learning in two microhabitat specialists, Leptopilina boulardia Barbotin et al. and L. fimbriata Kieffer were compared to previous and new results of learning in the microhabitat generalist L. heterotoma Thomson. Females were given one or more oviposition experiences on hosts in different types of substrate. In all species oviposition experience affected the choice for a substrate, although this effect of learning was considerably less in L. fimbriata compared to the other two species. Patch times, known to be highly determined by experience in the generalist L. heterotoma, were much less flexible in the specialists. L. boulardi and L. fimbriata have fixed patch times on their natural substrate and have variable patch times on other substrates only. In all three species one oviposition affected the choice for a substrate. Additional ovipositions showed no different effect. An accumulative effect of the number of ovipositions on patch times was found in L. heterotoma only. Retention of the learning effect was only studied in L. boulardi, and was shown to be similar to that reported for L. heterotoma, i.e. two to three days. Although learning was found in both the generalist and the specialist species studied, it seems to affect their foraging behaviour differently.
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  • 22
    ISSN: 1572-8889
    Keywords: Seed chalcid ; Bruchophagus spp. ; Hymenoptera ; Eurytomidae ; Chalcidae ; olfactory behavior ; polarization vision ; insect behavior
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    Topics: Biology
    Notes: Abstract When the alfalfa [Bruchophagus roddi (Gussakovsky)], clover [Bruchophagus gibbus (Boheman)], and trefoil seed chaldds (TSC) [Bruchophagus platypterus (Walker)] were exposed to yellow, white, green, and purple painted polyethylene vials perforated by four small holes, only the latter species had a color preference, and that was for yellow, the color of its host flower. When TSC were exposed to green and yellow targets 5 h after sunrise, they preferred yellow targets but not 1 h after sunrise. The possibility of a circadian response was eliminated because different sequences of light-dark regimes prior to the test did not change the results. When TSC were exposed only to yellow targets, half of which had trefoil flowers hidden within, females preferred targets with flowers. When an identical test was conducted but with green instead of yellow targets, the preference for targets with flowers disappeared. In a four-choice test, TSC preferred yellow targets with or without flowers to green targets with or without flowers. Thus, TSC displayed an olfactory response only when the color yellow was present. In unfiltered skylight females preferred baited targets when the test began 3 h before or 1 h after solar noon but not 4 h before or 2 h after solar noon. Chalcids did display an olfactory preference 4 h before solar noon when a Polaroid filter was used to filter skylight and provide an east-west but not a north-south E-vector. When Helmholtz coils were used to apply a magnetic field that canceled or changed the direction of the earth's magnetic field, olfactory preference disappeared because the applied magnetic field changed TSC perception of the E-vector. In effect, TSC must perceive yellow in the presence of an east-west E-vector to display an olfactory preference to a choice of odors. We believe this is the first report that the E-vector of celestial light can influence olfactory and visual behavior of an insect.
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  • 23
    ISSN: 1572-8889
    Keywords: Hymenoptera ; Leptopilina ; Drosophila ; semiochemicals ; kairomones ; parasitoid ; generalist ; specialist ; foraging behavior
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    Notes: Abstract Foraging parasitoids are thought to need more specific information than generalists on the presence, identity, availability, and suitability of their insect host species. In the present paper, we compare responses to host kairomones by two phylogenetically related parasitoid species that attack Drosophilidae and that differ in the width of their host range. As predicted, the behavioral response of the parasitoids to host kairomones reflected their difference in host range. The response of the specialist parasitoid Leptopilina boulardiwas restricted to contact kairomones from its natural hosts and one closely related species. In contrast, the generalist parasitoid Leptopilina heterotomaresponded to contact kairomones of a variety of Drosophilidae species.
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    Journal of insect behavior 6 (1993), S. 737-750 
    ISSN: 1572-8889
    Keywords: sex pheromone ; vibrational communication ; courtship sequence ; Hymenoptera ; Braconidae ; Cotesia rubecula
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    Notes: Abstract The courtship behavior of the parasitic wasp Cotesia rubeculawas studied in a flight tunnel using standard quantitative ethological techniques. Emission of a female sex pheromone induces searching and signaling behavior in males. Males combine wing-fanning, which produces low-frequency airborne sound, with “pulsing” behavior, which transmits a vibrational signal through the substrate to the female and induces her receptivity. Female receptivity is indicated by a stereotyped antennal position, which may provide a visual or tactile signal to courting males. Comparison of successful and unsuccessful courtships indicated that courtship success was dependent primarily on the effective production or reception of the male pulse signal. Overall, the sequence of courtship behavior was similar to that reported for other parasitic wasps.
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  • 25
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    Journal of insect behavior 3 (1990), S. 277-287 
    ISSN: 1572-8889
    Keywords: parasitoid behavior ; heritable traits ; Microplitis croceipes ; Hymenoptera ; Braconidae ; allelochemical ; flight response ; host location
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    Notes: Abstract The heritable nature of differential responses by Microplitis croceipes(Cresson) (Hymenoptera: Braconidae) to airborne allelochemicals was investigated. Four isofemale lines were tested for three generations in a flight tunnel. Flight response was found to be strongly dependent on the familial origin, with two highly responsive lines being clearly differentiated from two less responsive ones. Each isofemale line could also be recognized by typical behaviors that suggested that M. croceipesfemales may inherit independent characters of sensory acuity to plant and to host chemicals and of learning ability.
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  • 26
    ISSN: 1572-8889
    Keywords: postemergence learning ; cross-induction ; foraging behavior ; Cotesia congregata (Say) ; Braconidae ; Hymenoptera
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    Notes: Abstract Postemergence experience with one of six plant species, in the presence of the host larva, modified the searching response of reproductively mature females of Cotesia congregata(Say) to these plants in at least one of three ways: (1) an increased response to the plant experienced at emergence, (2) an increased response to other plants, or (3) an inhibited response to other plants. Landing and searching responses were differentially affected by postemergence experience. For example, postemergence experience with tobacco (a common plant) in the presence of the host larva induced a landing preference for this plant over parsley (a novel plant) but did not affect searching responses to either plant, whereas experience with parsley and the host larva induced an increased searching response to parsley but a landing preference for tobacco. Differential effects of postemergence experience may reflect the type of stimuli involved in searching or landing and may have adaptive significance.
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  • 27
    ISSN: 1572-8889
    Keywords: parasitoid ; foraging behavior ; Hymenoptera ; Cotesia ; Lepidoptera ; Pieris ; host location ; solitary ; gregarious ; specialist ; generalist
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    Notes: Abstract In the present study we apply a comparative approach, in combination with experimentation, to study behavior of two parasitoid species that attack caterpillar hosts with different feeding strategies (gregarious or solitary). In a semifield setup, consisting of clean cabbage plants and plants infested with one of two host species, the foraging behavior of the specialistCotesia rubecula, on obligate parasitoid of solitarily feedingPieris rapae larvae, was compared to that of the generalistCotesia glomerata, a polyphagous parasitoid of several Pieridae species (mainly the gregariously feedingPieris brassicae).Cotesia glomerata displayed equal propensity to search for and parasitize larvae of both host species. AlthoughC. glomerata exhibited a relatively plastic foraging behavior in that it searched differently under different host distribution conditions, its behavior seems more adapted to search for gregariously feeding hosts. Females exhibited a clear “area-restricted” search pattern and were more successful in finding the gregariously feeding caterpillars.Cotesia rubecula showed a higher propensity to search forP. rapae than forP. brassicae, i.e., females left the foraging setup significantly earlier when their natural hostP. rapae was not present.C. rubecula showed a more fixed foraging behavior, which seems adapted to foraging for solitarily feeding host larvae. In a setup with onlyP. rapae larvae, the foraging strategies of the two parasitoid species were quite similar. In a choice situationC. glomerata did not show a preference for one of the host species, whileCotesia rubecula showed a clear preference for its natural host species. The latter was shown by several behavioral parameters such as the number of first landings, allocation of search time, and percentage parasitization.
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    Journal of insect behavior 3 (1990), S. 85-104 
    ISSN: 1572-8889
    Keywords: Hymenoptera ; Vespidae ; Belonogaster petiolata ; rubbing behavior ; sternal gland ; ant predation ; defensive allomone
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    Notes: Abstract Females of the social wasp, Belonogaster petiolata,rub the secretion of van der Vecht's gland, located on their terminal gastral sternite, onto the nest pedicel. In bioassays, the secretion was repellent to two species of ants, while shortchain acids were effective releasers of rubbing behavior. Rubbing was associated with pedicel enlargement and departure from the nest in preemergence colonies. Its frequency was high where wasps were often exposed to ants and low where ants were rare or absent. Rubbing also decreased significantly from the pre-to the postemergence stage of the colony cycle. In both stages, subordinate foundresses rubbed more often than queens or workers. These observations support the hypothesis that rubbing behavior and the secretion of van der Vecht's gland function in chemical defense of the nest against ant predation. The general morphology of the gland in B. petiolataresembles that of the four other independent-founding polistine wasp genera.
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  • 29
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    Journal of insect behavior 3 (1990), S. 241-250 
    ISSN: 1572-8889
    Keywords: antipredator behavior ; prey caching ; Ammophila ; Formica ; foraging behavior ; Hymenoptera
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    Topics: Biology
    Notes: Abstract Many solitary ground-nesting wasps in the families Pompilidae and Sphecidae excavate nests after capturing prey for provisions. These wasps generally cache their immobilized prey temporarily during nest excavation, frequently by suspending the prey in a plant (”aerial caching”). Here I test the hypothesis that aerial caching by Ammophila spp. wasps (Sphecidae) functions to reduce prey theft by generalist predators, Formica spp. ants. Foraging ants removed baits placed on the ground more rapidly than baits suspended in plants; mean half-lives for ground and aerial baits were 14.5 and 145.7 min, respectively (mean values for experiments 1–3). Ant foraging activity decreased during the midday. Ant interference with nesting activities of Ammophila spp. also decreased during the midday, paralleling observed fluctuations in ant foraging activity.
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  • 30
    ISSN: 1572-8889
    Keywords: host selection ; experience ; learning ; extinction ; reinforcement ; parasitoids ; Drosophila ; Leptopilina heterotoma ; Hymenoptera ; Eucoilidae
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    Topics: Biology
    Notes: Abstract The host-foraging behavior of female entomophagous parasitoids is commonly modified by positive associative learning. Typically, a rewarding experience (e.g., successful oviposition in a host) increases a female's foraging effort in a host microhabitat of the type associated with that experience. Less well understood are the effects of unrewarding experiences (i.e., unsuccessful foraging). The influence of unrewarding experience on microhabitat choice and residence time within a microhabitat was examined for the eucoilid parasitoid,Leptopilina heterotoma, in laboratory and greenhouse assays. As determined previously, females which oviposited successfully in either of two microhabitat types (fermenting apple or decaying mushroom) strongly preferred to forage subsequently on that microhabitat type. However, failure to find hosts in the formerly rewarding microhabitat caused females to reverse their preference in favor of a novel microhabitat type. The effect, though striking, was transient: within 1–2 h, the original learned preference was nearly fully restored. Similar effects of unrewarding experiences were observed with respect to the length of time spent foraging in a microhabitat. As determined previously, oviposition experience in a particular microhabitat type increased the time spent foraging in a patch of that microhabitat type. However, failure to find hosts in the patch caused the time a wasp spent in the next unoccupied patch of that type to decrease to almost nothing. In addition, there was a tendency for an unrewarding experience on a formerly rewarding microhabitat type to extend the time spent in a patch of a novel type. The function of the observed effects of unrewarding experiences is discussed.
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    Journal of insect behavior 3 (1990), S. 359-379 
    ISSN: 1572-8889
    Keywords: ant ; aggression ; kin discrimination ; Rhytidoponera confusa ; Hymenoptera ; Formicidae
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    Topics: Biology
    Notes: Abstract Significant variation in aggressiveness and kin discrimination ability occurs between different laboratory colonies of the ant Rhytidoponera confusa.Different colonies show consistently high (or low) levels of aggression toward nonnestmates over 4–19 weeks. Earlier studies excluded colony size and the natural presence or absence of the queen in colonies and differences in hunger as possible sources of variation. The present study excluded the number of larvae in colonies and the time of the light period of the light cycle when recognition tests were carried out. Highly significant variation occurs between the kin discrimination ability of individual workers in any particular colony. Approximately 28% of the workers in colonies of R. confusashowed very poor kin discrimination. Much of the colony's kin discrimination is carried out by a small number of highly aggressive workers.
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    Journal of insect behavior 4 (1991), S. 743-750 
    ISSN: 1572-8889
    Keywords: Leptopilina boulardi ; Hymenoptera ; Eucoilidae ; parasitoid ; olfaction ; learning ; olfactometer
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    Topics: Biology
    Notes: Abstract We studied odor learning in Leptopilina boulardi,a specialist larval parasitoid of Drosophila melanogaster.The behavioral responses of differently experienced females to an artificial odor (Must de Cartier, Paris) were analyzed using a fourarmed airflow olfactometer. The responses of females with an oviposition experience in the presence of the perfume were compared with those of four control groups. As controls we used naive females, females with an oviposition experience in the absence of odor, females which had been previously exposed to perfume but without an oviposition experience, and females with an oviposition experience which also had been exposed to perfume but not at the same time. The results demonstrate that a specialist such as L. boulardican learn very well to respond to an artificial odor by associating this odor with a reward, i.e., an oviposition. The four control groups responded more or less in a similar way.
