ALBERT

Description: The biology of the chokker squid Loligo vulgaris reynaudii on inshore grounds in the South-East Cape was studied by examination of trends in jig catches, length frequency analyses, length/weight relationships, analyses of maturity stages and SCUBA diving transects in a spawning area. Commercial catches probably reflected the influx of squid into shallow waters to spawn. Modal length at spawning was between 265 and 305 mm mantle length (ML) in males and between 175 and 195 mm ML in females. There was no modal progression to indicate growth, nearly all squid were mature, a percentage of males were spent, the level of feeding on the grounds was very low, and mantle walls were thinner than those of squid offshore. These factors all indicate that the squid population inshore had reached the end of its life cycle and was in the spawning phase. The sex ratio was biased towards males, an indication either of differential inshore migration or of greater longevity in males than in females. The frequency of occurrence of trawled egg capsules was highest in summer and all eggs were between 18 and 25 m deep. The preferred substratum for spawning appeared to be low-relief reef interspersed with coarse sand, and the stalks of egg capsules were always embedded in the sand to form individual clusters, as in most other loliginids. No evidence was found of post-spawning mortality in the areas examined.

Description: It is well documented that animals take risk of predation into account when making decisions about how to behave in particular situations, often trading-off risk against opportunities for mating or acquiring energy. Such an ability implies that animals have reliable information about the risk of predation at a given place and time. Chemosensory cues are an important source of such information. They reliably reveal the presence of predators (or their presence in the immediate past) and may also provide information on predator activity level and diet. In certain circumstances (e.g., in the dark, for animals in hiding) they may be the only cues available. Although a vast literature exists on the responses of prey to predator chemosensory cues (or odours), these studies are widely scattered, from marine biology to biological control, and not well known or appreciated by behavioural ecologists. In this paper, we provide an exhaustive review of this literature, primarily in tabular form. We highlight some of the more representative examples in the text, and discuss some ecological and evolutionary aspects of the use of chemosensory information for prey decision making. Curiously, only one example illustrates the ability of birds to detect predator odours and we have found no examples for terrestrial insects, suggesting a fruitful area for future study.

Description: Oogenesis in four commercial Caribbean sponge species, Hippospongia lachne, Spongia barbara, S. cheiris and S. graminea, was studied using light and transmission electron microscopy. Eggs and embryos develop asynchronously in localized endosomal nurseries of these viviparous and gonochoristic species. Statistical analyses of specific morphological characteristics of reproductive elements have unequivocally identified four specific stages in the process of oogenesis. Oogonia undergo mitotic division to produce primary oocytes. Meiotic division occurs producing secondary oocytes which are fertilized before zygotes undergo major growth by phagocytosis and the transfer of nutrients through cytoplasmic bridges. During cleavage of the zygote, umbilici form between embryos and nurse cell layers and these function in the transfer of symbiotic bacteria and other mesohyl substances from the maternal parent to the embryo. These symbionts were observed dispersed between blastomeres of all young and maturing embryos and between internal cells of cytodifferentiated parenchymella larvae. Extracellular transfer of symbiotic bacteria from maternal tissues to developing embryos has not been reported in any other viviparous invertebrate.

Description: Before 1985, Martialia hyadesi (Cephalopoda: Ommastrephidae) in the Pacific Ocean was known only from the Eltanin Fracture Zone and Macquarie Island. A joint Japan‐New Zealand squid survey around New Zealand captured many immature ommastrephid squids. Gel electrophoresis confirmed the presence of immature M. hyadesi. Aspects of the external morphology are described. The distinctive tentacle club was evident in the smallest specimen examined, 19 mm dorsal mantle length (ML). Arm trabeculae were first evident in specimens of 40–50 mm ML. Immature squid were distributed around and southward of the Subtropical Convergence Zone. The presence of very small squid (〈 10 mm ML) indicated spawning on or near the Auckland Island Shelf.

Description: The beaks of 9,994 cephalopods of 61 species, obtained mainly from chick regurgitations of wandering albatrosses (Diomedea exulans L.) at Gough, Auckland, Antipodes, Prince Edward and Macquarie Islands and South Georgia, were used to specify and calculate the biomass of cephalopods consumed. Histioteuthidae were most important by numbers and biomass at Gough Island (in warmest seas), but Onycboteuthidae increasingly superseded them southwards; Kondakovia longimana formed 59 to 75% of biomass eaten at the three localities nearest the Antarctic Polar Front. Other important families were Octopoteuthidae, Cranchiidae, Architeuthidae (juveniles) and Ommastrephidae (South Georgia only). Most frequently eaten were Histioteuthis atlantica 13.7%, Galiteuthis glacialis 12.4%, H. eltaninae 12.0% and Kondakovia longimana 11.6%. Wandering albatrosses rearing chicks can forage at least to 3,000 km in a single foray, and may exploit an important food source about 1200 km from the nest (as in the probable commensalism of South Georgian birds with the Falkland Islands fishery). They feed, sometimes opportunistically, on cephalopods active or moribund at the surface, or discarded or lost by trawlers, cetaceans or seals. Vertically migrating cephalopods, especially bioluminescent species, are disproportionately frequent in their non-commensal diet, suggesting that they often feed at night.

Description: A link is proposed between the processes that led to the evolution of large species of squid and the highly variable, cyclic recruitment seen in squid fisheries. Maximum growth requires maximal feeding and minimal routine metabolism at optimum temperatures, which decrease as squid grow. Topographically induced upwelling zones, inshore of western boundary currents, provide productive environments with appropriate temperatures for all life stages. Most squid are small and live in the tropics or subtropics; locomotor constraints prevent them from swimming long distances. Long annual migrations to spawn upstream in current systems require short-lived squids to maximize rates of growth. Therefore, such systems provide the opportunity and a powerful selective advantage for large size and rapid growth. Increased fecundity and cannibalism provide additional directional selection for large individuals. Current systems show food production peaks (blooms); paralarval release must match these to increase survival. Because squid are semelparous, disruption of delicately balanced lifecycles by physical events can virtually annihilate stocks. Recovery probably requires that populations of large squid "re-evolve" from smaller, more-stable tropical populations of small squid. This recovery phase may extend the "down-side" of abundance cycles. Studies of squid/current systems have focused on western boundary currents, but the Illex complex also associates with eastern boundaries. Such populations are generally smaller than in larger systems, supporting the hypothesis, but more detailed comparisons are required.

Description: During a cruise in March 1988 dedicated to investigation of the marine resources of South Africa's continental slope, 62 species in 22 families of Cephalopoda were collected from the Cape Canyon and Cape Point Valley. Multivariate analysis revealed a clear distinction between cephalopods of the upper and lower continental slope in both benthic and epibenthic habitats. Todaropsis eblanae and Todarodes angolensis were indicator species for the upper slope benthic, from 300 to 500 m, but on the lower slope, in 700–900 m of water, they were replaced by Histioteuthis miranda and Opisthoteuthis agassizii. In the epibenthic, both upper and lower slopes were dominated by Abraliopsis gilchristi and Lycoteuthis ?diadema, but other species characteristic of the lower slope were the oceanic species Mastigoteuthis hjorti, Ctenopteryx sicula and Taonius sp. A. Cranchia scabra indicated the presence of oceanic water at stations 700–900 m deep. Other species of significance in the catches were Todarodes filippovae, Histioteuthis macrohista, Rossia enigmatica and Bathypolypus valdiviae. Species affinities indicate that the cephalopod fauna of the southern African continental slope includes the following zoogeographic components: southern African endemic, circum-Subantarctic species associated with Antarctic Intermediate Water, circum-global southern tropical/subtropical, tropical Indo-Pacific and cosmopolitan tropical/subtropical.

Description: Literature on trophic relationships in the Benguela ecosystem has stressed the importance of cephalopods as prey of groundfish. The groundfish community of the shelf and upper slope of southern Africa is dominated by the Cape hakes, and the results presented (1984–1991) confirm that both species of hake are important predators of cephalopods, especially taking into consideration the abundance of hake in the ecosystem. However, geographic, seasonal and species variability are evident in the patterns observed. The main prey species are Sepia spp. (predominantly Sepia australis), Loligo vulgaris reynaudii, Todaropsis eblanae and Lycoteuthis ?diadema. The last-named is an important food organism for fish. Its systematic status needs revision, however. Qualitative results of studies of cephalopod predation are also provided for kingklip and monkfish.

Description: Cephalopods of importance in the Benguela ecosystem include Loligo vulgaris reynaudii, Todarodes angolensis, Todaropsis eblanae, Lycoteuthis ?diadema, Sepia australis, Octopus spp. (up to three species) and Argonauta spp., and possibly also Ocythoe tuberculata and Rossia enigmatica. Species which may prove important as a result of further research are Lolliguncula mercatoris, Ommastrephes bartramii, Todarodes filippovae, Histioteuthis miranda and Abraliopsis gilchristi. "Importance" is defined on the basis of "survey abundance" (including commercial fisheries) and their trophic links with other organisms. Use of the latter criterion indicates that Sepia australis, Todaropsis eblanae and Lycoteuthis ?diadema are sufficiently abundant to be exploited by fisheries. Unknown factors are dispersal, availability and market considerations. The only examples of cephalopods feeding on commercial species of fish are Loligo v. reynaudii feeding on anchovy Engraulis capensis and Cape hakes Merluccius capensis and/or M. paradoxus in the southern Benguela and Todarodes angolensis preying on Cape hake in the northern Benguela. Such feeding is opportunistic and is not believed to threaten the fish stocks. Predators of cephalopods are mostly opportunistic, switching to other prey when cephalopods are not available. There is no evidence that such predators pose a threat to the Loligo fisheries. The opportunistic nature of cephalopods as prey and predators makes quantification of predation (in both directions) difficult. Data for such quantification are, as yet, unavailable.

Description: The present study contributes new information on the cephalopods off Namibia, contains the first record of Ornithoteuthis volatilis (Sasaki, 1915) in the Atlantic, and adds records of six species in the Benguela Current and three species in Namibian waters. The presence of certain species seldom encountered in the Benguela Current has been confirmed. A compilation of the cephalopod fauna off Namibia had also been included, listing 65 species. Additional morphological data on Stoloteuthis leucoptera, Lycoteuthis lorigera, Architeuthis sp., Pholidoteuthis boschmai, Ornithoteuthis volatilis, Eledone nigra, and Graneledone sp. have been provided. The status of the genus Lycoteuthis has been reviewed in the light of the first collection of Lycoteuthis lorigera (Steenstrup, 1875) males in the Atlantic, and Lycoteuthis diadema (Chun, 1900) has been considered to be a synonym for Lycoteuthis lorigera

Description: The results of ichthyoplankton surveys carried out by the Instituto Nacional de Pesca (INAPE) in the Argentine–Uruguayan Common Fishing Zone (AUCFZ) in summer 1980 and the winters of 1980–1982 are presented. In addition, the results of joint research with INIDEP, the Argentine and Japan Fisheries Agency, on larvae, juveniles and adults of the short-finned squid Illex argentinus carried out in winter 1989 are given, as are data obtained during the joint sardine and anchovy recruitment project carried out by R.V. Meteor in November/December 1989. The short-finned squid Illex argentinus is the most important cephalopod resource of the area, and an extended fishery is carried out on the Patagonian shelf and in the proximity of the Falkland Islands. The fishing season in the AUCFZ, for pre-spawning and spawning animals, extends from early autumn to winter (March–August). Abundance of rhynchoteuthion larvae (417–485 larvae·10 m−2) was greatest in winter in surface temperatures of 12,1–16,9°C and surface salinities of 34,8 – 35,2 × 10−3. The distribution of the larvae is related to the western boundary of the Brazil Current and the convergence front.

Description: The question whether the chokka squid Loligo vulgaris reynaudii resource can be managed effectively is examined in the light of developments in the fishery and knowledge of the resource gathered in recent years. The history of the fishery since its inception in 1985, management controls and the current state of knowledge of stock identity, distribution, seasonality and abundance, life cycle and population dynamics are reviewed as a background to a discussion of management alternatives. Long-term measures, such as fleet limitation, seasonal closures and de facto closed areas and size limits, all appropriate in the early stages of a fishery when knowledge is limited, should be replaced by more-flexible alternatives as knowledge improves. Methods of stock assessment, stock-recruitment studies and further basic biological analyses are recognized as being crucial to improving management methods. An explanation embracing physical oceanographic features and plankton productivity in the vicinity of the spawning grounds is advanced for the mechanisms underlying hatchling survival. The possible contribution of trophic studies to squid management is recognized. Effective management of the chokka squid resource is concluded to be possible provided that the specific areas needing attention be addressed by means of goal-orientated research. Rational, but not necessarily optimal, management decisions can, however, be made even in the absence of stock-recruitment data, by the employment of common-sense measures which generally include some form of effort control.

