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  • Springer Nature  (20,981)
  • Canadian Science Publishing
  • 2020-2023  (39)
  • 1980-1984  (23,352)
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  • 1
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    Resource partitioning of phytoplankton metabolites that support bacterial heterotrophy (2020)
    Springer Nature
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ferrer-González, F. X., Widner, B., Holderman, N. R., Glushka, J., Edison, A. S., Kujawinski, E. B., & Moran, M. A. Resource partitioning of phytoplankton metabolites that support bacterial heterotrophy. ISME Journal, (2020), doi:10.1038/s41396-020-00811-y.
    Description: The communities of bacteria that assemble around marine microphytoplankton are predictably dominated by Rhodobacterales, Flavobacteriales, and families within the Gammaproteobacteria. Yet whether this consistent ecological pattern reflects the result of resource-based niche partitioning or resource competition requires better knowledge of the metabolites linking microbial autotrophs and heterotrophs in the surface ocean. We characterized molecules targeted for uptake by three heterotrophic bacteria individually co-cultured with a marine diatom using two strategies that vetted the exometabolite pool for biological relevance by means of bacterial activity assays: expression of diagnostic genes and net drawdown of exometabolites, the latter detected with mass spectrometry and nuclear magnetic resonance using novel sample preparation approaches. Of the more than 36 organic molecules with evidence of bacterial uptake, 53% contained nitrogen (including nucleosides and amino acids), 11% were organic sulfur compounds (including dihydroxypropanesulfonate and dimethysulfoniopropionate), and 28% were components of polysaccharides (including chrysolaminarin, chitin, and alginate). Overlap in phytoplankton-derived metabolite use by bacteria in the absence of competition was low, and only guanosine, proline, and N-acetyl-d-glucosamine were predicted to be used by all three. Exometabolite uptake pattern points to a key role for ecological resource partitioning in the assembly marine bacterial communities transforming recent photosynthate.
    Description: This work was supported by grants from the Gordon and Betty Moore Foundation (5503) and the National Science Foundation (IOS-1656311) to MAM, ASE, and EBK, and by the Simons Foundation grant 542391 to MAM within the Principles of Microbial Ecosystems (PriME) Collaborative.
    Repository Name: Woods Hole Open Access Server
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  • 2
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    Exploring Employee Perceptions towards Smart Working during the COVID-19 Pandemic: a Comparative Analysis of Two Italian Public Research Organizations (2021)
    Springer Nature
    Details
    Publication Date: 2022-03-16
    Description: Of all the socio-economic changes caused by the Covid-19 pandemic, the disruption to workforce organizations will probably leave the largest indelible mark. The way work will be organized in the future will be closely linked to the experience of work-ing under the same institution’s response to the pandemic. This paper aims to fill the gap in knowledge about smart working (SW) in public organizations, with a focus on the experience of the employees of two Italian research organizations, CNR and INGV. Analysing primary data, it explored and assessed how SW had been experi-enced following the implementation of governmental measures aimed at limiting the spread of COVID-19
    Description: Published
    Description: 815–833
    Description: 2TM. Divulgazione Scientifica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 3
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    Combining audio and visual displays to highlight temporal and spatial seismic patterns (2021)
    Springer Nature
    Details
    Publication Date: 2022-03-16
    Description: Data visualization, and to a lesser extent data sonification, are classic tools to the scientific community. However, these two approaches are very rarely combined, although they are highly complementary: our visual system is good at recognizing spatial patterns, whereas our auditory system is better tuned for temporal patterns. In this article, data representation methods are proposed that combine visualization, sonification, and spatial audio techniques, in order to optimize the user’s perception of spatial and temporal patterns in a single display, to increase the feeling of immersion, and to take advantage of multimodal integration mechanisms. Three seismic data sets are used to illustrate the methods, covering different physical phenomena, time scales, spatial distributions, and spatio-temporal dynamics. The methods are adapted to the specificities of each data set, and to the amount of information that the designer wants to display. This leads to further developments, namely the use of audification with two time scales, the switch from pure audification to time-modulated noise, and the switch from pure audification to sonic icons. First user feedback from live demonstrations indicates that the methods presented in this article seem to enhance the perception of spatio-temporal patterns, which is a key parameter to the understanding of seismically active systems, and a step towards apprehending the processes that drive this activity.
    Description: Published
    Description: 125–142
    Description: 7T. Variazioni delle caratteristiche crostali e "precursori"
    Description: JCR Journal
    Keywords: 04.06. Seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 4
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    Deep water inflow slowed offshore expansion of the West Antarctic Ice Sheet at the Eocene-Oligocene transition (2022)
    Springer Nature
    In:  EPIC3Nature Communications Earth & Environment, Springer Nature, 3(1)
    Details
    Publication Date: 2022-02-21
    Description: The stability of the West Antarctic Ice Sheet is threatened by the incursion of warm Circumpolar Deepwater which flows southwards via cross-shelf troughs towards the coast there melting ice shelves. However, the onset of this oceanic forcing on the development and evolution of the West Antarctic Ice Sheet remains poorly understood. Here, we use single- and multichannel seismic reflection profiles to investigate the architecture of a sediment body on the shelf of the Amundsen Sea Embayment. We estimate the formation age of this sediment body to be around the Eocene-Oligocene Transition and find that it possesses the geometry and depositional pattern of a plastered sediment drift. We suggest this indicates a southward inflow of deep water which probably supplied heat and, thus, prevented West Antarctic Ice Sheet advance beyond the coast at this time. We conclude that the West Antarctic Ice Sheet has likely experienced a strong oceanic influence on its dynamics since its initial formation.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 5
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    Short-term clustering modeling of seismicity in Eastern Aegean Sea (Greece): a retrospective forecast test of the 2017 Mw = 6.4 Lesvos, 2017 Mw = 6.6 Kos and 2020 Mw = 7.0 Samos earthquake sequences (2021)
    Springer Nature
    Details
    Publication Date: 2021-11-03
    Description: Short-term earthquake clustering properties in the Eastern Aegean Sea (Greece) area investigated through the application of an epidemic type stochastic model (Epidemic Type Earthquake Sequence; ETES). The computations are performed in an earthquake catalog covering the period 2008 to 2020 and including 2332 events with a completeness threshold of Mc = 3.1 and separated into two subcatalogs. The first subcatalog is employed for the learning period, which is between 2008/01/01 and 2016/12/31 (N = 1197 earthquakes), and used for the model’s parameters estimation. The second subcatalog from 2017/01/01 to 2020/11/10 (1135 earthquakes), in which the sequences of 2017 Mw = 6.4 Lesvos, 2017 Mw = 6.6 Kos and 2020 Mw = 7.0 Samos main shocks are included, and used for a retrospective forecast testing based on the constructed model. The estimated model parameters imply a swarm like behavior, indicating the ability of earthquakes of small to moderate magnitude above Mc to produce their own offsprings, along with the stronger earthquakes. The retrospective evaluation of the model is examined in the three aftershock sequences, where lack of foreshocks resulted in low predictability of the mainshocks, with estimated daily probabilities around 10– 5. Immediately after the mainshocks occurrence the model adjusts with notable resemblance between the expected and observed aftershock rates, particularly for earthquakes with M ≥ 3.5.
    Description: Published
    Description: 1085–1099
    Description: 6T. Studi di pericolosità sismica e da maremoto
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 6
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    Simulation of non-stationary stochastic ground motions based on recent Italian earthquakes (2021)
    Springer Nature
    Details
    Publication Date: 2021-11-29
    Description: This work presents an up-to-date model for the simulation of non-stationary ground motions, including several novelties compared to the original study of Sabetta and Pugliese (Bull Seism Soc Am 86:337–352, 1996). The selection of the input motion in the framework of earthquake engineering has become progressively more important with the growing use of nonlinear dynamic analyses. Regardless of the increasing availability of large strong motion databases, ground motion records are not always available for a given earthquake scenario and site condition, requiring the adoption of simulated time series. Among the different techniques for the generation of ground motion records, we focused on the methods based on stochastic simulations, considering the time- frequency decomposition of the seismic ground motion. We updated the non-stationary stochastic model initially developed in Sabetta and Pugliese (Bull Seism Soc Am 86:337–352, 1996) and later modified by Pousse et al. (Bull Seism Soc Am 96:2103–2117, 2006) and Laurendeau et al. (Nonstationary stochastic simulation of strong ground-motion time histories: application to the Japanese database. 15 WCEE Lisbon, 2012). The model is based on the S-transform that implicitly considers both the amplitude and frequency modulation. The four model parameters required for the simulation are: Arias intensity, significant duration, central frequency, and frequency bandwidth. They were obtained from an empirical ground motion model calibrated using the accelerometric records included in the updated Italian strong-motion database ITACA. The simulated accelerograms show a good match with the ground motion model prediction of several amplitude and frequency measures, such as Arias intensity, peak acceleration, peak velocity, Fourier spectra, and response spectra.
    Description: Published
    Description: 3287–3315
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 7
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    Insights on the Italian Seismic Network from location uncertainties (2021)
    Springer Nature
    Details
    Publication Date: 2021-12-01
    Description: Probabilistic earthquake locations provide confidence intervals for the hypocentre solutions such as errors encountered in the position, the origin time, and in magnitude. If the relationship of the parameters relative to the local arrangement of the seismic network is considered, such as the node distance, the number of stations, the seismic gap, and the quality of phase readings), the uncertainties can then provide insights on the location capability of the network. In this paper, we collect the earthquake data recorded from the Italian Seismic Network for a time span of 5 years. The data pertain to three different catalogues according to the progressive refinement phases of the location procedure: automatic location, revised location, and published location. By means of spatial analysis,we assess the distribution of the location-related and network-related estimators across the study area. These estimators are subsequently combined to assess the existence of spatial correlations at a local scale. The results indicate that the Italian network is generally able to provide robust locations at the national scale and for smaller earthquakes, and the elongated shape of Italy (and of its network) does not cause systematic bias in the locations. However, we highlight the existence of subregions in which the performance of the network is weaker. At present, a unique 2D, 3-layer velocity model is used for the earthquake location procedure, and this could represent the main limitation for the improvement of the locations. Therefore, the assessment of locally optimized velocity models is the priority for the homogenization and the improvement of the Italian Seismic Network performance.
    Description: Published
    Description: 1061–1076
    Description: 1IT. Reti di monitoraggio e sorveglianza
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
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    New trenching results along the İznik segment of the central strand of the North Anatolian Fault (Turkey): an integration with preexisting data (2021)
    Springer Nature
    Details
    Publication Date: 2021-12-06
    Description: This paper provides a new contribution to the construction of the complex and fragmentary mosaic of the Late Holocene earthquakes history of the İznik segment of the central strand of the North Anatolian Fault (CNAF) in Turkey. The CNAF clearly displays lower dextral slip rates with respect to the northern strand however, surface rupturing and large damaging earthquakes (M 〉 7) occurred in the past, leaving clear signatures in the built and natural environments. The association of these historical events to specific earthquake sources (e.g., Gemlik, İznik, or Geyve fault segments) is still a matter of debate. We excavated two trenches across the İznik fault trace near Mustafali, a village about 10 km WSW of İznik where the morphological fault scarp was visible although modified by agricultural activities. Radiocarbon and TL dating on samples collected from the trenches show that the displaced deposits are very recent and span the past 2 millennia at most. Evidence for four surface faulting events was found in the Mustafali trenches. The integration of these results with historical data and previous paleoseismological data yields an updated Late Holocene history of surface-rupturing earthquakes along the İznik Fault in 1855, 740 (715), 362, and 121 CE. Evidence for the large M7 + historical earthquake dated 1419 CE generally attributed to this fault, was not found at any trench site along the İznik fault nor in the subaqueous record. This unfit between paleoseismological, stratigraphic, and historical data highlights one more time the urge for extensive paleoseismological trenching and offshore campaigns because of the high potential to solve the uncertainties on the seismogenic history (age, earthquake location, extent of the rupture and size) of this portion of NAFZ and especially on the attribution of historical earthquakes to the causative fault.
    Description: Published
    Description: 115–128
    Description: 2T. Deformazione crostale attiva
    Description: N/A or not JCR
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 9
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    Checking the site categorization criteria and amplification factors of the 2021 draft of Eurocode 8 Part 1–1 (2021)
    Springer Nature
    Details
    Publication Date: 2021-11-29
    Description: In this paper the site categorization criteria and the corresponding site amplification factors proposed in the 2021 draft of Part 1 of Eurocode 8 (2021-draft, CEN/TC250/SC8 Working Draft N1017) are first introduced and compared with the current version of Eurocode 8, as well as with site amplification factors from recent empirical ground motion prediction equations. Afterwards, these values are checked by two approaches. First, a wide dataset of strong motion records is built, where recording stations are classified according to 2021-draft, and the spectral amplifications are empirically estimated computing the site-to-site residuals from regional and global ground motion models for reference rock conditions. Second, a comprehensive parametric numerical study of one-dimensional (1D) site amplification is carried out, based on randomly generated shear-wave velocity profiles, classified according to the new criteria. A reasonably good agreement is found by both approaches. The most relevant discrepancies occur for the shallow soft soil conditions (soil category E) that, owing to the complex interaction of shear wave velocity, soil deposit thickness and frequency range of the excitation, show the largest scatter both in terms of records and of 1D numerical simulations. Furthermore, 1D numerical simulations for soft soil conditions tend to provide lower site amplification factors than 2021-draft, as well as lower than the corresponding site-to-site residuals from records, because of higher impact of non-linear (NL) site effects in the simulations. A site-specific study on NL effects at three KiK-net stations with a significantly large amount of high-intensity recorded ground motions gives support to the 2021-draft NL reduction factors, although the very limited number of recording stations allowing such analysis prevents deriving more general implications. In the presence of such controversial arguments, it is reasonable that a standard should adopt a prudent solution, with a limited reduction of the site amplification factors to account for NL soil response, while leaving the possibility to carry out site-specific estimations of such factors when sufficient information is available to model the ground strain dependency of local soil properties.
    Description: Published
    Description: 4199–4234
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
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  • 10
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    Exceedance of design actions in epicentral areas: insights from the ShakeMap envelopes for the 2016–2017 central Italy sequence (2021)
    Springer Nature
    Details
    Publication Date: 2021-11-29
    Description: ShakeMap is the tool to evaluate the ground motion effect of earthquakes in vast areas. It is useful to delimit the zones where the shaking is expected to have been most significant, for civil defense rapid response. From the earthquake engineering point of view, it can be used to infer the seismic actions on the built environment to calibrate vulnerability models or to define the reconstruction policies based on observed damage vs shaking. In the case of long-lasting seismic sequences, it can be useful to develop ShakeMap envelopes, that is, maps of the largest ground intensity among those from the ShakeMap of (selected) events of a seismic sequence, to delimit areas where the effects of the whole sequence have been of structural engineering relevance. This study introduces ShakeMap envelopes and discusses them for the central Italy 2016–2017 seismic sequence. The specific goals of the study are: (i) to compare the envelopes and the ShakeMap of the main events of the sequence to make the case for sequence-based maps; (ii) to quantify the exceedance of design seismic actions based on the envelopes; (iii) to make envelopes available for further studies and the reconstruction planning; (iv) to gather insights on the (repeated) exceedance of design seismic actions at some sites. Results, which include considerations of uncertainty in ShakeMap, show that the sequence caused exceedance of design hazard in thousands of square kilometers. The most relevant effects of the sequence are, as expected, due to the mainshock, yet seismic actions larger than those enforced by the code for structural design are found also around the epicenters of the smaller magnitude events. At some locations, the succession of ground-shaking that has excited structures, provides insights on structural damage accumulation that has likely taken place; something that is not accounted for explicitly in modern seismic design. The envelopes developed are available as supplemental material.
    Description: Published
    Description: 5391–5414
    Description: 5T. Sismologia, geofisica e geologia per l'ingegneria sismica
    Description: JCR Journal
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  • 11
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    Automatic inspection and analysis of digital waveform images by means of convolutional neural networks (2021)
    Springer Nature
    Details
    Publication Date: 2021-12-13
    Description: Analyzing seismic data to get information about earthquakes has always been a major task for seismologists and, more in general, for geophysicists. Recently, thanks to the technological development of observation systems, more and more data are available to perform such tasks. However, this data “grow up” makes “human possibility” of data processing more complex in terms of required efforts and time demanding. That is why new technological approaches such as artificial intelligence are becoming very popular and more and more exploited. In this paper, we explore the possibility of interpreting seismic waveform segments by means of pre-trained deep learning. More specifically, we apply convolutional networks to seismological waveforms recorded at local or regional distances without any pre-elaboration or filtering. We show that such an approach can be very successful in determining if an earthquake is “included” in the seismic wave image and in estimating the distance between the earthquake epicenter and the recording station.