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  • 33
    ISSN: 1572-8889
    Keywords: Hymenoptera ; Braconidae ; Dacnusa sibirica ; Diptera ; Agromyzidae ; Liriomyza bryoniae ; foraging behavior ; volatile infochemicals ; wind tunnel ; anemotaxis ; learning
    Source: Springer Online Journal Archives 1860-2000
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    Notes: Abstract Previous investigations suggested that the leafminer parasitoid Dacnusa sibirica Telenga does not use a volatile hostrelated infochemical in foraging for hosts. Parasitoids landed with equal frequencies on an uninfested tomato plant and on a tomato plant infested with larvae of the leafminer Liriomyza bryoniae (Kalt.) (Hendrikse et al., 1980). In contrast, we found that volatile infochemicals emitted by uninfested and leafminer-infested tomato plants differently affected the parasitoid 's foraging behavior in a windtunnel. This was obvious from the proportion of wasps flying upwind but not from the proportion of wasps landing on the leaves. Latency time on an uninfested tomato leaflet and proportion of latency time devoted to preflight antennal behavior were influenced by the presence of upwind infested or uninfested tomato leaves. However, these parameters were not affected by odors in the absence of visual plant stimuli. Our data provide a new view on foraging behavior of Dacnusa sibirica.
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  • 34
    ISSN: 1572-8889
    Keywords: Phoridae ; Diptera ; Formicidae ; Hymenoptera ; host ; parasitoid ; behavior ; Atta ; Neodohrniphora
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    Topics: Biology
    Notes: Abstract This study examines the oviposition behavior of the phorid parasitoid Neodohrniphora curvinervisand the antiparasitoid defense behavior of its leafcutting ant host Atta cephalotes. N. curvinervisfemales are diurnal sit- and- wait parasitoids that attack only outbound foragers of head width 1.6 mm or greater. Females deposit a single egg through the foramen magnum of each host successfully parasitized. Pursuit of hosts is usually initiated when an outbound forager of acceptable size passes by a parasitoid perch site. Individual foragers defend themselves against pursuing parasitoids by outrunning them along the foraging trail or by standing their ground and fending them off with their legs,antennae, and mandibles. At the colony level, susceptible foragers are protected against parasitism by a shift in the forager size distribution toward smaller unsusceptible sizes during the day when parasitoids are active and toward larger sizes at night when parasitoids are inactive. The frequency of parasitism of susceptible foragers was 15%, which is more than five times the frequency found in another system involving the phorid parasitoid Apocephalus attophilusand the leafcutting ant host Atta colombica.We offer several possible explanations for such differences in the frequency of parasitism and also examine reasons for the high incidence of superparasitism (19%) observed in the system studied.
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  • 35
    ISSN: 1572-8889
    Keywords: Hymenoptera ; Vespidae ; Vespula spp. ; foraging behavior ; chemoorientation ; social facilitation ; local enhancement ; spatial dispersion
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    Topics: Biology
    Notes: Abstract A series of experiments on the discovery of meat bait by scavenging workers ofV. germanica andV. maculifrons showed that workers oriented to meats by visual cues and olfactory cues. Scavening workers ofV. germanica andV. maculifrons responded positively to the sight of conspecifics at meat baits; i.e., meat with (confined) wasps received more visits than meat without wasps. This attraction to conspecific workers on meat baits provides evidence of local enhancement, in that the presence of conspecifics at meat bait directs other wasps to a particular spatial locality. Local enhancement by yellowjackets foraging for meat may contribute to the clumped distribution of worker populations noted in studies of workers captured in meat-baited traps. We hypothesize that local enhancement of foraging is a ubiquitous behavior in species of theV. vulgaris species group and may be one attribute explaining their ecological success.
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    Journal of insect behavior 4 (1991), S. 727-742 
    ISSN: 1572-8889
    Keywords: postemergence learning ; early-adult experience ; Cotesia congregata (Say) ; Braconidae ; Hymenoptera
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Exposing newly emerged females of Cotesia congregata(Say) to wild cherry, an inherently unattractive plant, and their host larvae at 0–4 h after adult emergence induced a positive searching response to wild cherry and an inhibited response to cabbage, an attractive plant. Inherent responses were not affected when females were exposed to their hosts at 0–12 h and to cherry at 8–12 h after emergence. The induced response to cherry was constant until its disappearance at 6–7 days;inhibition of the response to cabbage was released at 4–5 days after emergence. Postemergence exposure to cherry and parasitoid cocoons induced similar but weaker searching responses. Induced searching responses exhibit features of associative learning and receptor modification. In addition to its presumed role in foraging, postemergence experience with plants may encourage assortative mating of C. congregatawithin suitable host habitats and, thus, facilitate local adaptations to specific plants.
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  • 37
    ISSN: 1572-8889
    Keywords: Hymenoptera ; Braconidae ; Opius dissitus ; Diptera ; Agromyzidae ; Liriomyza sativae ; semiochemical ; volatile ; foraging behavior ; adult experience ; learning
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Oviposition-experienced females of Opius dissitus Muesebeck, a braconid parasitoid of Liriomyza sativaeBlanchard, preferentially landed on leafminer-infested rather than uninfested lima bean (Phaseolus lunatus L.) plants in a flight tunnel assay. Both naive and oviposition-experiencedparasitoids responded strongly to odors of infested lima bean plants in a four-arm olfactometer in comparison with odors of uninfested plants, suggesting that volatile semiochemicals are used in host location. Parasitoids with an oviposition experience on lima bean (“lima-experienced”) spent significantly more time in the infested odor than naive individuals, however, eggplant-experienced wasps did not spend significantly more time in the infested odor field than naive wasps. When parasitoids reared on leafminers in lima bean were provided a choice between the odor of infested lima bean and the odor of infested eggplant or cotton, naive and lima-experienced wasps preferred infested lima odor. An oviposition experience on the other plant species resulted in a dramatic shift in preference. It was concluded that the experience effect was due, at least in part, to associative learning, as has been reported for other parasitoids. The parasitoids may perceive unconditioned stimuli during host contact and oviposition on an infested leaf and may associate those stimuli with volatile semiochemicals emanating from the leaf or host. Subsequently, the volatiles associated with the presence of hosts are used in directing the search for hosts.
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  • 38
    ISSN: 1572-8889
    Keywords: Hymenoptera ; Braconidae ; Microplitis croceipes ; cotton ; cowpea ; parasitoid ; host location ; kairomones ; olfaction ; induced plant responses ; learning
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A study was conducted to determine the primary source of volatile cues within the plant-host complex used by hostseeking freeflying female Microplitis cro-ceipesCresson in flight tunnel bioassays. In single-source and two-choice tests, using wasps given an oviposition experience on either cotton (Gossypium hirsutum)or cowpea (Vigna unguiculata)seedlings damaged by corn earworm (CEW; Helicoverpa zeaBoddie), the damaged seedlings were significantly more attractive than the CEW frass, which was in turn more attractive than the larvae themselves. In a series of two-choice wind-tunnel tests, the discriminatory ability of the wasps was examined, following various oviposition experiences. Significantly more wasps flew to plants with “old” damage than to plants with “fresh” damage, regardless of whether they had experience on fresh or old damage. In a comparison of plant species, wasps with only one experience on either hostdamaged cotton or host-damaged cowpea were unable to distinguish between them, and showed no preference for either plant, whereas wasps with multiple experiences on a particular plant preferentially flew to that plant in the choice test. In comparing hosts with nonhosts, wasps successfully learned to distinguish CEW from beet armyworm (BAW; Spodoptera exigua)on cotton but were unable to distinguish CEW from either BAW or cabbage looper (Trichoplusia ni)on cowpea. The results show the important role played by plant volatiles in the location of hosts by M. croceipesand indicate the wasps’ limitations in discriminating among the various odors. The ecological advantages and disadvantages of this behavior are discussed.
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  • 39
    ISSN: 1572-8889
    Keywords: brood ; pheromone ; slavemaking ants ; Polyergus breviceps ; Formica occulta ; Hymenoptera ; Formicidae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Freeliving workers of Formica occulta, an ant species enslaved by the obligatory slavemaking ant Polyergus breviceps, retrieve and nurse Polyergus pupaejust as well as conspecific pupae in a choice test. No such attraction was found toward pupae of the facultative slavemaker; Formica wheeleri,which also enslaves F. occulta. Formica neogagates,a sympatric species which is not parasitized by either slavemaker, preferentially retrieves and tends conspecific brood over that of Polyergusand F. wheeleri.It is proposed that brood of obligatory slavemaking species must possess an attractive pheromone for slavemaker colony foundation to be successful, since slavemaker brood must be nursed by adult slave workers with no prior exposure to slavemaker brood. An attractive pheromone is not necessary in the brood of facultative slavemakers, since this brood is cared for by newly eclosed slave workers who imprint on the slavemaker brood.
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  • 40
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    Entomologia experimentalis et applicata 54 (1990), S. 173-180 
    ISSN: 1570-7458
    Keywords: Encapsulation ; evolutionary relationships ; host suitability ; parasitization ; parasitoid complexes ; Diadegma armillata ; Hymenoptera ; Ichneumonidae ; Lepidoptera ; Yponomeutidae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé L'étude a porté sur la valeur de 8 représentants européens du genre Yponomeuta (Lep., Yponomeutidae) comme hôtes pour Diadegma armillata (Hym., Ichneumonidae). La présence, l'état du parasitoïde, le nombre de chenilles contenant un hyménoptère et la mortalité des chenilles on été examinés par dissection et par élevage des chenilles attaquées en conditions contrôlées. Pour examiner si la mortalité des chenilles saines et parasitées diffèrent, des chenilles non contaminées par l'ichneumonide ont été utilisées comme témoins. De plus, des chenilles provenant de différentes parties des Pays-Bas et d'Allemagne ont été disséquées pour connaître leur taux de parasitisme par D. armillata. La valeur des diverses espèces diffère considérablement. Les dissections montrent que cela provient de différentes aptitudes à l'encapsulation des œufs du parasite. La comparaison des taux observés par la dissection des chenilles des différentes parties des Pays-Bas et d'Allemagne montre une surprenante uniformité pour les populations d'origines géographiques différentes. Les observations sur l'encapsulation par les différentes espèces d'yponomeutes correspondent assez bien aux différences observées parmi les divers complexes parasitaires dans lesquels D. armillata intervient. Certains éléments montrent cependant que le taux d'attaques victorieuses (sans tenir compte d'une éventuelle encapsulation ultérieure) contribue aussi aux différences observées entre les complexes parasitaires. Le classement des espèces d'yponomeutes en 3 catégories, d'après leur valeur comme hôte, montre un remarquable parallélisme avec les relations phylogéniques mises en évidence par analyse des allozymes: les espèces présentant une forte proportion d'encapsulation sont celles qui ont divergé précocement au cours de l'évolution du genre, tandis que les espèces ayant divergé le plus récemment présentent un pourcentage intermédiaire ou sont incapables d'encapsuler les œufs de D. armillata.
    Notes: Abstract The suitability as a host of Diadegma armillata (Gravenhorst) (Hymenoptera, Ichneumonidae) was determined for eight West-European representatives of the genus Yponomeuta Latreille (Lepidoptera, Yponomeutidae) by dissecting and rearing parasitized larvae under controlled conditions. The suitability of the various species differed considerably, and dissection showed that this was mainly due to the ability of the host species to encapsulate the parasitoid eggs. Encapsulation by Yponomeuta-species corresponded fairly well to the differences between the parasitoid complexes concerning D. armillata. Classifying the Yponomeuta-species into three categories according to their suitability, showed a remarkable parallelism with the phylogenetic relationships as determined by allozyme comparison: species showing high encapsulation rates are those that have diverged early in the evolution of the genus, whereas the more recently evolved species showed an intermediate percentage or were not able to encapsulate eggs of D. armillata.
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  • 41
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    Entomologia experimentalis et applicata 63 (1992), S. 229-236 
    ISSN: 1570-7458
    Keywords: Azinphosmethyl ; time response tests ; resistance ; Trioxys pallidus ; biological control ; genetic improvement ; Hymenoptera ; Aphidiidae ; gene amplification
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Homogeneity in azinphosmethyl resistance was assessed in males of a laboratory-selected (Select-17) and susceptible (Yolo) colony of Trioxys pallidus Haliday (Hymenoptera: Aphidiidae) using a time response assay. No evidence of heterogeneity within the two colonies was found. Reciprocal crosses between the Yolo and the Select-19 (the Select-17 colony following two additional selections) colonies resulted in F1 females that exhibited a semidominant response to azinphosmethyl with a dominance value (D) of 0.32, as well as no evidence of maternal effects or sex linkage. Responses of F2 progeny to azinphosmethyl suggest that more than one gene may be involved because no inflection was observed in the time response lines of F2 males. Additional research is required to fully elucidate the mode of inheritance.
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  • 42
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    Entomologia experimentalis et applicata 55 (1990), S. 47-57 
    ISSN: 1570-7458
    Keywords: Campoletis sonorensis ; parasitoid ; Hymenoptera ; Ichneumonidae ; Heliothis virescens ; cotton ; potential host community location ; host location
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé Les comportements d'évaluation de l'effectif d'hôtes potentiels et de la position des hôtes par C. sonorensis (Hyméno.: Iccheumonidae) ont été quantifiés pour déterminer les séquences significatives des événements comportementaux. La localisation de la colonie potentielle d'hôtes est apparue comme une séquence régulière des événements comportementaux. Une fois que le parasitoïde a localisé une colonie potentielle, on a constaté que la recherche au hasard des hôtes se poursuit jusqu'à ce qu'il ait la démonstration qu'il s'agit d'une plante attaquée. La localisation par le parasitoïde d'un hôte certain a consitué une autre séquence régulière des événements comportementaux terminant la localisation de l'hôte. L'influence de pieds de coton intacts, de pieds abîmés mécaniquement et de pieds occupés par des chenilles du 3ème stade de l'hôte et de plantes dont les chenilles ont été retirées juste avant l'expérience a été déterminée en modifiant la composition du complexe hôte/plante. Des femelles naïves de C. sonorensis ont montré en présence de pieds de coton intacts apparemment toutes les séquences comportementales de vol impliquées dans la localisation d'une colonie potentielle d'hôtes. Une fois que le parasitoïde a atteint la colonie potentielle d'hôtes, la présence de dégâts de l'hôte n'a pas modifié le temps passé sur la plante, mais a modifié le temps consacré à la prospection.
