ALBERT

Description: Owing to the turbulent nature of the ocean, mesoscale eddies are omnipresent. The impact of these transitory and approximately circular sea surface temperature fronts on the overlying atmosphere is not well known. Stationary fronts such as the Gulf Stream have been reported to lead to pronounced atmospheric changes1, 2. However, the impact of transient ocean eddies on the atmosphere has not been determined systematically, except on winds and to some extent clouds3, 4, 5, 6. Here, we examine the atmospheric conditions associated with over 600,000 individual eddies in the Southern Ocean, using satellite data. We show that ocean eddies locally affect near-surface wind, cloud properties and rainfall. The observed pattern of atmospheric change is consistent with a mechanism in which sea surface temperature anomalies associated with the oceanic eddies modify turbulence in the atmospheric boundary layer. In the case of cyclonic eddies, this modification triggers a slackening of near-surface winds, a decline in cloud fraction and water content, and a reduction in rainfall. We conclude that transient mesoscale ocean structures can significantly affect much larger atmospheric low-pressure systems that swiftly pass by at the latitudes investigated.

Description: The exponentially increasing number of sequenced genomes necessitates fast, accurate, universally applicable and automated approaches for the delineation of prokaryotic species. We developed specI (species identification tool; http://www.bork.embl.de/software/specI/), a method to group organisms into species clusters based on 40 universal, single-copy phylogenetic marker genes. Applied to 3,496 prokaryotic genomes, specI identified 1,753 species clusters. Of 314 discrepancies with a widely used taxonomic classification, 〉62% were resolved by literature support.

Description: The mammalian gastrointestinal tract, the site of digestion and nutrient absorption, harbors trillions of beneficial commensal microbes from all three domains of life. Commensal bacteria, in particular, are key participants in the digestion of food, and are responsible for the extraction and synthesis of nutrients and other metabolites that are essential for the maintenance of mammalian health. Many of these nutrients and metabolites derived from commensal bacteria have been implicated in the development, homeostasis and function of the immune system, suggesting that commensal bacteria may influence host immunity via nutrient- and metabolite-dependent mechanisms. Here we review the current knowledge of how commensal bacteria regulate the production and bioavailability of immunomodulatory, diet-dependent nutrients and metabolites and discuss how these commensal bacteria–derived products may regulate the development and function of the mammalian immune system.

Description: In bacteria, foreign nucleic acids are silenced by clustered, regularly interspaced, short palindromic repeats (CRISPR)--CRISPR-associated (Cas) systems. Bacterial type II CRISPR systems have been adapted to create guide RNAs that direct site-specific DNA cleavage by the Cas9 endonuclease in cultured cells. Here we show that the CRISPR-Cas system functions in vivo to induce targeted genetic modifications in zebrafish embryos with efficiencies similar to those obtained using zinc finger nucleases and transcription activator-like effector nucleases.

Description: Population genomics — in which genetic variation across the genome is studied in many individuals — has so far been limited to species for which reference genomes are available. A recent study shows how transcriptomics can be used to extend population genomics research across a far greater range of organisms. This advance promises important new insights int…

Description: The Denmark Strait Overflow (DSO) supplies about one-third of the North Atlantic Deep Water and is critical to global thermohaline circulation. Knowledge of the pathways of DSO through the Irminger Basin and its transformation there is still incomplete, however. The authors deploy over 10 000 Lagrangian particles at the Denmark Strait in a high-resolution ocean model to study these issues. First, the particle trajectories show that the mean position and potential density of dense waters cascading over the Denmark Strait sill evolve consistently with hydrographic observations. These sill particles transit the Irminger Basin to the Spill Jet section (65.25°N) in 5–7 days and to the Angmagssalik section (63.5°N) in 2–3 weeks. Second, the dense water pathways on the continental shelf are consistent with observations and particles released on the shelf in the strait constitute a significant fraction of the dense water particles recorded at the Angmagssalik section within 60 days (~25%). Some particles circulate on the shelf for several weeks before they spill off the shelf break and join the overflow from the sill. Third, there are two places where the water density following particle trajectories decreases rapidly due to intense mixing: to the southwest of the sill and southwest of the Kangerdlugssuaq Trough on the continental slope. After transformation in these places, the overflow particles exhibit a wide range of densities.

Description: Many marine sponges are hosts to dense and phylogenetically diverse microbial communities that are located in the extracellular matrix of the animal. The candidate phylum Poribacteria is a predominant member of the sponge microbiome and its representatives are nearly exclusively found in sponges. Here we used single-cell genomics to obtain comprehensive insights into the metabolic potential of individual poribacterial cells representing three distinct phylogenetic groups within Poribacteria. Genome sizes were up to 5.4 Mbp and genome coverage was as high as 98.5%. Common features of the poribacterial genomes indicated that heterotrophy is likely to be of importance for this bacterial candidate phylum. Carbohydrate-active enzyme database screening and further detailed analysis of carbohydrate metabolism suggested the ability to degrade diverse carbohydrate sources likely originating from seawater and from the host itself. The presence of uronic acid degradation pathways as well as several specific sulfatases provides strong support that Poribacteria degrade glycosaminoglycan chains of proteoglycans, which are important components of the sponge host matrix. Dominant glycoside hydrolase families further suggest degradation of other glycoproteins in the host matrix. We therefore propose that Poribacteria are well adapted to an existence in the sponge extracellular matrix. Poribacteria may be viewed as efficient scavengers and recyclers of a particular suite of carbon compounds that are unique to sponges as microbial ecosystems.

Description: Amplified marker-gene sequences can be used to understand microbial community structure, but they suffer from a high level of sequencing and amplification artifacts. The UPARSE pipeline reports operational taxonomic unit (OTU) sequences with ≤1% incorrect bases in artificial microbial community tests, compared with 〉3% incorrect bases commonly reported by other methods. The improved accuracy results in far fewer OTUs, consistently closer to the expected number of species in a community.

Description: Quantile mapping is routinely applied to correct biases of regional climate model simulations compared to observational data. If the observations are of similar resolution as the regional climate model, quantile mapping is a feasible approach. However, if the observations are of much higher resolution, quantile mapping also attempts to bridge this scale mismatch. Here, it is shown for daily precipitation that such quantile mapping-based downscaling is not feasible but introduces similar problems as inflation of perfect prognosis ("prog") downscaling: the spatial and temporal structure of the corrected time series is misrepresented, the drizzle effect for area means is overcorrected, area-mean extremes are overestimated, and trends are affected. To overcome these problems, stochastic bias correction is required.