    Description: Published
    Description: 1347–1359
    Description: 1T. Struttura della Terra
    Description: 3T. Fisica dei terremoti e Sorgente Sismica
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 12
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    Midlatitude climatology of the ionospheric equivalent slab thickness over two solar cycles (2021)
    Springer Nature
    Details
    Publication Date: 2021-10-25
    Description: Themain climatological features of the ionospheric equivalent slab thickness (τ ) for the Northern hemispheremidlatitudes are analyzed. F2-layer peak electron density values recorded at three midlatitude ionospheric stations (Chilton 51.5° N, 0.6° W, U.K.; Roquetes 40.8° N, 0.5° E, Spain;Wallops Island 37.9° N, 75.5°W, USA) and vertical total electron content values from colocated ground-based Global Navigation Satellite System receivers are used to calculate a dataset of τ values for the last two solar cycles, considering only magnetically quiet periods. Results are presented both as grids of binned medians and as boxplots as a function of local time and month of the year, for different solar activity levels. Corresponding trends are first compared to those output by the midlatitude empirical model developed by Fox et al. (Radio Sci 26:429–438, 1991) and then discussed in the light of what is known so far. From this investigation, the strong need to implement an improved empirical model of τ has emerged. Both Space Weather and Space Geodesy applications might benefit from such model. Therefore, both the dataset and the methodology described in the paper represent a first fundamental step aimed at implementing an empirical climatological model of the ionospheric equivalent slab thickness. The study highlighted also that at midlatitudes τ shows the following main patterns: daytime values considerably smaller than nighttime ones (except in summer); well-defined maxima at solar terminator hours; a greater dispersion during nighttime and solar terminator hours; no clear and evident solar activity dependence.
    Description: Published
    Description: 124
    Description: 2A. Fisica dell'alta atmosfera
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 13
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    Fracturing and healing of basaltic magmas during explosive volcanic eruptions (2021)
    Springer Nature
    Details
    Publication Date: 2021-11-26
    Description: The eruption of basaltic magmas dominates explosive volcanism on Earth and other planets within the Solar System. The mechanism through which continuous magma fragments into volcanic particles is central in governing eruption dynamics and the ensuing hazards. However, the mechanism of fragmentation of basaltic magmas is still disputed, with both viscous and brittle mechanisms having been proposed. Here we carry out textural analysis of the products of ten eruptions from seven volcanoes by scanning electron microscopy. We find broken crystals surrounded by intact glass that testify to the brittle fragmentation of basaltic magmas during explosive activity worldwide. We then replicated the natural textures of broken crystals in laboratory experiments where variably crystallized basaltic melt was fragmented by rapid deformation. The experiments reveal that crystals are broken by the propagation of a network of fractures through magma, and that afterwards the fractures heal by viscous flow of the melt. Fracturing and healing affect gas mobility, stress distribution, and bubble and crystal size distributions in magma. Our results challenge the idea that the grain size distribution of basaltic eruption products reflects the density of fractures that initially fragmented the magma and ultimately indicate that brittle fracturing and viscous healing of magma may underlie basaltic explosive eruptions globally.
    Description: Published
    Description: 248–254
    Description: 4V. Processi pre-eruttivi
    Description: 5V. Processi eruttivi e post-eruttivi
    Description: JCR Journal
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  • 14
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    Catching the Main Ethiopian Rift evolving towards plate divergence (2022)
    Springer Nature
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    Publication Date: 2022-02-11
    Description: Magmatism accompanies rifting along divergent plate boundaries, although its role before continental breakup remains poorly understood. For example, the magma-assisted Northern Main Ethiopian Rift (NMER) lacks current volcanism and clear tectono-magmatic relationships with its contiguous rift portions. Here we define its magmatic behaviour, identifying the most recent eruptive fissures (EF) whose aphyric basalts have a higher Ti content than those of older monogenetic scoria cones (MSC), which are porphyritic and plagioclase-dominated. Despite these differences, calculations highlight a similar parental melt for EF and MSC products, suggesting only a different evolutionary history after melt generation. While MSC magmas underwent a further step of storage at intermediate crustal levels, EF magmas rose directly from the base of the crust without contamination, even below older polygenetic volcanoes, suggesting rapid propagation of transcrustal dikes across solidified magma chambers. Whether this recent condition in the NMER is stable or transient, it indicates a transition from central polygenetic to linear fissure volcanism, indicative of increased tensile conditions and volcanism directly fed from the base of the crust, suggesting transition towards mature rifting.
    Description: Published
    Description: 21821
    Description: 2V. Struttura e sistema di alimentazione dei vulcani
    Description: JCR Journal
    Keywords: 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 15
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    Neapolitan volcanoes (2021)
    Springer Nature
    Details
    Publication Date: 2021-12-24
    Description: This book serves as a guide to discovering the most interesting volcano sites in Italy. Accompanied by some extraordinary contemporary images of active Neapolitan volcanoes, it explains the main volcanic processes that have been shaping the landscape of the Campania region and influencing human settlements in this area since Greek and Roman times and that have prompted leading international scientists to visit and study this natural volcanology laboratory. While volcanology is the central topic, the book also addresses other aspects related to the area’s volcanism and is divided into three sections: 1) Neapolitan volcanic activity and processes (with a general introduction to volcanology and its development around Naples together with descriptions of the landscape and the main sites worth visiting); 2) Volcanoes and their interactions with local human settlements since the Bronze Age, recent population growth and the transformation of the territory; 3) The risks posed by Neapolitan Volcanoes, their recent activity and the problem of forecasting any future eruption.
    Description: Published
    Description: 2TM. Divulgazione Scientifica
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 16
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    Northern Hemisphere drought risk in a warming climate (2021)
    Springer Nature
    In:  EPIC3npj Climate and Atmospheric Science, Springer Nature, 4(1), ISSN: 2397-3722
    Details
    Publication Date: 2022-02-15
    Repository Name: EPIC Alfred Wegener Institut
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  • 17
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    Energy threshold changes in volcanic activity at Mt. Etna (Italy) inferred from volcanic tremor (2022)
    Springer Nature
    Details
    Publication Date: 2022-10-28
    Description: From the 2010s on, pattern classification has proven an effective method for flagging alerts of volcano unrest before eruptive activity at Mt. Etna, Italy. The analysis has been applied online to volcanic tremor data, and has supported the surveillance activity of the volcano that provides timely information to Civil Protection and other authorities. However, after declaring an alert, no one knows how long the volcano unrest will last and if a climactic eruptive activity will actually begin. These are critical aspects when considering the effects of a prolonged state of alert. An example of longstanding unrest is related to the Christmas Eve eruption in 2018, which was heralded by several months of almost continuous Strombolian activity. Here, we discuss the usage of thresholds to detect conditions leading to paroxysmal activity, and the challenges associated with defining such thresholds, leveraging a dataset of 52 episodes of lava fountains occurring in 2021. We were able to identify conservative settings regarding the thresholds, allowing for an early warning of impending paroxysm in almost all cases (circa 85% for the first 4 months in 2021, and over 90% for the whole year). The chosen thresholds also proved useful to predict that a paroxysmal activity was about to end. Such information provides reliable numbers for volcanologists for their assessments, based on visual information, which may not be available in bad weather or cloudy conditions.
    Description: Project IMPACT (A multidisciplinary Insight on the kinematics and dynamics of Magmatic Processes at Mt. Etna Aimed at identifying preCursor phenomena and developing early warning sysTems). IMPACT belongs to the Progetti Dipartimentali INGV [DIP7], https://progetti.ingv.it/index.php/it/progetti-dipartimentali/vulcani/impact#informazioni-sul-progetto.
    Description: Published
    Description: 17895
    Description: 4V. Processi pre-eruttivi
    Description: JCR Journal
    Keywords: Volcanic tremor ; Volcano monitoring ; Pattern recognition ; Self Organizing maps ; Fuzzy clustering ; Mt. Etna ; 04.06. Seismology ; 04.08. Volcanology ; 05.01. Computational geophysics
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 18
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    Evidence for late glacial oceanic carbon redistribution and discharge from the Pacific Southern Ocean (2022)
    Springer Nature
    In:  EPIC3Nature Communications, Springer Nature, 13, 12 p., ISSN: 2041-1723
    Details
    Publication Date: 2022-11-14
    Description: Southern Ocean deep-water circulation plays an important role in the global carbon cycle. On geological time-scales, upwelling along the Chilean continental margin likely contributed to the deglacial atmospheric carbon dioxide rise, but little quantitative evidence exists of carbon storage. Here, we use a new X-ray Micro-Computer-Tomography method to assess foraminiferal test dissolution as proxy for paleo-carbonate ion concentrations [CO3^2−]. Our subantarctic Southeast Pacific sediment core depth transect shows significant deep-water [CO3^2−] variations during the Last Glacial Maximum and Deglaciation (10 – 22 ka BP). We provide evidence for an increase in [CO3^2−] during the early deglacial period (15-19 ka BP), followed by a ca. 40 µmol kg^-1 reduction in Lower Circumpolar Deepwater (CDW). This decreased Pacific to Atlantic export of low-carbon CDW contributed to significantly lowered carbon storage within the Southern Ocean, highlighting the importance of a dynamic Pacific–Southern Ocean deep-water reconfiguration for shaping late-glacial oceanic carbon storage, and subsequent deglacial oceanic-atmospheric CO2 transfer.
    Repository Name: EPIC Alfred Wegener Institut
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    Southern Ocean biogenic blooms freezing-in Oligocene colder climates (2022)
    Springer Nature
    In:  EPIC3Nature Communications, Springer Nature, 13(1), pp. 1-10, ISSN: 2041-1723
    Details
    Publication Date: 2022-11-24
    Description: 〈jats:title〉Abstract〈/jats:title〉〈jats:p〉Crossing a key atmospheric CO〈jats:sub〉2〈/jats:sub〉 threshold triggered a fundamental global climate reorganisation ~34 million years ago (Ma) establishing permanent Antarctic ice sheets. Curiously, a more dramatic CO〈jats:sub〉2〈/jats:sub〉 decline (~800–400 ppm by the Early Oligocene(~27 Ma)), postdates initial ice sheet expansion but the mechanisms driving this later, rapid drop in atmospheric carbon during the early Oligocene remains elusive and controversial. Here we use marine seismic reflection and borehole data to reveal an unprecedented accumulation of early Oligocene strata (up to 2.2 km thick over 1500 × 500 km) with a major biogenic component in the Australian Southern Ocean. High-resolution ocean simulations demonstrate that a tectonically-driven, one-off reorganisation of ocean currents, caused a unique period where current instability coincided with high nutrient input from the Antarctic continent. This unrepeated and short-lived environment favoured extreme bioproductivity and enhanced sediment burial. The size and rapid accumulation of this sediment package potentially holds ~1.067 × 10〈jats:sup〉15〈/jats:sup〉 kg of the ‘missing carbon’ sequestered during the decline from an Eocene high CO〈jats:sub〉2〈/jats:sub〉-world to a mid-Oligocene medium CO〈jats:sub〉2〈/jats:sub〉-world, highlighting the exceptional role of the Southern Ocean in modulating long-term climate.〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
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    Environmental stability and phenotypic plasticity benefit the cold-water coral Desmophyllum dianthus in an acidified fjord (2022)
    Springer Nature
    In:  EPIC3Communications Biology, Springer Nature, 5(683)
    Details
    Publication Date: 2022-07-13
    Description: The stratified Chilean Comau Fjord sustains a dense population of the cold-water coral (CWC) Desmophyllum dianthus in aragonite supersaturated shallow and aragonite under- saturated deep water. This provides a rare opportunity to evaluate CWC fitness trade-offs in response to physico-chemical drivers and their variability. Here, we combined year-long reciprocal transplantation experiments along natural oceanographic gradients with an in situ assessment of CWC fitness. Following transplantation, corals acclimated fast to the novel environment with no discernible difference between native and novel (i.e. cross-transplanted) corals, demonstrating high phenotypic plasticity. Surprisingly, corals exposed to lowest ara- gonite saturation (Ωarag 〈 1) and temperature (T 〈 12.0 °C), but stable environmental condi- tions, at the deep station grew fastest and expressed the fittest phenotype. We found an inverse relationship between CWC fitness and environmental variability and propose to consider the high frequency fluctuations of abiotic and biotic factors to better predict the future of CWCs in a changing ocean.
    Repository Name: EPIC Alfred Wegener Institut
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    Mid-Pliocene El Niño/Southern Oscillation suppressed by Pacific intertropical convergence zone shift (2022)
    Springer Nature
    In:  EPIC3Nature Geoscience, Springer Nature, ISSN: 1752-0908
    Details
    Publication Date: 2022-08-16
    Description: The El Niño/Southern Oscillation (ENSO), the dominant driver of year-to-year climate variability in the equatorial Pacific Ocean, impacts climate pattern across the globe. However, the response of the ENSO system to past and potential future temperature increases is not fully understood. Here we investigate ENSO variability in the warmer climate of the mid-Pliocene (~3.0–3.3 Ma), when surface temperatures were ~2–3 °C above modern values, in a large ensemble of climate models—the Pliocene Model Intercomparison Project. We show that the ensemble consistently suggests a weakening of ENSO variability, with a mean reduction of 25% (±16%). We further show that shifts in the equatorial Pacific mean state cannot fully explain these changes. Instead, ENSO was suppressed by a series of off-equatorial processes triggered by a northward displacement of the Pacific intertropical convergence zone: weakened convective feedback and intensified Southern Hemisphere circulation, which inhibit various processes that initiate ENSO. The connection between the climatological intertropical convergence zone position and ENSO we find in the past is expected to operate in our warming world with important ramifications for ENSO variability.
    Repository Name: EPIC Alfred Wegener Institut
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    Stable aerobic and anaerobic coexistence in anoxic marine zones (2020)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Zakem, E. J., Mahadevan, A., Lauderdale, J. M., & Follows, M. J. Stable aerobic and anaerobic coexistence in anoxic marine zones. ISME Journal, 14, (2019): 288–301, doi: 10.1038/s41396-019-0523-8.
    Description: Mechanistic description of the transition from aerobic to anaerobic metabolism is necessary for diagnostic and predictive modeling of fixed nitrogen loss in anoxic marine zones (AMZs). In a metabolic model where diverse oxygen- and nitrogen-cycling microbial metabolisms are described by underlying redox chemical reactions, we predict a transition from strictly aerobic to predominantly anaerobic regimes as the outcome of ecological interactions along an oxygen gradient, obviating the need for prescribed critical oxygen concentrations. Competing aerobic and anaerobic metabolisms can coexist in anoxic conditions whether these metabolisms represent obligate or facultative populations. In the coexistence regime, relative rates of aerobic and anaerobic activity are determined by the ratio of oxygen to electron donor supply. The model simulates key characteristics of AMZs, such as the accumulation of nitrite and the sustainability of anammox at higher oxygen concentrations than denitrification, and articulates how microbial biomass concentrations relate to associated water column transformation rates as a function of redox stoichiometry and energetics. Incorporating the metabolic model into an idealized two-dimensional ocean circulation results in a simulated AMZ, in which a secondary chlorophyll maximum emerges from oxygen-limited grazing, and where vertical mixing and dispersal in the oxycline also contribute to metabolic co-occurrence. The modeling approach is mechanistic yet computationally economical and suitable for global change applications.
    Description: We are grateful for the thorough and thoughtful comments of two anonymous reviewers. We also thank Andrew Babbin for helpful comments. EJZ was supported by the Simons Foundation (Postdoctoral Fellowship in Marine Microbial Ecology). AM was supported by the Office of Naval Research (ONR #N000-14-15-1-2555). JML was supported by U.S. National Science Foundation (NSF #OCE-1259388). MJF was supported by the Gordon and Betty Moore Foundation (GBMF #3778) and the Simons Foundation: the Simons Collaboration on Ocean Processes and Ecology (SCOPE #329108) and the Simons Collaboration on Computational Biogeochemical Modeling of Marine Ecosystems (CBIOMES #549931).
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    Comparative proteomics of related symbiotic mussel species reveals high variability of host-symbiont interactions (2020)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ponnudurai, R., Heiden, S. E., Sayavedra, L., Hinzke, T., Kleiner, M., Hentschker, C., Felbeck, H., Sievert, S. M., Schlüter, R., Becher, D., Schweder, T., & Markert, S. Comparative proteomics of related symbiotic mussel species reveals high variability of host-symbiont interactions. ISME Journal, 14, (2019): 649–656, doi: 10.1038/s41396-019-0517-6.