Description: Biomineralized structures and tissues are composites, containing a biologically produced organic matrix and nano- or microscale amorphous or crystalline minerals. Two main examples of organic matrices – the amino-polysaccharide chitin and the asymmetric protein collagen – are presented and discussed as the basic structural modules and organo-templates for calcium and silica biomineralization in nature. Both serve as templates, providing preferential sites for nucleation and controlling the location and orientation of mineral phases. Here, for the first time, chitin and collagen are analysed from evolutionary, structural, and functional points of view with respect to their templating properties in calcification and silicification phenomena, using both in vivo and in vitro data. It is proposed that these biopolymers be characterized as fundamental templates in biomineralization, inasmuch as they are very ancient from an evolutionary point of view, common to many species and biological systems with a global distribution. The two polymers also exhibit very similar hierarchical structural organizations, in spite of the possible alternatives they provide in chemical nature and origin. In addition, the phenomenon of multi-phase mineralization – where two minerals, amorphous and crystalline CaCO3, form from one biomolecule, chitin – is also described, analysed, and discussed for the first time.

Description: Despite coelacanths, Latimeria chalumnae, being listed as either endangered by CITES or critically endangered by the IUCN, their population size within South Africa is unknown and still needs to be estimated. Their conservation status unfortunately excludes the use of conventional tagging to mark individual animals for a possible mark–recapture experiment. This study shows that because coelacanths have a unique spot patterning it is possible to quickly and accurately identify specific individuals photographically using computer-aided identification software. Without any manual intervention by an operator, the software accurately identified between 56 and 92% of the individuals. Indentification success increased to 100% if the operator could also manually select from other potential matching photographs. It was also shown that fish exhibiting a yaw angle not exceeding 60° could be accurately identified in photographs, although the percentage of fish correctly identified without operator-intervention decreased rapidly with increasing yaw angle. Computer-aided identification should therefore facilitate future coelacanth research as it is both efficient and accurate while also reducing potential stress on the animals observed.

Description: During the years 1989–1993 an intensive collection of fishes from the aphotic zone (below 150 m) of the northern part of the Gulf of Aqaba was conducted. This survey recorded 69 fish species, 8 elasmobranchs, and 61 teleosts, belonging to 45 families. Fifteen species are endemic to the Red Sea: Mustelus mosis, Narcine bentuviai, Rhinobatos punctifer, Ophichthus echeloides, Rhynchoconger sp., Physiculus marisrubri, Ostichthys hypsipterygion sufensis, Pterygotrigla sp., Uranoscopus marisrubri, Parascolopsis sp.1 and sp. 2, Atrobucca geniae, Chromis pelloura, Samariscus sp., Thamnaconus modestoides erythraeensis. Eleven species are new records for the Red Sea: Gymnothorax johnsoni, Rhynchoconger sp., Synodus doaki, Pterygotrigla sp., Chelidoperca pleurospilus, Carangoides equula, Parascolopsis sp. 1 and sp. 2, Bodianus leucostictus, Paracaesio sordidus, and Samariscus sp. Two species, Cociella crocodilo and Parascolopsis eriomma, are first substantiated records for the Red Sea. None of the species recorded in this list is considered conventional deep-sea fishes. The ichthyofauna of the aphotic zone of the Gulf of Aqaba is composed of species of shallower origin.

Description: A new image of the French continental crust between Brabant (Belgium) and the Basque province of Spain is presented on the basis of considerable recent geological and geophysical information as well as the compilation and reInterprétation of previously available data. The resulting section, which shows the main basement structures to a depth of 45 km, also is the first nonspeculative image of the westernmost part of the Variscan orogen. The French Global Geoscience Transect reveals a complete picture of this orogen between its remnant root and the surface. The divergent thrusts are bounded on the north and in the south by the old Brabant and Ebro-Aquitaine cratons, respectively; these thrusts also involve two previous plate boundaries. The lower part of the orogen is limited by a layered lower crust, probably of Permian age. Near the surface the Hercynian orogen is buried—near the northern end of the transect by the Paris Basin, which can be considered an eastward extension of the English Channel, and in the south by the South Armorican continental margin, which makes a transition between the oceanic crust of the Bay of Biscay and the axis of the Variscan orogen. In this area, the deep Parentis graben is located at the site of pronounced crustal thinning, since only 7 km of Hercynian crust are now preserved.

Description: A new compound, jolynamine (1), was isolated from the marine brown alga Jolyna laminarioides collected from the coast of Karachi, Pakistan. In addition, four known compounds, namely saringosterol (2), loliolide (3), methyl-4-hydroxybenzoate (4) and propyl-4-hydroxybenzoate (5), were isolated for the first time from the marine brown alga Iyengaria stellata, and two known compounds, namely 3,4,5-trimethylaniline (6) and harmine (7), were isolated for the first time from the marine brown alga Melanothamnus afaqhusainii. Compound 6 is synthetically known but was isolated for the first time from a natural source. The structures of these compounds were elucidated with the help of powerful spectroscopic techniques. Furthermore, the methanolic extracts of both algae showed anti-microbial activities against various bacteria and fungi.

Description: The holoplanktonic family Miraciidae (Copepoda, Harpacticoida) is revised and a key to the four monotypic genera presented. Amended diagnoses are given for Miracia Dana, Oculosetella Dahl and Macrosetella A. Scott, based on complete redescriptions of their respective type species M. efferata Dana, 1849, O. gracilis (Dana, 1849) and M. gracilis (Dana, 1847). A fourth genus Distioculus gen. nov. is proposed to accommodate Miracia minor T. Scott, 1894. The occurrence of two size-morphs of M. gracilis in the Red Sea is discussed, and reliable distribution records of the problematic O. gracilis are compiled. The first nauplius of M. gracilis is described in detail and changes in the structure of the antennule, P2 endopod and caudal ramus during copepodid development are illustrated. Phylogenetic analysis revealed that Miracia is closest to the miraciid ancestor and placed Oculosetella-Macrosetella at the terminal branch of the cladogram. Various aspects of miraciid biology are reviewed, including reproduction, postembryonic development, vertical and geographical distribution, bioluminescence, photoreception and their association with filamentous Cyanobacteria (Trichodesmium).

Description: In this paper, we empirically investigate the robustness of random forests for regression problems. We also investigate the performance of six variations of the original random forest method, all aimed at improving robustness. These variations are based on three main ideas: (1) robustify the aggregation method, (2) robustify the splitting criterion and (3) taking a robust transformation of the response. More precisely, with the first idea, we use the median (or weighted median), instead of the mean, to combine the predictions from the individual trees. With the second idea, we use least-absolute deviations from the median, instead of least-squares, as splitting criterion. With the third idea, we build the trees using the ranks of the response instead of the original values. The competing methods are compared via a simulation study with artificial data using two different types of contaminations and also with 13 real data sets. Our results show that all three ideas improve the robustness of the original random forest algorithm. However, a robust aggregation of the individual trees is generally more profitable than a robust splitting criterion.

Description: The annual winter sardine run along the South African east coast impacts the KwaZulu-Natal (KZN) coastal system in a variety of ways. These include ecological impacts, such as enrichment of a largely oligotrophic environment, competition between migrant sardine Sardinops sagax, other migrant and resident small pelagic fish species, and interactions with predators, as well as the socio-economic impacts of the sardine run on the local people. Enrichment of KZN coastal waters with organic nitrogen contained within the sardine is compared with alternative sources of nitrogen such as upwelling, river, sewage and stormwater runoff, and groundwater discharge. The sardine run appears to contribute most nitrogen to this system—96 000 t compared to 500–3 300 t for each of the other significant sources at trophic level 2, although upwelling estimates are extremely wide. Nonetheless, the majority of surviving sardine, their young and predators return southwards, suggesting that the nett export of nitrogen to KZN waters during the run is likely to be of a similar order of magnitude as that from other sources. Further, whereas the sardine supply of nitrogen is exclusively during winter, the bulk of the riverine input is in summer, thus ensuring that nitrogen supply in the region is maintained at fairly constant levels throughout the year. Competition for food between small pelagic fish is minimised by resource partitioning, but further dietary data are needed for resident species. Although interactions between sardine and top predators must exist, further studies are needed to confirm links between top predator life cycles and the sardine run. The estimated value of sardine as a tourist spectacle is compared to that from a seasonal beach-seine or boat-based purse-seine fishery for this species. Whereas the estimated value of the sardine as a tourist attraction appears substantially higher than could be derived from catching them, the small-scale beach-seine fishery itself draws tourists and also provides limited, seasonal employment opportunities.

Description: Our understanding of the fundamental regulatory roles that tyrosine phosphatases play within cells has advanced significantly in the last two decades. Out-dated ideas that tyrosine phosphatases acts solely as the “off” switch counterbalancing the action of tyrosine kinases has proved to be flawed. PTP1B is the most characterized of all the tyrosine phosphatases and it acts as a critical negative and positive regulator of numerous signaling cascades. PTP1B’s direct regulation of the insulin and the leptin receptors makes it an ideal therapeutic target for type II diabetes and obesity. Moreover, the last decade has also seen several reports establishing PTP1B as key player in cancer serving as both tumor suppressor and tumor promoter depending on the cellular context. Despite many key advances in these fields one largely ignored area is what role PTP1B may play in the modulation of immune signaling. The important recognition that PTP1B is a major negative regulator of Janus kinase – signal transducer and activator of transcription (JAK-STAT) signaling throughout evolution places it as a key link between metabolic diseases and inflammation, as well as a unique regulator between immune response and cancer. This review looks at the emergence of PTP1B through evolution, and then explore at the cell and systemic levels how it is controlled physiologically. The second half of the review will focus on the role(s) PTP1B can play in disease and in particular its involvement in metabolic syndromes and cancer. Finally we will briefly examine several novel directions in the development of PTP1B pharmacological inhibitors.

Description: Sexual reproductive cycles of a Florida, U.S.A., population of four Caribbean commercial sponge species, Hippospongia lachne, Spongia barbara, S. cheiris and S. graminea, were determined by analysis of tissue samples collected over a three-year period. Spermatogenesis in these species was studied using light and transmission electron microscopy. The production of male gametes occurs in cysts within the endosomal tissue of mature specimens. Reproductive elements within an individual cyst develop synchronously while development between cysts is asynchronous. All available evidence suggests that these species are dioecious. Spermatogonia differentiate directly from choanocytes in situ. All cells of the chamber lose their collars and flagella and undergo mitosis to produce primary spermatocytes, each possessing a single flagellum. The ratio of nucleus to cell diameter in these cells is almost double that of choanocytes. Circumstantial evidence suggests that primary spermatocytes undergo meiosis to produce four spermatids, but confirmational chromatid linkage figures are still lacking. The mature spermatozoa lack both intermediate segments and acrosomes. Male gametes displayed a bright yellow-white autofluorescence when excited with blue light (460–485 nm).

Description: Species distribution models (SDMs) are an important tool in biogeography and ecology and are widely used for both fundamental and applied research purposes. SDMs require spatially explicit information about species occurrence and environmental covariates to produce a set of rules that identify and scale the environmental space where the species was observed and that can further be used to predict the suitability of a site for the species. More spatially accurate data are increasingly available, and the number of publications on the influence of spatial inaccuracies on the performance of modelling procedures is growing exponentially. Three main sources of uncertainty are associated with the three elements of a predictive function: the dependent variable, the explanatory variables and the algorithm or function used to relate these two variables. In this study, we review how spatial uncertainties influence model accuracy and we propose some methodological issues in the application of SDMs with regard to the modelling of fundamental and realized niches of species. We distinguish two cases suitable for different types of spatial data accuracy. For modelling the realized distribution of a species, particularly for management and conservation purposes, we suggest using only accurate species occurrence data and large sample sizes. Appropriate data filtering and examination of the spatial autocorrelation in predictors should be a routine procedure to minimize the possible influence of positional uncertainty in species occurrence data. However, if the data are sparse, models of the potential distribution of species can be created using a relatively small sample size, and this can provide a generalized indication of the main regional drivers of the distribution patterns. By this means, field surveys can be targeted to discover unknown populations and species in poorly surveyed regions in order to improve the robustness of the data for later modelling of the realized distributions. Based on this review, we conclude that (1) with data that are currently available, studies performed at a resolution of 1–100 km2 are useful for hypothesizing about the environmental conditions that limit the distribution of a species and (2) incorporating coarse resolution species occurrence data in a model, despite an increase in sample size, lowers model performance.