Description: The climatic changes of the glacial cycles are thought to have been a major driver of population declines and species extinctions. However, studies to date have focused on terrestrial fauna and there is little understanding of how marine species responded to past climate change. Here we show that a true Arctic species, the bowhead whale (Balaena mysticetus), shifted its range and tracked its core suitable habitat northwards during the rapid climate change of the Pleistocene–Holocene transition. Late Pleistocene lineages survived into the Holocene and effective female population size increased rapidly, concurrent with a threefold increase in core suitable habitat. This study highlights that responses to climate change are likely to be species specific and difficult to predict. We estimate that the core suitable habitat of bowhead whales will be almost halved by the end of this century, potentially influencing future population dynamics.

Description: Ocean acidification, caused by the uptake of anthropogenic carbon dioxide, is a significant stressor to marine life. Ulf Riebesell charts the rapid rise in ocean acidification research, from the discovery of its adverse effects to its entry into the political consciousness.

Description: Previous attempts to derive the depth-dependent expression of the radiation stress have lead to a debate concerning (i) the applicability of Mellor’s approach to a sloping bottom, (ii) the introduction of the delta function at the mean sea surface in the later papers by Mellor, and (iii) a wave-induced pressure term derived in several recent studies. The authors use an equation system in vertically Lagrangian and horizontally Eulerian (VL) coordinates suitable for a concise treatment of the surface boundary, and obtain an expression for the depth-dependent radiation stress that is consistent with the vertically-integrated expression given by Longuet-Higgins and Stewart. Concerning (i)-(iii) in the above, the difficulty of handling a sloping bottom disappears when wave-averaged momentum equations in the VL coordinates are written for the development of (not the Lagrangian mean velocity but) the Eulerian mean velocity. There is also no delta function at the sea surface in the expression for the depth-dependent radiation stress. The connection between the wave-induced pressure term in the recent studies and the depth-dependent radiation stress term is easily shown by rewriting the pressure-based form stress term in the thickness-weighted-mean (TWM) momentum equations as a velocity-based term which contains the time derivative of the pseudomomentum in the TWM framework.

Description: The upper ocean, including the biologically productive euphotic zone and the mixed layer, has great relevance for studies of physical, biogeochemical, and ecosystem processes and their interaction. Observing this layer with a continuous presence, sampling many of the relevant variables, and with sufficient vertical resolution, has remained a challenge. Here a system is presented which can be deployed on the top of deep-ocean moorings, with a drive mechanism at depths of 150-200m, which mechanically winches a large sensor float and smaller communications float tethered above it to the surface and back down again, typically twice per day for periods up to 1 year. The sensor float can carry several sizeable sensors, and it has enough buoyancy to reach the near surface and for the communications float to pierce the surface even in the presence of strong currents. The system can survive mooring blow-over to 1000m depth. The battery-powered design is made possible by using a balanced energy-conserving principle. Reliability is enhanced with a drive assembly that employs a single rotating part that has no slip rings or rotating seals. The profiling bodies can break the surface to sample the near-surface layer and to establish satellite communication for data relay or reception of new commands. An inductive pass-through mode allows communication with other mooring components throughout the water column beneath the system. A number of successful demonstration deployments have been completed.

Description: In recent years, profiling floats, which form the basis of the successful international Argo observatory, are also being considered as platforms for marine biogeochemical research. This study showcases the utility of floats as a novel tool for combined gas measurements of CO2 partial pressure (pCO2) and O2. These float prototypes were equipped with a small-sized and submersible pCO2 sensor and an optode O2 sensor for high resolution measurements in the surface ocean layer. Four consecutive deployments were carried out during Nov. 2010 and June 2011 near the Cape Verde Ocean Observatory (CVOO) in the eastern tropical North Atlantic. The profiling float performed upcasts every 31 h while measuring pCO2, O2, salinity, temperature and hydrostatic pressure in the upper 200 m of the water column. In order to maintain accuracy, regular pCO2 sensor zeroings at depth and surface, as well as optode measurements in air, were performed for each profile. Through the application of data processing procedures (e.g., time-lag correction) accuracies of float-borne pCO2 measurements were greatly improved (10 – 15 μatm for water column and 5 μatm for surface measurements). O2 measurements yielded an accuracy of 2 μmol kg−1. First results of this pilot study show the possibility of using profiling floats as a platform for detailed and unattended observations of the marine carbon and oxygen cycle dynamics.

Description: Sediment-hosting hydrothermal systems in the Okinawa Trough maintain a large amount of liquid, supercritical and hydrate phases of CO2 in the seabed. The emission of CO2 may critically impact the geochemical, geophysical and ecological characteristics of the deep-sea sedimentary environment. So far it remains unclear whether microbial communities that have been detected in such high-CO2 and low-pH habitats are metabolically active, and if so, what the biogeochemical and ecological consequences for the environment are. In this study, RNA-based molecular approaches and radioactive tracer-based respiration rate assays were combined to study the density, diversity and metabolic activity of microbial communities in CO2-seep sediment at the Yonaguni Knoll IV hydrothermal field of the southern Okinawa Trough. In general, the number of microbes decreased sharply with increasing sediment depth and CO2 concentration. Phylogenetic analyses of community structure using reverse-transcribed 16S ribosomal RNA showed that the active microbial community became less diverse with increasing sediment depth and CO2 concentration, indicating that microbial activity and community structure are sensitive to CO2 venting. Analyses of RNA-based pyrosequences and catalyzed reporter deposition-fluorescence in situ hybridization data revealed that members of the SEEP-SRB2 group within the Deltaproteobacteria and anaerobic methanotrophic archaea (ANME-2a and -2c) were confined to the top seafloor, and active archaea were not detected in deeper sediments (13–30 cm in depth) characterized by high CO2. Measurement of the potential sulfate reduction rate at pH conditions of 3–9 with and without methane in the headspace indicated that acidophilic sulfate reduction possibly occurs in the presence of methane, even at very low pH of 3. These results suggest that some members of the anaerobic methanotrophs and sulfate reducers can adapt to the CO2-seep sedimentary environment; however, CO2 and pH in the deep-sea sediment were found to severely impact the activity and structure of the microbial community.

Description: Oxygen minimum zones are expanding globally, and at present account for around 20–40% of oceanic nitrogen loss. Heterotrophic denitrification and anammox—anaerobic ammonium oxidation with nitrite—are responsible for most nitrogen loss in these low-oxygen waters. Anammox is particularly significant in the eastern tropical South Pacific, one of the largest oxygen minimum zones globally. However, the factors that regulate anammox-driven nitrogen loss have remained unclear. Here, we present a comprehensive nitrogen budget for the eastern tropical South Pacific oxygen minimum zone, using measurements of nutrient concentrations, experimentally determined rates of nitrogen transformation and a numerical model of export production. Anammox was the dominant mode of nitrogen loss at the time of sampling. Rates of anammox, and related nitrogen transformations, were greatest in the productive shelf waters, and tailed off with distance from the coast. Within the shelf region, anammox activity peaked in both upper and bottom waters. Overall, rates of nitrogen transformation, including anammox, were strongly correlated with the export of organic matter. We suggest that the sinking of organic matter, and thus the release of ammonium into the water column, together with benthic ammonium release, fuel nitrogen loss from oxygen minimum zones.