    Description: Deep-sea Bathymodiolus mussels and their chemoautotrophic symbionts are well-studied representatives of mutualistic host–microbe associations. However, how host–symbiont interactions vary on the molecular level between related host and symbiont species remains unclear. Therefore, we compared the host and symbiont metaproteomes of Pacific B. thermophilus, hosting a thiotrophic symbiont, and Atlantic B. azoricus, containing two symbionts, a thiotroph and a methanotroph. We identified common strategies of metabolic support between hosts and symbionts, such as the oxidation of sulfide by the host, which provides a thiosulfate reservoir for the thiotrophic symbionts, and a cycling mechanism that could supply the host with symbiont-derived amino acids. However, expression levels of these processes differed substantially between both symbioses. Backed up by genomic comparisons, our results furthermore revealed an exceptionally large repertoire of attachment-related proteins in the B. thermophilus symbiont. These findings imply that host–microbe interactions can be quite variable, even between closely related systems.
    Description: Thanks to captain, crew, and pilots of the research vessels Atlantis (ROV Jason cruise AT26–10 in 2014) and Meteor (cruise M82–3 in 2010). We thank Jana Matulla, Sebastian Grund, and Annette Meuche for excellent technical assistance during sample preparation, MS measurements in the Orbitrap Classic, and TEM imaging preparation, respectively. We appreciate Nikolaus Leisch’s help with TEM image interpretation, Inna Sokolova’s advice on bivalve physiology, and Marie Zühlke’s support during manuscript revision. RP was supported by the EU-funded Marie Curie Initial Training Network ‘Symbiomics’ (project no. 264774) and by a fellowship of the Institute of Marine Biotechnology e.V. TH was supported by the German Research Foundation DFG (grant MA 6346/2–1 to SM). The Atlantis cruise was funded by a grant of the US National Science Foundation’s Dimensions of Biodiversity program to SMS (OCE-1136727).
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    Coordinated transformation of the gut microbiome and lipidome of bowhead whales provides novel insights into digestion (2020)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Miller, C. A., Holm, H. C., Horstmann, L., George, J. C., Fredricks, H. F., Van Mooy, B. A. S., & Apprill, A. Coordinated transformation of the gut microbiome and lipidome of bowhead whales provides novel insights into digestion. ISME Journal, 14, (2019): 688-701, doi: 10.1038/s41396-019-0549-y.
    Description: Whale digestion plays an integral role in many ocean ecosystems. By digesting enormous quantities of lipid-rich prey, whales support their energy intensive lifestyle, but also excrete nutrients important to ocean biogeochemical cycles. Nevertheless, whale digestion is poorly understood. Gastrointestinal microorganisms play a significant role in vertebrate digestion, but few studies have examined them in whales. To investigate digestion of lipids, and the potential contribution of microbes to lipid digestion in whales, we characterized lipid composition (lipidomes) and bacterial communities (microbiotas) in 126 digesta samples collected throughout the gastrointestinal tracts of 38 bowhead whales (Balaena mysticetus) harvested by Alaskan Eskimos. Lipidomes and microbiotas were strongly correlated throughout the gastrointestinal tract. Lipidomes and microbiotas were most variable in the small intestine and most similar in the large intestine, where microbiota richness was greatest. Our results suggest digestion of wax esters, the primary lipids in B. mysticetus prey representing more than 80% of total dietary lipids, occurred in the mid- to distal small intestine and was correlated with specific microorganisms. Because wax esters are difficult to digest by other marine vertebrates and constitute a large reservoir of carbon in the ocean, our results further elucidate the essential roles that whales and their gastrointestinal microbiotas play in the biogeochemical cycling of carbon and nutrients in high-latitude seas.
    Description: Devonshire Foundation (to CAM), Marine Mammal Center, Woods Hole Oceanographic Institution (WHOI; to CAM), WHOI Ocean Life Institute (to AA and CAM), Dalio Foundation’s Dalio Ocean Initiative (now ‘OceanX’) (to AA), National Science Foundation (OCE-1756254 and OPP-1543328 to BASVM). Samples were collected under Department of Commerce National Oceanic and Atmospheric Administration National Marine Fisheries Service permit numbers 17350-00, 17350-01, and 17350-02 to North Slope Borough Department of Wildlife Management.
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    Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters (2020)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gazitua, M. C., Vik, D. R., Roux, S., Gregory, A. C., Bolduc, B., Widner, B., Mulholland, M. R., Hallam, S. J., Ulloa, O., & Sullivan, M. B. Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters. Isme Journal, (2020), doi:10.1038/s41396-020-00825-6.
    Description: Viruses play an important role in the ecology and biogeochemistry of marine ecosystems. Beyond mortality and gene transfer, viruses can reprogram microbial metabolism during infection by expressing auxiliary metabolic genes (AMGs) involved in photosynthesis, central carbon metabolism, and nutrient cycling. While previous studies have focused on AMG diversity in the sunlit and dark ocean, less is known about the role of viruses in shaping metabolic networks along redox gradients associated with marine oxygen minimum zones (OMZs). Here, we analyzed relatively quantitative viral metagenomic datasets that profiled the oxygen gradient across Eastern Tropical South Pacific (ETSP) OMZ waters, assessing whether OMZ viruses might impact nitrogen (N) cycling via AMGs. Identified viral genomes encoded six N-cycle AMGs associated with denitrification, nitrification, assimilatory nitrate reduction, and nitrite transport. The majority of these AMGs (80%) were identified in T4-like Myoviridae phages, predicted to infect Cyanobacteria and Proteobacteria, or in unclassified archaeal viruses predicted to infect Thaumarchaeota. Four AMGs were exclusive to anoxic waters and had distributions that paralleled homologous microbial genes. Together, these findings suggest viruses modulate N-cycling processes within the ETSP OMZ and may contribute to nitrogen loss throughout the global oceans thus providing a baseline for their inclusion in the ecosystem and geochemical models.
    Description: We thank Sullivan Lab members and Heather Maughan for comments on the paper, Bess Ward for her contribution in the N-cycle context of our story, Kurt Hanselmann for his assistance in the calculations of the Gibbs-free energies, and the scientific party and crew of the R/V Atlantis (grant OCE-1356056 to MRM) for the sampling opportunity and support at sea. This work was funded in part by awards from the Agouron Institute to OU and MBS, a Gordon and Betty Moore Foundation Investigator Award (#3790) and NSF Biological Oceanography Awards (#1536989 and #1829831) to MBS, and the Millennium Science Initiative (grant ICN12_019-IMO) to OU. The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under contract no. DE-AC02-05CH11231.
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    Discovery and quantification of anaerobic nitrogen metabolisms among oxygenated tropical Cuban stony corals (2021)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Babbin, A. R., Tamasi, T., Dumit, D., Weber, L., Rodríguez, M. V. I., Schwartz, S. L., Armenteros, M., Wankel, S. D., & Apprill, A. Discovery and quantification of anaerobic nitrogen metabolisms among oxygenated tropical Cuban stony corals. ISME Journal, (2020), doi:10.1038/s41396-020-00845-2.
    Description: Coral reef health depends on an intricate relationship among the coral animal, photosynthetic algae, and a complex microbial community. The holobiont can impact the nutrient balance of their hosts amid an otherwise oligotrophic environment, including by cycling physiologically important nitrogen compounds. Here we use 15N-tracer experiments to produce the first simultaneous measurements of ammonium oxidation, nitrate reduction, and nitrous oxide (N2O) production among five iconic species of reef-building corals (Acropora palmata, Diploria labyrinthiformis, Orbicella faveolata, Porites astreoides, and Porites porites) in the highly protected Jardines de la Reina reefs of Cuba. Nitrate reduction is present in most species, but ammonium oxidation is low potentially due to photoinhibition and assimilatory competition. Coral-associated rates of N2O production indicate a widespread potential for denitrification, especially among D. labyrinthiformis, at rates of ~1 nmol cm−2 d−1. In contrast, A. palmata displays minimal active nitrogen metabolism. Enhanced rates of nitrate reduction and N2O production are observed coincident with dark net respiration periods. Genomes of bacterial cultures isolated from multiple coral species confirm that microorganisms with the ability to respire nitrate anaerobically to either dinitrogen gas or ammonium exist within the holobiont. This confirmation of anaerobic nitrogen metabolisms by coral-associated microorganisms sheds new light on coral and reef productivity.
    Description: Research was conducted in the Gardens of the Queen, Cuba in accordance with the requirements of the Republic of Cuba, conducted under permit NV2370 and NV2568 issued by the Ministerio de Relaciones Exteriores. We gratefully acknowledge funding for this research by MIT Sea Grant award #2018-DOH-49-LEV, Simons Foundation award #622065, and MIT ESI seed funding to ARB, the MIT Montrym, Ferry, and mTerra Seed Grant Funds, and the generous contributions by Dr Bruce L. Heflinger.
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    Time-series transcriptomics from cold, oxic subseafloor crustal fluids reveals a motile, mixotrophic microbial community (2021)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Seyler, L. M., Trembath-Reichert, E., Tully, B. J., & Huber, J. A. Time-series transcriptomics from cold, oxic subseafloor crustal fluids reveals a motile, mixotrophic microbial community. Isme Journal, (2020), doi:10.1038/s41396-020-00843-4.
    Description: The oceanic crustal aquifer is one of the largest habitable volumes on Earth, and it harbors a reservoir of microbial life that influences global-scale biogeochemical cycles. Here, we use time series metagenomic and metatranscriptomic data from a low-temperature, ridge flank environment representative of the majority of global hydrothermal fluid circulation in the ocean to reconstruct microbial metabolic potential, transcript abundance, and community dynamics. We also present metagenome-assembled genomes from recently collected fluids that are furthest removed from drilling disturbances. Our results suggest that the microbial community in the North Pond aquifer plays an important role in the oxidation of organic carbon within the crust. This community is motile and metabolically flexible, with the ability to use both autotrophic and organotrophic pathways, as well as function under low oxygen conditions by using alternative electron acceptors such as nitrate and thiosulfate. Anaerobic processes are most abundant in subseafloor horizons deepest in the aquifer, furthest from connectivity with the deep ocean, and there was little overlap in the active microbial populations between sampling horizons. This work highlights the heterogeneity of microbial life in the subseafloor aquifer and provides new insights into biogeochemical cycling in ocean crust.
    Description: The Gordon and Betty Moore Foundation sponsored most of the observatory components at North Pond through grant GBMF1609. This work was supported by NSF OCE-1062006, OCE-1745589 and OCE-1635208 to J.A.H. E.T.R. was supported by a NASA Postdoctoral Fellowship with the NASA Astrobiology Institute and a L’Oréal USA For Women in Science Fellowship. The Center for Dark Energy Biosphere Investigations (C-DEBI OCE-0939564) also supported the participation of J.A.H. and B.T. This is C-DEBI contribution number 548.
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    Quantifying the effects of hydrogen on carbon assimilation in a seafloor microbial community associated with ultramafic rocks (2021)
    Springer Nature
    Details
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Coskun, O. K., Vuillemin, A., Schubotz, F., Klein, F., Sichel, S. E., Eisenreich, W., & Orsi, W. D. Quantifying the effects of hydrogen on carbon assimilation in a seafloor microbial community associated with ultramafic rocks. Isme Journal. (2021), https://doi.org/10.1038/s41396-021-01066-x.
    Description: Thermodynamic models predict that H2 is energetically favorable for seafloor microbial life, but how H2 affects anabolic processes in seafloor-associated communities is poorly understood. Here, we used quantitative 13C DNA stable isotope probing (qSIP) to quantify the effect of H2 on carbon assimilation by microbial taxa synthesizing 13C-labeled DNA that are associated with partially serpentinized peridotite rocks from the equatorial Mid-Atlantic Ridge. The rock-hosted seafloor community was an order of magnitude more diverse compared to the seawater community directly above the rocks. With added H2, peridotite-associated taxa increased assimilation of 13C-bicarbonate and 13C-acetate into 16S rRNA genes of operational taxonomic units by 146% (±29%) and 55% (±34%), respectively, which correlated with enrichment of H2-oxidizing NiFe-hydrogenases encoded in peridotite-associated metagenomes. The effect of H2 on anabolism was phylogenetically organized, with taxa affiliated with Atribacteria, Nitrospira, and Thaumarchaeota exhibiting the most significant increases in 13C-substrate assimilation in the presence of H2. In SIP incubations with added H2, an order of magnitude higher number of peridotite rock-associated taxa assimilated 13C-bicarbonate, 13C-acetate, and 13C-formate compared to taxa that were not associated with peridotites. Collectively, these findings indicate that the unique geochemical nature of the peridotite-hosted ecosystem has selected for H2-metabolizing, rock-associated taxa that can increase anabolism under high H2 concentrations. Because ultramafic rocks are widespread in slow-, and ultraslow-spreading oceanic lithosphere, continental margins, and subduction zones where H2 is formed in copious amounts, the link between H2 and carbon assimilation demonstrated here may be widespread within these geological settings.
    Description: This work was supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)—Project-ID 364653263—TRR 235 to WDO and WE, and under Germany’s Excellence Strategy—EXC 2077-390741603. The work was also supported by the Dalio Explore Fund and LMU Mentoring Program. Open Access funding enabled and organized by Projekt DEAL.
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    Sea ice surface temperatures from helicopter-borne thermal infrared imaging during the MOSAiC expedition (2022)
    Springer Nature
    In:  EPIC3Scientific Data, Springer Nature, 9(1), ISSN: 2052-4463
    Details
    Publication Date: 2022-06-27
    Description: The sea ice surface temperature is important to understand the Arctic winter heat budget. We conducted 35 helicopter flights with an infrared camera in winter 2019/2020 during the Multidisciplinary Drifting Observatory for the Study of Arctic Climate (MOSAiC) expedition. The flights were performed from a local, 5 to 10 km scale up to a regional, 20 to 40 km scale. The infrared camera recorded thermal infrared brightness temperatures, which we converted to surface temperatures. More than 150000 images from all flights can be investigated individually. As an advanced data product, we created surface temperature maps for every flight with a 1 m resolution. We corrected image gradients, applied an ice drift correction, georeferenced all pixels, and corrected the surface temperature by its natural temporal drift, which results in time-fixed surface temperature maps for a consistent analysis of one flight. The temporal and spatial variability of sea ice characteristics is an important contribution to an increased understanding of the Arctic heat budget and, in particular, for the validation of satellite products.
    Repository Name: EPIC Alfred Wegener Institut
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    Diversity and origins of bacterial and archaeal viruses on sinking particles reaching the abyssal ocean (2022)
    Springer Nature
    Details
    Publication Date: 2022-06-14
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Luo, E., Leu, A. O., Eppley, J. M., Karl, D. M., & DeLong, E. F. Diversity and origins of bacterial and archaeal viruses on sinking particles reaching the abyssal ocean. ISME Journal, 16, : 1627–1635, https://doi.org/10.1038/s41396-022-01202-1.
    Description: Sinking particles and particle-associated microbes influence global biogeochemistry through particulate matter export from the surface to the deep ocean. Despite ongoing studies of particle-associated microbes, viruses in these habitats remain largely unexplored. Whether, where, and which viruses might contribute to particle production and export remain open to investigation. In this study, we analyzed 857 virus population genomes associated with sinking particles collected over three years in sediment traps moored at 4000 m in the North Pacific Subtropical Gyre. Particle-associated viruses here were linked to cellular hosts through matches to bacterial and archaeal metagenome-assembled genome (MAG)-encoded prophages or CRISPR spacers, identifying novel viruses infecting presumptive deep-sea bacteria such as Colwellia, Moritella, and Shewanella. We also identified lytic viruses whose abundances correlated with particulate carbon flux and/or were exported from the photic to abyssal ocean, including cyanophages. Our data are consistent with some of the predicted outcomes of the viral shuttle hypothesis, and further suggest that viral lysis of both autotrophic and heterotrophic prokaryotes may play a role in carbon export. Our analyses revealed the diversity and origins of prevalent viruses found on deep-sea sinking particles and identified prospective viral groups for future investigation into processes that govern particle export in the open ocean.
    Description: This project is funded by grants from the Simons Foundation (#329108 to EFD and DMK, #721223 to EFD, and #721252 to DMK) and the Gordon and Betty Moore Foundation (GBMF3777 to EFD and GBMF3794 to DMK). Partial support for EL was provided by the Natural Sciences and Engineering Research Council of Canada (PGSD3-487490-2016).