Description: Squid on their spawning grounds feed mainly at night when they are more dispersed. In all, 28,5 per cent of squid sampled at night had food in their stomachs, whereas only 6,7 per cent of those collected by day had food. Most stomachs contained only a single prey species (90,8% of those analysed). Teleosts dominated the prey of squid collected at night (58%M), followed by crustaceans (25%), polychaetes (9%) and cephalopods (3%). By day the prey was dominated by cephalopods (61%), followed by teleosts (20%), crustaceans (14%) and polychaetes (2%). Bregmaceros sp. was the most frequently identified teleost, Loligo vulgaris reynaudii (cannibalism) the dominant cephalopod, ?Betaeus sp. (Alpheidae; pieces of coral were also found) the commonest crustacean and Nereis sp. the commonest polychaete. There were seasonal differences in the diet too: squid caught during summer seemed to have similar proportions of the four main prey components. Also, the incidence of feeding was higher than in winter. There were, however, no significant differences in stomach mass expressed as a percentage of body mass between day and night nor between season nor between sexes. The average stomach mass of all samples was 0,6 per cent of body mass, less than on the feeding grounds, where it is generally about 2 per cent.

Description: The results of ichthyoplankton surveys carried out by the Instituto Nacional de Pesca (INAPE) in the Argentine–Uruguayan Common Fishing Zone (AUCFZ) in summer 1980 and the winters of 1980–1982 are presented. In addition, the results of joint research with INIDEP, the Argentine and Japan Fisheries Agency, on larvae, juveniles and adults of the short-finned squid Illex argentinus carried out in winter 1989 are given, as are data obtained during the joint sardine and anchovy recruitment project carried out by R.V. Meteor in November/December 1989. The short-finned squid Illex argentinus is the most important cephalopod resource of the area, and an extended fishery is carried out on the Patagonian shelf and in the proximity of the Falkland Islands. The fishing season in the AUCFZ, for pre-spawning and spawning animals, extends from early autumn to winter (March–August). Abundance of rhynchoteuthion larvae (417–485 larvae·10 m−2) was greatest in winter in surface temperatures of 12,1–16,9°C and surface salinities of 34,8 – 35,2 × 10−3. The distribution of the larvae is related to the western boundary of the Brazil Current and the convergence front.

Description: The population size and breeding success of Emperor Penguins Aptenodytes forsteri at the Auster and Taylor Glacier colonies were estimated during the 1988 breeding season. At Auster a total of 10 963 pairs produced about 6350 fledglings for a breeding success of 58%. At Taylor Glacier about 2900 pairs raised 1774 fledglings for a breeding success of 61%. Fledglings left Taylor Glacier over a period of 33 days at a mean mass of 10.56 kg.

Description: A model is presented which tests the representation of the maturity process in terms of gonadosomatic indices (GSI) in chokka squid Loligo vulgaris reynaudii. It assumes that the true maturation process is reflected by the results of histological investigation, which cannot be used in large-scale ecological work in the field. However, the maturity scales used in ecological studies define some morphological categories which can be linked directly to microscopic development. Therefore, the overlap of GSI ranges for each morphological maturity category may be used to judge how well the GSIs represent the histological stages. Results have shown that the overlap is large and that GSI cannot be recommended as adequately reflecting the maturation process in squid. A morphological scale of maturity with possible broad applications in exploited families of squid is proposed as a better representation of the maturation process than GSI.

Description: Morphological differences between paralarvae of two loliginid squid species common in southern African waters (Loligo vulgaris reynaudii and Lolliguncula mercatoris) are described. The differences are: Loligo — "cheek patches" consisting of four dark chromatophores, nine large dark dorsal chromatophores on the mantle, tentacular clubs broad and much wider than tentacle stalks, proximal row of three club suckers with others tetraserial, suckers large enough to appear crowded on the club surface; Lolliguncula — "cheek patches" with three dark chromatophores, two pairs of" large, dark dorsal chromatophores on the mantle, tentacular clubs narrow, proximal club suckers arranged in three pairs, suckers small, not particularly crowded. Relationships with other myopsids are briefly discussed.

Description: Cereopsis studeri was described by G. von Koch in 1891 with material from Naples. However, it was subsequently synonymized, erroneously identified, and overlooked in subsequent soft coral literature of the twentieth century. After the original description, this species was not recorded or correctly described for 120 years. The study of newly collected material from the North Western Mediterranean permits the re-description of this forgotten species and its assignation to the genus Nidalia in the family Nidaliidae. The main features of Nidalia studeri com. nov. are: colony torch-like, a capitulum light orange in colour, not laterally flattened, dome-shaped and not distinctly projecting beyond the stalk, introvert with sclerites transversally placed in two longitudinal rows per interseptal space, anthocodial crown with 28–38 sclerite rows, points separated from polyps distally, formed by 6–9 pairs of sclerites, and the presence of intermediate points (secondary points) between principal (interseptal) ones. Nidalia studeri is here compared with its closest congeners, especially with the Indonesian species N. simpsoni, species from the West Indian Region N. dissidens, N.occidentalis, N. deichmannae, and the recently described Nidalia aurantia from the Mid-Atlantic Ocean. This is the first time that the genus Nidalia and the family Nidaliidae have been reported with certainty for the Mediterranean Sea.

Description: The changes in global temperatures as a result of carbon dioxide (CO2) emissions has suggested that cumulative CO2 emissions will continue to increase over time. Many countries are looking for ways to reduce or alter the amount of CO2 harming our environment; therefore, this review is a compilation of CO2 adsorption on biomass-derived-biochar (BDB). This suggests that effective measures to mitigate the risk of dangerous climate change will need to limit cumulative emissions of CO2. Further, if cumulative CO2 emissions overshoot acceptable limits, it will become necessary to remove CO2 from the air, that is, the so-called “negative emissions.” In this review, we discuss the definitions and classes of technologies for capturing CO2 from the air and the application of biochar in the improvement of soil fertility. We also discuss the economic tradeoff between biochar and bio-oil, agricultural nutrient leaching, the novel magnetic property of biochar and its durability.

Description: Three new compounds, 4′-(4,5-dimethyl-1,3-dioxolan-2-yl)methyl-phenol (1), (3′-hydroxybutan-2′-yl)5-oxopyrrolidine-2-carboxylate (2), and atroviridetide (3), have been isolated from the marine-derived fungus Trichoderma atroviride G 20-12. Their structures were determined on the basis of chemical and spectroscopic methods.

Description: This paper presents an idea on the possible structuring effect of hex actinellids on Antarctic sponge associations. To this end, information derived from underwater photography performed on the eastern Weddell Sea shelf is reported and original trawl data are presented. Underwater photography shows the existence of different sponge associations; species poor associations are connected to soft bottom, species rich associations exist on substrates characterized by bryozoan debris and especially sponge spicule mats. The trawl. catches show differences in the population structure of a hexactinellid sponge, Rassella racovitzae Topsent at two stations, distinguishable from each other by substrate structure. On average small and therefore probably young specimens were found on bryozoan debris, while a population with larger and probably older specimens was found on solid hexactinellid spicule mats. These observations form the basis for the hypothesis that hexactinellid sponges are a major biological structuring agent for Antarctic sponge associations; they colonize soft substrate and bryozoan debris dominated areas and subsequently change the quality of the substrate by spicule deposition. The ensuing spicule mats are a suitable settling ground for a large number of demosponge species dependent on hard substrates. Mass occurrences of hexactinellids are also found in areas other than Antarctica. The phenomenon recognized in the Weddell Sea probably occurs more widely spread.

Description: A method is proposed for cloud detection over sea using a single infrared channel of a high spatial resolution satellite radiometer. The method combines a spatial coherence test and an absolute threshold test for the temperature field. The threshold for the second test is automatically determined by a histogram analysis of data which were preselected by the coherence test. The coherence test used differs from the classical standard deviation test in the way of the test value computation: the weight of the pixel to be investigated is increased. A simulation shows that under conditions of low cloud cover this makes the proposed coherence test more sensitive than the standard deviation test. When applied to real data the test was also found to be very sensitive compared with visible and IR threshold tests. Cloud cover obtained by the whole method is finally compared with that resulting from the visible and IR histogram analysis procedure of Phulpin et al. This comparison indicates a high reliability of the proposed method.

Description: Tests on the effects of two herbivore groups (littorinid snails and gammarid amphipods), on algal succession in high intertidal tidepools dominated by Fucus distichus showed that the grazer groups exert different grazing pressures on the algae. The differences can be related to the feeding morphologies ofthe two grazer guilds. The scraping, microphagous littorinid snails prevent the establishment of both micro- and rnacroalgae at the microscopic level. The biting, macrophagous gammarid amphipods are ineffective at grazing microalgae and prostrate macroalgae from the substratum, but exert a considerable influence on the erect macroalgae which escape littorinid grazing. Despite differences in feeding mechanisms, the magnitude of the effect of the two grazer groups on the canopy cover of macroalgae is similar.

Description: It is well known that random forests reduce the variance of the regression predictors compared to a single tree, while leaving the bias unchanged. In many situations, the dominating component in the risk turns out to be the squared bias, which leads to the necessity of bias correction. In this paper, random forests are used to estimate the regression function. Five different methods for estimating bias are proposed and discussed. Simulated and real data are used to study the performance of these methods. Our proposed methods are significantly effective in reducing bias in regression context.

Description: A histological study of the reproductive cycle of male and female shore crabs, Carcinus maenas (Linnaeus), was performed monthly on the South West coast of Ireland (from December 2006 to July 2008). The calculated sex ratio deviated from equality, 1:0.53, revealing a strong male bias. A system was devised, based on screening of tissue sections, to describe and stage gametogenic development. Histological examinations revealed that ovarian development occurred biannually, with a primary winter cycle in which the larger crabs reproduced and a secondary summer cycle, when smaller crabs reproduced. An association was observed where more of the larger specimens were caught in the summer months and the smaller specimens in the winter months, which inversely correlated with the segregated breeding cycles. There was strong evidence that mature male crabs could potentially copulate year round since all mature specimens, collected throughout the year, contained viable spermatozoa. Developmental stages of oogenesis and spermatogenesis were described to develop a practical gonadal index for this portunid crab, providing information on the biology of this species, which will be of benefit for fisheries management.

Description: The enoploteuthid cephalopod Abraliopsis lineata is re-described and its generic position discussed. Specimens for the present study were captured during the Indian Ocean Expedition of RV Meteor in 1987, where the species occurred in considerable numbers. The geographical distribution of A. lineata is described and discussed. The detailed analysis of the photophore pattern of the present specimens differs from the original description. The diagnostic features in the male, especially the structure of the hectocotylus which separates A. lineata easily from the members of the subgenus Pfefferiteuthis, are outlined. The morphological differences which separate A. lineata from A. gilchristi, the only other member of the subgenus Micrabralia, are summarized.

Description: The diets of 20 species of smaller Odontoceti were investigated. The material was collected along the southern African coast between 1966 and 1990 and included 158 strandings, 29 animals killed incidentally and 49 animals caught under permit. In total, 57 species in 34 families of fish and 89 species in 24 families of cephalopods were identified from remains in the 236 stomachs investigated. Most Odontoceti fed on commercially unexploited cephalopods and fish, or on fish below commercially utilized sizes. However, the average sizes of anchovy and pilchard eaten by Delphinus delphis and Lagenorhynchus obscurus were larger than the sizes most frequently taken commercially. The species composition of the prey items reflected the onshore-offshore distribution (and possibly the foraging depths) of different Odontoceti. Tursiops truncatus and Cephalorhynchus heavisidii were closest to shore and D. delphis and L. obscurus over the continental shelf. The rest were distributed around the shelf-edge and just off the edge. A comparison of the stomach contents of stranded and non-stranded D. delphis, L. obscurus and C. heavisidii demonstrated that results from stranded animals are biased.