Description: The use of a coupled ocean/atmosphere/sea-ice model to hindcast (i.e. historical forecast) recent climate variability is described and illustrated for the cases of the 1976/77 and 1998/99 climate shift events in the Pacific. The initialization is achieved by running the coupled model in partially coupled mode whereby global observed wind stress anomalies are used to drive the ocean/sea-ice component of the coupled model while maintaining the thermodynamic coupling between the ocean/sea-ice and atmosphere components. Here we show that hindcast experiments can successfully capture many features associated with the 1976/77 and 1998/99 climate shifts. For instance, hindcast experiments started from the beginning of 1976 can capture sea surface temperature (SST) warming in the central-eastern equatorial Pacific and the positive phase of the Pacific Decadal Oscillation (PDO) throughout the 9 years following the 1976/77 climate shift, including the deepening of the Aleutian low pressure system. Hindcast experiments started from the beginning of 1998 can also capture part of the anomalous conditions during the 4 years after the 1998/99 climate. We argue that the dynamical adjustment of heat content anomalies that are present in the initial conditions in the tropics is important for the successful hindcast of the two climate shifts.

Description: Prokaryote communities were investigated on the seasonally stratified Alaska Beaufort Shelf (ABS). Water and sediment directly underlying water with origin in the Arctic, Pacific or Atlantic oceans were analyzed by pyrosequencing and length heterogeneity-PCR in conjunction with physicochemical and geographic distance data to determine what features structure ABS microbiomes. Distinct bacterial communities were evident in all water masses. Alphaproteobacteria explained similarity in Arctic surface water and Pacific derived water. Deltaproteobacteria were abundant in Atlantic origin water and drove similarity among samples. Most archaeal sequences in water were related to unclassified marine Euryarchaeota. Sediment communities influenced by Pacific and Atlantic water were distinct from each other and pelagic communities. Firmicutes and Chloroflexi were abundant in sediment, although their distribution varied in Atlantic and Pacific influenced sites. Thermoprotei dominated archaea in Pacific influenced sediments and Methanomicrobia dominated in methane-containing Atlantic influenced sediments. Length heterogeneity-PCR data from this study were analyzed with data from methane-containing sediments in other regions. Pacific influenced ABS sediments clustered with Pacific sites from New Zealand and Chilean coastal margins. Atlantic influenced ABS sediments formed another distinct cluster. Density and salinity were significant structuring features on pelagic communities. Porosity co-varied with benthic community structure across sites and methane did not. This study indicates that the origin of water overlying sediments shapes benthic communities locally and globally and that hydrography exerts greater influence on microbial community structure than the availability of methane.

Description: One of the most remarkable features of the reproductive systems of eubrachyuran crabs is the presence of specialized organs for sperm storage, the seminal receptacles. Descriptions of seminal receptacle morphology, sperm storage time, sperm retention across molts, and the capacity to store multiple ejaculates from different males can help in understanding crab mating strategies as well as in preventing negative effects of male-biased fisheries of heavily harvested species. Metacarcinus edwardsii is the most harvested crab in Chile, but its reproductive biology is largely unstudied. In this study, the morphology of the seminal receptacles of M. edwardsii is characterized from the macroscopic to the microscopic level, during key points in the reproductive cycle. The receptacles of experimentally mated and wild-caught females were included in this analysis. Metacarcinus edwardsii has ventral-type seminal receptacles that are able to retain sperm after molting, and even after extrusion of the eggs. Stratification of multiple ejaculates is clearly observed. In general, the pattern of sperm storage indicates that populations of this species, like those of other cancrid crabs, could have high resilience to the negative effects of the selective harvest of males, principally because females have a great sperm storage capacity.

Description: Larval stages are considered as the weakest link when a species is exposed to challenging environmental changes1, 2. Reduced rates of growth and development in larval stages of calcifying invertebrates in response to ocean acidification might be caused by energetic limitations3. So far no information exists on how ocean acidification affects digestive processes in marine larval stages. Here we reveal alkaline (~pH 9.5) conditions in the stomach of sea urchin larvae. Larvae exposed to decreased seawater pH suffer from a drop in gastric pH, which directly translates into decreased digestive efficiencies and triggers compensatory feeding. These results suggest that larval digestion represents a critical process in the context of ocean acidification, which has been overlooked so far.

Description: The concentration of sulphate in today’s oceans—approximately 28,000 μmol l−1—is maintained by a balance between removal by pyrite burial and evaporite deposition and supply by oxidative weathering and the erosion of sulphate minerals from evaporites1. Oceanic sulphate concentrations were much lower before the rise of atmospheric oxygen about 2.4 Gyr ago2. The limited spread of δ34S values in sedimentary sulphides from 3.85 to 2.5 Gyr ago suggests that microbial sulphate reduction, if it played an important role in the Archaean marine sulphur cycle, must have occurred at sulphate concentrations of 200 μmol l−1 or less3. Here we use sulphur isotope systematics of the 2.7 Gyr old volcanogenic massive sulphide ore deposits from Kidd Creek, Ontario, to provide constraints on seawater sulphate concentrations independent of biological considerations. By comparing these values with metal and sulphur budgets from modern hydrothermal settings, we estimate that seawater sulphate concentrations 2.7 Gyr ago were roughly 80 μmol l−1. At these levels, the residence time of sulphate was on the order of 200,000 years, sufficiently long to make sulphate a conservative compound in the open ocean, but still short enough to suggest that hydrothermal sulphur fluxes were accompanied by a globally significant sink associated with microbial sulphate reduction.