    Notes: Abstract Wind tunnel flight behavior of inexperienced female Campoletis sonorensis (Cameron) (Hymenoptera; Ichneumonidae) in response to its larval host Heliothis virescens (F.) (Lepidoptera: Noctuidae) feeding on the host plant cotton (Gossypium hirsutum L.) is described. The flight behavioral sequence was determined by quantification of frequencies of observed behaviors and probabilities of first-order behavioral transitions. Comparison of inexperienced C. sonorensis flights to undamaged and damaged cotton indicated that stimuli from undamaged plants alone are adequate to elicit the complete flight behavioral sequence observed in response to H. virescens feeding on cotton. Parasitoid foraging behavior was also analyzed after landing on the stimulus. This behavior appeared to be random in its initial stages, but became sequential after location of evidence of a host. Analysis of foraging on undamaged and 3 treatments of damaged cotton resulted in the determination that parasitoids tend to remain on damaged plants longer than undamaged plants although no significant difference was detected. C. sonorensis spent a greater percentage of their time foraging on host damaged plants than on undamaged plants.
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    Monatshefte für Chemie 125 (1994), S. 1033-1039 
    ISSN: 1434-4475
    Keywords: Prebiotic peptide formation ; Evolution ; Clay catalysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Zusammenfassung Die Fähigkeit von Tonmineralien der Montmorillonitklasse zur Katalyse von Peptidbildungsreaktionen aus Aminosäuren in wäßriger Lösung wurde am Beispiel von Glyzin und Kupfer sowie Kalzium und Morillonit untersucht. Experimente mit Verdampfungszyklen haben gezeigt, daß kleinere Mengen von Di- und Tripeptiden aus der Aminosäure gebildet werden. Die weitere Polymerisation von Dipeptiden hingegen scheint wesentlich leichter in diesem Reaktionssystem zu verlaufen als der Anfangsschritt der Bildung des Dipeptides. Eine mögliche Rolle von Tonmineralien in der präbiotischen Peptidevolution kann daher in der Verlängerung von Peptidketten gesehen werden. Kupferionen in der Tonmatrix zeigen keinerlei Vorteile gegenüber den üblichen Kalziumionen, die in natürlichem Montmorillonit vorkommen.
    Notes: Summary The ability of montmorillonite clay minerals for catalyzing peptide formation from amino acids in aqueous solution has been investigated using glycine and Cu2+ and Ca2+ containing montmorillonites as reaction systems. Evaporation cycle experiments showed that minor amounts of di- and tripeptide are formed from the amino acid. Further polymerization of dipeptide, however, seems to be more favoured by this reaction system than the initial step of dipeptide formation, and a possible role of clays in prebiotic peptide evolution could be seen therefore in the prolongation of peptide chains. Cu2+ ions in the clay matrix did not show any advantage over the usual Ca2+ ions embedded in natural montmorillonite.
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    ISSN: 1420-9071
    Keywords: Ropalidia marginata ; primitively eusocial wasp ; queen success ; worker-brood genetic relatedness ; inclusive fitness theory ; Hymenoptera
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract Ropalidia marginata is a primitively eusocial polistine wasp in which, although there is only one queen at any given time, frequent queen replacements lead to a system of serial polygyny. One of the most striking features of this system, is the enormous variation in the success of different queens. Measuring queen success as queen tenure, total number of offspring produced, number of offspring produced per day of tenure, and proportion of eggs laid that develop into adults, we show here that each measure of queen success is correlated with worker-brood genetic relatedness and not correlated with worker: brood ratio or the age of the queen at takeover. We interpret these results as meaning that queens are better able to obtain the cooperation of workers when worker-brood genetic relatedness is high.
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    Cellular and molecular life sciences 48 (1992), S. 414-416 
    ISSN: 1420-9071
    Keywords: Solitary bees ; lipid polymer ; silk ; CP/MAS13CNMR ; Hymenoptera ; Colletidae ; Hylaeus bisinuatus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract The nest cell lining ofHylaeus bisinuatus (Hymenoptera: Colletidae) was shown by high-resolution solidstate [13C]NMR to be composed of lipid polymer and protein. The lipid polymer was shown by reduction and subsequent GC/MS analysis to be comprised of ω-hydroxy fatty acids (C20, C22, C24 and C26) and fatty alcohols (C16 to C30). The protein portion of the lining had a silk-like amino acid composition.
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  • 46
    ISSN: 1570-7458
    Keywords: Diapause termination ; postdiapause development ; development threshold ; thermal constant ; Aphelinus mali ; Hymenoptera ; Aphelinidae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé L'achèvement de la diapause en conditions naturelles ou simulant l'hiver, les effets des températures inférieures à zéro sur le développement après la diapause et les relations entre la vitesse de développement après la diapause et les températures constantes ou en thermopériodes ont été examinés sur des populations néerlandaises d'A. mali (Hymenop.; Aphélinidae). Les taux d'achèvement de la diapause de larves hivernantes étaient semblables en conditions naturelles ou simulées. La plupart des larves ont terminé leur diapause la dernière semaine de février. Quelques larves femelles sont restées en diapause jusqu'à fin mars. L'exposition pendant 2 semaines des larves sorties de diapause à −10 °C ne compromet pas leur survie ou leur taux de développement après la diapause. Les larves ayant diapause peuvent terminer leur développement et les adultes émerger des pucerons momifiés aux températures constantes comprises entre 12 et 24 °C. Bien que quelques larves achèvent leur développement à 10 °C, peu émergent. La température seuil théorique de développement après la diapause (to) a été de 9,4 °C et la constante thermique (K), 136,5 degrés-jours. Pour la première émergence et pour 50% d'émergences, les valeurs de K étaient respectivement: 121,4 et 134,8. Le nombre d'unités thermiques pour la première émergence et pour 50% d'émergences était le même à température constante ou avec une thermopériode.
    Notes: Abstract Diapause termination under natural and simulated overwintering conditions, the effect of subzero temperature on postdiapause development and the relationship between postdiapause development rate and constant and fluctuating temperatures was studied in a Dutch population ofAphelinus mali Hald. (Hymenoptera: Aphelinidae). The rate of diapause termination was similar in larvae overwintering under natural and simulated conditions. Most larvae had terminated diapause by the last week of February. Some female larvae may have remained in diapause until the end of March. The exposure of postdiapause larvae to −10°C for two weeks did not affect their survival or postdiapause development rate. PostdiapauseA. mali larvae could complete development and the adults emerge from their mummified aphid hosts at constant temperatures from 12 to 24°C. Although some larvae completed postdiapause development at 10°C, few emerged. The theoretical threshold temperature (to) for postdiapause development was 9.4°C and the thermal constant (K) 136.4 degree-days. K was 121.4 and 134.8 for first and 50% emergence, respectively. The number of heat units accumulating above 9.4°C to 1st and 50% emergence was similar under constant and fluctuating temperatures.
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  • 47
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    Entomologia experimentalis et applicata 34 (1983), S. 27-34 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Aphidiidae ; Aphidius rhopalosiphi ; Sitobion avenae ; Functional response
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé Nous avons examiné quelques aspects des relations entre le parasitoïde Aphidius rhopalosiphi et son hôte Sitobion avenae. La fécondité potentielle à l'émergence (144 œufs) était inférieure à la fécondité “réalisée”: nombre de pucerons momifiés (212). La plupart des œufs étaient pondus dans la première semaine de la vie imaginale (fig. 1). Le super-parasi-tisme s'est produit dans les conditions expérimentales, mais la distribution des larves (fig. 2) s'écartait souvent de la distribution au hasard, ce qui indiquait une certaine discrimination parmi les hôtes. La longévité moyenne était de 13,1 jours et le maximum de 23 jours. Le taux sexuel (fig. 3) pour l'ensemble de la descendance était 1/1, mais changeait dans le temps. Après le premier jour de ponte, plus de femelles que de mâles étaient obtenues; mais après 6 jours, il n'y avait presque plus que des mâles. Le taux de rencontre des aphides et des parasitoïdes augmentait avec la taille (fig. 4a). Le temps de prospection de l'hôte était en moyenne de 2 secondes, mais dans certains cas il atteignait 10 secondes ou plus. La proportion de rencontres efficaces était plus faible au 4ème stade (fig. 4b). Il n'y avait pas de différence significative dans le nombre de larves de parasitoïdes obtenues par rencontre pendant les stades 1 à 3 des pucerons, mais elle était significativement inférieure au 4ème stade par rapport au second. Les taux globaux de succès (taux de rencontre et nombre de larves formées par rencontre) étaient plus élevés aux 2ème stades des pucerons. La réponse fonctionnelle était sigmoïde (fig. 5).
    Notes: Summary Aphidius rhopalosiphi produced 212 offspring on average but in one case 509 deposited eggs were found. Superparasitization occurred but the frequency distribution of parasitoid larvae in aphids differed significantly from random, indicating a certain degree of host discrimination. Average life span of adults was 13.1 days and sex ratio was 1:1. It changed in time among successively produced offspring. Handling time was about 2 sec and was somewhat longer in the fourth instar than in the second. Second and third aphid instars were preferred for oviposition. Functional response was sigmoid and at an aphid density of 100 aphids per cage percentage parasitization decreased.
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    Entomologia experimentalis et applicata 34 (1983), S. 78-84 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Braconidae ; Microplitis croceipes ; Heliothis ; Parasitoid ; Host suitability ; Host selection ; 3-trophic level interactions
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Zusammenfassung Microplitis croceipes (Cresson), Parasit der Heliothis-Larven, wurde in 9 Kombinationen von Wirtsinsekt/Wirtspflanze gezüchtet. Im allgemeinen war das Ueberleben der Parasiten (1) besser in Wirtsraupen von Baumwolle als von Bohnen oder Tomaten, (2) besser in H. zea als in H. virescens und (3) besser in laborgezüchteten H. zea als in Raupen aus dem Freiland. Mehrere Versuche über die Eiablagepräferenz der Parasiten zeigten, dass mehr Eier in Raupen von Baumwolle als in Raupen von Bohnen oder gar von Tomaten abgelegt wurden. Die Wespen unterschieden aber nicht zwischen H. zea und H. virescens. Die Eiablagepräferenzen waren unabhängig von den Kombinationen Wirtsinsekt/Wirtspflanze, in denen sich die Parasiten entwickelt hatten. Die Ergebnisse weisen darauf hin, dass die Pflanze, auf der die Wirtsraupe frisst, wichtig ist für die Wahrscheinlichkeit eines Parasitenangriffs und für den Erfolg der Parasitierung.
    Notes: Summary Microplitis croceipes (Cresson), a parasitoid of Heliothis larvae, was reared on 9 host insect/plant combinations. In general, parasitoid survivorship was (1) higher in host larvae that were reared on cotton than in hosts reared on either bean or tomato, (2) higher in H. zea hosts than in H. virescens and (3) higher in a laboratory strain of H. zea than in a wild strain. A series of parasitoid oviposition preference tests showed that wasps laid more eggs in host larvae on cotton plants than on bean and more on bean than on tomato. However, the wasps did not distinquish between H. zea and H. virescens hosts. Wasp oviposition preferences were not conditioned by the host insect/plant combination in which the parasitoid developed. These results indicate that the plant on which host larvae feed is an important factor in determining both the likelihood of parasitoid attack and the probability of successful parasitism.
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    Entomologia experimentalis et applicata 34 (1983), S. 155-162 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Braconidae ; Lepidoptera ; Nymphalidae ; Apanteles bignellii ; Euphydryas aurinia ; Multivoltinism ; Synchronisation ; Weather
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Zusammenfassung In einer Population von Euphydryas aurinia (Rottemburg) bei Oxford, England treten während einer Generation von E. aurinia drei Normalgenerationen von Apanteles bignellii Marshall auf. Jede Generation des Parasitoids kann charakterisiert werden durch das befallende Wirtsstadium und durch die aus einem Wirt schlüpfende Zahl Parasitoide. Parasitoide schlüpfen in Normalgenerationen aus dem 3., dem 4. und dem 6. Stadium des Wirts; in Ausnahmegenerationen schlüpfen sie aus dem 2. und 5. Stadium. Bis zu 70 Parasitoide können aus einer Altraupe (6. Stadium) schlüpfen und die Dauer dieses Stadiums kann bis auf 2 Wochen verlängert werden. Die Ausnahmegenerationen von A. bignellii aus Zweitlarven dürften aus Eiablagen in frühe Erstlarven stammen. Fünftlarven des Wirts, aus denen Parasitoide schlüpfen, sind ungewöhnlich klein und fressen nicht; sie dürften das Resultat sein eines Uebermasses von Apenteles-Eiern, die in frühe Viertlarven gelegt wurden. Die Synchronisation zwischen dem Parasitoiden und dem Wirt während der Zeit, da E. aurinia im Puppen-, Adult- oder Eistadium ist, wird aufrechterhalten durch ein verlängertes Coconstadium von Apanteles. Die Puppen des Parasitoiden entwickeln sich normal und die Adulten schlüpfen, bleiben aber bis 4 Wochen lang im Cocon, bevor sie sich eine Ausgangsöffnung machen. Das Wetter kann den Parasitierungsgrad der letzten Wirtsstadien beeinflussen. Wenn der Frühling kalt ist mit klarem Himmel, kann die Synchronisierung zwischen Parasitoiden, die aus Viertlarven des Wirts schlüpfen und potentiellen Fünft- und Sechtstlarven des Wirts schlecht werden. Die Entwicklung von Apanteles-Puppen wird durch die Umgebungstemperatur beeinflusst, während E. aurinia-Larven ihre Temperatur erhöhen, indem sie sich sonnen und deshalb rasch wachsen. Wenn die Parasitoiden unter solchen Bedingungen schlüpfen, sind die meisten potentiellen Wirte schon verpuppt und damit nicht mehr geeignet für die Parasitierung. Die Mechanismen der Synchronisation und der Wettereinfluss auf diese Vorgänge wird diskutiert.