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    Intracellular nitrate storage by diatoms can be an important nitrogen pool in freshwater and marine ecosystems (2022)
    Springer Nature
    In:  EPIC3Communications Earth & Environment, Springer Nature, 3(1), ISSN: 2662-4435
    Details
    Publication Date: 2022-07-06
    Description: Identifying and quantifying nitrogen pools is essential for understanding the nitrogen cycle in aquatic ecosystems. The ubiquitous diatoms represent an overlooked nitrate pool as they can accumulate nitrate intracellularly and utilize it for nitrogen assimilation, dissipation of excess photosynthetic energy, and Dissimilatory Nitrate Reduction to Ammonium (DNRA). Here, we document the global co-occurrence of diatoms and intracellular nitrate in phototrophic microbial communities in freshwater (n = 69), coastal (n = 44), and open marine (n = 4) habitats. Diatom abundance and total intracellular nitrate contents in water columns, sediments, microbial mats, and epilithic biofilms were highly significantly correlated. In contrast, diatom community composition had only a marginal influence on total intracellular nitrate contents. Nitrate concentrations inside diatom cells exceeded ambient nitrate concentrations ∼100–4000-fold. The collective intracellular nitrate pool of the diatom community accounted for 〈1% of total nitrate in pelagic habitats and 65–95% in benthic habitats. Accordingly, nitrate-storing diatoms are emerging as significant contributors to benthic nitrogen cycling, in particular through Dissimilatory Nitrate Reduction to Ammonium activity under anoxic conditions.
    Repository Name: EPIC Alfred Wegener Institut
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    Support for the Slope Sea as a major spawning ground for Atlantic bluefin tuna: evidence from larval abundance, growth rates, and particle-tracking simulations (2022)
    Canadian Science Publishing
    Details
    Publication Date: 2022-08-05
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Hernandez, C. M., Richardson, D. E., Rypina, I. I., Chen, K., Marancik, K. E., Shulzitski, K., & Llopiz, J. K. Support for the Slope Sea as a major spawning ground for Atlantic bluefin tuna: evidence from larval abundance, growth rates, and particle-tracking simulations. Canadian Journal of Fisheries and Aquatic Sciences, 79(5), (2021): 814-824, https://doi.org/10.1139/cjfas-2020-0444.
    Description: Atlantic bluefin tuna (Thunnus thynnus) are commercially and ecologically valuable, but management is complicated by their highly migratory lifestyle. Recent collections of bluefin tuna larvae in the Slope Sea off northeastern United States have opened questions about how this region contributes to population dynamics. We analyzed larvae collected in the Slope Sea and the Gulf of Mexico in 2016 to estimate larval abundance and growth rates and used a high-resolution regional ocean circulation model to estimate spawning locations and larval transport. We did not detect a regional difference in growth rates, but found that Slope Sea larvae were larger than Gulf of Mexico larvae prior to exogenous feeding. Slope Sea larvae generally backtracked to locations north of Cape Hatteras and would have been retained within the Slope Sea until the early juvenile stage. Overall, our results provide supporting evidence that the Slope Sea is a major spawning ground that is likely to be important for population dynamics. Further study of larvae and spawning adults in the region should be prioritized to support management decisions.
    Description: Ship time was supported by NOAA, the Bureau of Ocean Energy Management, and the US Navy through interagency agreements for Atlantic Marine Assessment Program for Protected Species (AMAPPS). CMH and JKL received funding from the Woods Hole Oceanographic Institution’s Ocean Life Institute (#13080700) and Academic Programs Office. CMH was additionally supported by the Adelaide and Charles Link Foundation and the J. Seward Johnson Endowment in support of the Woods Hole Oceanographic Institution’s Marine Policy Center. IIR, KC, and JKL were supported by a US National Science Foundation (NSF) grant (OCE-1558806). JKL was additionally supported by the Lenfest Fund for Early Career Scientists and the Early Career Scientist Fund at Woods Hole Oceanographic Institution.
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    Physiological dynamics of chemosynthetic symbionts in hydrothermal vent snails (2020)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Breusing, C., Mitchell, J., Delaney, J., Sylva, S. P., Seewald, J. S., Girguis, P. R., & Beinart, R. A. Physiological dynamics of chemosynthetic symbionts in hydrothermal vent snails. Isme Journal, (2020), doi:10.1038/s41396-020-0707-2.
    Description: Symbioses between invertebrate animals and chemosynthetic bacteria form the basis of hydrothermal vent ecosystems worldwide. In the Lau Basin, deep-sea vent snails of the genus Alviniconcha associate with either Gammaproteobacteria (A. kojimai, A. strummeri) or Campylobacteria (A. boucheti) that use sulfide and/or hydrogen as energy sources. While the A. boucheti host–symbiont combination (holobiont) dominates at vents with higher concentrations of sulfide and hydrogen, the A. kojimai and A. strummeri holobionts are more abundant at sites with lower concentrations of these reductants. We posit that adaptive differences in symbiont physiology and gene regulation might influence the observed niche partitioning between host taxa. To test this hypothesis, we used high-pressure respirometers to measure symbiont metabolic rates and examine changes in gene expression among holobionts exposed to in situ concentrations of hydrogen (H2: ~25 µM) or hydrogen sulfide (H2S: ~120 µM). The campylobacterial symbiont exhibited the lowest rate of H2S oxidation but the highest rate of H2 oxidation, with fewer transcriptional changes and less carbon fixation relative to the gammaproteobacterial symbionts under each experimental condition. These data reveal potential physiological adaptations among symbiont types, which may account for the observed net differences in metabolic activity and contribute to the observed niche segregation among holobionts.
    Description: We thank the Schmidt Ocean Institute, the crew of the R/V Falkor and the pilots of the ROV ROPOS for facilitating the sample collections and shipboard experiments, and the Broad Institute Microbial ‘Omics Core for preparing and sequencing the transcriptomic libraries. This material is based in part upon work supported by the National Science Foundation under Grant Numbers NSF OCE-1536653 (to PRG), OCE-1536331 (to RAB and JSS), OCE-1819530 and OCE-1736932 (to RAB).
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  • 34
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    Status and future recommendations for recording and monitoring litter on the Arctic seafloor (2022)
    Canadian Science Publishing
    In:  EPIC3Arctic Science, Canadian Science Publishing, 0(ja), ISSN: 2368-7460
    Details
    Publication Date: 2022-11-30
    Description: 〈jats:p〉 Marine litter in the Arctic Basin is influenced by transport from Atlantic and Pacific waters. This highlights the need for harmonization of guidelines across regions. Monitoring can be used to assess temporal and spatial trends but can also be used to assess if environmental objectives are reached, for example to evaluate the effectiveness of mitigation measures. Seafloor monitoring by trawling needs substantial resources and specific sampling strategies to be sufficiently robust to demonstrate changes over time. Observation and visual evaluation in shallow and deep waters using towed camera systems, ROVs and submersibles are well suited for the Arctic environment. The use of imagery still needs to be adjusted through automation and image analyses, including deep learning approaches and data management, but will also serve to monitor areas with a rocky seafloor. We recommend developing a monitoring plan for seafloor litter by selecting representative sites for visual inspection that cover different depths and substrata in marine landscapes, and recording the litter collected or observed across all forms of seafloor sampling or imaging. We need better coverage and knowledge of status of seafloor litter for the whole Arctic and recommend initiatives to be taken for regions where such knowledge is lacking. 〈/jats:p〉
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , NonPeerReviewed
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    Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments (2021)
    Springer Nature
    Details
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Castro, S. P., Borton, M. A., Regan, K., de Angelis, I. H., Wrighton, K. C., Teske, A. P., Strous, M., & Ruff, S. E. Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments. Isme Journal. (2021), https://doi.org/10.1038/s41396-021-01026-5.
    Description: Hydrothermal sediments contain large numbers of uncultured heterotrophic microbial lineages. Here, we amended Guaymas Basin sediments with proteins, polysaccharides, nucleic acids or lipids under different redox conditions and cultivated heterotrophic thermophiles with the genomic potential for macromolecule degradation. We reconstructed 20 metagenome-assembled genomes (MAGs) of uncultured lineages affiliating with known archaeal and bacterial phyla, including endospore-forming Bacilli and candidate phylum Marinisomatota. One Marinisomatota MAG had 35 different glycoside hydrolases often in multiple copies, seven extracellular CAZymes, six polysaccharide lyases, and multiple sugar transporters. This population has the potential to degrade a broad spectrum of polysaccharides including chitin, cellulose, pectin, alginate, chondroitin, and carrageenan. We also describe thermophiles affiliating with the genera Thermosyntropha, Thermovirga, and Kosmotoga with the capability to make a living on nucleic acids, lipids, or multiple macromolecule classes, respectively. Several populations seemed to lack extracellular enzyme machinery and thus likely scavenged oligo- or monomers (e.g., MAGs affiliating with Archaeoglobus) or metabolic products like hydrogen (e.g., MAGs affiliating with Thermodesulfobacterium or Desulforudaceae). The growth of methanogens or the production of methane was not observed in any condition, indicating that the tested macromolecules are not degraded into substrates for methanogenesis in hydrothermal sediments. We provide new insights into the niches, and genomes of microorganisms that actively degrade abundant necromass macromolecules under oxic, sulfate-reducing, and fermentative thermophilic conditions. These findings improve our understanding of the carbon flow across trophic levels and indicate how primary produced biomass sustains complex and productive ecosystems.
    Description: We are grateful to the captain and crew of the R/V Atlantis AT37-06 as well as the crew of the human occupied vehicle Alvin for their tireless support. Sampling at Guaymas Basin was supported by NSF (OCE-1357238).
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    Southern resident killer whales encounter higher prey densities than northern resident killer whales during summer (2022)
    Canadian Science Publishing
    Details
    Publication Date: 2022-05-27
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Sato, M., Trites, A. W., & Gauthier, S. Southern resident killer whales encounter higher prey densities than northern resident killer whales during summer. Canadian Journal of Fisheries and Aquatic Sciences, 78(11), (2021): 1732–1743, https://doi.org/10.1139/cjfas-2020-0445.
    Description: The decline of southern resident killer whales (Orcinus orca) may be due to a shortage of prey, but there is little data to test this hypothesis. We compared the availability of prey (Chinook salmon, Oncorhynchus tshawytscha) sought by southern residents in Juan de Fuca Strait during summer with the abundance and distribution of Chinook available to the much larger and growing population of northern resident killer whales feeding in Johnstone Strait. We used ship-based multifrequency echosounders to identify differences in prey fields that may explain the dynamics of these two killer whale populations. Contrary to expectations, we found that both killer whale habitats had patchy distributions of prey that did not differ in their frequencies of occurrence, nor in the size compositions of individual fish. However, the density of fish within each patch was 4–6 times higher in the southern resident killer whale habitat. These findings do not support the hypothesis that southern resident killer whales are experiencing a prey shortage in the Salish Sea during summer and suggest a combination of other factors is affecting overall foraging success.
    Description: This study was funded by Fisheries and Oceans Canada.
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    Viral elements and their potential influence on microbial processes along the permanently stratified Cariaco Basin redoxcline (2020)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Mara, P., Vik, D., Pachiadaki, M. G., Suter, E. A., Poulos, B., Taylor, G. T., Sullivan, M. B., & Edgcomb, V. P. Viral elements and their potential influence on microbial processes along the permanently stratified Cariaco Basin redoxcline. ISME Journal, (2020), doi:10.1038/s41396-020-00739-3.
    Description: Little is known about viruses in oxygen-deficient water columns (ODWCs). In surface ocean waters, viruses are known to act as gene vectors among susceptible hosts. Some of these genes may have metabolic functions and are thus termed auxiliary metabolic genes (AMGs). AMGs introduced to new hosts by viruses can enhance viral replication and/or potentially affect biogeochemical cycles by modulating key microbial pathways. Here we identify 748 viral populations that cluster into 94 genera along a vertical geochemical gradient in the Cariaco Basin, a permanently stratified and euxinic ocean basin. The viral communities in this ODWC appear to be relatively novel as 80 of these viral genera contained no reference viral sequences, likely due to the isolation and unique features of this system. We identify viral elements that encode AMGs implicated in distinctive processes, such as sulfur cycling, acetate fermentation, signal transduction, [Fe–S] formation, and N-glycosylation. These AMG-encoding viruses include two putative Mu-like viruses, and viral-like regions that may constitute degraded prophages that have been modified by transposable elements. Our results provide an insight into the ecological and biogeochemical impact of viruses oxygen-depleted and euxinic habitats.
    Description: This work was supported by the National Science Foundation grant OCE-1336082 to VPE, OCE-1335436 to GTT, OCE-1536989, a Moore Foundation Award (#3790) to MBS, and WHOI subaward A101259 to MP. The sequencing conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office of Science of the U.S. Department of Energy under contract no. DE-AC02-05CH11231.
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    Sediment dynamics of a divergent bay-marsh complex (2020)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © Springer Nature , 2020. This article is posted here by permission of Springer Nature for personal use, not for redistribution. The definitive version was published in Nowacki, D. J., & Ganju, N. K. Sediment dynamics of a divergent bay-marsh complex. Estuaries and Coasts, (2020), doi:10.1007/s12237-020-00855-5.
    Description: Bay–marsh systems, composed of an embayment surrounded by fringing marsh incised by tidal channels, are widely distributed coastal environments. External sediment availability, marsh-edge erosion, and sea-level rise acting on such bay–marsh complexes may drive diverse sediment-flux regimes. These factors reinforce the ephemeral and dynamic nature of fringing marshes: material released by marsh-edge erosion becomes part of a bay–marsh exchange that fuels the geomorphic evolution of the coupled system. The dynamics of this sediment exchange determine the balance among seaward export, deposition on the embayment seabed, flux into tidal channels, and import to the marsh platform. In this work, we investigate the sediment dynamics of a transgressive bay–marsh complex and link them to larger-scale considerations of its geomorphic trajectory. Grand Bay, Alabama/Mississippi, is a shallow microtidal embayment surrounded by salt marshes with lateral erosion rates of up to 5 m year−1. We collected 6 months of oceanographic data at four moorings within Grand Bay and its tidal channels to assess hydrographic conditions and net sediment-flux patterns and augmented the observations with numerical modeling. The observations imply a divergent sedimentary system in which a majority of the suspended sediment is exported seaward, while a smaller fraction is imported landward via tidal channels, assisting in vertical marsh-plain accumulation, maintenance of channel and intertidal-flat morphologies, and landward transgression. These results describe a dynamic system that is responsive to episodic atmospheric forcing in the absence of a strong tidal signal and the presence of severe lateral marsh loss.
    Description: We thank the staff of the Grand Bay NERR for their role in facilitating fieldwork within Grand Bay. Jonathan Pitchford, also of the Grand Bay NERR, provided the SET data. Giulio Mariotti and an anonymous reviewer are acknowledged for their helpful comments.
    Keywords: Salt marsh ; Geomorphic trajectory ; Sediment flux
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    Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions (2021)
    Springer Nature
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Bayer, B., Saito, M. A., McIlvin, M. R., Lucker, S., Moran, D. M., Lankiewicz, T. S., Dupont, C. L., & Santoro, A. E. (2020). Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions. Isme Journal, doi:10.1038/s41396-020-00828-3.
    Description: The genus Nitrospira is the most widespread group of nitrite-oxidizing bacteria and thrives in diverse natural and engineered ecosystems. Nitrospira marina Nb-295T was isolated from the ocean over 30 years ago; however, its genome has not yet been analyzed. Here, we investigated the metabolic potential of N. marina based on its complete genome sequence and performed physiological experiments to test genome-derived hypotheses. Our data confirm that N. marina benefits from additions of undefined organic carbon substrates, has adaptations to resist oxidative, osmotic, and UV light-induced stress and low dissolved pCO2, and requires exogenous vitamin B12. In addition, N. marina is able to grow chemoorganotrophically on formate, and is thus not an obligate chemolithoautotroph. We further investigated the proteomic response of N. marina to low (∼5.6 µM) O2 concentrations. The abundance of a potentially more efficient CO2-fixing pyruvate:ferredoxin oxidoreductase (POR) complex and a high-affinity cbb3-type terminal oxidase increased under O2 limitation, suggesting a role in sustaining nitrite oxidation-driven autotrophy. This putatively more O2-sensitive POR complex might be protected from oxidative damage by Cu/Zn-binding superoxide dismutase, which also increased in abundance under low O2 conditions. Furthermore, the upregulation of proteins involved in alternative energy metabolisms, including Group 3b [NiFe] hydrogenase and formate dehydrogenase, indicate a high metabolic versatility to survive conditions unfavorable for aerobic nitrite oxidation. In summary, the genome and proteome of the first marine Nitrospira isolate identifies adaptations to life in the oxic ocean and provides insights into the metabolic diversity and niche differentiation of NOB in marine environments.