Description: The Arctic continental shelf seas hold a globally significant source of freshwater that impacts Arctic Ocean stratification, circulation, and climate. This freshwater can be injected below the surface mixed layer by intense turbulent kinetic energy dissipation events, as resolved by Laptev Sea microstructure observations. The tides provide a major source of energy that can be dissipated and hence drive diapycnal mixing in the Laptev Sea. Multiyear ADCP mooring records from locations across the shelf reveal that semidiurnal tides are dominated by theM2 and S2 constituents, with the largest amplitudes on the outer shelf. Throughoutmost of the shelf, tides are clockwise polarized and sheared by stratification, as characteristic near the M2 critical latitude. Interannual variations of the tidal and shear structures on the inner shelf aremainly determined by the stratification-setting Lena River freshwater plume. In all locations,M2 tides are enhanced under sea ice, and therefore changes in the seasonal ice cover may lead to changes in tides and water column structure. The main conclusions of this study are that (i) tides play a comparatively greater role year-round on the outer shelf relative to the inner shelf; (ii) a sea ice reduction will overall decrease the predictability of the currents, especially on the inner shelf; and (iii) the freshwater distribution directly impacts diapycnal mixing by setting the vertical tidal structure. These combined effects imply that future sea ice loss will increase the variability and vertical mixing of freshwater, particularly on the inner shelf, where the Lena River first enters the Laptev Sea.

Description: The Canary Island Seamount Province forms a scattered hotspot track on the Atlantic ocean floor ,1300 km long and,350 km wide, perpendicular to lithospheric fractures, and parallel to theNWAfrican continental margin. New 40Ar/39Ar datings show that seamount ages vary from 133 Ma to 0.2 Ma in the central archipelago, and from 142 Ma to 91 Ma in the southwest. Combining 40Ar/39Ar ages with plate tectonic reconstructions, I find that the temporal and spatial distribution of seamounts is irreconcilable with a deep fixed mantle plume origin, or derivation from passive mantle upwelling beneath a mid-ocean ridge. I conclude that shallow mantle upwelling beneath the Atlantic Ocean basin off the NW African continental lithosphere flanks produced recurrent melting anomalies and seamounts from the Late Jurassic to Recent, nominating the Canary Island Seamount Province as oldest hotspot track in the Atlantic Ocean, and most long-lived preserved on earth.

Description: Half of the microbial cells in the Earth’s oceans are found in sediments1. Many of these cells are members of the Archaea2, single-celled prokaryotes in a domain of life separate from Bacteria and Eukaryota. However, most of these archaea lack cultured representatives, leaving their physiologies and placement on the tree of life uncertain. Here we show that the uncultured miscellaneous crenarchaeotal group (MCG) and marine benthic group-D (MBG-D) are among the most numerous archaea in the marine sub-sea floor. Single-cell genomic sequencing of one cell of MCG and three cells of MBG-D indicated that they form new branches basal to the archaeal phyla Thaumarchaeota3 and Aigarchaeota4, for MCG, and the order Thermoplasmatales, for MBG-D. All four cells encoded extracellular protein-degrading enzymes such as gingipain and clostripain that are known to be effective in environments chemically similar to marine sediments. Furthermore, we found these two types of peptidase to be abundant and active in marine sediments, indicating that uncultured archaea may have a previously undiscovered role in protein remineralization in anoxic marine sediments.

Description: A large number of quantities have to be measured and processed to determine the atmospheric-state variables, which are the actual measurands, from aircraft-based measurements. A great part of the dependencies between these quantities depends on the aerodynamic state of the aircraft. Aircraft-based meteorological measurements, hence, require in-flight calibration. Most operators of research aircraft perform some kind of calibration, but the schemes used and the degree they are documented greatly vary. The flight maneuvers and calculation methods required, however, are published in a number of partly overlapping and partly contradictory publications. Some methods are only presented as a minor issue in publications mainly focused on atmospheric processes and are therefore hard to find. For an aircraft user, it is hence challenging to either perform or verify a calibration because of missing comprehensive guidance. This lack was stated on occasion of the in-flight calibration of the German research aircraft Polar5 carried out for the field experiment Investigation of Katabatic Winds and Polynyas during Summer (IKAPOS). In the present paper, a comprehensive review of the existing literature on this field and a practical guide to the wind calibration of a research aircraft to be used for turbulent flux measurements are given.

Description: Most of the marine biotic crises that occurred during the hot Mesozoic era have been linked to episodes of extreme warmth(1,2). Others, however, may have occurred during cooler intervals that interrupted Cretaceous greenhouse warmth(3-5). There are some indications of cooling in the late Aptian(6-8) (116-114 Myr ago), but it has not been definitively linked to biotic crisis. Here we assess the timing and magnitude of late Aptian cooling and its association with biotic crises using a suite of geochemical and micropalaeontological assessments from a marine sediment core from the North Atlantic Ocean as well as global biogeochemical modelling. Sea surface temperatures derived from the TEX86 proxy suggest that surface waters cooled by about 5 degrees C during the two million years, coincident with a positive delta C-13 excursion of approximately 2 parts per thousand in carbonates and organic carbon. Surface productivity was enhanced during this period, but the abundance of planktonic foraminifera and nannoconid phytoplankton declined. Our simulations with a biogeochemical model indicate that the delta C-13 excursion associated with the cooling could be explained by the burial of about 812,000 gigatons of carbon over 2.5 million years. About 50% of the this carbon burial occurred in the Atlantic, Southern and Tethys ocean basins. We conclude that global cooling during greenhouse conditions can cause perturbations to marine ecosystems and biogeochemical cycles at scales comparable to those associated with global warming

Description: A substantial amount of the atmospheric carbon taken up on land through photosynthesis and chemical weathering is transported laterally along the aquatic continuum from upland terrestrial ecosystems to the ocean. So far, global carbon budget estimates have implicitly assumed that the transformation and lateral transport of carbon along this aquatic continuum has remained unchanged since pre-industrial times. A synthesis of published work reveals the magnitude of present-day lateral carbon fluxes from land to ocean, and the extent to which human activities have altered these fluxes. We show that anthropogenic perturbation may have increased the flux of carbon to inland waters by as much as 1.0 Pg C yr−1 since pre-industrial times, mainly owing to enhanced carbon export from soils. Most of this additional carbon input to upstream rivers is either emitted back to the atmosphere as carbon dioxide (~0.4 Pg C yr−1) or sequestered in sediments (~0.5 Pg C yr−1) along the continuum of freshwater bodies, estuaries and coastal waters, leaving only a perturbation carbon input of ~0.1 Pg C yr−1 to the open ocean. According to our analysis, terrestrial ecosystems store ~0.9 Pg C yr−1 at present, which is in agreement with results from forest inventories but significantly differs from the figure of 1.5 Pg C yr−1 previously estimated when ignoring changes in lateral carbon fluxes. We suggest that carbon fluxes along the land–ocean aquatic continuum need to be included in global carbon dioxide budgets.