    Notes: Abstract The gregarious endoparasite, Apanteles bignellii Marshall is specific to the nymphalid butterfly, Euphydryas aurinia (Rottemburg) in the British Isles. The synchronisation between host and parasitoid is described at a site near Oxford, England where both occur. Three regular generations of A. bignellii occur in one generation of the host in the studied population. Relevant features of the biology of A. bignellii and E. aurinia are described, including a method of distinguishing the number of Apanteles larval instars based upon shed cuticle remnants. Mechanisms for host-parasitoid synchronisation are outlined, especially a protracted parasitoid cocoon stage when the host is unavailable for attack during the chrysalis, adult and egg stages. Cool, but sunny weather conditions in spring can influence the degree of parasitisation experienced by final instar host caterpillars. The timing of adult A. bignellii emergence and subsequent attack on early instar hosts can lead to additional, partial, generations of parasitoids from second and fifth instar hosts.
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    Entomologia experimentalis et applicata 34 (1983), S. 208-211 
    ISSN: 1570-7458
    Keywords: Dieretiella rapae ; Encyrtidae ; Insecticide ; Integrated control ; Hymenoptera ; Pteromalidae ; searching behavior ; Syrphidae
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    Entomologia experimentalis et applicata 35 (1984), S. 205-207 
    ISSN: 1570-7458
    Keywords: Hymenoptera ; Formicidae ; ants ; gland volumes ; lumen ; attine and myrmicine glands ; hydrocarbon reservoir
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    Entomologia experimentalis et applicata 36 (1984), S. 31-35 
    ISSN: 1570-7458
    Keywords: Colpoclypeus florus ; Hymenoptera ; Eulophidae ; integrated pest management ; mass rearing ; biological control ; Adoxophyes orana ; Archips podana ; Archips rosana ; Clepsis spectrana ; Hedya nubiferana ; Pandemis heparana ; Ptycholoma lecheana ; Spilonota ocellana
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé Colpoclypeus florus Walk., ectoparasite grégaire de Tortricidae, est capable de provoquer un taux de parasitisme élevé dans plusieurs types de cultures, y compris dans les vergers de pommiers. Dans les vergers aux Pay-Bas, ce parasite n'abonde qu'en été sur la première génération d'Adoxophyes orana. Les autres tortricides échappent à ses attaques, parce qu'elles ne peuvent être attaquées qu'au printemps. Le but de ces études était donc la mise au point d'une technique d'élevage de masse de C. florus, pour relâcher ce parasite en grand nombre dans les vergers au printemps. La technique décrite a permis de produire plusieurs milliers de parasites par semaine. Des lâchers de 16 000–28 000 parasites par ha dans un verger soumis à un programme de lutte intégrée, bien que faisant des victimes parmi toutes les espèces importantes de tortricides présentes, étaient loin d'occasionner le taux de parasitisme escompté. Le nombre de degrés-jours nécessaire au développement des différents stades de C. florus a été déterminé au laboratoire, et son cycle évolutif, inconnu aux Pays-Bas, puisque le parasite ne se trouve qu'en été, a été calculé et comparé aux observations faites en élevages en plein air. C. florus a de 4 à 5 générations par an, et la comparaison de sa phénologie avec celle des différentes tordeuses explique son absence hors de l'été. Au laboratoire, Archips podana était plus parasité, et Pandemis heparana moins parasité qu'A. orana. Le nombre moyen de descendants produits par femelle de C. florus et par chenille-hôte variait selon les hôtes, dépendant probablement de la taille des chenilles. Bien qu'A. orana n'ait pas produit le plus grand nombre de parasites par chenille, elle a été néanmoins préférée aux autres tortricides comme hôte pour les élevages.
    Notes: Abstract Colpoclypeus florus Walk. is a gregarious ectoparasite of tortricids. Details of biology and annual cycle in orchards in the Netherland are reported. It has four to five generations per year, but only females of the second generation, and some of the third, meet with abundant hosts (Adoxophyes orana F.v.R.) of the proper size. Therefore, the parasite is scarce to virtually absent from Duth orchards except in July and August. A technique for mass-rearing of C. florus is described, producing 6 000 wasps per week. 16 000–28 000 wasps/ha were released in spring, in order to control leafrollers. Although all important leafroller species were parasitized, the rate of parasitization was too low to be effective.
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    Journal for general philosophy of science 21 (1990), S. 309-328 
    ISSN: 1572-8587
    Keywords: Evolution ; evolutionäre Erkenntnistheorie ; Organismus ; Autonomie ; Abbildungskritik
    Source: Springer Online Journal Archives 1860-2000
    Topics: Philosophy , Nature of Science, Research, Systems of Higher Education, Museum Science
    Notes: Summary The concept of evolutionary epistemology has been critically discussed by philosophers who have mainly pointed to unacceptable philosophical tenets (cf. Vittorio Hösle, this Journal, Vol. 19 (1988), pp. 348–377). However, as most philosophers are extremely reluctant to critically treat the biological theories on which the ideas of evolutionary epistemology are based, the invalid concepts of adaption escaped their critical scrutiny. Therefore the influence of preconceived biological theories on the biological basis of evolutionary epistemology and the distorting consequences on the philosophical level could not be elaborated. The following context sketches a new view of organismic reasoning and its impact on evolutionary aspects of epistemology. The basic theorem of adaptation is shown to be unacceptable and invalid if organisms are conceived as autonomous entities which can only evolve according to their specific internal organismic properties.
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    Entomologia experimentalis et applicata 35 (1984), S. 43-47 
    ISSN: 1570-7458
    Keywords: Opius concolor ; Hymenoptera ; Braconidae ; sex ratio ; host size ; female age
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé L'influence de la taille de l'hôteret de l'âge de la femelle sur le taux sexuel de la descendance a été étudiée sur le parasitoïde Opius concolor Szépl. Le taux sexuel de la descendance des femelles isolées est favorable aux femelles (t.s.=0,26) quand elles ont à leur disposition des hôtes de grande taille, tandis qu'avec des hôtes petits le taux sexuel est favorable aux mâles (t.s.=0.73). On n'a pas détecté de mortalité différentielle des sexes. Les pourcentage de mâles obtenu le premier jour de ponte des femelles sur les hôtes de grande taille est significativement différent de la moyenne, indépendamment de l'âge de la femelle à ce moment. Cependant, sur des hôtes petits, bien que restant favorable aux mâles dans l'ensemble, une plus grande proportion de femelles à partir des premiers jours de ponte a pu être observée.
    Notes: Abstract The sex ratio of the progeny of single females parasitizing large hosts favoured the females (sex ratio=0.26); but on small hosts favoured the males (0.73). No differences in mortality of the sexes were detected. The sex ratio was independent of female age when large hosts were used. The percentage of males observed in the progeny of the first day of female oviposition was significantly greater than the mean, irrespective of the age at which female oviposition began. When females were exposed to small hosts, a greater percentage of females was observed in the progeny from the last days of oviposition.
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    Entomologia experimentalis et applicata 55 (1990), S. 1-10 
    ISSN: 1570-7458
    Keywords: Parasitoid ; hemocytes ; inhibition of encapsulation ; Hymenoptera ; Lepidoptera hosts
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Description / Table of Contents: Résumé L'ichneumonide Campoletis sonorensis Carlson, endoparasitoïde larvaire, se développe dans de nombreuses espèces de Lépidoptères. Son statut de généraliste est dû, notamment, à son aptitude à déjouer les défenses immunitaires de ses hôtes, c.a.d. la formation d'une capsule d'hémocytes autour de l'oeuf ou de la larve parasite. Cependant, chez le noctuide Spodoptera frugiperda J.E. Smith, C. sonorensis est encapsulé dans 40% des larves qu'il parasite. Nous avons étudié la population hémocytaire de deux catégories de larves de S. frugiperda, celles qualifiées de ‘résistantes’ à C. sonorensis, et qui arrêtent son développement, et celles ‘susceptibles’ où le parasitoïde échappe à l'encapsulation. Cinq types d'hémocytes ont été identifiés: les prohémocytes (PR), les sphérulocytes (SP), les granulocytes (GR), les plasmatocytes (PL) et les oenocytoïdes (OE). Chez les hôtes susceptibles et résistants, le parasite provoque une baisse identique de la concentration totale des hémocytes dans l'hémolymphe (THC). Par contre, les PLs sont davantage affectés chez les hôtes susceptibles que chez ceux résistants au parasitoïde. Les résultats montrent que, chez les hôtes susceptibles, 1) le nombre des PLs dans l'hémolymphe est davantage diminué, et 2) leur aptitude d'adhérence in vitro est davantage inhibée. Il existe donc une corrélation positive entre le degré de pathologies qui affectent les PLs de l'hôte et l'incapacité de celui-ci à encapsuler le parasitoïde. Ceci tend à démontrer le rôle-clé des PLs dans la réaction immunitaire d'encapsulation chez S. frugiperda, comme chez de nombreux insectes. De plus, ce résultat renforce l'hypothèse selon laquelle C. sonorensis éviterait l'encapsulation en agissant sur les hémocytes de l'hôte, et plus particulièrement sur les PLs. Inversement aux PLs, les GRs sont moins abondants dans l'hémolymphe des hôtes qui encapsulent C. sonorensis. Les GRs pourraient donc participer à la formation de la capsule hémocytaire. Il est possible que plusieurs facteurs contribuent à protéger C. sonorensis de l'encapsulation. Néanmoins, les pathologies affectant les hémocytes des hôtes parasités sont probablement une manifestation majeure de l'effet immunosuppresseur du parasitoïde. Les effets de C. sonorensis sur les hémocytes des larves parasitées peuvent être reproduits chez des larves saines, en leur injectant de ‘venin’ extrait des glandes du calyx des femelles parasitoïdes. Ces sécrétions provenant de la glande du calyx, et normalement injectées dans l'hôte lors de l'oviposition, sont probablment responsable, au moins en partie, de l'effet immunosuppresseur du parasitoïde. Ces résultats peuvent être comparés à ceux obtenus chez l'hôte Heliothis virescens Fabricius (lépidoptère, noctuide) qui n'encapsule jamais C. sonorensis. Bien que le parasitoïde provoque les mêmes effets pathologiques sur les hémocytes des hôtes de S. frugiperda et d'H. virescens, on constate que l'effet apparait quelques heures après l'oviposition chez H. virescens, contre 48 heures post-oviposition chez S. frugiperda. Ce délai pourrait contribuer à la résistance immunitaire de certaines larves de S. frugiperda, ‘résistantes’, à C. sonorensis.
    Notes: Abstract The egg and larval stages of the generalist endoparasitoid Campoletis sonorensis Carlson (Hymenoptera: Ichneumonidae), which normally avoid the hemocytic reaction of many Lepidopteran host species, are encapsulated in 40% of Spodoptera frugiperda J. E. Smith (Lepidoptera: Noctuidae) larvae. The effect of parasitism on inhibiting the spreading ability of S. frugiperda plasmatocytes in vitro is more pronounced in susceptible larvae which fail to encapsulate the parasitoid than in resistant ones permitting parasitoid development. This suggests that induction of plasmatocyte pathology is relevant to the successful evasion of encapsulation by the parasitoid. Some granular cells disappear from the hemolymph of the parasitized resistant larvae, which implicates their involvement in the encapsulation reaction. Calyx fluid of C. sonorensis injected into host larvae produced effects on host hemocytes identical to natural parasitism. Several mechanism may cooperate to protect the parasitoid from encapsulation. The pathological reactions by the host plasmatocytes is one main manifestation of the ‘immunosuppressive’ parasitoid effect. Results are discussed in regard to the known effects of C. sonorensis on Heliothis virescens Fabricius (Lepidoptera: Noctuidae) larval hemocytes which are totally unable to respond with a successful cellular defense reaction.
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    Entomologia experimentalis et applicata 66 (1993), S. 31-38 
    ISSN: 1570-7458
    Keywords: Eurytoma amygdali ; Hymenoptera ; Eurytomidae ; egg distribution ; superparasitism ; host discrimination ; oviposition behaviour
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The egg distribution patterns ofEurytoma amygdali Enderlein (Hymenoptera, Eurytomidae), which oviposits singly in green, developing almonds, were studied in the laboratory and in the field. In the laboratory, individual females were caged with a number of almonds and the eggs deposited in each fruit were counted. In the field, eggs were censused in almonds of different varieties at regular intervals, over four seasons (1988–91). In the susceptible ‘Retsou’ variety, eggs were uniformly distributed among fruits, both in the laboratory and in the field, as long as the mean number of eggs per almond was ≤2.5. When the mean number of eggs per almond was higher the egg distributions were random. This suggests that, up to a certain level of infestation, females were able to assess egg load of fruits and oviposit in the less infested ones. The main factor enabling the females to discriminate and select the less infested almonds for oviposition is probably a host-marking pheromone. In 1990, the same patterns of egg distribution were observed in samples taken from 5 other almond varieties that are not as susceptible as Retsou and have thicker pericarp and harder endocarp. In 1991 however, when fruits developed more rapidly than in 1990, egg distributions in 3 of these 5 varieties (Truoito, Ai, and Marcona) were not uniform. Although the mean number of eggs per fruit was low (1.2–2.0), many fruits of these varieties contained no eggs. This suggests that, in some less susceptible varieties, egg distribution might also be affected by certain fruit parameters, unfavourable for oviposition, related to the pericarp thickness and endocarp hardness.