    Description: We thank John B. Waterbury and Frederica Valois for providing the culture of Nitrospira marina Nb-295T and for continued advice about cultivation. The N. marina genome was sequenced as part of US Department of Energy Joint Genome Institute Community Sequencing Project 1337 to CLD, AES, and MAS in collaboration with the user community. We thank Claus Pelikan for bioinformatic assistance. This research was supported by a Simons Foundation Early Career Investigator in Marine Microbiology and Evolution Award (345889) and US National Science Foundation (NSF) award OCE-1924512 to AES. Proteomics analysis was supported by NSF awards OCE-1924554 and OCE-1850719, and NIH award R01GM135709 to MAS. BB was supported by the Austrian Science Fund (FWF) Project Number: J4426-B (“The influence of nitrifiers on the oceanic carbon cycle”), SL by the Netherlands Organization for Scientific Research (NWO) grant 016.Vidi.189.050, and CLD by NSF award OCE-125999.
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    The pine-wood nematode, Bursaphelenchusxylophilus, in Minnesota and Wisconsin: insect associates and transmission studies (1983)
    Canadian Science Publishing
    Details
    Publication Date: 1983-12-01
    Description: The pine-wood nematode, Bursaphelenchusxylophilus (Steiner and Buhrer), was most commonly extracted from Cerambycidae emerging from nematode-infested pines in Minnesota and Wisconsin during 1981 and 1982. The greatest number of nematodes were extracted from Monochamusscutellatus (Say) and Monochamuscarolinensis (Olivier). Low numbers of B. xylophilus were found in some buprestids but no nematodes were found in the curulionid and scolytid beetles examined. Two species of Cerambycidae, Monochamusmannorator (Kiby.) and M. scutellatus were associated with B. xylophilus from balsam fir in Minnesota. Bursaphelenchusxylophilus from insects associated with balsam fir were morphologically different from insects associated with pine. Dauer larvae of B. xylophilus were concentrated in the thoracic segments of M. scutellatus and Monochamusmutator (Lec.) examined. Bursaphelenchusxylophilus was transmitted to twigs during maturation feeding and to logs during oviposition by M. carolinensis, M. mutator, and M. scutellatus.
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    Nitrogen accumulation in a chronosequence of red alder communities along the Hoh River, Olympic National Park, Washington (1983)
    Canadian Science Publishing
    Details
    Publication Date: 1983-12-01
    Description: Alnusrubra Bong, dominates the first 65 – 80 years of a sere that is initiated naturally on the terraces of the Hoh River. Stands of 14, 24, and 65 years were studied to determine to what extent the Alnus stage enriched the nitrogen inventory of the site. Bare sandbars deposited by the river had a mean of 783 kg/ha nitrogen. Alnus communities caused an increase in the nitrogen inventory so that, by 65 years, total community nitrogen was 4659 kg/ha, soils held 3594 kg/ha N in the upper 45 cm, and Alnus trees held 942 kg/ha N. The nitrogen contents of the soil, Alnus wood, bark, and branches, grasses, total aboveground biomass, total belowground biomass, and sticks less than 1 cm diameter all showed significant increases from 14 to 65 years. The A. rubra stage is an important link in the nutrient inventory between unvegetated, recently deposited sandbars and the climax coniferous forests dominated by Tsugaheterophylla (Raf.) Sarg. and Piceasitchensis (Bong.) Carr.
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    Some physiological and morphological responses of Quercusmacrocarpa seedlings to flooding (1982)
    Canadian Science Publishing
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    Publication Date: 1982-06-01
    Description: Flooding for 30 days induced several changes in Quercusmacrocarpa Michx. seedlings, with stomatal closure among the earliest responses. Stomata remained more closed in flooded than in unflooded plants during the entire experimental period. Leaf water potential was consistently higher in flooded than in unflooded plants. Other responses to flooding included acceleration of ethylene production by stems; formation of hypertrophied lenticels on submerged portions of stems; growth inhibition, with greatest reduction in roots; and formation of a few adventitious roots on submerged portions of the stem above the soil line. Some of the morphological responses to flooding, especially formation of hypertrophied lenticels, appeared to be associated with increased ethylene production. Quercusmacrocarpa seedlings adapted poorly to flooding as shown by failure of stomata to reopen after an early period of flooding and low capacity for production of adventitious roots. The much greater inhibition of root growth than shoot growth by flooding will reduce drought tolerance after floodwaters recede.
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    Temperature control over root growth and root biomass in taiga forest trees (1983)
    Canadian Science Publishing
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    Publication Date: 1983-10-01
    Description: Root elongation of greenhouse-grown Alaskan taiga tree seedlings increased with increasing root temperature in all six species examined and was most temperature sensitive in warm-adapted aspen (Populustremuloides Michx.). Root elongation was slower in fine than large roots and in black spruce (Piceamariana (Mill.) B.S.P.) was less temperature sensitive in fine than in large roots. Root elongation in the laboratory was slowest in black spruce, which has an inherently slow growth rate, and most rapid in poplar (Populusbalsamifera L.) and aspen, which grow more rapidly. In contrast, field root elongation rates tended to be highest in black spruce from cold wet sites, suggesting that site factors other than soil temperature (e.g., moisture) predominated over genetic differences among species in determining field root elongation rates. The seasonal pattern of root elongation was closely correlated with soil temperature and reached maximum rates in July for all tree species (except aspen medium-sized roots). Most roots of each species were in the top 20 cm of soil. However, root growth penetrated to greater depth in warm compared with cold sites. Root biomass in a 130-year black spruce forest (1230 g/m2) comprised only 15% of total tree biomass. Root biomass of 25-year aspen and 60-year poplar sites (517 and 5385 g/m2, respectively) comprised a greater proportion (57% in poplar) of total tree biomass than in spruce.
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    Patterns of translocation of carbon in four common moss species in a black spruce (Piceamariana) dominated forest in interior Alaska (1983)
    Canadian Science Publishing
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    Publication Date: 1983-10-01
    Description: The patterns of translocation of carbon in different-age tissues of four common moss species in a black spruce (Piceamariana (Mill.) B.S.P.) dominated forest near Fairbanks, Alaska, were studied by 14C labelling and carbohydrate analysis. A simple, in-vial combustion technique was developed for combustion of small (
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    Measurement of water stress in subalpine trees: effects of temporary tissue storage methods and needle age (1982)
    Canadian Science Publishing
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    Publication Date: 1982-12-01
    Description: Water stress of subalpine conifer species may be measured with the pressure chamber after several hours of tissue storage. Tissue samples stored in cool, humid vials exhibited very little change in xylem pressure potential over a 4-h period. However, xylem pressure potential declined steadily when a source of water vapor was not available. Xylem pressure potentials of current-year and 1-year-old needles of lodgepole pine (Pinuscontorta var. latifolia Engelm.) were slightly lower than those of older needles.
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  • 46
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    Effects of thinning and nitrogen fertilization on growth of Douglas-fir: relative contribution of foliage quantity and efficiency (1983)
    Canadian Science Publishing
    Details
    Publication Date: 1983-02-01
    Description: The aboveground biomass of Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) and annual production over 7 years was studied in relation to thinning and nitrogen fertilization. Biomass yield of both treatments increased during the first 3–4 years then decreased for fertilization but not with thinning. Treatments doubled biomass production of individual trees over the study period when applied separately and quadrupled it when combined. Annual biomass production per unit of foliage (E) increased during the first 3–4 years, but was at or below control level after 7 years. The increased E accounted for 20, 37, and 27% of the stemwood dry matter response to thinning, fertilization and the combined treatments, respectively; the remainder was attributed to an increase in foliage biomass. Thinning, but not fertilization, influenced distribution of radial growth along the stem, increasing growth only below the top one-third of the stem. This pattern was related to crown development.
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  • 47
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    Deterioration of trembling aspen clones in the Great Lakes region (1981)
    Canadian Science Publishing
    Details
    Publication Date: 1981-09-01
    Description: In order to test the hypothesis that the deterioration of trembling aspen (Populustremuloides Michx.) is related to variations in climate, soil properties, and genotype, 59 trembling aspen clones were sampled in Michigan, Wisconsin, Minnesota, and Ontario. A longevity index (LI) was calculated by taking the difference between predicted basal area from normal yield tables and measured basal area for each clone. Correlations of environmental variables with LI indicate that aspen longevity decreases with increasing mean annual temperature. Under similar temperature regimes, aspen growing on xeric sites and on sites low in exchangeable Ca are most susceptible to early breakup. Since there were negligible differences in soil properties between nine pairs of adjacent deteriorating and relatively well stocked clones, we hypothesize that, under similar environmental conditions, variation in the timing of deterioration may be due to genotypic differences between clones.
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    Carbohydrate reserves and root growth potential in Douglas-fir seedlings before and after cold storage (1982)
    Canadian Science Publishing
    Details
    Publication Date: 1982-12-01
    Description: Carbohydrate reserves and root growth potential (RGP) of 2 + 0 Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) seedlings were monitored through a lifting season and during dark, cold storage. Concentrations of total nonstructural carbohydrate and extractable sugars in root and stem tissues remained relatively constant through winter, while foliar sugars showed a sharp midwinter peak at about 195 mg•g−1 dry weight. RGP was lowest in November and March and peaked in January. During storage at +2 and −1 °C, carbohydrates were depleted in all tissues through respiratory consumption. In contrast, RGP increased during the first 6 months in storage and then fell rapidly. The results do not support the view that changes in RGP are driven by changes in carbohydrate concentrations. Storage may affect frost hardiness and drought resistance through its effect on sugar concentrations.
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    A new analytical model based on the −3/2 power rule of self-thinning (1984)
    Canadian Science Publishing
    Details
    Publication Date: 1984-10-01
    Description: A nonlinear analytical model is developed to describe the relationship between average plant size (weight or volume) and stand density in single-aged, monospecific plant populations. The model gives estimates of the slope and intercept of the −3/2 power rule asymptote, the nature of the size–density trajectory, and such features as relative density at crown closure and the effects of soil type or site index. The model is tested by growing red alder (Alnusrubra Bong.) seedlings under greenhouse and lath house conditions at three initial spacings (8 × 8, 4 × 4, and 2 × 2 cm) and two soil types (river loam and alder forest soil) for 525 growth days. There are seven harvests, starting at crown closure. All size–density trajectories tend consistently towards the same single asymptote irrespective of initial spacing, soil type, or age. The asymptote slope and intercept are 1.46 and ca. 94 kg tree−1•m−2. The crown closure line is parallel to the asymptote at a relative density of 4.6 × 10−3. The model also adequately describes the size–density trajectories for 20–50-year-old red pines (Pinusresinosa Ait.) growing at six initial spacings. The asymptote slope and intercept are 1.6 and ca. 87 × 103 m3•tree−1•ha−1, respectively.
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    Application of the pipe model theory to predict canopy leaf area (1982)
    Canadian Science Publishing
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    Publication Date: 1982-09-01
    Description: The pipe model theory presents the idea that a unit weight of tree foliage is serviced by a specific cross-sectional area of conducting sapwood in the crown. Below the crown, a large fraction of the tree bole may be nonconducting tissue, so the sapwood area would have to be known to estimate foliage. We applied the pipe model theory to the analysis of several western coniferous species to learn whether the distribution of canopy leaf area could be accurately estimated from knowledge of the sapwood cross-sectional area at various heights, including breast height (1.37 m). Results are excellent, but taper in the conducting area must be considered when sapwood area is measured below the crown.
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    Trends in the frequency, extent, and severity of spruce budworm outbreaks in eastern Canada (1983)
    Canadian Science Publishing
    Details
    Publication Date: 1983-08-01
    Description: The history of spruce budworm (Choristoneurafumiferana (Clem.)) outbreaks for the past 200 to 300 years, for nine regions in eastern Canada, indicates that outbreaks have occurred more frequently in the 20th century than previously. Regionally, 21 outbreaks took place in the past 80 years compared with 9 in the preceding 100 years. Earlier infestations were restricted to specific regions, but in the 20th century they have coalesced and increased in size, the outbreaks of 1910, 1940, and 1970 having covered 10, 25, and 55 million ha respectively. Reasons for the increase in frequency, extent, and severity of outbreaks appear mostly attributable to changes caused by man, in the forest ecosystem. Clear-cutting of pulpwood stands, fire protection, and use of pesticides against budworm favor fir–spruce stands, rendering the forest more prone to budworm attack. The manner and degree to which each of these practices has altered forest composition is discussed. In the future, most of these practices are expected to continue and their effects could intensify, especially in regions of recent application. Other practices, including large-scale planting of white spruce, could further increase the susceptibility of forest stands. Forest management, aimed at reducing the occurrence of extensive fir–spruce stands, has been advocated as a long-term solution to the budworm problem. The implementation of this measure at a time when man's actions result in the proliferation of fir presents a most serious challenge to forest managers.
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    Input and decay of coarse woody debris in coniferous stands in western Oregon and Washington (1982)
    Canadian Science Publishing
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    Publication Date: 1982-03-01
    Description: At 10 locations in Oregon and Washington, tree mortality resulted in dry-matter transfer of 1.5–4.5 Mg•ha−1•year−1 of boles and branches to the forest floor and 0.3–1.3 Mg•ha−1•year−1 of large-diameter roots directly to the mineral soil. The first value is about the same as that reported for leaf fall in similar stands; the second value generally is smaller than that reported for fine root turnover. Results are based on measurements by the U.S. Forest Service spanning 16–46 years and areas as large as 42 ha. Values based on intervals
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    Responses of Pinusbanksiana and Pinusresinosa seedlings to flooding (1983)
    Canadian Science Publishing
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    Publication Date: 1983-08-01
    Description: Flooding of soil for 45 days severely inhibited growth of 115-day-old Pinusbanksiana Lamb, and P. resinosa Ait. seedlings, with significant effects apparent within 15 days after initiation of flooding. Both species adapted poorly to flooding of soil but P. banksiana was more adversely affected than P. resinosa as shown by earlier and more drastic reduction of growth in the former species. In both species flooding decreased the rate of height growth, production of secondary needles, dry weight increment, and relative growth rates of various plant parts. Root growth of both species was reduced more than shoot growth. The reduction in dry weight increment of root systems of both species reflected arrested branching and elongation of roots as well as decay of roots, mainly the very small nonwoody roots. Flooding slightly stimulated ethylene production by submerged stems.
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  • 54
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    Effect of root zone temperature on ectomycorrhiza and vesicular–arbuscular mycorrhiza formation in disturbed and undisturbed forest soils of southwest Oregon (1983)
    Canadian Science Publishing
    Details
    Publication Date: 1983-08-01
    Description: The presence of ectomycorrhizal and vesicular–arbuscular (VA) mycorrhizal fungi in soils from five sites in a mixed conifer zone in southwest Oregon, each consisting of a 1- to 1.5-year-old clear-cut adjacent to an undisturbed forest stand, was determined by bioassay with Pseudotsugamenziesii (Mirb.) Franco, Pinusponderosa Dougl. ex P. Laws & C. Laws, and Trifoliumsubterraneum L. 'Mt. Barker' as hosts grown at root zone temperatures ranging from 7.5 to 35 °C. Maximum formation of both ectomycorrhizae and VA mycorrhizae occurred at 18.5–24 °C in soils from all sites, and there were no significant qualitative or quantitative differences between disturbed (clear-cut) or undisturbed (forest) soils. Mycorrhiza formation was moderate even at the lowest temperature tested (7.5 °C) but was greatly reduced or prevented at or above 29.5 °C. Treatment of soil at 35 °C for 1 week did not appear to adversely affect viability of ectomycorrhizal fungus propagules, but young mycorrhizae subjected to the same treatment appeared to be severely injured. Thus the ability of native mycorrhizal fungi to grow at low soil temperatures is especially important as they may contribute to the survival of seedlings outplanted into climatic zones characterized by warm, dry summers following cool, wet winters and springs.
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    Winter injury to shoots as it affects root activity in black spruce container seedlings (1984)
    Canadian Science Publishing
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    Publication Date: 1984-02-01
    Description: Reduced levels of root activity were associated with winter injury to shoots of 1-year-old black spruce (Piceamariana (Mill.) B.S.P.) container seedlings.
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    Sap extraction and measurement of soluble sap sugars in sugar maple (1983)
    Canadian Science Publishing
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    Publication Date: 1983-06-01
    Description: Techniques are described for field and laboratory extraction of small quantities of sugar maple (Acersaccharum Marsh.) xylem sap when pressure in the xylem is less than atmospheric. Accurate estimates of sap sugar concentration can be made with a hand refractometer most of the year. There is, however, appreciable within-tree variation in sap sugar concentration at any given time and within short periods of time.