Description: Microbial activity is a fundamental component of oceanic nutrient cycles. Photosynthetic microbes, collectively termed phytoplankton, are responsible for the vast majority of primary production in marine waters. The availability of nutrients in the upper ocean frequently limits the activity and abundance of these organisms. Experimental data have revealed two broad regimes of phytoplankton nutrient limitation in the modern upper ocean. Nitrogen availability tends to limit productivity throughout much of the surface low-latitude ocean, where the supply of nutrients from the subsurface is relatively slow. In contrast, iron often limits productivity where subsurface nutrient supply is enhanced, including within the main oceanic upwelling regions of the Southern Ocean and the eastern equatorial Pacific. Phosphorus, vitamins and micronutrients other than iron may also (co-)limit marine phytoplankton. The spatial patterns and importance of co-limitation, however, remain unclear. Variability in the stoichiometries of nutrient supply and biological demand are key determinants of oceanic nutrient limitation. Deciphering the mechanisms that underpin this variability, and the consequences for marine microbes, will be a challenge. But such knowledge will be crucial for accurately predicting the consequences of ongoing anthropogenic perturbations to oceanic nutrient biogeochemistry.

Description: Latimeria chalumnae, a ‘living fossil,’ is of great scientific interest, as it is closely related to the aquatic ancestors of land-living tetrapods. Latimeria show internal fertilization and bear live young, but their reproductive behaviour is poorly known. Here we present for the first time a paternity analysis of the only available material from gravid females and their offspring. We genotype two L. chalumnae females and their unborn brood for 14 microsatellite loci. We find that the embryos are closely related to each other and never show more than three different alleles per locus, providing evidence for a single father siring all of the offspring. We reconstruct the father’s genotype but cannot identify it in the population. These data suggest that coelacanths have a monogamous mating system and that individual relatedness is not important for mate choice.

Description: Accurate projections of stratospheric ozone are required because ozone changes affect exposure to ultraviolet radiation and tropospheric climate. Unweighted multimodel ensemble-mean (uMMM) projections from chemistry–climate models (CCMs) are commonly used to project ozone in the twenty-first century, when ozone-depleting substances are expected to decline and greenhouse gases are expected to rise. Here, the authors address the question of whether Antarctic total column ozone projections in October given by the uMMM of CCM simulations can be improved by using a process-oriented multiple diagnostic ensemble regression (MDER) method. This method is based on the correlation between simulated future ozone and selected key processes relevant for stratospheric ozone under present-day conditions. The regression model is built using an algorithm that selects those process-oriented diagnostics that explain a significant fraction of the spread in the projected ozone among the CCMs. The regression model with observed diagnostics is then used to predict future ozone and associated uncertainty. The precision of the authors’ method is tested in a pseudoreality; that is, the prediction is validated against an independent CCM projection used to replace unavailable future observations. The tests show that MDER has higher precision than uMMM, suggesting an improvement in the estimate of future Antarctic ozone. The authors’ method projects that Antarctic total ozone will return to 1980 values at around 2055 with the 95% prediction interval ranging from 2035 to 2080. This reduces the range of return dates across the ensemble of CCMs by about a decade and suggests that the earliest simulated return dates are unlikely.

Description: Sea surface temperatures in the eastern equatorial Atlantic Ocean are subject to year-to-year variations. Reanalysis data and model simulations suggest that advection of warm water from north of the Equator can drive some of the warm events

Description: Mass coral bleaching, resulting from the breakdown of coral-algal symbiosis has been identified as the most severe threat to coral reef survival on a global scale. Regionally, nutrient enrichment of reef waters is often associated with a significant loss of coral cover and diversity. Recently, increased dissolved inorganic nitrogen concentrations have been linked to a reduction of the temperature threshold of coral bleaching, a phenomenon for which no mechanistic explanation is available. Here we show that increased levels of dissolved inorganic nitrogen in combination with limited phosphate concentrations result in an increased susceptibility of corals to temperature-and light-induced bleaching. Mass spectrometric analyses of the algal lipidome revealed a marked accumulation of sulpholipids under these conditions. Together with increased phosphatase activities, this change indicates that the imbalanced supply of dissolved inorganic nitrogen results in phosphate starvation of the symbiotic algae. Based on these findings we introduce a conceptual model that links unfavourable ratios of dissolved inorganic nutrients in the water column with established mechanisms of coral bleaching. Notably, this model improves the understanding of the detrimental effects of coastal nutrient enrichment on coral reefs, which is urgently required to support knowledge-based management strategies to mitigate the effects of climate change. © 2013 Macmillan Publishers Limited. All rights reserved.

Description: Evidence is presented for the notion that some contribution to the recent decadal trends observed in the Southern Hemisphere, including the lack of a strong Southern Ocean surface warming, may have originated from longer-term internal centennial variability originating in the Southern Ocean. The existence of such centennial variability is supported by the instrumental sea surface temperatures (SSTs), a multimillennial reconstruction of Tasmanian summer temperatures from tree rings, and a millennial control integration of the Kiel Climate Model (KCM). The model variability was previously shown to be linked to changes in Weddell Sea deep convection. During phases of deep convection the surface Southern Ocean warms, the abyssal Southern Ocean cools, Antarctic sea ice extent retreats, and the low-level atmospheric circulation over the Southern Ocean weakens. After the halt of deep convection the surface Southern Ocean cools, the abyssal Southern Ocean warms, Antarctic sea ice expands, and the low-level atmospheric circulation over the Southern Ocean intensifies, consistent with what has been observed during the recent decades. A strong sensitivity of the time scale to model formulation is noted. In the KCM, the centennial variability is associated with global-average surface air temperature (SAT) changes of the order of a few tenths of a degree per century. The model results thus suggest that internal centennial variability originating in the Southern Ocean should be considered in addition to other internal variability and external forcing when discussing the climate of the twentieth century and projecting that of the twenty-first century.

Description: The wintertime northern annular mode (NAM) at the surface is known to undergo slow intraseasonal variations in association with stratospheric variability, which leads the surface signal by up to several weeks. The relative contributions, however, of potentially relevant stratosphere–troposphere coupling mechanisms are not yet fully understood. In this study the relative roles of (i) the downward effect of the zonal-mean secondary circulation induced by quasigeostrophic (QG) adjustment to stratospheric wave drag and radiative damping and (ii) wave drag local to the troposphere are estimated. For this purpose, a spectral tendency equation of the QG zonal-mean zonal wind is derived and used, in a first step, to obtain the external mechanical forcing that, in the QG framework, drives exactly the observed stratospheric and tropospheric daily NAM. In a second step, the equation is then integrated in time to reconstruct the daily NAM, but with the forcing restricted to either stratospheric or tropospheric levels, each case leaving a characteristic NAM surface signal. The relative roles of the above-mentioned mechanisms are found to be of similar quantitative importance, but to differ in a qualitative sense. The downward effect of stratospheric QG adjustment is responsible for the initiation of the NAM surface signal, whereas subsequently local tropospheric wave drag actively maintains and persists the signal over several weeks. Furthermore, the downward effect of QG adjustment to stratospheric radiative damping is shown to have only a minor impact, compared to that from stratospheric wave drag. The robustness of these conclusions is demonstrated by a sensitivity study with respect to various model parameters.