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    Mycorrhiza 4 (1993), S. 1-4 
    ISSN: 1432-1890
    Keywords: Tropics ; Mycotrophy ; Spore dispersal ; Community composition ; Evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract This article introduces reports concerning the occurrence of mycorrhizae on epiphytes in Costa Rica, Ethiopia, Venezuela, Malaysia, and Mexico. Association of vesicular-arbuscular mycorrhizal fungi with the roots of epiphytes is not well known. Vesicular-arbuscular mycorrhizal fungi (VAM) do occur in the canopy, but are uncommon except in certain sites and host taxa. Occurrence of VAM on epiphytes may be constrained by mineral nutrient availability and spatial heterogeneity in the canopy. Nevertheless, epiphytes present unique opportunities to study influences of mycorrhizae on vascular plant community composition and on the evolution of mycorrhizal associations.
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    Biology and fertility of soils 9 (1990), S. 110-118 
    ISSN: 1432-0789
    Keywords: Kuehneltiella terricola gen. nov., sp. nov. ; Soil ciliates ; Colpodidae ; Systematics ; Evolution ; Australia
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The morphology and biology of the colpodid ciliate Kuehneltiella terricola gen. nov., sp. nov. has been investigated using living organisms, various silver impregnation methods, and scanning electron microscopy. The new species has been isolated in soil from central Australia and might be endemic to this continent. The new genus Kuehneltiella differs from its nearest relative, Bresslaua, in having a right oral polykinetid composed of a single row of dikinetids. A reinvestigation of Lynn's slides of Bresslaua insidiatrix showed that, contrary to the statement of Lynn (1979), this species has a typic colpodid right oral polykinetid, i.e., composed of many short, disordered kineties. A brief review of the literature suggests that simple, single-rowed, right oral polykinetids are apomorphic in the colpodids s. str. Further, this special character has obviously evolved independently several times within the class Colpodea and even within the colpodids s. str. An illustrated key to the genera of the family Colpodidae is provided.
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    Biology and fertility of soils 9 (1990), S. 95-100 
    ISSN: 1432-0789
    Keywords: Assulina-Valkanovia ; Testacea ; Polymorphism ; Genotypes ; Evolution ; Spruce forest ; Sphagnum
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences , Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The taxonomy and evolution of the Assulina-Valkanovia complex were investigated in a spruce forest soil which included a Sphagnum plot (GDR, Thuringia). In both habitats Assulina muscorum occurred in two colour forms (brown and colourless) and four shapes. A quantified phenospectrum from Assulina muscorum was obtained. The four shapes were distributed differently between the brown and the colourless forms in Sphagnum and soil. The shell measurements showed statistically significant differences between the brown and the colourless forms. Even between the two brown populations there were some significant differences. Each of the four shape types of brown and of colourless Assulina can be kept in clonal cultures for some time. However, without selection, single cultures eventually revert to mixed types. The four shape types show different degrees of stability. These colour and shape forms are genotypes, which can also occur for short periods in the natural habitats. The brown populations in Sphagnum and in the soil were dominated by different shape types during the period of investigation. Valkanovia elegans cannot be distinguished from Assulina muscorum type 4, but Valkanovia can inhabit both upper and lower soil horizons, whereas Assulina and its forms lives exclusively in the upper horizon (litter). Valkanovia from the lower horizon is constant in clonal culture. The conclusion of the present investigation is that there are stable and unstable constellations within a changeable genome, which give asexual groups both a taxonomic structure and a continuum of forms. Selection can increase stability, by polygenic control of features.
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    ISSN: 1432-0819
    Keywords: Key wordsZoned magma body ; Chemical variation ; ash-flow sheets ; Tephra sequence ; Differentiation ; time constraints ; Evolution
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    Topics: Geosciences
    Notes: Abstract The Rainier Mesa ash-flow is a large (1200 km3), 11.6 My old, chemically zoned unit that ranges in composition from 55 to 76% SiO2– one of the largest chemical ranges ever observed in a large volume ash-flow sheet. Two chemical trends occur in this sheet, a low silica (55–66% SiO2) and a high silica (〉66% SiO2) trend. Ninety per cent of the Rainier Mesa sheet occurs in the high silica trend. Immediately beneath the Rainier Mesa sheet is a thick tephra sequence. The chemical variation of this sequence is nearly equivalent to the high silica portion of the Rainier Mesa ash-flow sheet (about 66–78% SiO2). Throughout the tephra sequence numerous small ash-flow layers occur, and each ash-flow layer is chemically zoned from more evolved at the base to less evolved at the top. This is consistent with having been erupted from a zoned magma body. The lowest silica tephra units are at the base of the sequence and the highest silica units are at the top – that is, the large-scale chemical trend of the entire sequence is opposite to that of the individual ash-flow layers. These ash-flow layers are of very small volume. The tephra sequence provides a unique record of the incremental development of the zoned, high silica portion of the Rainier Mesa magma body.
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    Current genetics 17 (1990), S. 223-227 
    ISSN: 1432-0983
    Keywords: Orotidine-5′-phosphate decarboxylase ; Cephalosporium acremonium ; Recombinant DNA ; Evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary We have cloned the Cephalosporium acremonium pyr4 gene by cross-hybridization with the equivalent gene from Neurospora crassa, the closest relative from which this gene is available. The C. acremonium pyr4 gene complements an E. coli pyrF mutant lacking orotidine-5′-phosphate decarboxylase (OMPdecase), and most probably does not contain introns. Maxicell analysis in E. coli shows that it encodes a 46 kDa polypeptide. The C. acremonium OMPdecase contains a highly conserved pentadecapeptide characteristic for this category of enzyme. Extensive sequence comparison suggests an important role of this region in enzymatic activity.
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    ISSN: 1432-0983
    Keywords: Trypanosomes ; RNA polymerase ; Transcription ; Evolution ; Phylogeny
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    Topics: Biology
    Notes: Summary We have sequenced the genes encoding te largest subunits of the three classes of DNA-dependent RNA polymerases of Trypanosoma brucei. The nucleotide and deduced amino acid sequences were compared and aligned with the corresponding sequences of other eukaryotes. Phylogenetic relationships were subsequently calculated with a distant matrix, a bootstrapped parsimony and a maximum-likelihood method. These independent calculations resulted in trees with very similar topologies. The analyses show that all the largest subunits of T. brucei are evolutionarily distant members within each of the three RNA polymerase classes. An early separation of the trypanosomal subunits from the eukaryotic lineage might from the fundamental basis for the unusual transcription process of this species. Finally, all dendrograms show a separate ramification for the largest subunit of RNA polymerase I, II and III. RNA polymerase II and/or III form a bifurcation with the archaebacterial lineage. RNA polymerase I, however, arises separately from the eubacterial β′ lineage. This suggests that the three eukaryotic RNA polymerase classes are not simply derived by two gene duplications of an ancestral gene with subsequent differentiation.
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    ISSN: 1432-0983
    Keywords: Cyanophora paradoxa ; Ferredoxin-NADP+-oxidoreductase ; Protein-import ; Evolution
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    Topics: Biology
    Notes: Summary Cyanophora paradoxa is an important model organism for the study of the transition from endocytobiontic cyanobacteria to factual eukaryotic cell organelles. The cyanelles of these organisms possess cyanobacterial, as well as plastidic, characteristics. Although the transfer of cyanellar proteins from cytosolic into cyanellar space has been shown, the process of translocation of a known protein across the peptidoglycan layer and the envelope membranes has not been characterized. In this study we demonstrate that a specific and obligate cyanelle protein —Ferredoxin-NADP+-oxidoreductase (FNR) — is coded on the nuclear genome, synthesized on 80S ribosomes and transported from the eukaryotic cell compartment into the cyanelles of Cyanophora paradoxa, an original intracellular host-guest relation. These results indicate a gene transfer from guest to host genome and support the view that, in spite of their cyanobacterial origin, cyanelles have been evolved to cell organelles comparable to plastids.
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    Journal of molecular evolution 16 (1980), S. 149-150 
    ISSN: 1432-1432
    Keywords: Exons ; Evolution ; Heme-binding proteins
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    Topics: Biology
    Notes: Summary It is known that globin genes contain three exons with the middle exon coding for a four-helical supersecondary structure responsible for heme binding. Since this portion of the globin peptide chain can be structurally superimposed onto the cytochromec and cytochromeb 5 chains (Argos and Rossmann 1979), it can be inferred that the cytochromec gene will contain only one coding sequence while the cytochromeb 5 gene will be composed of three exons as found in the globin gene.
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    Journal of molecular evolution 16 (1980), S. 211-267 
    ISSN: 1432-1432
    Keywords: Nucleic acids ; Proteins ; Natural selection ; Genetics ; Nonrandom molecular divergence ; Nonrandom REH theory ; Evolution ; mRNA ; DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary REH theory is extended by deriving the theoretical equations that permit one to analyze the nonrandom molecular divergence of homologous genes and proteins. The nonrandomicities considered are amino acid and base composition, the frequencies with which each of the four nucleotides is replaced by one of the other three, unequal usage of degenerate codons, distribution of fixed base replacements at the three nucleotide positions within codons, and distributions of fixed base replacements among codons. The latter two distributions turn out to dominate the accuracy of genetic distance estimates. The negative binomial density is used to allow for the unequal mutability of different codon sites, and the implications of its two limiting forms, the Poisson and geometric distributions, are considered. It is shown that the fixation intensity — the average number of base replacements per variable codon - is expressible as the simple product of two factors, the first describing the asymmetry of the distribution of base replacements over the gene and the second defining the ratio of the average probability that a codon will fix a mutation to the probability that it will not. Tables are given relating these features to experimentally observable quantities inα hemoglobin,β hemoglobin, myoglobin, cytochromec, and the parvalbumin group of proteins and to the structure of their corre-sponding genes or mRNAs. The principal results are (1) more accurate methods of estimating parameters of evolutionary interest from experimental gene and protein sequence data, and (2) the fact that change in gene and protein structure has been a much less efficient process than previously believed in the sense of requiring many more base replacements to effect a given structural change than earlier estimation procedures had indicated. This inefficiency is directly traceable to Darwinian selection for the nonrandom gene or protein structures necessary for biological function. The application of these methods is illustrated by detailed consideration of the rabbitα -andβ hemoglobin mRNAs and the proteins for which they code. It is found that these two genes are separated by about 425 fixed base replacements, which is a factor of two greater than earlier estimates. The replacements are distributed over approximately 114 codon sites that were free to accept base mutations during the divergence of these two genes.
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    Journal of molecular evolution 17 (1981), S. 31-42 
    ISSN: 1432-1432
    Keywords: Pea ; Mung bean ; Genome organization ; Evolution ; Amplification ; Repetitive DNA ; Single copy DNA
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Essentially all of the sequences in the pea (Pisum sativum) genome which reassociate with single copy kinetics at standard (Tm -25°C) criterion follow repetitive kinetics at lower temperatures (about Tm-35°C). Analysis of thermal stability profiles for presumptive single copy duplexes show that they contain substantial mismatch even when formed at standard criterion. Thus most of the sequences in the pea genome which are conventionally defined as “single copy” are actually “fossil repeats” — that is, they are members of extensively diverged (mutuated) and thus presumably ancient families of repeated sequences. Coding sequences as represented by a cDNA probe prepared from poly-somal poly(A) + mRNA reassociate with single copy kinetics regardless of criterion and do not form mismatched duplexes. The coding regions thus appear to be composed of true single copy sequences but they cannot represent more than a few percent of the pea genome. Ancient diverged repeats are present, but not a prominent feature of the smaller mung bean (Vigna radiata) genome. An extension of a simple evolutionary model is proposed in which these and other differences in genome organization are considered to reflect different rates of sequence amplification or genome turnover during evolution. The model accounts for some of the differences between typical plant and animal genomes.
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    Journal of molecular evolution 17 (1981), S. 368-376 
    ISSN: 1432-1432
    Keywords: Evolution ; Phylogeny ; Maximum likelihood ; Parsimony ; Estimation ; DNA sequences
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The application of maximum likelihood techniques to the estimation of evolutionary trees from nucleic acid sequence data is discussed. A computationally feasible method for finding such maximum likelihood estimates is developed, and a computer program is available. This method has advantages over the traditional parsimony algorithms, which can give misleading results if rates of evolution differ in different lineages. It also allows the testing of hypotheses about the constancy of evolutionary rates by likelihood ratio tests, and gives rough indication of the error of the estimate of the tree.
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    Journal of molecular evolution 18 (1981), S. 15-17 
    ISSN: 1432-1432
    Keywords: Amino acid code ; Evolution ; Primitive codes ; Mitochondria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Differences between mitochondrial codes and the universal code indicate that an evolutionary simplification has taken place, rather than a return to a more primitive code. However, these differences make it evident that the universal code is not the only code possible, and therefore earlier codes may have differed markedly from the previous code. The present universal code is probably a “frozen accident.” The change in CUN codons from leucine to threonine (Neurospora vs. yeast mitochondria) indicates that neutral or near-neutral changes occurred in the corresponding proteins when this code change took place, caused presumably by a mutation in a tRNA gene.