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    Differential response of paper birch provenances to aluminum in solution culture (1980)
    Canadian Science Publishing
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    Publication Date: 1980-03-01
    Description: Progenies belonging to 49 open-pollinated families of paper birch (Betulapapyrifera Marsh.) representing 13 provenances were evaluated sequentially for rate of root elongation in solutions containing only calcium nitrate and solutions containing calcium nitrate + 120 ppm aluminum. Provenances, but not families within provenances, differed significantly in both rate of root elongation and apparent response to Al. Provenance mean tolerance indices (root growth in Al solutions/root growth in non-Al solutions) varied from 0.10 to 0.37. Exposure to 120 ppm Al caused decreased concentrations of Ca and Cu in the foliage, decreased or nearly unchanged concentrations of P and Mg, and increased concentrations of Al, B, and Mn. Compared with the more tolerant provenances, intolerant provenances exhibited generally greater increases in foliar Al concentration after exposure to Al. Differential tolerance to Al will be useful in improving the performance of planted trees on Al-toxic sites.
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    A comparison of methods for total sulphur analysis of tree foliage (1984)
    Canadian Science Publishing
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    Publication Date: 1984-06-01
    Description: Three methods were compared for total sulphur analysis of tree foliage: magnesium nitrate ashing followed by turbidimetry, sodium hypobromite (NaOBr) oxidation followed by colorimetry, and an instrumental method using the Fisher S analyser, model 475. The latter method was found to be substantially better than the other methods with respect to accuracy and speed of analysis, and of satisfactory precision (average coefficient of variation (CV) was 2.5%). Dry ashing resulted in good precision (CV = 1.9%) but only recovered 76% of the reported total S in the United States National Bureau of Standards (NBS) orchard leaf standard. The NaOBr method recovered 88% of reported S from the NBS standard but showed poorer precision (CV = 4.5%). The Fisher analyser had the lowest operating cost per sample, largely owing to lower labour costs.
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    Seasonal changes in energy allocation by white oak (Quercusalba) (1980)
    Canadian Science Publishing
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    Publication Date: 1980-09-01
    Description: Seasonal patterns of change in lipids, sugars, starch, labile (ethanol soluble) constituents, holocellulose, and lignin were studied in six forest-grown white oak (Quercusalba L.) trees. Contents of metabolically active constituents in leaves, twigs, branches, boles (upper and lower), and roots (support and small lateral) were used to construct whole-tree budgets of energy allocation. [14C]Sucrose was also concurrently supplied to the study trees to follow the fate and efficiency of utilization of food reserves. Results showed that white oak rapidly mobilized and replaced food reserves during the critical period of canopy generation in the spring. Starch was more important as a reserve food than lipids or sugar. Large fluctuations in starch in roots in spring and fall suggested a bimodal belowground growth pattern. Labile constituents showed the most pronounced seasonal changes and dominated the calculated whole-tree energy flux patterns. Rapid decline in labile compounds in early spring and a parallel increase in holocellulose suggested a possible pattern of mobilization and resupply of stored reserves associated with in cell wells. This possibility was supported by a concurrent shift of labile 14C to nonlabile 14C in tissues. Canopy generation was calculated to have cost ≤17.7 kg of glucose (1.6 g glucose/g of canopy) of which 13 kg appeared to have come from within the canopy.
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    Biomass and production of an aspen – mixed hardwood – spodosol ecosystem in northern Wisconsin (1981)
    Canadian Science Publishing
    Details
    Publication Date: 1981-03-01
    Description: Total biomass of an aspen – mixed hardwood – spodosol ecosystem in northern Wisconsin, U.S.A., was 197 t/ha and net primary production was 11.5 t/ha per year. Populustremuloides Michx. accounted for 60% of the total biomass and 56% of the annual production and Acersaccharum Marsh, accounted for 25% of the biomass and 28% of the annual production. For all species combined, bole wood was 63% of the total biomass and bole bark was 12%. Bole wood was 33% and bole bark was 7% of the total production. Although crowns accounted for only 15% of the total biomass, they were responsible for 49% of net annual production. Using allometric equations from the literature, root biomass and production were calculated as being approximately 10% of the total biomass and of the annual production. The average rate of total production per unit leaf tissue was 5.7 g production/g leaf tissue for P. tremuloides and 3.7 g/g for A. saccharum.
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    Water chemistry profiles in an early- and a mid-successional forest in coastal British Columbia (1982)
    Canadian Science Publishing
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    Publication Date: 1982-06-01
    Description: Water chemistry profiles of an 18-year-old forest ecosystem are compared with those of a 70- to 90-year-old forest ecosystem for a 9-month period. The younger ecosystem was dominated by Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) and red alder (Alnusrubra Bong.) whereas western hemlock (Tsugaheterophylla (Raf.) Sarg.), Douglas-fir, and western red cedar (Thujaplicata Donn.) dominated the older ecosystem. Concentrations of nutrients and other chemicals were measured in throughfall, forest floor and mineral soil lecachates, saturated-zone water, and stream water. Concentrations of dissolved chemicals were much greater in the younger ecosystem than in the older ecosystem at intermediate stages in the profiles. However, stream water concentrations differed less between the two ecosystems for most of the chemicals investigated. Nitrate and silica were exceptional; stream water nitrate concentrations in the younger ecosystem averaged 16 times greater than those in the older ecosystem. This was probably a result of biological nitrogen fixation by red alder in the younger ecosystem, a process which would more than compensate for the higher nitrate losses. Silica concentrations in the younger ecosystem consistently exceeded levels in the older ecosystem by 40 to 100%. suggesting a possibility of a greater rate of mineral weathering in the younger ecosystem.Although nutrient concentrations were higher in the soil leachates of the younger ecosystem, these higher levels failed to persist through the saturated-zone water and stream water stages of the water chemistry profile. Consequently, the younger ecosystem appeared relatively more efficient at retaining dissolved nutrients than the older ecosystem. Stream water chemistry was relatively insensitive to the magnitudes of the differences in biogeochemical process rates of the two ecosystems.
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    Thigmomorphogenesis: changes in the morphology and chemical composition induced by mechanical perturbation in 6-month-old Pinustaeda seedlings (1981)
    Canadian Science Publishing
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    Publication Date: 1981-06-01
    Description: Seedlings of five half-sibs (seedlings that share a commom maternal parent) of Pinustaeda L. exposed to a bidirectional mechanical perturbation for 6 months exhibited a reduced rate of stem elongation and a reduction in the length of both juvenile leaves and needles. Of the five half-sibs tested, two different anatomical mechanisms of radial enlargement could be identified. Two half-sibs exhibited increased radial growth in the xylem parallel to the direction of the perturbation and no change in the axis perpendicular to the perturbation. Two exhibited a reduction in growth perpendicular to the perturbation with no change in the axis parallel to the perturbation. One half-sib appears to be intermediate between the two other pairs of half-sibs.An overall increase in extractable compounds was observed in the organic solvent fraction of mechanically perturbed seedlings. The amount of lignin appeared to remain fairly constant, and there was no change in the amounts of holocellulose or water extractable compounds.
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  • 63
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    Above- and below-ground net production in 40-year-old Douglas-fir stands on low and high productivity sites (1981)
    Canadian Science Publishing
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    Publication Date: 1981-09-01
    Description: Above- and below-ground net primary production was estimated for 40-year-old Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) stands growing on sites with apparently large differences in productivity potential. Aboveground net production was estimated from direct measurements of tree growth; belowground productivity was derived from data obtained by sorting live and dead roots from soil cores used in combination with measurements of root growth on observation windows.Aboveground net production was 13.7 t•ha−1 on the high productivity site and 7.3 t•ha−1 on the low productivity site. Belowground dry matter production on the high productivity site was 4.1 t•ha−1 compared with 8.1 t•ha−1 for the poorer site. On the more productive site, 8% of total stand dry matter production was in fine roots in contrast to over 36% on the poorer site. The difference in total net production (aboveground plus belowground) between the two sites was small (2.4 t•ha−1). Apparent differences in aboveground productivity may, to a large extent, result from the need for a greater investment in the fine roots on harsher sites.
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    Nitrogen dynamics in the forest floor of interior Alaska black spruce ecosystems (1981)
    Canadian Science Publishing
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    Publication Date: 1981-12-01
    Description: Low addition levels of high enrichment isotope (〉1% of the total nitrogen pool with 99 at.% excess 15N) were used to follow nitrogen movement through selected forest floor components of permafrost-free and permafrost-dominated black spruce ecosystems in subarctic Alaska. The nitrogen pool examined in this study was the total nitrogen pool. 15N was retained most effectively by the feather moss layer (Pleuroziumschreberi (BSG.) Mitt. and Hylocomiumsplendens (Hedw.) BSG.) on both black spruce sites. Twenty-eight months after isotope application the feather moss layer still contained over 90% of the 15N that could be recovered. The limited movement of 15N between feather moss layers and underlying forest floor horizons appeared to be slightly affected by climatological events. Differences in 15N movement patterns between permafrost-free and permafrost-dominated black spruce sites are discussed in terms of precipitation, soil temperature, and biological controls.
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    Modelling probability of root disease center occurrence in northern Idaho forests (1982)
    Canadian Science Publishing
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    Publication Date: 1982-12-01
    Description: A data screening algorithm (SCREEN) identified stand age, average stand diameter, timber type, soil type, aspect, habitat type, and elevation as forest stand or site characteristics strongly associated with root-disease occurrence in northern Idaho forests. The logistic regression model was used to predict root disease center occurrence. A second algorithm (RISK) was used to compute the estimates for the coefficients and to test different prediction equations. On wet aspects, highest probability of root disease centers was found on soils with lowest year-round moisture availability. The reverse was true on dry aspects. Increased slope was associated with increased root disease. Root disease center frequency was inversely related to elevation and directly related to occurrence of Pseudotsugamenziesii (Mirb.) Franco and Abiesgrandis (Dougl.) Lindl. Expression of disease centers was maximum at 60–100 years of stand age on all habitat types. A habitat-type–age interaction was observed in oldest aged stands.
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    The role of Douglas-fir stem sapwood and heartwood in the mechanical and physiological support of crowns and development of stem form (1981)
    Canadian Science Publishing
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    Publication Date: 1981-09-01
    Description: The mechanical and physiological support of a tree's crown is the principal function of its bole. A simple model for Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) of different crown classes explains much of the observed differences in stem form development. Sapwood cross-sectional area at any height on the bole of the tree was found to be related linearly to the amount of foliage above that point; however, in large trees the sapwood area needed to supply transpiring foliage with water is insufficient to provide mechanical support. The combination of sapwood and heartwood was found to provide the stem form that would be expected to ensure uniform resistance to bending by the wind.
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  • 67
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    Tree mortality and radial growth losses caused by the western spruce budworm in a Douglas-fir stand in British Columbia (1982)
    Canadian Science Publishing
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    Publication Date: 1982-12-01
    Description: The effects of defoliation by western spruce budworm (Choristoneuraoccidentalis (Freeman)), on Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) radial growth at breast height and tree mortality are given. Four hundred and twenty trees were marked in an 81-year-old stand, and their defoliation levels were recorded annually from 1970 to 1980 in an outbreak that lasted from 1970 to 1974, inclusive. Forty-one trees were felled and dissected in 1977, 3 years after recovery began. The number of stems per hectare was reduced by 39.3% and basal area by 11.6% through mortality, most occurring among the small diameter, suppressed, and intermediate trees. Relationships were established between mortality and defoliation. Radial increments were examined, and the presence of four outbreaks during the life of the stand was detected. The combined effect of these infestations amounted to a loss of about 12% of the estimated potential diameter had not the insects been active. The most recent outbreak (1970–1974) caused a total of 10 years of subnormal growth, including 5 years due to defoliation and 5 years of recovery. The relationship between radial increment losses and defoliation intensity and duration is studied and quantified.
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    Effects of heavy metals on radicle growth of selected woody species germinated on filter paper, mineral and organic soil substrates (1983)
    Canadian Science Publishing
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    Publication Date: 1983-04-01
    Description: Copper, nickel, and cobalt solutions were added to a variety of substrates to test the effects of these metals on the germination and radicle elongation of two deciduous and five coniferous woody species native to eastern North America. For species grown on filter paper, germination was little affected by metal concentrations of up to 100 ppm. Filter-paper tests showed that radicle elongation was reduced by 25% at concentrations that ranged from 1 to 5 ppm for Betulapapyrifera Marsh, to as much as 50 to 100 ppm for Pinusstrobus L. Concentrations causing similar effects on mineral and organic soil substrates were, respectively, 10 and 100 times greater than those for filter paper. For all species, toxicity followed the pattern Ni 〉 Cu 〉 Co for filter paper and [Formula: see text] for mineral and organic soils. Deciduous species were more readily damaged by these metals than were coniferous species.
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    Stem eccentricity in coastal western hemlock (1981)
    Canadian Science Publishing
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    Publication Date: 1981-09-01
    Description: Stem eccentricity in second-growth western hemlock (Tsugaheterophylla (Raf.) Sarg.) from southern coastal British Columbia appears to be the rule rather than the exception. Although the difference was small, the average eccentricity ratios (ratios of minimum diameter inside bark (DIB) to maximum DIB) for two Lower Mainland sites were significantly larger than those of two Vancouver Island sites. The average eccentricity ratio of all 87 trees studied was 0.929, with a standard deviation of 0.0231. The angular rotation of the major axis of the stem cross section varied greatly, and was positively related to the average stem eccentricity ratio within 5-m log lengths for each stem. Average eccentricity of the whole stem was relatively independent of diameter at breast height (DBH), age, stem height, and eccentricity at breast height. It does not appear that a practical field technique could be devised for the rapid estimation of average stem eccentricity in western hemlock.
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  • 70
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    Vegetative phenology in a clonal seed orchard of Piceaglauca and Piceamariana in northwestern Ontario (1982)
    Canadian Science Publishing
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    Publication Date: 1982-06-01
    Description: The vegetative phenology of Piceaglauca (Moench) Voss and P. mariana (Mill.) B.S.P. was determined in 1979 based on four ramets selected from each of 14 clones of each species located at a seed orchard in northern Ontario. The time of flushing of the leaders and four lateral branches was determined by a qualitative index of bud and shoot development; time of growth cessation was scored as the date at which 95% of shoot growth was complete. The flushing of the vegetative buds of white spruce lasted for a 10-day period compared with only 6 days for black spruce. Although the average date of flushing for white spruce clones was 9 days ahead of the average date for black spruce clones, the latest white spruce clone flushed only 3 days before the earliest black spruce clones. As well, degree-day requirements for flushing were significantly different for clones within each of the two species. These results suggest that the selection of late-flushing white spruce trees for seed orchard stock has the potential to decrease spring frost damage in this species in northern Ontario. Date of budbreak was not correlated with date of growth cessation for either white or black spruce; however, early-flushing clones of black spruce produced significantly greater leader extension than late-flushing clones.
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    Defoliation by spruce budworm: estimation by ocular and shoot-count methods and variability among branches, trees, and stands (1982)
    Canadian Science Publishing
    Details
    Publication Date: 1982-09-01
    Description: Ocular and shoot-count defoliation estimation techniques were compared for accuracy and precision at the levels of branches and crown position within trees, whole trees, plots, and stands. A shoot-count estimate of defoliation for a midcrown branch had the best relative accuracy (±7%), while the best ocular estimate was for the whole tree by an experienced observer (accuracy ±12%). Ocular estimates were biased towards ovcrestimation at low defoliation levels (error 20–30% defoliation), and previous defoliation caused the ovcrestimation of current defoliation by 30–40% on trees that had been previously severely defoliated. Observers were found to be consistent in their rating, but biased by about ±10%; experienced observers were about 5–10% more accurate than inexperienced observers. Intertree variance in defoliation was greater than intratree variance or variance between plots in a stand. It was concluded that ocular estimation of defoliation is a viable technique that can give accuracy within the limits required for surveys and many research applications, if the influence of observer experience, observer bias, and previous defoliation arc recognized, and adjusted for when necessary.
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    The photosynthetic capacity, nutrient content, and nutrient use efficiency of different needle age-classes of black spruce (Piceamariana) found in interior Alaska (1983)
    Canadian Science Publishing
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    Publication Date: 1983-10-01
    Description: The photosynthetic capacity of different needle age-classes of black spruce (Piceamariana (Mill) B.S.P.) was studied using 14C labelling on whole branches at a site near Fairbanks, Alaska. Black spruce had highest photosynthetic rates in the 1-year-old tissue with the four most current age-classes showing similar high rates before declining with age. Older needles were found to maintain 40% of maximum photosynthetic rates after 13 seasons. Highest level of nitrogen was found in current needles with the first eight age-classes maintaining high levels before declining to 70% of maximum values in the oldest needles. Phosphorus levels were much higher in current tissue with a gradual decline after the 1-year-old tissue to a value of 55% of maximum values in the oldest tissue. Nutrient use efficiency was found to be highest in the 1-year-old tissue and declined with needle age. The loss of nutrient use efficiency may be due to the use of older tissue as aboveground nutrient stores, a decline in the efficiency of the photosynthetic apparatus of the needles, or an increase in the leaf specific weight. Black spruce has adapted to the low nutrient availability with low photosynthetic rates and low nutrient contents. Greater longevity of the needles would maximize the photosynthetic return per unit nitrogen invested in the needles.