Description: The Agulhas Current plays a crucial role in the thermohaline circulation through its leakage into the South Atlantic. Under both past and present climates, the trade winds and westerlies could have the ability to modulate the amount of Indian-Atlantic inflow. Compelling arguments have been put forward suggesting that trade winds alone have little impact on the magnitude of Agulhas leakage. Here, employing three ocean models for robust analysis – a global coarse resolution, a regional eddy-permitting and a nested high-resolution eddy-resolving configuration – and systematically altering the position and intensity of the westerly wind belt in a series of sensitivity experiments, it is shown that the westerlies, in particular their intensity, control the leakage. Leakage responds proportionally to the westerlies intensity up to a certain point. Beyond this, through the adjustment of the large-scale circulation, energetic interactions occur between the Agulhas Return Current and the Antarctic Circumpolar Current that result in a state where leakage no longer increases. This adjustment takes place within 1 to 2 decades. Contrary to previous assertions, our results further show that an equatorward (poleward) shift in westerlies increases (decreases) leakage. This occurs due to the redistribution of momentum input by the winds. It is concluded that the reported present-day leakage increase could therefore reflect an unadjusted oceanic response mainly to the strengthening westerlies over the last few decades.

Description: Over much of the ocean’s surface, productivity and growth are limited by a scarcity of bioavailable nitrogen. Sedimentary δ15N records spanning the last deglaciation suggest marked shifts in the nitrogen cycle during this time, but the quantification of these changes has been hindered by the complexity of nitrogen isotope cycling. Here we present a database of δ15N in sediments throughout the world’s oceans, including 2,329 modern seafloor samples, and 76 timeseries spanning the past 30,000 years. We show that the δ15N values of modern seafloor sediments are consistent with values predicted by our knowledge of nitrogen cycling in the water column. Despite many local deglacial changes, the globally averaged δ15N values of sinking organic matter were similar during the Last Glacial Maximum and Early Holocene. Considering the global isotopic mass balance, we explain these observations with the following deglacial history of nitrogen inventory processes. During the Last Glacial Maximum, the nitrogen cycle was near steady state. During the deglaciation, denitrification in the pelagic water column accelerated. The flooding of continental shelves subsequently increased denitrification at the seafloor, and denitrification reached near steady-state conditions again in the Early Holocene. We use a recent parameterization of seafloor denitrification to estimate a 30–120% increase in benthic denitrification between 15,000 and 8,000 years ago. Based on the similarity of globally averaged δ15N values during the Last Glacial Maximum and Early Holocene, we infer that pelagic denitrification must have increased by a similar amount between the two steady states.

Description: During the Pleistocene glaciations, Arctic ice sheets on western Eurasia, Greenland and North America terminated at their continental margins. In contrast, the exposed continental shelves in the Beringian region of Siberia are thought to have been covered by a tundra landscape. Evidence of grounded ice on seafloor ridges and plateaux off the coast of the Beringian margin, at depths of up to 1,000 m, have generally been attributed to ice shelves or giant icebergs that spread oceanwards during glacial maxima. Here we identify marine glaciogenic landforms visible in seismic profiles and detailed bathymetric maps along the East Siberian continental margin. We interpret these features, which occur in present water depths of up to 1,200 m, as traces from grounding events of ice sheets and ice shelves. We conclude that the Siberian Shelf edge and parts of the Arctic Ocean were covered by ice sheets of about 1 km in thickness during several Pleistocene glaciations before the most recent glacial period, which must have had a significant influence on albedo and oceanic and atmospheric circulation.

Description: Inteins are rare, translated genetic parasites mainly found in bacteria and archaea, while spliceosomal introns are distinctly eukaryotic features abundant in most nuclear genomes. Using targeted metagenomics, we discovered an intein in an Atlantic population of the photosynthetic eukaryote, Bathycoccus, harbored by the essential spliceosomal protein PRP8 (processing factor 8 protein). Although previously thought exclusive to fungi, we also identified PRP8 inteins in parasitic (Capsaspora) and predatory (Salpingoeca) protists. Most new PRP8 inteins were at novel insertion sites that, surprisingly, were not in the most conserved regions of the gene. Evolutionarily, Dikarya fungal inteins at PRP8 insertion site a appeared more related to the Bathycoccus intein at a unique insertion site, than to other fungal and opisthokont inteins. Strikingly, independent analyses of Pacific and Atlantic samples revealed an intron at the same codon as the Bathycoccus PRP8 intein. The two elements are mutually exclusive and neither was found in cultured Bathycoccus or other picoprasinophyte genomes. Thus, wild Bathycoccus contain one of few non-fungal eukaryotic inteins known and a rare polymorphic intron. Our data indicate at least two Bathycoccus ecotypes exist, associated respectively with oceanic or mesotrophic environments. We hypothesize that intein propagation is facilitated by marine viruses; and, while intron gain is still poorly understood, presence of a spliceosomal intron where a locus lacks an intein raises the possibility of new, intein-primed mechanisms for intron gain. The discovery of nucleus-encoded inteins and associated sequence polymorphisms in uncultivated marine eukaryotes highlights their diversity and reveals potential sexual boundaries between populations indistinguishable by common marker genes. © 2013 International Society for Microbial Ecology.