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  • 69
    ISSN: 1432-1432
    Keywords: Monomeric hemoglobins ; Dimeric hemoglobins ; Chironomus ; Antibodies ; Evolution ; Gene duplication
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The monomeric hemoglobins ofChironomus tentans andC. pallidivittatus have been isolated and separated into their respective components by gel chromatography on Sephadex G-75 and ion-exchange chromatography on DEAE-Sephacel. The amino acid compositions of the purified components are given. The sequence of the 30 N-terminal amino acid residues of one of the monomeric components (Hb I fromC. pallidivittatus) was determined and found to be identical in almost all of its parts with the monomeric hemoglobins ofC. thummi (CTT III and CTT IV). Antibodies against the monomeric hemoglobins Hb I and Hb IIc and the dimeric fraction were highly specific and no cross reaction between dimeric and monomeric hemoglobins could be demonstrated. The antibodies against the monomers crossreact with the monomeric hemoglobins CTT III and CTT IV ofC. thummi. Taken together with genetic data, the immunological results indicate that divergence of monomeric from dimeric forms was an early event in the evolution of the various hemoglobins inChironomus.
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    Journal of molecular evolution 30 (1990), S. 489-492 
    ISSN: 1432-1432
    Keywords: Actinomyces ; Phosphotransferase ; Aminoglycoside ; Phylogenetic tree ; Evolution
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    Topics: Biology
    Notes: Summary The protein sequences of seven 3′-aminoglycoside phosphotransferases falling into the six identified types and three 6′-aminoglycoside phosphotransferases were analyzed to give a rooted phylogenetic tree. This tree supports the origin of these groups of enzymes in an ancestor closely related to the actinomycetes, and that horizontal transfer of the resistance genes occurred, possibly via transposons. The implications for genetic engineering of a novel antibiotic are discussed.
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  • 71
    ISSN: 1432-1432
    Keywords: Mitochondrial DNA ; Evolution ; Echinoderms ; Sea stars ; DNA sequence ; Mitochondrial proteins ; Mitochondrial tRNA genes
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    Notes: Summary We have cloned and sequenced over 9 kb of the mitochondrial genome from the sea starPisaster ochraceus. Within a continuous 8.0-kb fragment are located the genes for NADH dehydrogenase subunits 1, 2, 3, and 4L (ND1, ND2, ND3, and ND4L), cytochrome oxidase subunits I, II, and III (COI, COII, and COIII), and adenosine triphosphatase subunits 6 and 8 (ATPase 6 and ATPase 8). This large fragment also contains a cluster of 13 tRNA genes between ND1 and COI as well as the genes for isoleucine tRNA between ND1 and ND2, arginine tRNA between COI and ND4L, lysine tRNA between COII and ATPase 8, and the serine (UCN) tRNA between COIII and ND3. The genes for the other five tRNAs lie outside this fragment. The gene for phenylalanine tRNA is located between cytochrome b and the 12S ribosomal genes. The genes for tRNAglu and tRNAthr are 3′ to the 12S ribosomal gene. The tRNAs for histidine and serine (AGN) are adjacent to each other and lie between ND4 and ND5. These data confirm the novel gene order in mitochondrial DNA (mtDNA) of sea stars and delineate additional distinctions between the sea star and other mtDNA molecules.
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  • 72
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    Journal of molecular evolution 19 (1982), S. 20-27 
    ISSN: 1432-1432
    Keywords: GU base pairing ; RNA replication ; Globular proteins ; Genetic code ; Evolution
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    Topics: Biology
    Notes: Summary It has previously been shown that the formation of GU base pairs in RNA copying processes leads to an accumulation of G and U in both strands of the replicating RNA, which results in a non-random distribution of base triplets. In the present paper, this distribution is calculated, and, using the χ2-test, a correlation between the distribution of triplets and the amino acid composition of the evolutionarily conservative interior regions of selected globular proteins is established. It is suggested that GU wobbling in early replication of RNA could have led to the observed amino acid composition of present-day protein interiors. If this hypothesis is correct, the GU wobbling must have been very extensive in the imprecisely replicating RNA, even reaching values close to the critical for stability of its double-helical structure. Implications of the hypothesis both for the evolution of the genetic code and of proteins are discussed.
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  • 73
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    Journal of molecular evolution 19 (1983), S. 203-213 
    ISSN: 1432-1432
    Keywords: Evolution ; Phylogenetic distribution ; Repetitive-dispersed DNAs ; Speciation ; Transposons
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    Topics: Biology
    Notes: Summary We have examined the phylogenetic distribution of a spectrum ofDrosophila repetitive-dispersed DNAs ranging from structurally complex transposable elements to scrambled middle repetitive sequences. Our data suggest that unlike typical “genes” these DNAs are unstable components of the drosophilid genome. The unusual behavior of these repetitive-dispersed DNAs raises the possibility that this type of sequence may have an important role in the evolution of the family Drosophilidae.
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  • 74
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    Journal of molecular evolution 33 (1991), S. 68-75 
    ISSN: 1432-1432
    Keywords: DNA ; Genome size ; Repetitive DNA ; Amphibians ; Reptiles ; Evolution
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    Topics: Biology
    Notes: Summary Many characters differentiate amphibian from reptilian genomes. The former have, on the average, larger and more variable genome sizes, a greater repetitive DNA percentage, and a higher interspersion level among DNAs with different degrees of repetitivity. Reptiles have more reduced and uniform genome sizes, a repetitive DNA percentage generally lower than 50%, and a lower interspersion level. Other differences can be observed in the chromosome banding and in the correlations between genome size and other morphometric and functional parameters of the cell. The differences found in amphibians and reptiles seem to indicate that in these two vertebrate classes there is a different tendency toward or tolerance of the accumulation and preservation of genetically dispensable DNA fractions. This might depend either on a different propensity toward genic amplification or on the appearance, in reptiles, of stricter and more efficient constraints regulating genome size.
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  • 75
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    Journal of molecular evolution 33 (1991), S. 133-141 
    ISSN: 1432-1432
    Keywords: Y-chromosome ; DNA ; Human ; Primate ; Evolution ; PUPPY sequence ; Alu element
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    Topics: Biology
    Notes: Summary A Y-chromosomal DNA fragment has been isolated from a human Y-Charon 21A recombinant library. Evolutionary analysis of 1F5 indicates that the size and sequence of this fragment have been conserved in higher primates. Deletion mapping and in situ hybridization analysis have localized 1F5 to the middle euchromatic portion of the long arm of the human Y chromosome at Yq11.2. Sequence analysis revealed the presence of an atypical Alu element and two regions rich in polypyrimidine-polypurine residues.
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  • 76
    ISSN: 1432-1432
    Keywords: Bacteria ; Sugars ; Phosphotransferase system ; Transport proteins ; Evolution ; Sequence comparisons ; NADH dehydrogenase ; Mitochondria
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    Notes: Summary The amino acid sequences of 15 sugar permeases of the bacterial phosphoenolpyruvatedependent phosphotransferase system (PTS) were divided into four homologous segments, and these segments were analyzed to give phylogenetic trees. The permease segments fell into four clusters: the lactose-cellobiose cluster, the fructose-mannitol cluster, the glucose-N-acetylglucosamine cluster, and the sucrose-β-glucoside cluster. Sequences of the glucitol and mannose permeases (clusters 5 and 6, respectively) were too dissimilar to establish homology with the other permeases, but short regions of statistically significant sequence similarities were noted. The functional and structural relationships of these permease segments are discussed. Some of the homologous PTS permeases were found to exhibit sufficient sequence similarity to subunits 4 and 5 of the eukaryotic mitochondrial NADH dehydrogenase complex to suggest homology. Moreover, subunits 4 and 5 of this complex appeared to be homologous to each other, suggesting that these PTS and mitochondrial proteins comprise a superfamily. The integral membrane subunits of the evolutionarily divergent mannose PTS permease, the P and M subunits, exhibited limited sequence similarity to subunit 6 of the mitochondrial F1F0-ATPase and subunit 5b of cytochrome oxidase, respectively. These results suggest that PTS sugar permeases and mitochondrial proton-translocating proteins may be related, although the possibility of convergent evolution cannot be ruled out.
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  • 77
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    Journal of molecular evolution 15 (1980), S. 149-159 
    ISSN: 1432-1432
    Keywords: Genes ; REH theory ; Genetic distance ; Evolution ; mRNA ; Nucleic acids
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    Notes: Summary It is shown how REH theory in conjunction with mRNA or gene sequence data can be used to obtain estimates of the fixation intensity, the number of varions, and the total mutations fixed between homologous pairs of nucleic acids. These estimates are more accurate than those that can be derived from amino acid sequence data. The method is illustrated forα andβ hemoglobin genes and these improved estimates are compared with those made from the amino acid sequences for which those genes code. Significant differences are found between the estimates made by these two methods. For theβ hemoglobin gene sequences examined here, the fixation intensity is some-what less than the protein data had suggested, and the number of rations is considerably greater. Depending on the gene sequences examined, between 62 and 83% of the codons appear able to fix mutations during the divergences considered. This reflects the constraints of natural selection on acceptable mutations. The total number of base replacements separating the genes for human, mouse, and rabbitβ hemoglobin varies from 61 to 105 depending on the pair examined. Rabbitα andβ hemoglobin are separated by at least 290 fixed mutations. For such distantly related sequences estimates made from protein and mRNA data differ less, reflecting the higher quality of information from the many observed changes in primary structure. The effects of nonrandom gene structure on these evolutionary estimates and the fact that various genetic events are not equiprobable are discussed.
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  • 78
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    Journal of molecular evolution 21 (1984), S. 54-57 
    ISSN: 1432-1432
    Keywords: Mitochondrion ; Cytochrome C ; Rhodospirillaceae ; Endosymbiosis ; rRNA ; Evolution
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    Notes: Summary The comparative morphology and pigmentation of protists suggest that those with tubular mitochondrial cristae belong to a different lineage than those with lamellar cristae and that the evolutionary divergence might have been very early. We propose that the difference in cristal morphology is the result of separate origins of the mitochondria from endosymbionts related to the Rhodospirillaceae (purple nonsulfur bacteria) but differing in the morphology of their internal membranes. Comparisons of the cytochromes c of protists and the Rhodospirillaceae and of 16s rRNA T1 oligonucleotide catalogs in the Rhodospirillaceae do not contradict, and in fact provide support for, the idea. More extensive evidence may be lacking simply because cytochromes c have been studied in very few protists with tubular mitochondrial cristae.
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  • 79
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    Journal of molecular evolution 21 (1984), S. 72-75 
    ISSN: 1432-1432
    Keywords: Heat ; Rates of copy error ; Evolution
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    Notes: Summary Heat induces a number of premutational lesions (for example, the deamination of cytosine to uracil) in DNA and RNA. These kinds of errors occur in resting as well as replicating polynucleotides. However, an increase in temperature also raises the probability of copying error occurring in nucleic acids because of increased thermal noise in the replicative machinery. In most modern genetic systems, the majority of heat-induced lesions are efficiently repaired. It follows that the importance of heat-induced error increases as the effectiveness of repair declines. We show in this paper that the error rate of enzymatic polynucleotide copying is expected to increase monotonically with temperature. We also explore the effects of temperature variations on the early evolution of biological information transmission mechanisms.
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  • 80
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    Journal of molecular evolution 30 (1990), S. 60-71 
    ISSN: 1432-1432
    Keywords: Cysteine endopeptidase ; Cysteine proteinase ; Inhibitor ; Cystatin ; Kininogen ; Evolution ; Amino acid sequence
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    Topics: Biology
    Notes: Summary We have examined the amino acid sequences of a number of proteins that have been suggested to be related to chicken cystatin, a protein from chicken egg white that inhibits cysteine proteinases. On the basis of statistical analysis, the following proteins were found to be members of the cystatin superfamily: human cystatin A, rat cystatin A(α), human cystatin B, rat cystatin B(β), rice cystatin, human cystatin C, ox colostrum cystatin, human cystatin S, human cystatin SA, human cystatin SN, chicken cystatin, puff adder cystatin, human kininogen, ox kininogen, rat kininogen, rat T-kininogens 1 and 2, human α2HS-glycoprotein, and human histidine-rich glycoprotein. Fibronectin is shown not to be a member of this superfamily, and the c-Ha-ras oncogene protein p21(Val-12) probably is not a member also. It was convenient to divide members of the superfamily into four types on the basis of the presence of one, two, or three copies of cystatin-like segments and the presence or absence of disulfide bonds. Evolutionary dendrograms were calculated by three methods, and from these we have constructed a scheme depicting the sequence of events in the evolution of these proteins. We suggest that about 1000 million years ago a precursor containing disulfide loops appeared, and that all disulfide-containing cystatins are derived from this. We follow the evolution of the proteins of the superfamily along four main lineages, with special attention to the part that duplication of segments has played in the development of the more complex molecules.