Description: The stomach contents of 723 Loligo vulgaris and 440 Loligo forbesi caught in the northwestern Spanish Atlantic waters have been examined. The diets of both species are described and compared. Loligo vulgaris shows 28 different types of prey belonging to four groups (Teleostei, Crustacea, Cephalopoda and Polychaeta) and Loligo forbesi 27 different types of prey belonging to three groups (Teleostei, Crustacea and Cephalopoda). Both species catch similar prey species but in different proportions. Cannibalism was observed in both species. Estimated prey sizes were smaller than squid sizes. No differences in feeding habits of males and females of both species were observed, but females seem to increase food intake during maturation. No significant changes were found in the diet of Loligo vulgaris within the size (DML) range studied (65–465 mm). Importance of cephalopods increased and importance of fish decreased in the diet of Loligo forbesi with growth (65–685 mm). Diet and food intake varied with seasons in both species. Diets of both squids were significantly different. Los contenidos estomacales de 723 Loligo vulgaris y 440 Loligo forbesi capturados en aguas de Galicia (Noroeste de España) fueron examinados. Se describe y compara la dieta de ambas especies. Se identificaron 28 tipos de presa diferentes en Loligo vulgaris que pertenecen a cuatro grupos (Teleostei, Crustacea, Cephalopoda y Polychaeta); y 27 tipos de presa en Loligo forbesi, pertenecientes a tres grupos (Teleostei, Crustacea y Cephalopoda). Ambas especies comen pres as similares, pero en proporciones diferentes. En ambas especies se observó canibalismo. La talla de las presas fue menor que la de los calamares. No se encontraron diferencias en la dieta entre machos y hembras en ambas especies, pero se observó que las hembras incrementan su tasa de ingestión durante la maduración. No se hallaron cambios significativos en la dieta de Loligo vulgaris en función de la talla (DML) dentro del rango de tamanos estudiado (65–465 mm). En Loligo forbesi, los cefalópodos aumentaron y los peces disminuyeron en importancia con la talla (65–685 mm DML). La dieta y la tasta de ingestión de ambas especies varió con la época del ano. Las dietas de ambas especies fueron significativemente diferentes entre sí.

Description: Introduction: Nanocarriers are considered to be one of the most innovative drug delivery systems, owing to their high potential in drug protection, delivery and targeting to the diseased site. Unfortunately, their applicability is hampered mainly by their uptake, due to macrophagic recognition and lack of specificity, if not properly engineered. Areas covered: Sialic acid (SA) and its derivatives have recently been studied in order to govern their stealthness as carriers and their effectiveness as targeting moieties. In this review, the most outstanding research (in vitro and in vivo) dealing with the use of SA or its derivatives to modify the surface carriers, in order to achieve targeted or stealth nanosystems, is summarized. Moreover, the application of SA or its derivatives as modifiers in cancer targeting and therapy, and in recognition purposes, is considered. Expert opinion: The application of SA-based strategies for nanocarrier engineering represents one of the most stimulating challenges in drug delivery and drug targeting. Both in vivo and in vitro results on stealth or targeted nanocarriers, modified with different kinds of SA or SA derivative, have highlighted the great potential of this approach. These studies have drawn attention to both the advantages (stealth properties, targeting ability, cancer inhibition, viral and inflammation recognition, brain targeting) and the possible disadvantages (i.e., presence of possible multi-target side effect outputs) of this strategy, and overall suggests that further investigations on this strategy are required.

Description: There has been debate in the literature about whether jellyfish abundance has increased in the northern Benguela upwelling system, or not, over the past five decades and what impact they are having on pelagic fish. Here we review old expedition literature as well as more recent spatial and temporal patterns in distribution of jellyfish off Namibia at a number of different scales, using both published and previously unpublished data. Specifically, we have used data from fishery-dependent sources of both the demersal (359 638 trawls) and pelagic fisheries (11 324 purse-seine sets) that cover the period 1992–2006, supported by data from fishery-independent demersal (6 109 trawls) and pelagic trawls (1 817 trawls) from 1996 to 2006. Using frequency of capture as an index of abundance, it is clear that jellyfish are not randomly distributed within the northern Benguela ecosystem, but show specific areas of concentration that broadly reflect regional oceanography and the distribution of other zooplankton. Although jellyfish are present throughout the year, peaks in abundance are shown that often coincide with peaks in the spawning activity of fish of commercial importance. Interannual changes in jellyfish abundance observed from all sources do not agree, with some showing increases, others declines, and still others showing no change, which suggests caution should be exercised in their interpretation. Based on the multiple lines of evidence synthesised here, we conclude that jellyfish abundance has increased concomitant with a decline of pelagic fish stocks. We conclude that future recovery of the pelagic fishery off Namibia is likely to be considerably challenged because of significant overlaps in space and time between fish and jellyfish, and through the effects of competition and predation effects of jellyfish on fish.

Description: A new species of Siboglinum is reported from off the Tejo mouth, Portugal. It was dredged from c. 1100 m. It resembles S. atlanticum and certain other species, in having paired white glandular stripes on the forepart. In the posterior trunk region we found small gram-negative internal symbiotic bacteria. All described species of the genus Siboglinum are equipped with a single tentacle, but one of our specimens bears two tentacles.

Description: Most atmospheric parameters relevant to microbe dissemination into the atmosphere, including aerial transport and deposition, can be monitored by temperature and humidity, aerosols, clouds, precipitation, and wind through current meteorological and other satellite systems. A wide range of these parameters are already extracted and distributed operationally on a regional or global basis like cloudiness, cloud height, cloud motion, winds, surface temperature and atmospheric temperature profiles, and precipitation estimates, Some of these products like cloud motion, winds, and temperature profiles enter weather forecast models for initialization purposes. These models predict the global state of the atmosphere (some include precipitation and cloudiness) quite reliably for several days. Thus, an important part of the necessary technical framework for global disease spread and transmission monitoring exists.

Description: In this paper, drained behaviour of cemented sand under high pressure is studied. A recently developed high pressure triaxial apparatus is used. The test results indicate the significance of degree of cementation and confining pressure on the isotropic compression, volumetric change, stress-strain behaviour and stress-dilatancy relationship of cemented sand at high confining pressures. The results suggest that the influence of cementation is greater at low confining stresses and it reduces with increasing confining stress where the effect of the confining pressure becomes dominant. A Scanning Electron Microscope analysis has also been included in the paper. It revealed that the particle and cement bonding breakage at high pressure is dependent on the stress level and the cement content. The higher the confining pressure the more significant particle and cement bonding breakage is observed. The higher the cement content the fewer sand particles and cement bonds are broken.

Description: The abundance of gold in crustal rocks is an important constraint on the formation of gold deposits. Gold concentrations in unmineralised igneous, sedimentary and metamorphic rocks range from 0.05 to 20 ppb with average concentrations commonly between 0.5 and 5 ppb. Analytical methods with ultra-low detection limits are required to observe the full range of concentrations. Gold concentrations in igneous rocks are strongly controlled by the behaviour of sulphur. Higher gold concentrations occur in sulphur-undersaturated rocks compared to sulphur saturated igneous rocks. Mid ocean ridge basalt has lower gold concentration than ocean-island and volcanic-arc basalt, due mainly to lower oxygen fugacity at MOR settings that causes sulphur saturation. Gold concentrations in sedimentary rocks increase with increasing abundance of diagenetic sulphide minerals and organic matter. Gold concentrations in metamorphic rocks decrease systematically with increasing metamorphic grade. Amphibolite facies rocks commonly contain between 50 and 80% less gold than their unmetamorphosed protolith rocks.

Description: This paper provides an introduction to, and overview of, the natural phenomenon known as the KwaZulu-Natal sardine run. Previous literature on this topic and hypotheses about the reasons why, and the mechanisms how, the run occurs are briefly synthesised and described. Papers contributing to this suite that detail more recent work on a variety of aspects of the sardine run, ranging from physical oceanography through sardine biology and ecology to socio-economic and ecological consequences, are outlined. Such studies will lead to improved understanding of the factors that regulate the timing and intensity of the run, which may permit predictions of whether it will occur, when fish will arrive on the KZN beaches, and how long it will persist. Such predictions would have substantial benefits for this ecologically and economically important event.

Description: Changes in the ovaries and testes during sexual maturation of Loligo vulgaris reynaudii were examined histologically. Fonnation and development of the spermatozoa and oocytes could be divided into four distinct stages for males and five for females, and frequencies of these stages in the morphologically determined categories of development of the whole reproductive System were calculated. These frequencies were then compared between morphological categories. Results showed that microscopic changes are reflected in macroscale changes for Categories I-IV, but differences between Categories IV and V are mostly morphological for both sexes. It is suggested that Loligo v. reynaudii is an intermittent spawner.

Description: A study of the echo peak amplitudes from known nodule areas is initiated to observe the acoustic response for varying nodule abundances and number densities. A statistical study of the peak amplitudes from different nodule areas confirms that the coefficient of variation is the highest for medium nodule abundance and number density. Echo fluctuation study based on the Rician probability density function (PDF) establishes that the non‐nodule sediment bottom contributes to less scattering, i.e., it is a microtopographic type, whereas scattering is dominant in the nodule‐bearing areas. The spectral studies are conducted on depth data of different areas. This study ensures that the signal scattering in the nodule bottom area is due to the nodules lying on the seabed rather than the large / small‐scale topographic variations. The study based on Poisson PDF for nodule area confirms this fact again. Agreement between the nodule distribution and the Poisson distribution parameter is clearly seen. Such a relation is not observed in the case of Rician density functions.

Description: General biology of cephalopods is described. First, all commercially important cephalopods are classified and the general morphology and distribution of all major families is described in detail. Mating and spawning characteristics of all major families are discussed in detail. This is followed by a discussion on early life history, growth and principal ecoological changes that occur during the growth period. Schooling and migration characteristics are also taken up in considerable detail. The paper closes with a brief discussion on the trophic relation. The author points out that cephalopods are extremely important to mankind due to their unique position in the food chain extending from the oceans to man.

Description: Larval behaviour, settlement, and metamorphosis were investigated in four Caribbean commercial sponges, Hippospongia lachne, Spongia barbara, S. cheiris and S. graminea, using light and transmission electron microscopy. The parenchymella larvae of these viviparous and gonochoristic species have an average size of 350 μm by 420 μm when released. Symbiotic bacteria occur intercellularly in both larvae and post-larvae. Laboratory behavioural studies demonstrate that free-swimming larvae display directional swimming with constant lateral rotation and negative phototaxis. Larval settlement occurs 26–56 hours after release from the parent and involves the formation of a basal lamella between the post-larva and substrate. There is no evidence of larval substrate selection by type or orientation. The canal system begins to form six days after settlement and oscules are apparent eleven days post-settlement. Available evidence suggests that larval ciliated epithelial cells are terminally differentiated and do not appear to contribute to formation of post larva or adult in this group of Porifera.

Description: To evaluate the feasibility of feeding Sepia officinalis on artificial food, a food pellet consisting of Palaemon serratus powder and alginate as binding agent was developed and tested. Six of seven cuttlefish clearly ingested the artificial food during the ten days it was supplied.