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    Root-system morphology of common boreal forest trees in Alberta, Canada (1983)
    Canadian Science Publishing
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    Publication Date: 1983-12-01
    Description: Twenty-four specimens of six boreal tree species were excavated: eight Pinusbanksiana Lamb., five Populustremuloides Michx., four Piceaglauca (Moench) Voss, three Piceamariana (Mill.) B.S.P., two Abiesbalsamea (L.) Mills., and two Lara laricina (Du Roi) K. Koch. Root systems were described, and percent biomass determined for above- and below-ground components for half these specimens. Tree ages ranged from 3 to 120 years. Horizontally spreading lateral roots dominated the root systems of all species and occurred within 3– 15 cm of the ground surface. Nutrient and moisture absorption appear to be the principal functions of lateral roots. Maximum vertical root growth occurred near the tree stump as: tap-, heart, sinker, and oblique lateral roots. Vertical root morphology is influenced by site conditions. In addition to providing mechanical support, sinker and taproots may be important adaptations for deep-water utilization on xeric sites. Our data suggest that roots may be important in boreal succession processes through two related mechanisms: (i) nutrient and water deprivation occurring through preemptive growth of tree roots from climax species over roots of serai species, and through interception by mosses; and (ii) niche partitioning occurring below ground between serai and climax, and among climax tree species, by vertical separation of the root systems.
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    The impact of Hurricane David on the forests of Dominica (1983)
    Canadian Science Publishing
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    Publication Date: 1983-04-01
    Description: The impact of Hurricane David on the forests of Dominica was measured 40 days after the hurricane struck the island on August 29, 1979, with winds averaging 92 km/h which lasted 10.2 h. Sixteen 0.1-ha plots were studied. They were located on a variety of slope and exposure conditions, representing three life zones and 11 plant associations. Measurements included tree diameter at breast height (dbh), total height, wood volume, and percent canopy closure of stand. Species and damage conditions were noted. The hurricane caused severe damage, particularly to forests on the southern half of the island. Forty-two percent of the standing timber volume in the study areas was damaged at an average intensity of 27 m3/ha. About 5.1 × I06 timber trees were damaged in an area of 246 km2. "Complex" vegetation was more resistant to hurricane damage than "simpler" vegetation. The climax Dacryodesexcelsa Vahl associations suffered the least hurricane damage, while the palm brake suffered the most damage. Only one species (Richeriagrandis Vahl) exhibited significantly higher hurricane damage. Trees in larger diameter classes tended to uproot with more frequency than smaller diameter trees, which tended to snap and break. Regrowth of seedlings and saplings was rapid on wet areas of the damaged sites. We found more species on regenerating plots than on the undisturbed forest plots. The damage caused by Hurricane David is the most extensive reported to date anywhere, and damage to vegetation by hurricanes appears to be more extensive than damage by earthquakes and landslides. Owing to their high frequencies in the Caribbean, hurricanes induce cyclic plant successions.
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    Modeling methods for a two-state system with continuous responses (1983)
    Canadian Science Publishing
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    Publication Date: 1983-12-01
    Description: A probabilistic two-step method of analysis is described that overcomes the problems associated with using a single model to analyze data drawn from a two-state system. The two steps of the analysis are (i) to determine the probability that an observation with given characteristics falls in each of the two states of the system and (ii) to estimate the response of the dependent variable in each of the two states as a function of characteristics of observations. Estimating cull volume in standing trees provides an example. This analysis results in two component models that more closely describe the process of interest than is possible with any single model. Statistically sound approximations to confidence intervals and tests of hypotheses for the parameters of each of the component models may be computed.
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  • 76
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    Use of diameter increment and basal area increment in tree growth studies (1980)
    Canadian Science Publishing
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    Publication Date: 1980-03-01
    Description: Growth of diameter of individual trees can be expressed as diameter increment or basal area increment. Little work has been done to determine which of these parameters is preferable for use in growth studies. This paper examines growth of trees in pure and mixed stands of even-aged, regrowth forest of Eucalyptusregnans, E. obliqua, and E. globulus, aged 6-80 years, thinned and unthinned, in southeastern Tasmania. Weighted least squares regression equations are developed to relate diameter and basal area increments, over 1- to 6-year increment periods, to initial tree diameter in 29 growth plots. The correlation between basal area increment and initial diameter was always greater than that between diameter increment and initial diameter in these relationships. Despite this, the precision of estimates of future diameter in each plot is shown to be the same whether diameter or basal area increment equations are used. Data from a thinning experiment in 38- to 85-year-old, even-aged Acersaccharum, Fraxinusamericana, and Prunusserotina stands in southern Ontario are also examined and similar results obtained. It is concluded that no apriori reason exists for expressing growth as diameter increment or basal area increment in studies of these types.
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    Effects of thinning and urea fertilization on the distribution of area increment along the boles of Douglas-fir at Shawnigan Lake, British Columbia (1984)
    Canadian Science Publishing
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    Publication Date: 1984-12-01
    Description: The effects of fertilization and thinning of Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) on the distribution of area increment along the bole were assessed using radial growth measurements 6 and 9 years after treatment. Within treatments, the average area increment per tree was linearly related to diameter at breast height, and this relationship was used to evaluate the effects of treatment on growth rate. Fertilization had the greatest effect on average area increment, and for a particular fertilization regime, thinning increased the response. Thinning modified the distribution of growth over the bole of all trees and increased butt flare, especially in smaller trees. The effect declined from the 4- to 6-year measurement period to the 7-to 9-year measurement period. Fertilization had no consistent effect on growth distribution. The regression methods used in this study provided a more sensitive measure of form changes than previous methods, were independent of size distribution, and facilitated extrapolations and evaluation of temporal trend.
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    Organic matter and nitrogen content of the forest floor in even-aged northern hardwoods (1984)
    Canadian Science Publishing
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    Publication Date: 1984-12-01
    Description: Organic content of the forest floor decreases for several years after clear-cutting, and then slowly recovers. Thickness, bulk density, organic matter, and nitrogen content of forest floors were measured for 13 northern hardwood stands in the White Mountains of New Hampshire. Stands ranged from 1 to about 100 years in age. Forest-floor thickness varied significantly with stand age, but bulk density, organic fraction, and nitrogen fraction were independent of age. Total organic content of the forest floor agreed very well with data from Covington's (W. W. Covington 1981. Ecology, 62: 41–48) study of the same area. Both studies indicated that mature forest floors have about 80 Mg organic matter•ha−1 and 1.9 Mg nitrogen•ha−1. Within 10 or 15 years after cutting, the organic matter content of the floor decreases to 50 Mg•ha−1, and its nitrogen content to 1.1 Mg•ha−1. The question whether the decrease is rapid and the minimum broad and flat, or if the decrease is gradual and the minimum sharp, cannot be answered. The subsequent increase to levels reached in mature forest requires about 50 years. Some of the initial decrease in organic matter and nitrogen content of the forest floor may be caused by organic decomposition and nitrogen leaching, but mechanical and chemical mixing of floor into mineral soil, during and after the harvest operation, may also be important. The difference is vital with respect to maintenance of long-term productivity.
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    Nutrient cycling in relation to decomposition and organic-matter quality in taiga ecosystems (1983)
    Canadian Science Publishing
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    Publication Date: 1983-10-01
    Description: A variety of evergreen and deciduous forests in the taiga of interior Alaska were studied over a 5-year period to examine how the chemical quality of forest-floor organic matter affected its rate of decomposition and mineral cycling within and outside the tree vegetation. Litterbag and respiration studies were used to monitor decomposition. Natural forest-floor substrates and others altered by addition of N, P, and K fertilizer and glucose as a carbon source were studied in the laboratory and field for rates of weight loss and O2 consumption. Forest floors differing in C/N ratios, including those deficient in N, were used to measure substrate quality influences on seedling growth, nutrient content, and tannin content. Microbial (bacteria and fungi) biomass was measured across a range of forest types along with pH, base saturation total pool sizes of N and P, and annual mineralization of organic matter per square metre. Under identical moisture and temperature conditions average respiration rates in evergreen forest-floor L, F, and H substrates were 1.8, 2.8, and 2.0 times less than in the corresponding deciduous forest horizons, respectively. Birch L and F horizons had respiration rates 11.5 times higher than the corresponding black spruce layers. Weight losses in birch L, F, and H horizons were 6, 3, and 2 times higher, respectively, than in the corresponding black spruce substrates. Substrates had a quality-dependent decay rate which did not change when they were relocated within or between sites indicating that measured field climatic differences were not as influential on decay rates as substrate quality components. Fungal biomass was significantly correlated with the quantity of organic matter in all sites (n = 15, r = 0.62) but correlations were better for deciduous (n = 9, r = 0.89), and evergreen (n = 6, r = 0.82) forests separately. Strong correlations exist also between grams of organic matter decayed per square metre per year and fungal biomass (n = 13, r = 0.86), and fungal biomass and grams of N and P mineralized per square metre per year (n = 14, r = 0.95) and (n = 11, r = 0.94, respectively). Seedlings on mineral-deficient substrates produced more tannins than the controls, and seedlings on substrates with widening C/N ratios had successively less tissue with lower N content, and proportionally more roots. Nitrogen content of litter fall in increasingly nitrogen-poor forest floors was correspondingly lower. Nitrogen content of litter fall on N rich forest floors and N fertilized forest floors was proportionately higher. Nitrogen withdrawal in leaves at senescence was inversely correlated with grams N mineralized per square metre per year in forest floors. Fertilization did not influence microbial processes in the field, though lab studies indicated a negative influence of NH4, P, and K on microbial respiration. Glucose added in the laboratory and field markedly increased forest-floor microbial respiration. In vitro glucose-induced increases in respiration were not influenced by addition of ammonium nitrate and were significantly depressed by addition of P and K. In the field, fertilization had no effect on either glucose-induced respiration or microbial biomass.
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  • 80
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    Low-site class black spruce and jack pine nutrient removals after full-tree and tree-length logging (1983)
    Canadian Science Publishing
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    Publication Date: 1983-12-01
    Description: An old, merchantable, low-site class black spruce (Piceamariana (Mill.) B.S.P.) stand growing on a Lithic Humo-Ferric Podzol overlying a granite bedrock, and a younger but merchantable low-site class jack pine (Pinusbanksiana Lamb.) stand growing on a Ferro-Humic Podzol overlying a deep coarse sand near Baie Comeau, P.Q., were analysed for stand biomass and macronutrient contents of both stand and soil. The magnitude of the depletions of macronutrients from the site, in full-tree and tree-length methods of logging, are compared with their available and total quantities in the soil. The range of values from the literature for nutrient inputs are presented and discussed in relation to logging losses. The results suggest that full-tree logging in the dry jack pine stand could cause a severe loss of potentially mineralizable N supply; P, K, and Mg deficiency problems owing to export are not apparent, but a Ca balance problem is apparent. The implication is that full-tree logging should be avoided on such sites.
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  • 81
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    Photosynthate allocation in Pinustaeda. III. Photosynthate economy: its production, consumption and balance in shoots during the growing season (1980)
    Canadian Science Publishing
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    Publication Date: 1980-09-01
    Description: Using data on CO2 exchange, growth, and biochemical composition, an approach was developed to calculate the seasonal production, consumption, and surplus of photosynthate in shoots of loblolly pine (Pinustaeda L.). The amounts of CO2 released and of glucose substrate required in biosynthesis of shoot biomass over the growing season were also calculated. Individual growth flushes of different age-classes, as well as of an entire 1-year-old branch unit, ofPinustaeda were used as bases for calculations.Substrate requirements and CO2 production were relatively constant throughout the growing season. Within the whole 1-year-old branch unit, 63% of the photosynthate production was supplied by the two growth flushes of the previous year. Growth of the current year's shoot represented the major consumption of photosynthate, and this made up 66% of the total photosynthate consumed in the branch unit. Surplus of photosynthate, which would be available for translocation from the branch, was about 38% of the total photosynthate produced. Most of the photosynthate surplus was derived from the growth flushes of the previous year. Source and sink relationships, with regard to photosynthate partitioning in the 1-year-old branch unit over the growing season, were clarified and described.
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  • 82
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    The effects of experimental fires on black spruce forest floors in interior Alaska (1983)
    Canadian Science Publishing
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    Publication Date: 1983-10-01
    Description: Seven units (about 2 ha each) of black spruce – feather moss forest were experimentally burned over a range of fuel moisture conditions during the summer of 1978. Surface woody fuels were sparse and the principal carrier fuel was the forest floor (largely mosses and their decomposition products). Forest floors after burning comprised a small-scale mosaic of unburned, scorched, lightly burned, moderately burned, and heavily burned (organic materials entirely consumed) conditions. Percentage of the unit area in the moderately and heavily burned condition ranged from 11.2 to 77.2% and percent decrease in forest-floor thickness varied from 27.4 to 63.1% in the seven units. Forest-floor consumption was most closely correlated with the moisture content of lower moss (01 horizon) and lower duff layers (022 horizon) at the time of burning. For the first 3 years after fire, biomass production was greater on heavily burned than on lightly burned sites (58 vs. 37 g/m2 on an annual basis). Heavily burned sites were completely dominated by the invading species Epilobiumangustifolium L., Ceratodonpurpureus (Hedw.) Brid., and Marchantiapolymorpha L., whereas lightly burned plots were occupied by sprouting species such as Calamagrostiscanadensis (Michx.) Beauv., Vacciniumuliginosum L., and Ledumgroenlandicum Oeder. Soil pH and amounts of total P and available P in the forest floor increased significantly as a result of burning; and in all cases, increases reached a maximum in moderately and heavily burned areas. Total N in the forest floor increased significantly in moderately burned, but decreased slightly in heavily burned areas. Total N and total P showed smaller increases in the surface mineral soil as a result of burning. Supplies of available P in the mineral soil increased almost 4-fold in moderately burned and over 16-fold in heavily burned areas.
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  • 83
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    Ten-year growth and nutrition effects of a straw treatment and of repeated fertilization on jack pine (1984)
    Canadian Science Publishing
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    Publication Date: 1984-06-01
    Description: Straw was added over snow to smother ground vegetation (straw experiment) in sample plots in a 45-year-old jack pine (Pinusbanksiana Lamb.) stand in Quebec. Sample plots in the same stand were fertilized six times with N, P, and K in a 10-year period to maintain four foliar N regimes (optimum nutrition experiment). Smothering of ground vegetation with straw improved N nutrition and produced a sustained increase in tree growth. Sustained growth increases were obtained by repeated applications of 56 kg N/ha associated with 1.4% N foliar concentrations in current foliage. Gross volume increments of about 3 m3 • ha−1 • year−1 were sustained with these low applications. Repeated heavy N applications killed trees and reduced growth. Repeated additions of P and K with N did not produce appreciable differences in response from additions of N alone. Increment cores showed the annual development in growth as increasing over most of the 10-year period for low repeated N additions, and as increased and stable over the same period for the straw addition.
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  • 84
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    Water deficits and root growth of ectomycorrhizal white oak seedlings (1980)
    Canadian Science Publishing
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    Publication Date: 1980-12-01
    Description: White oak (Quercusalba L.) seedlings grown in a silt loam soil inoculated with Pisolithustinctorius (Pers.) Coker and Couch exhibited 80% ectomycorrhizal development after a 6-month establishment period whereas the noninoculated controls exhibited less than 5%.When water was withheld and soil water potential decreased as the soil dried, xylem pressure potential and leaf conductance of both the inoculated and noninoculated seedlings declined gradually. At the peak of the drying cycle, the inoculated seedlings exhibited mean prelight and midlight xylem pressure potential values which were 0.2 MPa and 0.15 MPa, respectively, more negative than the noninoculated seedlings. Although the inoculated seedlings had a mean leaf surface area 1.5 times larger than that of the noninoculated seedlings, there were no significant differences in leaf conductance at the peak of the dehydration cycle. Mean rates of root elongation were greater among the inoculated seedlings during the drying cycle. Following reirrigation of the soil, the inoculated seedlings yielded significantly less negative values of prelight and midlight xylem pressure potential and greater leaf conductance when compared to the noninoculated seedlings.
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  • 85
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    Xylem nitrogen as a possible diagnostic nitrogen test for loblolly pine (1983)
    Canadian Science Publishing
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    Publication Date: 1983-04-01
    Description: Radial stem wood sections of fertilized (at age 14 years) and unfertilized loblolly pine (Pinustaecla L.) trees were analyzed 5 and 9 years after treatment to establish if xylem nitrogen (N) can be used for a diagnostic nitrogen test. The percentage of xylem nitrogen in wood formed since fertilization was greater in fertilized than in unfertilized trees. The 2 years of wood growth near the cambium had a higher percent N than older wood, but differences between treatments were less pronounced than in older wood. Concentrations of N for fertilized and unfertilized trees were nearly constant for 2- to 9-year-old wood indicating that a sampling technique to determine the N status of loblolly pine could be developed by increment coring.