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  • 81
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    Journal of molecular evolution 37 (1993), S. 426-434 
    ISSN: 1432-1432
    Keywords: Primate ; Evolution ; Protamine ; Polymerase chain reaction ; Sperm proteins
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    Notes: Abstract Protamine P1 genes have been sequenced by PCR amplification and direct DNA sequencing from 9 primates representing 5 major families, Cebidae (new world monkeys), Cercopithecidae (old world monkeys), Hylobatidae (gibbons), Pongidae (gorilla, orangutan, and chimpanzee), and Hominidae (human). In this recently diverged group of primates these genes are clearly orthologous but very variable, both at the DNA level and in their expressed amino acid sequences. The rate of variation amongst the protamine Pls indicates that they are amongst the most rapidly diverging polypeptides studied. However, some regions are conserved both in primates and generally in other placental mammals. These are the 13 N-terminal residues (including a region of alternating serine and arginine residues (the motif SRSR, res. 10–13) susceptible to Ser phosphorylation), a tract of six Arg residues (res. 24–29) in the center of the molecule, and a six-residue region (RCCRRR, res. 39–44), consisting of a pair of cysteines flanked by arginines. Detailed consideration of nearest neighbor matrices and trees based on maximum parsimony indicates that PI genes from humans, gorillas, and chimpanzees are very similar. The amino acid and nucleotide differences between humans and gorillas. are fewer than those between humans and chimpanzees. This finding is at variance with data from DNA-DNA hybridization and extensive globin and mitochondrial DNA sequences which place human and chimpanzee as closest relatives in the super family, Hominoidea. This may be related to the fact that protamine Pls are expressed in germ line rather than somatic cells. In contrast to the variability of the exon regions of the protamine P1 genes, the sequence of the single intron is highly conserved.
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  • 82
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    Journal of molecular evolution 38 (1994), S. 1-17 
    ISSN: 1432-1432
    Keywords: HSP70 ; Heat shock ; Evolution ; Phylogeny ; Yeast ; Multigene family ; Subcellular compartmentalization
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    Topics: Biology
    Notes: Abstract Eukaryotic genomes encode multiple 70-kDa heat-shock proteins (HSP70s). The Saccharomyces cerevisiae HSP70 family is comprised of eight members. Here we present the nucleotide sequence of the SSA3 and SSB2 genes, completing the nucleotide sequence data for the yeast HSP70 family. We have analyzed these yeast sequences as well as 29 HSP70s from 24 additional eukaryotic and prokaryotic species. Comparison of the sequences demonstrates the extreme conservation of HSP70s; proteins from the most distantly related species share at least 45% identity and more than one-sixth of the amino acids are identical in the aligned region (567 amino acids) among all proteins analyzed. Phylogenetic trees constructed by two independent methods indicate that ancient molecular and cellular events have given rise to at least four monophyletic groups of eukaryotic HSP70 proteins. Each group of evolutionarily similar HSP70s shares a common intracellular localization and is presumed to be comprised of functional homologues; these include heat-shock proteins of the cytoplasm, endoplasmic reticulum, mitochondria, and chloroplasts. HSP70s localized in mitochondria and plastids are most similar to the DnaK HSP70 homologues in purple bacteria and cyanobacteria, respectively, which is consistent with the proposed prokaryotic origin of these organelles. The analyses indicate that the major eukaryotic HSP70 groups arose prior to the divergence of the earliest eukaryotes, roughly 2 billion years ago. In some cases, as exemplified by the SSA genes encoding the cytoplasmic HSP70s of S. cerevisiae, more recent duplication events have given rise to subfamilies within the major groups. The S. cerevisiae SSB proteins comprise a unique subfamily not identified in other species to date. This subfamily appears to have resulted from an ancient gene duplication that occurred at approximately the same time as the origin of the major eukaryotic HSP70 groups.
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  • 83
    ISSN: 1432-1432
    Keywords: Drosophila melanogaster ; Evolution ; Hybrid dysgenesis ; I elements ; Transposons
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    Notes: Summary There are two categories of strains inDrosophila melanogaster with respect to the I-R system of hybrid dysgenesis. The inducer strains contain particular transposable elements named I factors. They are not present in the strains of the other category called reactive (R) strains. Defective I elements are present in the pericentromeric regions of both categories of strains. This last subfamily of I sequences has not yet been described in detail and little is known about its origin. In this paper, we report that the defective I elements display an average of 94% of sequence identity with each other and with the transposable I factor. The results suggest that they cannot be the progenitors of the present day I factors, but that each of these two subfamilies started to evolve independently several million years ago. Furthermore, the sequence comparison of these I elements with an active I factor fromDrosophila teissieri provides useful information about when the deleted I elements became immobilized.
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  • 84
    ISSN: 1432-1432
    Keywords: Repetitive DNA ; Tandem repeats ; Sequence analysis ; Recombination ; Isolated populations ; Evolution
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    Notes: Abstract The satellite DNA family pDoP102 is species specific for the cave cricket Dolichopoda schiavazzii, an endemic species of mainland and insular Tuscany. It consists of numerous tandemly arranged repeats, 102 bp in length, and evolved most probably after cladogenesis of D. schiavazzii from the D. baccettii-aegilion group within the last 2.3 ± 0.8 million years. A sequence comparison of 31 clones (53 repetition units) from three isolated populations reveals a very high degree of sequence homogeneity within the species with no evidence for any specific population features. This appears to be in contrast to the results of allozyme analyses which account for a relatively old evolutionary divergence of the Elba island population from the mainland ones. Since the assumption of actual gene flow and recent colonization is rejected, the observed sequence homogeneity is hypothesized to be maintained by recombination processes preventing fixation of newly introduced mutations on pDoP102 sequence clusters.
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  • 85
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    Journal of molecular evolution 32 (1991), S. 296-303 
    ISSN: 1432-1432
    Keywords: Prebiotic chemistry ; Primordial soup ; Oparin hypothesis ; Evolution ; Impact catastrophism
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    Notes: Summary In the traditional concept for the origin of life as proposed by Oparin and Haldane in the 1920s, prebiotic reactants became slowly concentrated in the primordial oceans and life evolved slowly from a series of highly protracted chemical reactions during the first billion years of Earth's history. However, chemical evolution may not have occurred continuously because planetesimals and asterioids impacted the Earth many times during the first billion years, may have sterilized the Earth, and required the process to start over. A rapid process of chemical evolution may have been required in order that life appeared at or before 3.5 billion years ago. Thus, a setting favoring rapid chemical evolution may be required. A chemical evolution hypothesis set forth by Woese in 1979 accomplished prebiotic reactions rapidly in droplets in giant atmospheric reflux columns. However, in 1985 Scherer raised a number of objections to Woese's hypothesis and concluded that it was not valid. We propose a mechanism for prebiotic chemistry in clouds that satisfies Scherer's concerns regarding the Woese hypothesis and includes advantageous droplet chemistry. Prebiotic reactants were supplied to the atmosphere by comets, meteorites, and interplanetary dust or synthesized in the atmosphere from simple compounds using energy sources such as ultraviolet light, corona discharge, or lightning. These prebiotic monomers would have first encountered moisture in cloud drops and precipitation. We propose that rapid prebiotic chemical evolution was facilitated on the primordial Earth by cycles of condensation and evaporation of cloud drops containing clay condensation nuclei and nonvolatile monomers. For example, amino acids supplied by, or synthesized during entry of, meteorites, comets, and interplanetary dust would have been scavenged by cloud drops containing clay condensation nuclei. Polymerization would have occurred within cloud systems during cycles of condensation, freezing, melting, and evaporation of cloud drops. We suggest that polymerization reactions occurred in the atmosphere as in the Woese hypothesis, but life originated in the ocean as in the Oparin-Haldane hypothesis. The rapidity with which chemical evolution could have occurred within clouds accommodates the time constraints suggested by recent astrophysical theories.
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    Journal of molecular evolution 32 (1991), S. 415-420 
    ISSN: 1432-1432
    Keywords: Drosophila melanogaster ; Drosophila virilis ; mastermind ; Gene comparison ; Repetitive sequences ; Homopolymers ; Evolution
    Source: Springer Online Journal Archives 1860-2000
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    Notes: Summary Themastermind gene ofDrosophila melanogaster encodes a novel, highly repetitive nuclear protein required for neural development. To identify functionally important regions we have initiated an interspecific comparison of the gene inDrosophila virilis. Mastermind transcription and genomic organization are similar in both species and sequence analysis reveals significant conservation in a major cluster of charged amino acids. In contrast, extensive variation is noted in homopolymer domains that immediately flank the acidic cluster. Distinct patterns of evolutionary change can be identified: the major difference between unique regions are occasional amino acid substitutions whereas the repetitive areas are characterized by numerous large in-frame insertions/deletions and a nearly threefold higher rate of amino acid replacement. Conservation of the acidic domain suggests that it has an important functional role whereas the hypervariable homopolymer regions appear to be under less selective constraints than adjacent unique areas.
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    Journal of molecular evolution 36 (1993), S. 448-457 
    ISSN: 1432-1432
    Keywords: Retrovirus ; HIV ; CD4 ; Minus strand ; Alternate reading frame ; Frameshift ; Divergence ; Evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary A local sequence similarity of HIV envelope proteins (gp120 and gp41) to immunoglobulins suggests that a mimicry phenomenon may form the basis of the HIV-cell membrane interaction and of HIV-induced autoimmune reaction. We explored the hypothesis of any deeper relationship between HIV env proteins and immunoglobulin family members. An overall DNA sequence similarity between gp41 coding region of env gene and the HIV-receptor CD4 gene was observed and a 14-base-long oligonucleotide, almost unique in the GenBank, was found in gp41 and CD4 genes. The alignment of env gene to CD4 gene and to 84 different sequences showed a significantly higher homology score and a nonrandom similarity in the CD4-env alignment. A significant similarity was also found between the env protein and the sequence encoded by an alternate reading frame of CD4 gene. Our observations suggest that gp41 coding region might have a different origin than the gp120 coding region of the env gene, and that a divergent evolution might link gp41 to CD4 or immunoglobulin family members. In this study the analysis of alternate-reading-frame products is also proposed as a novel approach to investigate evolutionary links and structure-function relationships.
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    Journal of molecular evolution 35 (1992), S. 156-180 
    ISSN: 1432-1432
    Keywords: DNA damage ; DNA repair ; Chromatin ; Evolution ; Nucleosomes ; Nuclear matrix ; Active genes ; Z-DNA ; Sperm ; Mutation ; Molecular clock
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Some evolutionary consequences of different rates and trends in DNA damage and repair are explained. Different types of DNA damaging agents cause nonrandom lesions along the DNA. The type of DNA sequence motifs to be preferentially attacked depends upon the chemical or physical nature of the assaulting agent and the DNA base composition. Higher-order chromatin structure, the nonrandom nucleosome positioning along the DNA, the absence of nucleosomes from the promoter regions of active genes, curved DNA, the presence of sequence-specific binding proteins, and the torsional strain on the DNA induced by an increased transcriptional activity all are expected to affect rates of damage of individual genes. Furthermore, potential Z-DNA, H-DNA, slippage, and cruciform structures in the regulatory region of some genes or in other genomic loci induced by torsional strain on the DNA are more prone to modification by genotoxic agents. A specific actively transcribed gene may be preferentially damaged over nontranscribed genes only in specific cell types that maintain this gene in active chromatin fractions because of (1) its decondensed chromatin structure, (2) torsional strain in its DNA, (3) absence of nucleosomes from its regulatory region, and (4) altered nucleosome structure in its coding sequence due to the presence of modified histones and HMG proteins. The situation in this regard of germ cell lineages is, of course, the only one to intervene in evolution. Most lesions in DNA such as those caused by UV or DNA alkylating agents tend to diminish the GC content of genomes. Thus, DNA sequences not bound by selective constraints, such as pseudogenes, will show an increase in their AT content during evolution as evidenced by experimental observations. On the other hand, transcriptionally active parts may be repaired at rates higher than inactive parts of the genome, and proliferating cells may display higher repair activities than quiescent cells. This might arise from a tight coupling of the repair process with both transcription and replication, all these processes taking place on the nuclear matrix. Repair activities differ greatly among species, and there is a good correlation between life span and repair among mammals. It is predicted that genes that are transcriptionally active in germ-cell lineages have a lower mutation rate than bulk DNA, a circumstance that is expected to be reflected in evolution. Exception to this rule might be genes containing potential Z-DNA, H-DNA, or cruciform structures in their coding or regulatory regions that appear to be refractory to repair. This study supports the molecular clock hypothesis when applied to one gene within a group of related species and contends that evolutionary rates might vary between genes and gene segments not only as a result of differences in selective constraints but also as a result of differences in the rate of damage minus rate of repair among different segments of chromatin DNA.
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    Journal of molecular evolution 36 (1993), S. 545-554 
    ISSN: 1432-1432
    Keywords: Echinoderms ; Evolution ; Phylogeny ; mtDNA ; Mitochondrial gene arrangements
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Previous analyses have demonstrated that, among the echinoderms, the sea star (class: Asteroidea) mitochondrial genome contains a large inversion in comparison to the mitochondrial DNA of sea urchins (class: Echinoidea). Polymerase chain reaction amplification, DNA cloning, and sequencing have been used to examine the relationships of the brittle stars (class: Ophiuroidea) and sea cucumbers (class: Holothuroidea) to the sea stars and sea urchins. The DNA sequence of the regions spanning potential inversion junctions in both brittle stars and sea cucumbers has been determined. This study has also revealed a highly modified tRNA cluster in the ophiuroid mitochondrial genome. Our data indicate mitochondrial gene arrangement patterns that group the sea cucumbers with sea urchins and sea stars with brittle stars. This use of molecular characters clarifies the relationships among these classes.