Description: Knowledge concerning biology of two loliginids and three sepiids which are found in the Japanese waters was reviewed including unpublished information of the authors. The swordtip squid, Photololigo edulis, is one of the most important resources for the coastal fisheries of Kyushu and the prefectures facing the southwest Japan Sea. This species is the only species of genus Photololigo found along the Japanese mainland coast and is easily distinguished from other loliginids, by the light organs on the ink sac. The species is distributed from southern Japan to the Red Sea. The spawning season extends throughout the year. Egg cases are laid in clusters on the sandy bottom. The life span is about one year. In the juvenile stage they feed on Crustacea and after reaching pre‐maturity they prey mainly on fish, but many have empty stomachs. Most catches are made by jigging and trawler. The fishing season extends throughout the year. The fishing grounds are widely spread over the continental shelf. Annual catches are around 25 000 metric tonnes. Although this level varies from year to year, it is fairly stable. Fishing has probably little effect on the stocks. The spear squid, Heterololigo bleekeri, can be easily distinguished from other loliginids by its shorter tentacles. The species is endemic in the Far East waters. The stocks are larger in the north. The spawning season is winter in south Japan, and from spring to early summer in north Japan. Egg cases are laid beneath the undersurfaces of firm substances. The life span is about one year. Its feeding behaviour is similar to that of the swordtip squid. Catches are made mainly with bottom trawler and fixed nets from autumn to spring. Annual landings fluctuate widely from year to year. Several prefectures along the northern Japan Sea coast are promoting the large scale development of artificial spawning beds of the species to increase the stocks. The three sepiids, golden cuttlefish. Sepia esculenta, kisslip cuttlefish. Sepia lycidas, and spineless cuttlefish, Sepiella japonica are important in mainland Japan. Those three spawn from spring to early summer in the innermost waters of semi‐enclosed inlets. Eggs are laid in batches of 50–300 every day for 3–4 days followed by a rest period of 1–2 days. This pattern is repeated until several thousands of eggs have been laid. The life span of Sepia esculenta and Sepiella japonica is one year. They feed mainly on decapod crustaceans and fish but as growth proceeds the proportion of fish increases. They are fished mainly by cuttlefish trap and beam trawler. In the early 1960s annual landings were 20 000 metric tonnes but since 1980 catches have decreased below 10 000 metric tonnes. Of the three species, the stock of Sepiella japonica is the most fluctuable. Judging from the result of the stock assessment studies on Sepiella japonica in the western Inland Sea, their stocks have been over‐exploited.

Description: In this article, wave refraction and shoaling in coastal areas were investigated and used to derive the bathymetry. With its high spatial resolution, which can achieve up to 1 m in SpotLight mode, and its low cut-off wavelength, the TerraSAR-X satellite provides images that are particularly suitable for the observation of wave behaviour in transient and shallow waters. By computing the two-dimensional (2D) spectra, shoaling waves were tracked from the open sea to the shoreline. The observed wave refraction and shoaling were compared with wave refraction laws and first-order wave theory (Airy theory). The retrieved bathymetry was compared against depth data from other sources such as ETOPO1, the US Coastal Relief Model and sea charts from the British Admiralty. A further aim of this article was the investigation of breaking waves showing up as near-shore image patterns. A theory is presented of how to derive the height of breaking waves by use of this pattern. Synthetic aperture radar (SAR) images with azimuth as well as range travelling waves were investigated. As test sites, we chose the entrance of Port Phillip near Melbourne (Australia) and the Duck Research Pier in North Carolina (USA).

Description: Mineral exploration activities require robust predictive models that result in accurate mapping of the probability that mineral deposits can be found at a certain location. Random forest (RF) is a powerful machine data-driven predictive method that is unknown in mineral potential mapping. In this paper, performance of RF regression for the likelihood of gold deposits in the Rodalquilar mining district is explored. The RF model was developed using a comprehensive exploration GIS database composed of: gravimetric and magnetic survey, a lithogeochemical survey of 59 elements, lithology and fracture maps, a Landsat 5 Thematic Mapper image and gold occurrence locations. The results of this study indicate that the use of RF for the integration of large multisource data sets used in mineral exploration and for prediction of mineral deposit occurrences offers several advantages over existing methods. Key advantages of RF include: (1) the simplicity of parameter setting; (2) an internal unbiased estimate of the prediction error; (3) the ability to handle complex data of different statistical distributions, responding to nonlinear relationships between variables; (4) the capability to use categorical predictors; and (5) the capability to determine variable importance. Additionally, variables that RF identified as most important coincide with well-known geologic expectations. To validate and assess the effectiveness of the RF method. Statistical measures of map quality indicate that the RF method performs better than LR, with mean square errors equal to 0.12 and 0.19, respectively. The efficiency of RF is also better, achieving an optimum success rate when half of the area predicted by LR is considered.

Description: Plastic debris accumulates in the marine environment following its use in agricultural, industrial and social activities. Its ultimate fate is accomodation in sediments where it may persist for times up to centuries or longer. There appears to be an increasing flux of materials with time and an increased areal coverage of the benthos. Impacts upon bottom organisms can take many forms. Systematic monitoring tactics for the extent of seafloor coverage by plastics are yet to be incorporated into national programs.

Description: During the ‘Meteor’ Expedition 13 in July and August 1990 to the northern part of the Norwegian Sea off west Spitsbergen, 7 stations with a depth of 2000 m or more were sampled with Agassiz trawl or hyperbenthos sledge, 14 more with a large box corer. Sponges were found at 6 of the trawl stations and in 2 box cores. A total of 19 species occurred, most of which were new to the area. Eight of the species were encountered more often than the other 11. Literature review and check of unpublished samples showed that by distribution, frequency of occurrence or abundance these species can be defined as the typical sponge association of the Norwegian and Greenland abyssal sea. This sponge association has a wide occurrence over the deep Norwegian-Greenland seas and parts of the Arctic basins. The analysis of substrate utilization of the 8 core species shows that all of them are able to colonize soft bottom, even some that previously had been considered to be dependent on hard substrate exclusively. Alternative substrate utilization and, in some species, the adoption of an infaunallife style are judged to be major reasons for the success of these species in the deep sea. The infaunal life style of the species Thenea abyssorum, Trichostemma sol and Tentorium semisuberites is documented and population structure data are given for the first time.

Description: The community of benthic organisms in the lower zone of a rocky shore at Praia Rasa, Brazil is distinctly patchy in structure. We examined the hypothesis that two types of patch (a. red algal turf and b. colonial coelenterate) represent different temporal stages in the same successional trajectory. We made observations on a) the stability of patch boundaries, b) successional sequence in experimental clearings within both patch types and c) species composition through time in undisturbed patches. In most cases, the coelenterate overgrew the algae at the patch boundaries, thus showing a competitive asymmetry. In the successional sequence, diatoms were followed by ulvoid species. Thereafter, within clearings in the algal patches, a red algal turf was once more established over one year. In contrast, the mid successional period in clearings within the coelenterate patch was characterized by very low cover of sessile organisms. Colonization by red algal turfs and by the coelenterate colony is largely dependent on vegetative spread. Thus later succession is not predictable on the basis of time alone. Supply-side processes are clearly of equal importance. Therefore it cannot be stated without qualification that patches of red algal turfs and colonial coelenterate at Praia Rasa are part of the same successional sequence.

Description: A vertical mixing model was applied to a location off the west coast of the South Island, New Zealand, with the aim of simulating the seasonal cycle of temperature and mixed layer depth in the region. Observed weather data for 1973–89 were used to drive the model. Model results for sea temperature and mixed layer depth were compared to measurements from ships, moored temperature sensors, and satellites. The main features of the variations in temperature and mixed layer depth can be explained by the local meteorological forcing and vertical mixing, together with a general southward flow in the study area. Superimposed are short‐term variations which are obviously related to variable currents and the associated horizontal heat transport.

Description: Specimens of Siboglinum poseidon were collected by box coring and studied together with their undisturbed habitat. Occupied tubes occur in depse aggregations beneath the sediment surface directly at methane seep sites. Fertilized eggs develop into small larvae within the anterior transparent region of the tube. The oldest larvae observed in tubes measure c. 370 µm in length. It is concluded that released larvae develop in the sediment in the oxygenated top layer. Three tube types have been found: 1, the larval envelope; 2, the juvenile, transparent tube and 3, the ringed, adult tube. The smallest specimens recovered from the sediment measure c. 2 mm. They are complete with a tentacle, pyriform glands, bacteriocytes and juvenile opisthosoma. Some larvae were reared under laboratory conditions for 10 weeks. At that stage red blood becomes visible and a small tentacular bud is formed dorsally.

Description: Kanechlor-300, -400, -500 and -600, Phenoclor DP-3, -4, -5 and -6 and Sovol mixtures were analyzed for their chlorobiphenyl (CB) composition using high-resolution one-dimensional and multidimensional gas chromatography-electron capture detection (MDGC-ECD) techniques. The congener patterns of tested Kanechlor and Phenoclor mixtures resembled Aroclor 1016, 1242, 1254 and 1260. However, differences in the percentage contribution of minor constituents were noticed among these mixtures, which could be due to variations in the boiling-point fractionation of these commercial products. CB pattern of Sovol was different from the rest of the mixtures tested. It showed a composition in between ca. 30%, 40%, 50% and 60% overall chlorine levels. MDGC-ECD study showed the presence of hitherto unnoticed non-CB compounds coeluting with CBs in some commercial PCBs. The use of these mixtures as quantitation standards should be considered with caution. CB patterns of Sovol and a water extract of the Gulf of Finland matched closely, indicating a point source contamination to these waters.

Description: A series of field experiments has been made to determine the occurrence of small-scale surface motions that might enhance gas exchange by surface renewal. Out of 93 runs under natural conditions on open bodies of water, only 19 gave no indication of surface streaming within a few seconds. The data cover the wind speed range up to about 6 ms-1. Above 2 or 3 ms-1, predominately line structures were observed. This points to an important r6le of surface renewal in gas exchange.

Description: Climatological data sets are used to estimate the amount of water changing temperature and salinity at the sea-surface owing to air-sea exchanges. Considering this conversion as a function of sea-surface temperature and salinity leads to the definition of a conversion vector, which represents mass sources and sinks for each water type. The vector representation shows graphically the way the shape of the temperature-salinity relation is driven at the surface by the air-sea heat and fresh water fluxes.

Description: A thorough knowledge of global ocean precipitation is an indispensable prerequisite for the understanding of the water cycle in the global climate system. However, reliable detection of precipitation over the global oceans, especially of solid precipitation, remains a challenging task. This is true for both, passive microwave remote sensing and reanalysis based model estimates. The optical disdrometer ODM 470 is a ground validation instrument capable of measuring rain and snowfall on ships even under high wind speeds. It was used for the first time over the Nordic Seas during the LOFZY 2005 campaign. A dichotomous verification of precipitation occurrence resulted in a perfect correspondence between the disdrometer, a precipitation detector and a shipboard observer's log. The disdrometer data is further point-to-area collocated against precipitation from the satellite based Hamburg Ocean Atmosphere Parameters and fluxes from Satellite data (HOAPS) climatology. HOAPS precipitation turns out to be overall consistent with the disdrometer data resulting in a detection accuracy of 0.96. The collocated data comprises light precipitation events below 1 mm h–1. Therefore two LOFZY case studies with high precipitation rates are presented that indicate plausible HOAPS satellite precipitation rates. Overall, this encourages longer term measurements of ship-to-satellite collocated precipitation in the near future.

Description: Many Penicillium species produce enzyme systems with good performances in lignocellulose degradation. In our laboratory, lignocellulolytic enzyme-producing Penicillium oxalicum (formerly classified as Penicillium decumbens) strains have been studied for more than 30 years. High cellulase-producing mutants have been obtained through random mutagenesis and genetic engineering, and the components in the enzyme systems have been elucidated using systems biology tools. The effects of different carbon sources on the production level of lignocellulolytic enzymes have been studied, and the related molecular mechanisms have been investigated. When compared with the widely used cellulase producer Trichoderma reesei, some unique features have been found in P. oxalicum, including higher β-glucosidase activity, higher numbers of lignocellulolytic enzyme gene, and different response of cellulase gene expression to some disaccharides. To boost the economic potential of the biorefineries using lignocellulosic biomass, P. oxalicum strains need to be further improved regarding the performance and production level of the enzyme systems.

Description: The temporal and spatial variability of sea-ice radar signatures in the Southern Ocean during late winter, spring and early summer from QuikSCAT data is presented. We observe a circumpolar and broad band of sea-ice close to the marginal ice zone that is characterized by very high radar backscatter. This feature is explained through detailed in situ observations of snow and sea-ice properties as well as in relation to meteorological conditions, which were derived from US National Center for Environmental Prediction (NCEP)/National Center for Atmospheric Research (NCAR) reanalysis data. Our results indicate that high backscatter regions are caused by metamorphous snow, which forms through re-freezing after short-term melt events. This process is connected with the episodic passes of low-pressure systems entraining warmer air from the north. South of the Antarctic Circumpolar Trough, sea-ice is not affected by this influence and shows spatially homogenous microwave signatures with low backscatter.