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  • 86
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    Comparing biomass regressions by site and stand age for red maple (1983)
    Canadian Science Publishing
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    Publication Date: 1983-04-01
    Description: Allometric regressions for estimating red maple (Acerrubrum L.) biomass did not differ by stand age and site index. Significant differences were found only in terms of error variance, not in terms of regression slope or intercept. These trends suggest a single predictive model is valid for regional estimates. More attention should be given to regional sampling procedures and predictive relations that are valid for a wide range of stand and site conditions in developing weight tables and conducting biomass inventories.
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  • 87
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    Application method and timing of gibberellin A4/7 treatments for increasing pollen conebud production in southern pines (1984)
    Canadian Science Publishing
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    Publication Date: 1984-02-01
    Description: In 4 different years' experiments with loblolly (Pinustaeda L.), slash (Pinuselliottiielliottii Engelm.), and longleaf (Pinuspalustris Mill.) pine, timing of gibberellin A4/7 (GA4/7) treatments was critical for optimal promotion of pollen conebuds. Two or three biweekly treatments given at strategic times were equivalent to six given from May to August. July to August applications best promoted pollen conebuds. Using the cationic surfactant Aromox C/12, aqueous foliar sprays of 200 mg/L of GA4/7 were more effective than ethanolic topical bud treatments for pollen conebud induction in slash pine. Addition of naphthaleneacetic acid enhanced the GA4/7 effect in loblolly pine but diminished it in slash and longleaf pine.
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  • 88
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    Estimating probability of intertree root contact in second-growth Douglas-fir (1982)
    Canadian Science Publishing
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    Publication Date: 1982-09-01
    Description: The relationships of root attributes and tree, stand, and site factors to root contact between second-growth Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) were studied in excavated root systems. Type 1 contacts (tenuous) were positively related to root length and inversely related to root volume. Type 2–3 contacts (with slight to severe root deformation) were positively related to number of roots. Type 4 contacts (apparent grafts) were positively related to root number and cross-sectional area. Differentiation among groups containing no contacts. Type 1 contacts only or all contact types showed that intertree distance, tree diameter, rooting depth, soil gravel content, and percent slope were significant in determining probability of root contact.
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  • 89
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    Litter decomposition and nutrient release in Douglas-fir, red alder, western hemlock, and Pacific silver fir ecosystems in western Washington (1980)
    Canadian Science Publishing
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    Publication Date: 1980-09-01
    Description: Decomposition rates and changes in the nutrient content of needle and leaf litter were examined in Douglas-fir (Pseudotsugamenziesii Mirb. Franco), western hemlock (Tsugaheterophylla (Raf.) Sarg.), Pacific silver fir (Abiesamabilis (Dougl.) Forbes), and red alder (Alnusrubra Bong.) ecosystems in western Washington, U.S.A. Nylon litterbags (1-mm mesh) were placed in the stands in November and December 1974. Bags were collected after 3, 6, 12, and 24 months and weighed, except in the Pacific silver fir stand when bags were collected after 6, 9, 14, and 24 months. Litter was analyzed for C, N, P, K, Ca, Mg, Mn, lignin, and cellulose. Decomposition constants (k values) were determined. Fastest decomposition after 2 years occurred in red alder leaves, followed by Douglas-fir, western hemlock, and Pacific silver fir needles. There were significant differences in weight loss among species after 1 year, but no significant differences were evident after 2 years. Red alder leaves showed rapid weight loss in the 1st year but decomposed little in the 2nd year. Decomposition constants were highly positively correlated with minimum air temperatures and negatively correlated with C:N ratios. Low litter moisture tended to reduce decomposition in summer, particularly in the Pacific silver fir stand. Decomposition proceeded under snow in this ecosystem. The pattern of loss of elements from litterbags after 2 years varied from ecosystem to ecosystem, particularly for N. The following element mobility series resulted for the four ecosystems: red alder (K 〉 Mg 〉 Ca 〉 P 〉 N 〉 Mn), Douglas-fir (K 〉 P 〉 Ca 〉 Mg 〉 Mn 〉 N), western hemlock (K 〉 Ca 〉 Mg 〉 N 〉 Mn 〉 P), and Pacific silver fir (K 〉 Mg 〉 Ca 〉 Mn 〉 P 〉 N).
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  • 90
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    Root and shoot biomass and mycorrhizal development of white spruce seedlings naturally regenerating in interior Alaskan floodplain communities (1984)
    Canadian Science Publishing
    Details
    Publication Date: 1984-08-01
    Description: Root and shoot biomass and mycorrhizal development were examined for white spruce (Piceaglauca (Moench) Voss) seedlings naturally regenerating in four floodplain communities in the boreal forest. Mean seedling biomass was highest in the open community and lowest in the spruce community. Seedlings growing in the open community had higher root:shoot ratios (0.50) compared with seedlings growing in the willow (0.34), alder (0.20), and spruce (0.24) communities. Essentially all short roots of spruce seedlings growing in all four communities were infected by mycorrhizal fungi throughout the growing season.
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  • 91
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    An evaluation of growth response of young, spaced balsam fir to 3 years of spruce budworm spraying with Bacillusthuringiensis (1984)
    Canadian Science Publishing
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    Publication Date: 1984-06-01
    Description: Growth response of young, spaced balsam fir (Abiesbalsamea (L.) Mill.) to 3 successive years (1979–1981) of treatment with Bacillusthuringiensis Berliner for spruce budworm (Choristoneurafumiferana (Clem.)) control was examined in 20 plots on the Cape Breton Highlands, Nova Scotia. Defoliation commenced in 1976, 3 years before control operations began. Five plots were established both inside and outside the spray block, in areas that had been severely defoliated by budworm and in areas moderately defoliated. All plots in the severely defoliated area suffered heavy tree mortality, but mortality was significantly lower in the protected plots. In contrast, the moderately defoliated plots suffered virtually no tree mortality. The average volume increment of stem-analyzed trees from 1979 to 1981 was 0.63 dm3/tree for protected and 0.43 dm3/tree for unprotected trees in the severely defoliated area versus 4.15 dm3/tree for protected and 3.08 dm3/tree for unprotected trees in the moderately defoliated area. These volume increment values are equivalent to 8.8 m3/ha of growth between 1979 and 1981 for protected plots in the moderately defoliated area, compared with 6.1 m3/ha for unprotected plots. Therefore, a total gain of 2.7 m3/ha can be attributed to the 3 years of B. thuringiensis spraying. Long-term growth responses toB. thuringiensis spraying were not evaluated. Better results would be expected had protection started at the beginning of the budworm outbreak, instead of after 3 years of severe defoliation.
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  • 92
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    A dynamic model of growth in defoliated fir stands (1981)
    Canadian Science Publishing
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    Publication Date: 1981-06-01
    Description: Constructing a dynamic model of growth in fir stands (age 30–70 years), based on gross physiological structure of the stand, made possible reasonable qualitative and quantitative forecasts of growth loss due to defoliation by insects in a wide variety of situations. Analysis of the model, in comparison with the natural world, indicates that the key to understanding growth loss in fir stands subjected to defoliation by spruce budworm lies in more explicit knowledge of the mechanisms of new foliage production.
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  • 93
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    Influence of seed size on germination and early development of loblolly pine (Pinustaeda L.) germinants (1983)
    Canadian Science Publishing
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    Publication Date: 1983-02-01
    Description: Seed size was examined as a possible explanation for variation in the size of containerized loblolly pine (Pinustaeda L.) seedlings. Under laboratory conditions of minimal environmental stress, larger seed were found to germinate more quickly and produce a larger germinant after 28 days of growth. In a similar experiment conducted under greenhouse growing conditions, large seed produced the largest seedlings. Size differences among seedlings in both experiments resulted from differences in the rate of germination unique to each seed size class. Consequently, seedling size and possibly uniformity of growth were considered to be a function of germination patterns which were strongly influenced by seed size and weight.
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  • 94
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    Thinning and nitrogen fertilization effects on sapwood development and relationships of foliage quantity to sapwood area and basal area in Douglas-fir (1983)
    Canadian Science Publishing
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    Publication Date: 1983-06-01
    Description: A 24-year-old Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) stand was treated with various levels and combinations of nitrogen fertilization and thinning. Over a period of 5–9 years after treatments, trees were sampled to determine effects on foliage quantity and sapwood characteristics at different stem heights together with their relationships. Sapwood width remained relatively constant up the stem where heartwood was present, but the number of annual rings it contained decreased with height. The sapwood width at breast height (bh) increased with stem diameter; treatments had little effect on percent sapwood at bh. The ratio of foliage mass to sapwood cross-sectional area changed for different portions of the crown and was lower when based on sapwood area at bh than at base of live crown. Significant linear relationships of foliage mass and area to sapwood area at bh were found, but relationships of foliage to basal area (bh) were just as close for all treatments; treatments significantly affected these relationships with control trees having the lowest regression slopes.
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  • 95
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    Contribution of mycorrhizae and soil fungi to nutrient cycling in a Douglas-fir ecosystem (1983)
    Canadian Science Publishing
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    Publication Date: 1983-04-01
    Description: The allocation of biomass and nutrients (N, P, K, Ca, Mg) was measured from August 1976 to September 1978 in a young, second-growth Douglas-fir (Pseudotsugamenziesii (Mirb.) Franco) stand in the Oregon Coast Range. Tree biomass comprised 78–79% of the total standing crop of organic matter with the remainder allocated as follows: soil organic matter, 17%; forest floor, 4%; and fungi, 2%. Bole biomass accounted for 64–66% of the total tree standing crop; the remainder was apportioned among: nonmycorrhizal roots, 17–18%; branches, 7–8%; mycorrhizae, 6%; and foliage, 4%. Nutrient stocks in aboveground tree components exceeded those in belowground components by one to nine times. For all nutrients except Ca, roots and mycorrhizae contained larger stocks than either the forest floor or fungi; amounts of Ca in the forest floor and in fungi were twice those in roots and mycorrhizae. Return of organic matter to the soil by fine roots and mycorrhizae ranged from 84 to 78% of total tree return. About 73% of total net primary production was invested in growth and maintenance of roots and mycorrhizae. Return of N, P, and K to the soil by mycorrhizae comprised 83–87% of total tree return and 25–51% of Ca and Mg return. Return by mycorrhizae of N, P, and K was four to five times greater than that of roots, nearly equal for Ca, and three times less for Mg.
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  • 96
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    Growth and acetylene reduction of black alder seedlings in response to water stress (1984)
    Canadian Science Publishing
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    Publication Date: 1984-08-01
    Description: Black alder, Alnusglutinosa (L.) Gaertn., seedlings were grown and kept well watered for 10 weeks, and then subjected to moisture stress conditioning for 5 subsequent weeks, where one-half of the seedlings were watered only when visibly wilted. The remaining seedlings (controls) were kept well watered. Moisture stress conditioning greatly reduced shoot, root, nodule, and total plant dry weight. The root–shoot ratio (grams/grams) of seedlings was significantly increased from 0.28 in the control seedlings to 0.33 in the water-stressed treatment. Acetylene reduction rates decreased only slightly in the range of water potentials between −0.50 and −1.29 MPa, then dropped rapidly below water potentials of −1.30 MPa. Moisture stress conditioning had no significant influence on this response. Although not significantly different, leaf and nodule osmotic potentials were consistently lower in the water-stressed plants.
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  • 97
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    Conducting sapwood area, foliage area, and permeability in mature trees of Piceasitchensis and Pinuscontorta (1984)
    Canadian Science Publishing
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    Publication Date: 1984-12-01
    Description: The relationships between foliage area and sapwood area between trees and within the crowns of 20 Piceasitchensis (Bong.) Carr., provenance Queen Charlotte Island, British Columbia (10 in a control plot and 10 in a plot fertilized with potassium and phosphorus 8 years before harvest) and 10 Pinuscontorta Dougl., provenance Ladysmith trees were examined using a physiological analysis based on Darcy's law. Foliage area index on the fertilized P. sitchensis plot was higher than on the control. The variation of foliage area density with depth in the canopies followed a normal distribution. Relationships between foliage area and sapwood basal area were linear but the slopes were different for the two species. There was no significant difference between the control and fertilized P. sitchensis trees. The relationship between foliage area and the product of sapwood area and permeability was linear and data from the three plots fell on the same line. Sapwood area, permeability, and their product decreased with depth through the crowns of the trees. Within the crowns, relationships between cumulative foliage area and sapwood area, and between cumulative foliage area and the product of sapwood area × permeability were different with species and treatment. A single linear relationship resulted when the product of cumulative foliage area above an internode × the internode length was plotted against sapwood area × permeability for the internode. This suggests that it is the drop in potential across a node and internode rather than the gradient of potential across the internode that is related to the flux of water through tree crowns. The data support the hypothesis that the relationship between foliage area and sapwood area depends on permeability of the sapwood and the local climate through its influence on transpiration rate, particularly via average water vapour pressure deficit of the air and stomatal conductance.
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    Rooting depths and successional development of selected boreal forest communities (1983)
    Canadian Science Publishing
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    Publication Date: 1983-08-01
    Description: The root density and depth patterns of four boreal forest age sequences were analyzed for successional trends. Rooting depths increased with age on sandy substrates which supported aspen (Populustremuloides Michx.) and jack pine (Pinusbanksiana Lamb.) communities. Rooting depth did not change in an aspen series on fine-textured substrates or in a black spruce (Piceamariana (Mill.) BSP) series growing on organic substrates. Plant communities growing on mineral soils showed a decrease in near-surface root densities and understory vascular plant cover with increasing age. Maximum rooting was deepest on sandy substrates and shallowest on organic deposits. Roots in all stands were concentrated near the ground surface. In most cases 50% of all roots were located within 15 cm of the forest floor. Root densities in this zone ranged from 11 000 to 30 000 roots m−2 of vertical surface. Densities were approximately 4300 roots m−2 for the overall rooting zone.
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  • 99
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    Mass, nutrient content, and decay rate of dead boles in rain forests of Olympic National Park (1982)
    Canadian Science Publishing
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    Publication Date: 1982-09-01
    Description: Analysis of dead boles of Piceasitchensis (Bong.) Carr. and Tsugaheterophylla (Raf.) Sarg. in open- and closed-canopy forests of the Olympic Peninsula Washington, U.S.A., revealed that hemlock mortality in both forest types was due mainly to windthrow, whereas spruce typically died upright. The open forest contained 120 t/ha of dead bole wood; the closed forest contained 161 t/ha. Hemlock boles decayed more rapidly than the larger spruce boles, although both showed considerable variability. On a per-hectare basis, 146–223 kg of N, 147–197 kg of Ca. 39–61 kg of K, 18–29 kg of Mg, 6–14 kg of Na, and 17–29 kg of P were contained in dead boles of the open- and closed-canopy forests, respectively. Except for N and Mg, the nutrient concentrations of the wood were not significantly different after 33–68 years of bole decay. The N:P ratios increased with increasing decay for both species.
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  • 100
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    Generalized biomass equations for jack and red pine in the Lake States (1982)
    Canadian Science Publishing
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    Publication Date: 1982-12-01
    Description: The biomass of 76 jack pine (Pinusbanksiana Lamb.) trees (29 stands) and 72 red pine (P. resinosa Ait.) trees (28 stands) from throughout the northern Lake States was determined. All trees were from even-aged, unthinned plantations ranging from 20–61 years old; site indexes represented nearly the complete range for these species. Individual tree component weights (foliage, live branches, dead branches, stem wood, and stem bark) were regressed against dbh and tree height using the nonlinear form Bt = aDbHc. Stand biomass was also estimated with stand basal area and mean height of dominant and codominant trees using the equation form Bs = a + b(B) + c(Hs) or a + b(B)(Hs). The equations were tested in two additional stands of red pine and two of jack pine and by comparison with literature values. Individual tree equations were most accurate for estimating bole components and the total tree and less accurate for foliage and branches. The standard error of the estimate divided by mean weight ranged from 0.06 to 0.17 for bole components, from 0.21 to 0.28 for live crown components, and from 0.43 to 0.49 for dead branches. For all components, jack pine equations were slightly less precise than those for red pine. The individual tree equations appear to be applicable over a wide geographical area and usable for both natural stands and plantations. The equations appear to be valid for the majority of unthinned stands in the age range of 20–50 years. The stand equations, while less precise than individual tree estimates, should give reasonably accurate estimates of stand biomass components in most situations.
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