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    Journal of molecular evolution 39 (1994), S. 489-495 
    ISSN: 1432-1432
    Keywords: Repetitive sequences ; Sequence variability ; Evolution ; Heterochromatin ; DNA curvature
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    Notes: Abstract Two highly abundant satellite DNAs comprise 36% of the Tenebrio obscurus (Tenebrionidae, Coleoptera) genome. They are designated as satellite I and satellite II with the monomer length of 344 and 142 base pairs (bp), respectively. Both satellites differ in their nucleotide (nt) sequences, but the frequency of point mutations, well-conserved length of monomer variants, stretches of shared mutations characteristic for the process of gene conversion, and distribution of both satellites in regions of centromeric heterochromatin of all chromosomes indicate that the same evolutionary processes act on both of them with the same, or similar, rate. While satellite I shares no sequence similarity with any other known nt sequence, satellite II is 79.7% homologous with the highly abundant satellite from closely related Tenebrio molitor. Difference in the frequency of point mutations and absence of shared mutations indicating gene conversion strongly suggest that in these two closely related species mutational processes affecting satellite DNAs seem to be changed. Retarded electrophoretic mobility, due to sequence-induced curvature of DNA helix axis, was observed for T. obscurus satellite II, but not for satellite I. Although evolutionary processes act with different rates in T. obscurus and T. molitor satellites the monomer length and sequence-induced curvature are well preserved in both 142-bp satellites, as well as in, at the nt sequence level completely divergent, Palorus ratzeburgii (Tenebrionidae) satellite, indicating potential importance of these parameters in their evolution.
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  • 91
    ISSN: 1432-1432
    Keywords: Lens ; Crystallin ; Squid ; Chicken ; Gene ; Regulation ; AP-1 ; Evolution
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    Notes: Abstract Previous experiments have shown that the minimal promoters required for function of the squid SL20-1 and SL11 crystallin genes in transfected rabbit lens epithelial cells contain an overlapping AP-1/antioxidant responsive element (ARE) upstream of the TATA box. This region resembles the PL-1 and PL-2 elements of the chicken βB 1-cry stallin promoter which are essential for promoter function in transfected primary chicken lens epithelial cells. Here we demonstrate by site-directed mutagenesis that the AP-1/ARE sequence is essential for activity of the squid SL20-1 and SL11 promoters in transfected embryonic chicken lens cells and fibroblasts. Promoter activity was higher in transfected lens cells than in fibroblasts. Electrophoretic mobility shift and DNase protection experiments demonstrated the formation of numerous complexes between nuclear proteins of the embryonic chicken lens and the AP-1/ARE sequences of the squid SL20-1 and SL11 crystallin promoters. One of these complexes comigrated and cross-competed with that formed with the PL-1 element of the chicken βB1-crystallin promoter. This complex formed with nuclear extracts from the lens, heart, brain, and skeletal muscle of embryonic chickens and was eliminated by competition with a consensus AP-1 sequence. The nonfunctional mutant AP-1/ ARE sequences did not compete for complex formation. These data raise the intriguing possibility that entirely different, nonhomologous crystallin genes of the chicken and squid have convergently evolved a similar cis-acting regulatory element (AP-1/ARE) for high expression in the lens.
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  • 92
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    Journal of molecular evolution 17 (1981), S. 167-181 
    ISSN: 1432-1432
    Keywords: Evolution ; Genetics ; REH theory ; Mutations ; Natural selection ; Nucleic acids ; Proteins ; Paleogenetics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary We have independently repeated the computer simulations on which Nei and Tateno (1978) base their criticism of REH theory and have extended the analysis to include mRNAs as well as proteins. The simulation data confirm the correctness of the REH method. The high average value of the fixation intensity μ2 found by Nei and Tateno is due to two factors: 1) they reported only the five replications in which μ2 was high, excluding the forty-five replications containing the more representative data;and 2) the lack of information, inherent to protein sequence data, about fixed mutations at the third nucleotide position within codons, as the values are lower when the estimate is made from the mRNAs that code for the proteins. REH values calculated from protein or nucleic acid data on the basis of the equiprobability of genetic events underestimate, not overestimate, the total fixed mutations. In REH theory the experimental data determine the estimate T2 of the time average number of codons that have been free to fix mutations during a given period of divergence. In the method of Nei and Tateno it is assumed, despite evidence to the contrary, that every amino acid position may fix a mutation. Under the latter assumption, the measure X2 of genetic divergence suggested by Nei and Tateno is not tenable: values of X2 for theα hemoglobin divergences are less than the minimum number of fixed substitutions known to have occurred. Within the context of REH theory, a paradox, first posed by Zuckerkandl, with respect to the high rate of covarion turnover and the nature of general function sites in proteins is resolved.
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  • 93
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    Journal of molecular evolution 30 (1990), S. 333-346 
    ISSN: 1432-1432
    Keywords: Protamine ; Evolution ; Nuclear protein ; DNA condensation ; Sperm proteins
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The availability of the amino acid sequence for nine different mammalian P1 family protamines and the revised amino acid sequence of the chicken protamine galline (Oliva and Dixon 1989) reveals a much close relationship between mammalian and avian protamines than was previously thought (Nakano et al. 1976). Dot matrix analysis of all protamine genes for which genomic DNA or cDNA sequence is available reveals both marked sequence similarities in the mammalian protamine gene family and internal repeated sequences in the chicken protamine gene. The detailed alignments of the cis-acting regulatory DNA sequences shows several consensus sequence patterns, particularly the conservation of a cAMP response element (CRE) in all the protamine genes and of the regions flanking the TATA box, CAP site, N-terminal coding region, and polyadenylation signal. In addition we have found a high frequency of the CA dinucleotide immediately adjacent to the CRE element of both the protamine genes and the testis transition proteins, a feature not present in other genes, which suggests the existence of an extended CRE motif involved in the coordinate expression of protamine and transition protein genes during spermatogenesis. Overall these findings suggest the existence of an avian-mammalian P1 protamine gene line and are discussed in the context of different hypotheses for protamine gene evolution and regulation.
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  • 94
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    Journal of molecular evolution 30 (1990), S. 409-424 
    ISSN: 1432-1432
    Keywords: Phylogeny ; Tetrapods ; Morphology ; Cladistics ; Divergence ; Evolution ; Amphibians ; Reptiles ; Birds ; Mammals
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The phylogeny of the major groups of tetrapods (amphibians, reptiles, birds, and mammals) has until recently been poorly understood. Cladistic analyses of morphological data are producing new hypotheses concerning the relationships of the major groups, with a focus on the identification of monophyletic groups. Molecular phylogenies support some of these views and dispute others. Geological dates of the major evolutionary branching points are recalculated on the basis of the cladograms and new fossil finds.
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  • 95
    ISSN: 1432-1432
    Keywords: Archaebacteria ; Taxonomy ; Evolution ; DNA ; 16S rRNA ; Hybridization ; Phylogeny ; Thermoproteales
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary DNAs from 16 species of archaebacteria including 6 novel isolates were hybridized with 16S rRNAs from 7 species representing different orders or groups of the urkingdom of archaebacteria. The yields, normalized for the number of genes perµg of DNA, and the temperature stabilities of all hybrids were determined and related to each other. A taxonomic tree constructed from such fractional stability data reveals the same major divisions as that derived from comparative cataloging of 16S rRNA sequences. The extreme halophiles appear however as a distinct order besides the three known divisions of methanogens. The methanogens, the halophiles andThermoplasma form one of two clearly recognizable branches of the archaebacterial urkingdom. The order represented bySulfolobus and the related novel orderThermoproteales form the other branch. Three novel genera,Thermoproteus, Desulfurococcus and the “stiff filaments” represent three families of this order. The extremely thermophilic methanogenMethanothermus fervidus belongs to theMethanobacteriales. SN1, a methanogen from Italy, appears as another species of the genusMethanococcus. Another novel methanogen, M3, represents a genus or family of the orderMethanomicrobiales.
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  • 96
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    Journal of molecular evolution 32 (1991), S. 24-30 
    ISSN: 1432-1432
    Keywords: Short sequence distribution ; Sequence constraints ; Averaged sequence ; Sequence structure ; Asymmetric nucleotide sequences ; GC content ; Evolution ; Evolutionary constraints
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The data from a genomic library can be sorted into the frequencies of every possible tetranucleotide in the sequence. This tabulation, a short sequence distribution, contains the frequency of occurrence of the 256 tetranucleotides and thus seems to serve as a vehicle for averaging sequence information. Two such distributions can be readily compared by correlation. Reported here are correlations (Spearmanr s) of the distributions from all of the genomic libraries in GenBank 44.0 with sizes equal to or larger than that ofSalmonella typhimurium, except for the data for mouse and humans. All of the organisms examined showed highly significant correlations between the two DNA strands (not the complementarity expected from base pairing). Of 155 comparisons between libraries, 132 showed significant correlations at the 99% confidence level. Application of the correlation coefficients as a similarity matrix clustered most organisms in a phenogram in a pattern consistent with other hypotheses. This suggests a highly conserved pattern underlying all other genetic information in cellular DNA and affecting both DNA strands, perhaps caused by interaction with conserved factors necessary for DNA packaging.
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  • 97
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    Journal of molecular evolution 19 (1982), S. 80-86 
    ISSN: 1432-1432
    Keywords: Microtubules ; Tubulin ; Evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Tubulin subunits have been isolated from a variety of protists and marine invertebrates. The sources were: sperm tails of a tunicate (Ciona intestinalis), an abalone (Haliotis rufescens) and a sea anemone (Tealia crassicornis), the gill cilia of a clam (Mercenaria mercenaria), the cilia of a ciliate (Tetrahymena pyriformis) and the cytoplasm of a slime mold (Physarum polycephalum). All the β-tubulins, as characterised by their electropherograms after limited proteolytic cleavage withStaphylococcus aureus protease, were fairly similar. In contrast, two markedly different peptide patterns were found for the α-tubulins of (a) metazoan axonemes and (b) protistan axonemes, plant axonemes and slime mold cytoplasm. Metazoan axonemal α-tubulin peptide patterns could be further divided into two similar but distinct subtypes which did not correlate with the taxonomic divisions of deuterostomia and protostomia, or to different tubulins within an axoneme, or to different tubulins of flagella and cilia. We have postulated that these small differences may be accounted for by a simple glutamicaspartic acid exchange at a particular position in the α-tubulin sequence. Identical peptide patterns were observed for sea urchin and sea anemone sperm tail tubulins, proving that the metazoan type of axonemal tubulin arose before the divergence of bilateral and radial symmetric organisms. The close similarity of the slime mold cytoplasmic α-tubulin peptide pattern to protistan and plant axonemal α-tubulin patterns suggests that the same type of tubulin might be used to form both axonemal and cytoplasmic types of microtubules in protists and plants. The large structural constraints imposed upon this tubulin molecule probably allowed very little change in its primary structure, thus explaining the similarity of tubulins from organisms which diverged at such an early time in eukaryote history. Duplication and modification of the tubulin gene may then have led to the development of specific axonemal and cytoplasmic microtubules during the evolution of the metazoa.
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  • 98
    ISSN: 1432-1432
    Keywords: Microbial phylogeny ; Evolution ; Aromatic biosynthesis ; Regulatory enzymes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Pseudomonad bacterial are a phylogenetically diverse assemblage of species named within contemporary genera that includePseudomonas, Xanthomonas andAlcaligenes. Thus far, five distinct rRNA homology groups (Groups I through V) have been established by oligonucleotide cataloging and by rRNA/DNA hybridization. A pattern of enzymic features of aromatic amino acid biosynthesis (enzymological patterning) is conserved at the level of rRNA homology, five distinct and unambiguous patterns therefore existing in correspondence with the rRNA homology groups. We sorted 87 pseudomonad strains into Groups (and Subgroups) by aromatic pathway patterning. The reliability of this methodology was tested in a blind study using coded cultures of diverse pseudomonad organisms provided by American Type Culture Collection. Fourteen of 14 correct assignments were made at the Group level (the level of rRNA homology), and 12 of 14 correct assignments were made at the finer-tuned Subgroup levels. Many strains of unknown rRNA-homology affiliation had been placed into tentative rRNA groupings based upon enzymological patterning. Positive confirmation of such strains as members of the predicted rRNA homology groups was demonstrated by DNA/rRNA hybridization in nearly every case. It seems clear that the combination of these molecular approaches will make it feasible to deduce the evolution of biochemical-pathway construction and regulation in parallel with the emerging phylogenies of microbes housing these pathways.
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  • 99
    ISSN: 1432-1432
    Keywords: mtDNA ; Gene mapping ; Evolution ; Yeasts
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Mapping of sequences specifying the large and small ribosomal RNAs and six polypeptides in the circular 23.7 kbp mitochondrial DNA ofSaccharomyces exiguus has shown that these genes have the same orientation and that a 5 gene cluster is common to this DNA and the 18.9 kbp mtDNA fromTorulopsis glabrata. Included in the preserved region are juxtaposed sequences specifying ATPase subunits 6 and 9 which have the same order and orientation as analogous genes in theEscherichia coli unc operon. The above data, together with knowledge that these two sequences are dispersed in larger yeast mtDNAs, leads us to suggest that larger forms are derived from a smaller ancestral molecule that would have had some resemblance to the mtDNAs ofS. exiguus andT. glabrata.
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  • 100
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    Journal of molecular evolution 19 (1983), S. 342-345 
    ISSN: 1432-1432
    Keywords: mtDNA ; Gene mapping ; Evolution ; Yeasts
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Analysis of gene order and orientation in the circular 18.9 kbp mitochondrial DNA molecule ofTorulopsis glabrata has shown that the eight large genic sequences have the same orientation and that a five gene cluster which runs — cytochrome b, cytochrome oxidase subunit 1, ATPase subunits 6 and 9 and cytochrome oxidase subunit 2 — is common to this DNA andSaccharomyces exiguus mtDNA (see accompanying paper).
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