Description: The assessment of direct effects of anthropogenic CO2 increase on the marine biota has received relatively little attention compared to the intense research on CO2-related responses of the terrestrial biosphere. Yet, due to the rapid air–sea gas exchange, the observed past and predicted future rise in atmospheric CO2 causes a corresponding increase in seawater CO2 concentrations, [CO2], in upper ocean waters. Increasing [CO2] leads to considerable changes in the surface ocean carbonate system, resulting in decreases in pH and the carbonate concentration, [CO2−3]. These changes can be shown to have strong impacts on the marine biota. Here we will distinguish between CO2-related responses of the marine biota which (a) potentially affect the ocean's biological carbon pumps and (b) are relevant to the interpretation of diagnostic tools (proxies) used to assess climate change on geological times scales. With regard to the former, three direct effects of increasing [CO2] on marine plankton have been recognized: enhanced phytoplankton growth rate, changing elemental composition of primary produced organic matter, and reduced biogenic calcification. Although quantitative estimates of their impacts on the oceanic carbon cycle are not yet feasible, all three effects increase the ocean's capacity to take up and store atmospheric CO2 and hence, can serve as negative feedbacks to anthropogenic CO2 increase. With respect to proxies used in palaeo-reconstructions, CO2-sensitivity is found in carbon isotope fractionation by phytoplankton and foraminifera. While CO2- dependent isotope fractionation by phytoplankton may be of potential use in reconstructing surface ocean pCO2 at ancient times, CO2-related effects on the isotopic composition of foraminiferal shells confounds the use of the difference in isotopic signals between planktonic and benthic shells as a measure for the strength of marine primary production. The latter effect also offers an alternative explanation for the large negative swings in δ13C of foraminiferal calcite between glacial and interglacial periods. Changes in [CO2−3] affect the δ18O in foraminiferal shells. Taking this into account brings sea surface temperature estimates for the glacial tropics closer to those obtained from other geochemical proxies.

Description: A model of the interactive effects of disturbance and productivity on diversity predicts peak diversity to shift towards higher disturbance regimes as productivity increases, confining the Intermediate Disturbance Hypothesis to intermediate productivity levels. We conducted a two-factorial (disturbance, nutrients) field experiment to test the validity of this model for two subtropical intertidal rocky shores. Treatment responses varied between distinct community types at two sites. Intensified disturbance increased evenness, and under high nutrient enrichment decreased species richness of communities dominated by encrusting algae, whereas turf-dominated communities remained unaffected. Nutrient additions increased biomass and modulated community composition at both sites, in addition to increasing species richness in encrusting-algal and decreasing evenness of turf-forming assemblages. Thus, only highly enriched encrusting-algal communities followed the model predictions. Different mechanisms appear to control species coexistence in different types of communities, some violating the assumptions of the tested model, i.e. resource limitation and competitive exclusion.

Description: Prevention of epibiosis is of vital importance for most aquatic organisms, which can have consequences for their ability to invade new areas. Surface microtopography of the shell periostracum has been shown to have antifouling properties for mytilid mussels, and the topography shows regional differences. This article examines whether an optimal shell design exists and evaluates the degree to which shell microstructure is matched with the properties of the local fouling community. Biomimics of four mytilid species from different regional provenances were exposed at eight different sites in both northern and southern hemispheres. Tendencies of the microtopography to both inhibit and facilitate fouling were detected after 3 and 6 weeks of immersion. However, on a global scale, all microtopographies failed to prevent fouling in a consistent manner when exposed to various fouling communities and when decoupled from other shell properties. It is therefore suggested that the recently discovered chemical anti-microfouling properties of the periostracum complement the anti-macrofouling defence offered by shell microtopography.

Description: The capture of 52 specimens of the cirrate octopod Grimpoteuthis glacialis (Robson, 1930), of dorsal mantle length 20-165 mm during a 1996 trawling survey near the Antarctic Peninsula allowed the basic biology of the species to be examined. Their presence in bottom trawls at depths of 333-879 m, but their absence from benthopelagic and pelagic trawls, is consistent with a primarily benthic habitat. The largest single sample, 40 animals, came from a soft mud bottom and highlights the patchy nature of the distribution. Males tended to be bigger in total length and mass than females of similar mantle length. The males, however, were mature at a smaller size. Mature males have tiny sperm packets, rather than typical cephalopod spermatophores, in their distal reproductive tract. Mature females have large, smooth eggs in the proximal oviduct, in the huge oviducal gland and in the distal oviduct. Eggs in the distal oviduct have a thick, sticky coating that hardens in seawater into a secondary egg case. Ovarian eggs vary greatly in size, possibly indicating protracted egg laying. Observations on live animals indicate that the species swims primarily by fin action, rather than by jetting or medusoid pulses with the arm/web complex. It may be capable of limited changes in colour pattern, especially on the oral surface of the web. Three pairs of surface structures that appear superficially to be white spots anterior to the eyes and near the bases of the fins are actually transparent patches in the skin. When considered in association with the transparent subdermal layer and the anatomy of the eyes, optic nerves and optic lobes, these clear patches seem to function in detecting unfocused light on the horizontal plane of the benthic animal.

Description: The model presented here provides an explanation of the rapid response of atmospheric CO2 to increasing solar insolation. In the glacial ocean, during periods of slow, deep water renewal, when less oxygen is supplied to the deep ocean and into sediments, manganese oxide in the sediments is reduced and forms soluble MnCO3 and stays in the water column. The dissolved Mn-carbonate should then reach a concentration of ≥ 10µMol/liter, approximately 5,000 to 104 times larger than it is at present. This is the mode prevailing until deep water formation at high latitudes starts again. As soon as the balance between oxygen and organic matter becomes oxidizing once more, the deposition of MnO2 recommences. Oxidation of dissolved Mn2+CO3 to Mn4+O2 which is a spike of acidity to the ocean, rapidly lowers the CO3−− concentration in the water column and enhances release of CO2 to the atmosphere, producing the observed events of CO2 increase at the transitions from glacials to interglacials. The surprising conclusion is that the oceanic (redox-) cycle of a minor element may have had a major impact on Earth's climate.

Description: Grab samples collected in 1987 from the Valu Fa back-arc ridge in the SW Pacific include sulfide-bearing basaltic andesites and andesitic xenoliths, massive sulfide-barite-silica mineralization, native sulfur, and a large number of Fe-Mn crusts. Sphalerite, pyrite, marcasite, barite, and amorphous silica are the predominant minerals in the massive samples. Smaller amounts of chalcopyrite, galena, tennantite, and covellite have been identified. This assemblage formed at the seafloor from smoker-type hydrothermal fluids with temperatures 〈300°C and high concentrations of reduced sulfur. Sulfide mineralization in basaltic andesites consists of disseminated pyrite and marcasite. The scarity of pyrrhotite suggests precipitation of sulfides under elevated fS2-fO2 conditions and at temperatures that may have been as low as 150°C. Extensive deposits of Fe- or Mn-dominated hydrothermal crusts at the Valu Fa Ridge have formed at considerably lower temperatures (≤20°C). High-temperature hydrothermal products including intergrowths of Cu-Fe-Zn-S intermediate solid solution and pyrrhotite were found in a mineralized xenolith from a subvolcanic level.

Description: Mid-latitudinal cyclones are a key factor for understanding regional anomalies in primary meteorological parameters such as temperature or precipitation. Extreme cyclones can produce notable impacts on human society and economy, for example, by causing enormous economic losses through wind damage. Based on 41 annually initialised (1961–2001) hindcast ensembles, this study evaluates the ability of a single-model decadal forecast system (MPI-ESM-LR) to provide skilful probabilistic three-category forecasts (enhanced, normal or decreased) of winter (ONDJFM) extra-tropical cyclone frequency over the Northern Hemisphere with lead times from 1 yr up to a decade. It is shown that these predictions exhibit some significant skill, mainly for lead times of 2–5 yr, especially over the North Atlantic and Pacific. Skill for intense cyclones is generally higher than for all detected systems. A comparison of decadal hindcasts from two different initialisation techniques indicates that initialising from reanalysis fields yields slightly better results for the first forecast winter (month 10–15), while initialisation based on an assimilation experiment provides better skill for lead times between 2 and 5 yr. The reasons and mechanisms behind this predictive skill are subject to future work. Preliminary analyses suggest a strong relationship of the model’s skill over the North Atlantic with the ability to predict upper ocean temperatures modulating lower troposphere baroclinicity for the respective area and time scales.

Description: The bright colouration of the cytoplasm in intertidal rotaliid foraminifera and their particle-gathering activity reliably reveals live specimens in fresh samples, without any fixatives or dyes applied. Using this approach, we demonstrate that live representatives of three rotaliid species, all belonging to the genus Elphidium, were common on intertidal mud and sand beaches. Two species, E. excavatum clavatum and E. albiumbilicatum, lived close to freshwater outflows, whereas E. williamsoni occupied beaches bathed by waters with normal salinity (surface 26–27‰ in the western White Sea). A least 13 species were found alive in the intertidal zone. Among non-calcareous foraminifera, Miliammina fusca, Ammotium cassis and Ovammina opaca were the most numerous.

Description: According to historical data, the glacial relict higher crustaceans, Mysis relicta and Pallaseopsis quadrispinosa, as well as a plankton crustacean Limnocalanus macrurus had earlier been recorded in Lake Drüksiai. Our data and investigations of other authors evidence that these crustaceans no longer inhabit the lake. What are the prospects for the recovery of these crustaceans after restoring the natural thermal regime in Lake Drüksiai? One of the possibilities is to reintroduce these species after restoring the natural thermal regime in the lake and improving dissolved oxygen level in the hypolimnion, which would provide conditions for long-term survival and recovery of populations of these crustaceans. As reintroduction of relict species is rather costly, it is necessary to assess effectiveness of such works.

Description: Cytochromes P450 (P450) and associated monooxygenases are a family of heme proteins involved in metabolism of endogenous compounds (arachidonic acid, eicosanoids and prostaglandins) as also xenobiotics including drugs and environmental chemicals. Liver is the major organ involved in P450-mediated metabolism and hepatic enzymes have been characterized. Extrahepatic organs, such as lung, kidney and brain have the capability for biotransformation through P450 enzymes. Brain, including human brain, expresses P450 enzymes that metabolize xenobiotics and endogenous compounds. AREAS COVERED: An overview of P450-mediated metabolism in brain is presented focusing on distinct differences seen in expression of P450 enzymes, generation of unique P450 enzymes in brain through alternate splicing and their consequences in terms of metabolism of psychoactive drugs and inflammatory prompts, such as leukotrienes, thus modulating inflammatory response. EXPERT OPINION: The brain possesses unique P450s that metabolize drugs and endogenous compounds through pathways that are markedly different from that seen in liver indicating that extrapolation directly from liver to brain is not appropriate. It is therefore necessary to characterize the unique brain P450s and their ability to metabolize xenobiotics and endogenous compounds to better understand the functions of this important class of enzymes in brain, especially human brain.

Description: Exposure of Fucus spiralis germlings to precise copper concentrations (0 to 844 nM Cu2+) in chemically defined medium demonstrated a relationship between urltrastructural changes and growth retardation with increasing copper concentration. Electron-translucent vesicles, present in ova, which normally disappear after fertilization, accumulated in germlings exposed to Cu2+ above 10.6 nM, suggesting that copper may inhibit a metabolic pathway involved in cell wall formation which is initiated by fertilization No membrane damage was observed during the exposure period. During a post-exposure period in copper-free medium, recovery occurred (rhizoid extension, apical hair formation) in germlings previously exposed to concentrations below 106 nM Cu2+ and electron-translucent vesicles became granular and disappeared. It is proposed that the electron-translucent vesicles contain a cell wall precursor and that copper inhibits its incorporation into the cell wall, preventing growth and development of the zygote.

Description: The important role of marine epibiotic biofilms in the interactions of the host with its environment has been acknowledged recently. Previous studies with the temperate brown macroalga Fucus vesiculosus have identified polar and non-polar compounds recovered from the algal surface that have the potential to control such biofilms. Furthermore, both the fouling pressure and the composition of the epibiotic bacterial communities on this macroalga varied seasonally. The extent to which this reflects a seasonal fluctuation of the fouling control mechanisms of the host is, however, unexplored in an ecological context. The present study investigated seasonal variation in the anti-settlement activity of surface extracts of F. vesiculosus against eight biofilm-forming bacteria isolated from rockweed-dominated habitats, including replication of two populations from two geographically distant sites. The anti-settlement activity at both sites was found to vary temporally, reaching a peak in summer/autumn. Anti-settlement activity also showed a consistent and strong difference between sites throughout the year. This study is the first to report temporal variation of antifouling defence originating from ecologically relevant surface-associated compounds.