Description: For the first time in serveral years, the El Nino-Southern Oscillation did not dominate regional climate conditions around the globe. A weak La Ni a dissipated to ENSOneutral conditions by spring, and while El Nino appeared to be emerging during summer, this phase never fully developed as sea surface temperatures in the eastern conditions. Nevertheless, other large-scale climate patterns and extreme weather events impacted various regions during the year. A negative phase of the Arctic Oscillation from mid-January to early February contributed to frigid conditions in parts of northern Africa, eastern Europe, and western Asia. A lack of rain during the 2012 wet season led to the worst drought in at least the past three decades for northeastern Brazil. Central North America also experienced one of its most severe droughts on record. The Caribbean observed a very wet dry season and it was the Sahel's wettest rainy season in 50 years. Overall, the 2012 average temperature across global land and ocean surfaces ranked among the 10 warmest years on record. The global land surface temperature alone was also among the 10 warmest on record. In the upper atmosphere, the average stratospheric temperature was record or near-record cold, depending on the dataset. After a 30-year warming trend from 1970 to 1999 for global sea surface temperatures, the period 2000-12 had little further trend. This may be linked to the prevalence of La Ni a-like conditions during the 21st century. Heat content in the upper 700 m of the ocean remained near record high levels in 2012. Net increases from 2011 to 2012 were observed at 700-m to 2000-m depth and even in the abyssal ocean below. Following sharp decreases in to the effects of La Ni a, sea levels rebounded to reach records highs in 2012. The increased hydrological cycle seen in recent years continued, with more evaporation in drier locations and more precipitation in rainy areas. In a pattern that has held since 2004, salty areas of the ocean surfaces and subsurfaces were anomalously salty on average, while fresher areas were anomalously fresh. Global tropical cyclone activity during 2012 was near average, with a total of 84 storms compared with the 1981-2010 average of 89. Similar to 2010 and 2011, the North Atlantic was the only hurricane basin that experienced above-normal activity. In this basin, Sandy brought devastation to Cuba and parts of the eastern North American seaboard. All other basins experienced either near-or below-normal tropical cyclone activity. Only three tropical cyclones reached Category 5 intensity-all in Bopha became the only storm in the historical record to produce winds greater than 130 kt south of 7 N. It was also the costliest storm to affect the Philippines and killed more than 1000 residents. Minimum Arctic sea ice extent in September and Northern Hemisphere snow cover extent in June both reached new record lows. June snow cover extent is now declining at a faster rate (-17.6% per decade) than September sea ice extent (-13.0% per decade). Permafrost temperatures reached record high values in northernmost Alaska. A new melt extent record occurred on 11-12 July on the Greenland ice sheet; 97% of the ice sheet showed some form of melt, four times greater than the average melt for this time of year. The climate in Antarctica was relatively stable overall. The largest maximum sea ice extent since records begain in 1978 was observed in September 2012. In the stratosphere, warm air led to the second smallest ozone hole in the past two decades. Even so, the springtime ozone layer above Antarctica likely will not return to its early 1980s state until about 2060. Following a slight decline associated with the global 2 emissions from fossil fuel combustion and cement production reached a record 9.5 +/- 0.5 Pg C in 2011 and a new record of 9.7 +/- 0.5 Pg C is estimated for 2012. Atmospheric CO2 concentrations increased by 2.1 ppm in 2012, to 392.6 ppm. In spring 2012, 2 concentration exceeded 400 ppm at 7 of the 13 Arctic observation sites. Globally, other greenhouse gases including methane and nitrous oxide also continued to rise in concentration and the combined effect now represents a 32% increase in radiative forcing over a 1990 baseline. Concentrations of most ozone depleting substances continued to fall.

Description: Advances in next-generation sequencing technologies are providing longer nucleotide sequence reads that contain more information about phylogenetic relationships. We sought to use this information to understand the evolution and ecology of bacterioplankton at our long-term study site in the Western Sargasso Sea. A bioinformatics pipeline called PhyloAssigner was developed to align pyrosequencing reads to a reference multiple sequence alignment of 16S ribosomal RNA (rRNA) genes and assign them phylogenetic positions in a reference tree using a maximum likelihood algorithm. Here, we used this pipeline to investigate the ecologically important SAR11 clade of Alphaproteobacteria. A combined set of 2.7 million pyrosequencing reads from the 16S rRNA V1-V2 regions, representing 9 years at the Bermuda Atlantic Time-series Study (BATS) site, was quality checked and parsed into a comprehensive bacterial tree, yielding 929 036 Alphaproteobacteria reads. Phylogenetic structure within the SAR11 clade was linked to seasonally recurring spatiotemporal patterns. This analysis resolved four new SAR11 ecotypes in addition to five others that had been described previously at BATS. The data support a conclusion reached previously that the SAR11 clade diversified by subdivision of niche space in the ocean water column, but the new data reveal a more complex pattern in which deep branches of the clade diversified repeatedly across depth strata and seasonal regimes. The new data also revealed the presence of an unrecognized clade of Alphaproteobacteria, here named SMA-1 (Sargasso Mesopelagic Alphaproteobacteria, group 1), in the upper mesopelagic zone. The high-resolution phylogenetic analyses performed herein highlight significant, previously unknown, patterns of evolutionary diversification, within perhaps the most widely distributed heterotrophic marine bacterial clade, and strongly links to ecosystem regimes. © 2013 International Society for Microbial Ecology All rights reserved.

Description: Coccolithophores have influenced the global climate for over 200 million years. These marine phytoplankton can account for 20 per cent of total carbon fixation in some systems. They form blooms that can occupy hundreds of thousands of square kilometres and are distinguished by their elegantly sculpted calcium carbonate exoskeletons (coccoliths), rendering them visible from space. Although coccolithophores export carbon in the form of organic matter and calcite to the sea floor, they also release CO 2 in the calcification process. Hence, they have a complex influence on the carbon cycle, driving either CO 2 production or uptake, sequestration and export to the deep ocean. Here we report the first haptophyte reference genome, from the coccolithophore Emiliania huxleyi strain CCMP1516, and sequences from 13 additional isolates. Our analyses reveal a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome. Comparisons across strains demonstrate that E. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires. Genome variability within this species complex seems to underpin its capacity both to thrive in habitats ranging from the equator to the subarctic and to form large-scale episodic blooms under a wide variety of environmental conditions. © 2013 Macmillan Publishers Limited. All rights reserved.

Description: Subduction of intraplate seamounts beneath a geochemically depleted mantle wedge provides a seldom opportunity to trace element recycling and mantle flow in subduction zones. Here we present trace element and Sr, Nd and Pb isotopic compositions of lavas from the central Tonga–Kermadec arc, west of the contemporary Louisville–Tonga trench intersection, to provide new insights into the effects of Louisville seamount subduction. Elevated 206Pb/204Pb, 208Pb/204Pb, 86Sr/87Sr in lavas from the central Tonga–Kermadec arc front are consistent with localized input of subducted alkaline Louisville material (lavas and volcaniclastics) into sub-arc partial melts. Furthermore, absolute Pacific Plate motion models indicate an anticlockwise rotation in the subducted Louisville seamount chain that, combined with estimates of the timing of fluid release from the subducting slab, suggests primarily trench-normal mantle flow beneath the central Tonga–Kermadec arc system.