Description: The mussel Mytilus galloprovincialis is a common aquaculture species, and also a major fouling organism that has negative economic impacts. There are no standard assay conditions for this important species and therefore, this study quantified the effect of key factors on the settlement of pediveligers and plantigrades. Density dependent settlement did not occur for either pediveligers or plantigrades. Settlement increased in drop assays in a 12 h light:12 h dark cycle, while bottom shade had no effect of any magnitude. In addition, settlement was significantly enhanced by storing pediveligers for between 4 and 24 days at 4 °C. Overall, these data provide the template to optimise and standardise static laboratory settlement assays for mussels in order to develop materials that either enhance settlement for the aquaculture industry, or deter settlement for antifouling applications. Furthermore, simple mechanisms such as storage at 4 °C can enhance settlement beyond current methods used in aquaculture hatcheries.

Description: The mean pressures required to collapse gas vesicles in turgid cells of cyanobacteria from the Baltic Sea were 0·91 MPa (9·1 bar) in Aphanizomenon flos-aquae, 0·83 MPa in Nodularia sp. collected from the main deep basins and 0·34 MPa in Nodularia from shallower coastal regions. The gas vesicles were strong enough to withstand the depth of winter mixing, down to the permanent halocline (60 m in the Bornholm Sea, 90 m in the Eastern Gotland Sea) or to the sea bottom (30 m or less in the shallow Arkona Sea and Mecklenburg Bight). The cyanobacteria had low cell turgor pressures, within the range 0·08–0·18 MPa. The colonies were highly buoyant: the Aphanizomenon colonies floated up at a mean velocity of 22 m per day and the Nodularia colonies at 36 m per day. The colonies remained floating when up to half of the gas vesicles had been collapsed. In summer the cyanobacteria were mostly restricted to the water above the thermocline and in calm conditions their concentration increased towards the top of the water column. A series of colony concentration profiles indicated that, following a deep mixing event, the population of colonies moved upward with a net velocity of 22 m per day, similar to the colony floating velocity. This demonstrated that the buoyancy provided by gas vesicles would give a selective advantage to populations of cyanobacteria by enabling them to float into the higher irradiance of the near-surface water.

Description: The buoyancy flux at the air/sea interface plays a key role in water mass transformation and mixing as it modifies surface water density and in turn drives overturning and enhances stratification. It is the interplay of these two independent heat and freshwater buoyancy flux components that is of central importance when analysing mechanisms of the ocean/atmosphere interaction. Here, a diagnostic quantity (ΘB) is presented that allows to capture the relative contribution of both components on the buoyancy flux in one single quantity. Using NCEP reanalysis of heat and freshwater fluxes (1948–2009) demonstrates that ΘB is a convenient tool to analyse both the temporal and spatial variability of their corresponding buoyancy fluxes. For the global ocean the areal extent of buoyancy gain and loss regions changed by 10%, with the largest extent of buoyancy gain during the 1970–1990 period. In the subpolar North Atlantic, and likewise in the South Pacific, decadal variability in freshwater flux is pronounced and, for the latter region, takes control over the total buoyancy flux since the 1980s. Some of the areal extent time series show a significant correlation with large-scale climate indices.

Description: The chemical defence against microfouling in the brown seaweed Fucus vesiculosus was investigated and an inhibitor of bacterial settlement was isolated by bioassay-guided fractionation of non-polar surface extracts. UV-vis and mass spectrometry were used to identify the compound as the carotenoid fucoxanthin. The metabolite was tested at the natural concentration (in a surface volume based assay) against the settlement of four bacterial strains isolated from F. vesiculosus and 11 strains isolated from co-occurring algae and marine sediment. Surface concentrations between 1.4 and 6 μg cm-2 resulted in 50% inhibition of four of these isolates, which were studied in more detail using a surface area-based assay, while a fifth isolate proved to be less sensitive. The presence of fucoxanthin on the surface of F. vesiculosus was demonstrated with two different surface extraction methods. Fucoxanthin was detected at concentrations between 0.7 and 9 μg cm-2 on the algal surface. Fucoxanthin was still present at the algal surface after removal of associated diatoms through mechanical cleaning and germanium dioxide treatment and was thus mainly produced by F. vesiculosus rather than by diatoms. Thus, the photosynthetic pigment fucoxanthin appears to be ecologically relevant as a surface-associated antimicrobial agent, acting against the settlement of bacteria on the surface of the macroalga F. vesiculosus.

Description: The “rugophilic”; behaviour (e.g. the preference for settling in concavities) of barnacles is well documented. In contrast, little is known about settlement preferences of other species with regard to surface microtopography. In a randomized block design, five different rugosities (smooth, 0.1 mm, 0.5 mm, 1 mm, 5 mm) were exposed to natural fouling in the Baltic Sea. In four experiments, test panels were colonized by Mytilus edulis, Polydora dliata, Balanus improvisus, diatoms, hydrozoa, bryozoa, and several ciliates. Settlement densities and microtopographical preferences for pits or elevations as a function of grain size were evaluated. Rugosities influenced settlement densities and the microtopographical preferences of almost all investigated species. Settlement densities were generally lowest on smooth panels, with most species showing distinct preferences for different rugosities. While a preference for pits was frequent, in some species the proportion of individuals settling on elevations significantly increased with roughness. These data on microtopographical preferences of different species give new insights into interactions between settlement behaviour, surface roughness, boundary layer hydrodynamics and community structure.

Description: The copepod family Oncaeidae is widely distributed in the world's oceans and includes many small and abundant species. Due to their small size and the existence of sister and sibling species in different parts of the ocean, species identification is very difficult. Quantitative studies on copepod communities usually consider oncaeids at the family level only, or present uncertain species names, when based on regional identification keys not established for the study area. This paper aims to develop the basis for an improved taxonomic resolution of oncaeids in ecological studies. It summarizes the most relevant morphological elements to characterize the seven presently known genera and to define in addition 16 species groups within the paraphyletic taxon Oncaea s.l. On this basis, a worldwide identification key for oncaeids is presently being developed, restricted to genera and species groups, with species included as far as the state of knowledge allows.

Description: A quantitative relationship between observed sea-ice roughness and simulated large-scale deformation work is established in order to provide new means for model validation and a better representation of the sea-ice component in climate modelling. Sea-ice roughness is introduced as an additional prognostic variable in a dynamic–thermodynamic sea-ice model with a viscous-plastic rheology. It is defined as the accumulated work of internal forces acting upon an ice volume, given in energy per area. A fraction of this total deformation work is transferred to the potential energy stored in pressure ridges. Using ridge geometries and distribution functions from observations, observable quantities like mean pressure ridge height, ridge frequency as well as volumetric and areal fractions of deformed ice are derived from the simulated ice roughness. Comparisons of these simulated quantities with measurements (submarine-borne sonars, laser altimeters on helicopters) show good agreement. Satellite-borne observations of sea-ice roughness now under development will provide an even larger data set which will be used for model verification. Additionally roughness-dependent drag coefficients are introduced to account for the effect on the momentum exchange between ocean and atmosphere due to the form drag of roughness elements. The simulations indicate that the inclusion of sea-ice roughness provides for a more realistic representation of the boundary layer processes in climate models.

Description: A two-leg cruise of R/V G. O. Sars in summer of 2004 along the Mid-Atlantic Ridge explored the diversity and distribution patterns of pelagic and non-hydrothermal bottom communities in the vicinity of the northern Mid-Atlantic Ridge. In total, 1295 cephalopods were caught, representing 56 species. Differences in species composition and size were apparent among the various types of trawls used. The Aakra trawl and bottom trawl caught the largest numbers of species (38 and 34, respectively); size of cephalopods was directly related to the size of the net. Many more species were caught in the southern part of the study area than farther north. The most abundant species was Gonatus steenstrupi, found mostly in the northern part of the study area. A few abundant species, such as Mastigoteuthis agassizii, were found throughout the region, with no clear indication that their northern or southern distributional limits occur within the area sampled. Several benthic and one pelagic species, all taken in small numbers, were captured only in the region of the Charlie Gibbs Fracture Zone. We found many species at very low numbers (i.e. 37 species with 〈10 specimens in all gear types combined).

Description: This study investigated whether surface-associated compounds isolated from the macroalga Fucus vesiculosus had the potential to mediate microbial and/or macrobial epibiosis similar to that on the natural alga. To selectively yield thallus-associated compounds and avoid contamination by intracellular algal compounds, cell lysis was monitored by surface microscopy of algal cells and chemical profiling of algal surface extracts by coupled gas chromatography mass spectroscopy. The optimized extraction resulted in polar and non-polar algal surface extracts. The non-polar surface extract was immobilized in hydrogel, the polar surface extract was homogeneously perfused through the gel to ensure a temporally constant delivery of polar extract components. During a 7day field trial, bacterial biofilms were formed on control gels and gels featuring polar and/or non-polar extract components. PERMANOVA revealed that bacterial community profiles on controls and on gels featuring polar or non-polar extract were significantly different from the profile on F. vesiculosus, while the profile on the gels bearing both polar and non-polar extracts was not. Moreover, the polar surface extracts inhibited the settlement of barnacle cyprids. Considering the pronounced effects of bacterial biofilms on invertebrate larval settlement, these results suggest that algal surface chemistry affects macrofouling not only directly but also indirectly, via its control of biofilm formation and composition

Description: Individual polychlorinated biphenyl (CB) congeners in adipose and whole blood tissues of a capacitor manufacture worker (occupational/accidental exposure) and of the general population were determined. Nondestructive sample cleanup and multidimensional gas chromatography-electron capture detection (MDGC-ECD) techniques were applied. Special attention was given to the toxicologically relevant congeners CB-77, CB-126, CB-169, CB-105, CB-114, CB-118, CB-156, CB-167, and CB-189 (IUPAC). Lipid-based tissue contents of sigma CBs were higher in the occupationally/accidentally exposed worker (adipose = 7,000 ng/g; whole blood = 11 ng/g) than in the general population (adipose = 300 ng/g; whole blood = 1.9 ng/g). Among the non-ortho Cl CBs, CB-77 was below detection limit (〈 1.0 pg/g). The contents of CB-126 for the capacitor manufacture worker were 2,000 and 3 pg/g, and in the general population were 100 and 2 pg/g for adipose and whole blood, respectively. The corresponding data for CB-169 were 3,500 and 4 for adipose and whole blood, respectively, in the exposed worker, and 40 and 2 for adipose and whole blood, respectively, in the general population. Congeners with highest contents were CB-153, CB-138, CB-180, CB-170, and CB-187. These congeners possess chlorine substitution patterns, making them resistant to metabolism. X/153 ratios suggest that both PB and 3-MC type cytochrome P-450 enzymes were induced in the exposed worker, as well as in the general population.

Description: It was demonstrated previously that polar and non-polar surface extracts of the brown alga Fucus vesiculosus collected during winter from the Kiel Bight (Germany) inhibited bacterial attachment at natural concentrations. The present study describes the bioassay-guided identification of the active metabolites from the polar fraction. Chromatographic separation on a size-exclusion liquid chromatography column and bioassays identified an active fraction that was further investigated using nuclear magnetic resonance spectroscopy and mass spectrometry. This fraction contained the metabolites dimethylsulphopropionate (DMSP), proline and alanine. DMSP and proline caused the anti-attachment activity. The metabolites were further quantified on the algal surface together with its associated boundary layer. DMSP and proline were detected in the range 0.12–1.08 ng cm−2 and 0.09–0.59 ng cm−2, respectively. These metabolites were tested in the concentration range from 0.1 to 1000 ng cm−2 against the attachment of five bacterial strains isolated from algae and sediment co-occurring with F. vesiculosus. The surface concentrations for 50% inhibition of attachment of these strains were always 〈0.38 ng cm−2 for DMSP and in four cases 〈0.1 ng cm−2 for proline, while one strain required 1.66 ng cm−2 of proline for 50% inhibition. Two further bacterial strains that had been directly isolated from F. vesiculosus were also tested, but proved to be the least sensitive. This study shows that DMSP and proline have an ecologically relevant role as surface inhibitors against bacterial attachment on F. vesiculosus.