Description: Nearly 50 years ago Bjerknes1 suggested that the character of large-scale air–sea interaction over the mid-latitude North Atlantic Ocean differs with timescales: the atmosphere was thought to drive directly most short-term—interannual—sea surface temperature (SST) variability, and the ocean to contribute significantly to long-term—multidecadal—SST and potentially atmospheric variability. Although the conjecture for short timescales is well accepted, understanding Atlantic multidecadal variability (AMV) of SST2, 3 remains a challenge as a result of limited ocean observations. AMV is nonetheless of major socio-economic importance because it is linked to important climate phenomena such as Atlantic hurricane activity and Sahel rainfall, and it hinders the detection of anthropogenic signals in the North Atlantic sector4, 5, 6. Direct evidence of the oceanic influence of AMV can only be provided by surface heat fluxes, the language of ocean–atmosphere communication. Here we provide observational evidence that in the mid-latitude North Atlantic and on timescales longer than 10 years, surface turbulent heat fluxes are indeed driven by the ocean and may force the atmosphere, whereas on shorter timescales the converse is true, thereby confirming the Bjerknes conjecture. This result, although strongest in boreal winter, is found in all seasons. Our findings suggest that the predictability of mid-latitude North Atlantic air–sea interaction could extend beyond the ocean to the climate of surrounding continents.

Description: Mesoscale anticyclonic eddies in the Irminger Sea are observed using a mooring and a glider. Between 2002 and 2009, the mooring observed 53 anticyclones. Using a kinematic model, objective estimates of eddy length scales and velocity structure are made for 16 eddies. Anticyclones had a mean core diameter of 12 km, and their mean peak observed azimuthal speed was 0.1 m s(-1). They had core salinities and potential temperatures of 34.91-34.98 and 4.488-5.34 degrees C, respectively, making them warm and salty features. These properties represent a typical salinity anomaly of 0.03 and a temperature anomaly of 0.28 degrees C from noneddy values. All eddies had small (〈〈 1) Rossby numbers. In 2006, the glider observed two anticyclones having diameters of about 20 km and peak azimuthal speeds of about 0.3 m s(-1). Similar salinity anomalies were detected throughout the Irminger Sea by floats profiling in anticyclones. Two formation regions for the eddies are identified: one to the west of the Reykjanes Ridge and the other off the East Greenland Irminger Current near Cape Farewell close to the mooring. Observations indicate that eddies formed in the former region are larger than eddies observed at the mooring. A clear increase in eddy salinity is observed between 2002 and 2009. The observed breakup of these eddies in winter implies that they are a source of salt for the central gyre. The anticyclones are similar to those found in both the Labrador Sea and Norwegian Sea, making them a ubiquitous feature of the subpolar North Atlantic basins.

Description: In this article we address the causes of the large-scale tropical sea level pressure (SLP) changes during climate change. The analysis we present is based on model simulations, observed trends and the seasonal cycle. In all three cases the regional changes of tropospheric temperature (Ttropos) and SLP are strongly related to each other (considerably stronger than (sea) surface temperature and SLP). This relationship basically follows the Bjerknes Circulation Theorem, with relatively low regional SLP where we have relatively high Ttropos and vice versa. A simple physical model suggests a tropical SLP response to horizontally inhomogeneous warming in the tropical Ttropos, with a sensitivity coefficient of about -1.7 hPa/K. This relationship explains a large fraction of observed and predicted changes in the tropical SLP. It is shown that in climate change model simulations the tropospheric land-sea warming contrast is the most significant structure in the regional Ttropos changes relative to the tropical mean changes. Since the land-sea warming contrast exists in the absent of any atmospheric circulation changes it can be argued that the large-scale response of tropical SLP changes is to first order a response to the tropical land-sea warming contrast. Further, as land-sea warming contrast is mostly available moisture dependent, the models predict a stronger warming and decreasing SLP in the drier regions from South America to Africa and a weaker warming and increasing SLP over the wetter Indo-Pacific warm pool region. This suggests an increase in the potential for deep convection conditions over the Atlantic Sector and a decrease over the Indo-Pacific warm pool region in the future.

Description: Variations in eastern Indian Ocean upper-ocean thermal properties are assessed for the period 1970–2004, with a particular focus on asymmetric features related to opposite phases of Indian Ocean Dipole events, using high-resolution ocean model hindcasts. Sensitivity experiments, where atmospheric forcing variability is restricted to the Indian or Pacific Ocean only, support the interpretation of forcing mechanisms for large-scale asymmetric behavior in eastern Indian Ocean variability. Years are classified according to eastern Indian Ocean subsurface heat content (HC) as proxy of thermocline variations. Years characterized by anomalous low HC feature a zonal gradient in upper-ocean properties near the equator, while high events have a meridional gradient from the tropics into the subtropics. The spatial and temporal characteristics of the seasonal evolution of HC anomalies for the two cases is distinct, as is the relative contribution from Indian Ocean atmospheric forcing versus remote influences from Pacific wind forcing: low events develop rapidly during austral winter/spring in response to Indian Ocean wind forcing associated with an enhanced southeasterly monsoon driving coastal upwelling and a shoaling thermocline in the east; in contrast, formation of anomalous high eastern Indian Ocean HC is more gradual, with anomalies earlier in the year expanding from the Indonesian Throughflow (ITF) region, initiated by remote Pacific wind forcing and transmitted through the ITF via coastal wave dynamics. Implications for seasonal predictions arise with high HC events offering extended lead times for predicting thermocline variations and upper-ocean properties across the eastern Indian Ocean.

Description: European Polar Low Working Group This workshop summarized the current state of PL research in the Arctic and Antarctic. A couple of related projects are in the planning phase or already funded. The creation of a PL database for the Norwegian Sea in the frame of the Sea Surface Temperature and Altimeter Synergy (STARS) project (http://projects.met.no stars) will provide a valuable resource for future research and, potentially, predictability improvements. The maintenance of this database and the creation of similar databases for other polar areas including satellite and NWP data are highly recommended. There is also a need for free and timely access to satellite data, in particular to SAR data to fill the gap caused by the mission end of Envisat. With the increasing resolution of climate models, mesoscale processes such as polar MCs will have to be considered in international research programs such as the World Climate Research Programme (WCRP) Polar Climate Predictability Initiative and the World Weather Research Programme (WWRP) Polar Predictability Project.

Description: During the past decades climate and freshwater dynamics in the northwestern North Atlantic have undergone major changes. Large-scale freshening episodes, related to polar freshwater pulses, have had a strong influence on ocean variability in this climatically important region. However, little is known about variability before 1950, mainly due to the lack of long-term high-resolution marine proxy archives. Here we present the first multidecadal-length records of annually resolved Ba/Ca variations from Northwest Atlantic coralline algae. We observe positive relationships between algal Ba/Ca ratios from two Newfoundland sites and salinity observations back to 1950. Both records capture episodical multi-year freshening events during the 20th century. Variability in algal Ba/Ca is sensitive to freshwater-induced changes in upper ocean stratification, which affect the transport of cold, Ba-enriched deep waters onto the shelf (highly stratified equals less Ba/Ca). Algal Ba/Ca ratios therefore may serve as a new resource for reconstructing past surface ocean freshwater changes.