Description: Bacteria associated with Fucus vesiculosus and Delesseria sanguinea, two macroalgae from the Kiel Fjord were investigated seasonally over two years by cultivation-based methods. A total of 166 bacterial strains were isolated from the macroalgae, affiliated to seven classes of bacteria (Actinobacteria, Bacilli, Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Cytophagia and Flavobacteria). According to 16S rRNA gene sequence similarities they were arranged in 82 phylotypes of〉99.0% sequence identity. Assuming that chemical factors rule the bacteriamacroalga and bacteriabacteria interactions on algal surfaces, we tested the antibiotic activity of the bacterial isolates not only against a panel of four standard test organisms (Bacillus subtilis, Candida glabrata, Escherichia coli and Staphylococcus lentus) but also four macroalga-associated microorganisms: Algicola bacteriolytica and Pseudoalteromonas elyakovii (macroalgal pathogens), and Bacillus algicola and Formosa algae (strains associated with algal surfaces). Organic extracts of more than 51% of the isolates from the two macroalgae inhibited the growth of at least one of the tested microorganisms. As much as 46% and 45% of the isolates derived from F. vesiculosus and D. sanguinea, respectively, showed antimicrobial activity against the set of macroalga-associated bacteria, compared with 13 and 19% against a standard set of microorganisms. High antibacterial activity against macroalgal pathogens and bacterial competitors support the assumption that complex chemical interactions shape the relationships of bacteria associated with macroalgae and suggest that these bacteria are a rich source of antimicrobial metabolites.

Description: Two brachyurans of the varunid genus Hemigrapsus from the northwestern Pacific Ocean have invaded coastal regions of the north Atlantic – Hemigrapsus takanoi (sibling species of Hemigrapsus penicillatus) and Hemigrapsus sanguineus in Europe and the latter in the USA. Parasites are known from these crabs in their native habitats, but except for an undescribed larval nematode, none has been found in those examined from their new locations. These parasites include metacercariae of eight species of microphallid trematode, the rhizocephalan barnacles Polyascus polygenea, Sacculina nigra and Sacculina senta, and the obligate gut-inhabiting mesomycetozoan Enteromyces callianassae (potential parasite). The following have been identified in four of the other eight Pacific crabs within the genus (Hemigrapsus nudus and Hemigrapsus oregonensis, northern hemisphere; Hemigrapsus crenulatus and Hemigrapsus sexdentatus, southern hemisphere), none of which have been geographically displaced: metacercariae of two microphallid trematodes; cystacanths of three acanthocephalans Profilicollis antarcticus, Profilicollis botulus and Profilicollis novaezelandensis; larval nematode Ascarophis sp.; nematomorph Nectonema zealandica; entoniscid isopod Portunion conformis; mesomycetozoan Taeniella carcini; and nemertean egg predator Carcinonemertes epialti. The likelihood of the displaced species of shore crabs being rejoined with their native parasites or their susceptibility to becoming infected by similar parasites in their new locations is discussed. In future global displacements of parasitized Hemigrapsus species it is possible that their most serious parasites, rhizocephalans and entoniscid isopods, may infect previously uninfected species. For example, the two eastern Pacific species of Hemigrapsus (H. nudus and H. oregonensis) may be vulnerable to the rhizocephalans and may in turn be a source of entoniscids transported elsewhere.

Description: In this study the antifouling activity was investigated of a series of chemically related, halogenated furanones isolated from Delisea pulchra (Greville) Montagne, a red alga which is rarely fouled in the field. The metabolites were tested in laboratory assays against representatives of the three major groups of fouling organisms, the barnacle Baianus amphitrite amphitirite Darwin, the macroalga Ulva lactuca Linnaeus and a marine bacterium (strain SW 8). Settlement of barnacle cyprid larvae was strongly inhibited, with an EC50 of 〈 25 ng·mr1 (25 ppb) for some compounds. The settlement and growth of algal gametes was also strongly inhibited, in some cases at concentrations as low as 25 ng·cm-2 • Growth of the marine bacterium SW8 was inhibited more strongly than by the common antibiotic gentamicin. Overall, activity of the D. pulchra metabolites was comparable to that of the heavy metals and biocides currently used in antifouling paints. However, no single compound was most active in all tests and some metabolites effective against one organism showed Iittle or no activity a·gainst the others. The high but variable level of activity of the D. pulchra metabolites, coupled with their small size, relative stability, and ability tobe synthesized suggest their potential use as active ingredients in antifouling coatings.

Description: Beaks of 133 specimens of Todarodes sagittatus caught in the central East Atlantic were studied. Relationships between several measurements of the upper and lower beaks and dorsal mantle length (DML) and total mass were calculated. The darkening process or pigmentation of both beaks was investigated and a qualitative scale of eight degrees of pigmentation developed. Except for the hood of the lower beak, the growth of both beaks was allometrically negative in relation to DML in males, whereas the growth of several parts of both beaks of females was allometrically positive. The hood grew faster than all other parts of the male beak and faster than all parts of the lower beak of females. Regression coefficients calculated for the growth of the beaks revealed differences between the growth patterns of females and males (p 〈 0.05). The results relating to darkening and the maturing process suggest that they are related and that they take place over a very short period in the life of the squid.

Description: The free surface version of the GFDL model is used to study inflow and outflow through the Danish Straits, which connect the Baltic with the North Sea. Three problems are addressed: (i) the piling up of inflowing water in the Arkona basin; (ii) the transport ratios between Belt and Sound; (iii) the dominance of hydraulic or geostrophic control. Model results show that a cyclonic eddy (dome) is formed by the inflowing saline water that prevents this water from passing rapidly into the Bornholm basin. This eddy is enforced with increasing inflow due to a sea level difference between Kattegat and western Baltic. If density gradients along the straits are weak and the flow is dominantly driven by sea level differences between Kattegat and Baltic, the well-known ratio of 70% : 30% for the transports through Belt and Sound are confirmed. Strong density gradients can change this ratio considerably, especially in the outflow case, when the light water of the Baltic flows against the heavier water of the Kattegat. Under variable wind conditions, no fixed ratio is found. The flow in the Straits is geostrophically controlled; however, the strong baroclinic density field does not allow us to derive the transport simply from sea level inclination.

Description: To study the variability of the thermohaline circulation in the North Atlantic on decadal time scales, the atmospheric regional model REMO is currently investigated as a component of a fully-coupled atmosphere–ice–ocean model for the Arctic/North Atlantic. A comparison of a 5-year uncoupled simulation of the regional model with a 5-year NCEP/NCAR reanalysis period is carried out in order to assess the performance of the regional model in polar and subpolar regions. The model simulates basic structures realistically. It performs well in middle latitudes but shows some problems in the region of the marginal ice zone and in continental regions with extreme temperature amplitudes. The high elevations of Greenland in the central part of the model domain give rise to problems in the model dynamics, resulting in moderate deviations from NCEP/NCAR reanalysis.

Description: A number of studies are providing increasing genomic and transcriptomic information on the molecular components of transport, and biochemical control in the cell biology of calcification in coccolithophores. In this review we summarise recent evidence for molecular components involved in the trans-cellular transport of Ca2+, inorganic carbon and H+ between the external medium and the intracellular calcification compartment. We present new hypotheses for the transport of substrates to the site of calcification and for the removal of products, highlighting key gaps in our current knowledge. We also discuss how a cellular and molecular approach will improve abilities to understand and predict responses and adaptation to changing ocean chemistry of this important group of microorganisms.

Description: The study presents results on the composition and vertical distribution of the near-bottom plankton community at an abyssal site in the NE Atlantic. Plankton samples were collected at 1, 15, 50 and 100 m above bottom (mab). Whereas the composition within the upper three layers was very similar, a major shift occurred in the immediate vicinity of the seafloor. Between 100 and 15 mab, the plankton was dominated by Copepoda, making up more than 75% of the total abundance and biomass (without gelatinous organisms). At 1 mab, Copepoda were still abundant, but their share decreased to ca. 50%, while Polychaeta, Malacostraca and Chaetognatha became important groups. Within the Copepoda, the predominance of the genus Metridia (Calanoida) in the upper layers was replaced by the genus Benthomisophria (Misophrioida) at 1 mab. Despite enrichment in organic particles towards the bottom, the total abundance and biomass of plankton did not show marked differences between the four layers investigated. Several hypotheses are discussed which may explain why the presumably higher food concentrations near the deep-sea floor do not lead to increased standing stocks of the plankton community.

Description: A comparative study about the removability of four potentially harmful ozone-produced oxidants (free bromine, bromamines, free chlorine and chloramines) by activated carbon filtration was performed under identical conditions in small-scale filter experiments. Removability was high and similar among the oxidants with the exception of chloramines which showed the least removability. Results proved activated carbon filtration to be very efficient in removing the dominating brominated oxides formed during the ozonation of natural and most artificial seawaters. In contrast, removability of chloramines, sometimes present in ozonated bromide-free artificial saltwater, was shown to be significantly lower. To improve removal of persistent chloramines by activated carbon filtration, a comparative evaluation of 3 different activated carbon types was conducted. Granulated activated carbon on coal basis was suggested to be the most cost-effective carbon for removing chloramines as it possessed highest removal capacity, while being the cheapest of the carbons tested.

Description: Subtle sexual dimorphism and its perception in apparently monomorphic bird species warrant assessment of how birds identify the sex of conspecifics, particularly of prospective mates. Visual sensitivity and its potential co-variation with cryptic sexual dichromatism are still uninvestigated in most avian taxa. Using molecular sexing, reflectance spectrometry and perceptual modelling based on the sequencing of short wavelength visual pigments, we assessed the sex-specificity of coloration and colour perception in the red-tailed tropicbird Phaethon rubricauda. We also measured morphological dimorphism at a previously unstudied breeding locality for this species. Our data are in line with both physical and avian-perceived monochromatism with a potential indication of achromatic sex differences in plumage reflectance. The moderate extent of size dimorphism is consistent with reports from other Pacific breeding populations, and morphological measurements from live specimens in this study are in line with reports on museum specimens from the same sample location. Potential differences between individuals of the same sex in size and coloration warrant the assessment of sexual dimorphism in larger sample sizes of this species.

Description: Altered lavas have been dredged from three locations on the Resolution Ridge, west of New Zealand's South Island. On the basis of whole-rock geochemistry, Sr, Nd and Pb isotope data and Ar–Ar ages, they can be divided into two suites: 62–60 Ma enriched mid-ocean ridge basalt (E-MORB), and 57 Ma trachybasalt and trachyandesite of ocean island basalt (OIB) affinity. The E-MORBs from the Resolution Ridge are only the second place from which Tasman Sea abyssal oceanic crust has ever been sampled, they have Indian MORB-like isotope compositions, and their ages support a recent interpretation of a 100 km sinistral offset of the southern part of the Tasman Sea spreading ridge. The slightly younger OIB suite erupted shortly after oceanic crust formation and has FOZO to HIMU source characteristics similar to the well-known SW Pacific Diffuse Alkaline Magmatic Province (DAMP). The close occurrence and isotopic mixing relationships of both Paleocene volcanic suites on the Resolution Ridge may be explained by a heterogeneous upper mantle in which the more fertile OIB component was extracted during a later melting event away from the spreading ridge. The dredged lavas predate formation of Southeast Tasman oceanic crust that borders the Resolution Ridge to the south.

Description: We compared pelagic copepod communities at three (400+ m) stations adjacent to Scott Reef (14°S), a shelf-break reef in Australia's Indian Ocean territory, with those within the shallow (c.50 m) atoll lagoon. The metazooplankton assemblage sampled by our 100-μm multinet system was dominated by small (〈 1.0 mm) copepods. We identified over 220 copepod species, belonging to five of the nine orders. Of these, 68 (31%) are new records for Australian waters and at least 14 are likely to be undescribed. Redundancy analysis indicated that depth stratum was the most important determinant of community structure: distinct communities were associated with the epipelagic (within which the atoll lagoon community was further distinguished by reef-associated copepods), the chlorophyll maximum/thermocline, the upper mesopelagic and the hyper-benthos. The family Oncaeidae was highly speciose (〉 52 taxa) and progressively more important with increasing depth.