ALBERT

Description: In this study, a series of drained triaxial tests were performed in order to examine the effect of cementation on the shear behavior of granular soil. It was observed that the brittle nature and dilative tendency of granular soil is dominant under a low confining stress level, while high confining stress results in a contractive behavior despite the strong cementation bond. Based on experimental results, an idealized concept is suggested to define the shear strength of cemented sand in three distinctive zones: the cementation control zone with a constant cohesion intercept at a low confining stress level, the transition zone in which the cohesion intercept is gradually reduced after a breaking point, and the stress control zone with almost zero cohesion intercept due to breakage of cementation bonds at a high confining stress level. It was shown that the sitting pressures during cementation have little effect on the strength parameters of cemented sand, while the increase of gypsum content and relative density, and the decrease of particle size, result in an increase of the cohesion intercept and the breaking point. In addition, the prediction equations for the shear strength and cohesion intercept in the cementation control zone and the transition zone are suggested from the analytical and experimental interpretation.

Description: A new 30-arc second resolution global topography/bathymetry grid (SRTM30_PLUS) has been developed from a wide variety of data sources. Land and ice topography comes from the SRTM30 and ICESat topography, respectively. Ocean bathymetry is based on a new satellite-gravity model where the gravity-to-topography ratio is calibrated using 298 million edited soundings. The main contribution of this study is the compilation and editing of the raw soundings, which come from NOAA, individual scientists, SIO, NGA, JAMSTEC, IFREMER, GEBCO, and NAVOCEANO. The gridded bathymetry is available for ftp download in the same format as the 33 tiles of SRTM30 topography. There are 33 matching tiles of source identification number to convey the provenance of every grid cell. The raw sounding data, converted to a simple common format, are also available for ftp download.

Description: Cirripedes are one of the major groups of fouling organism in the marine environment. The cyprid can, before a permanent attachment, actively explore and walk on the substratum using its antennules in a bipedal fashion without leaving the surface. Studying the structure of the cyprid antennule is therefore important for understanding the events that culminate in biofouling by barnacles. There are at present no complete, standardised accounts of the structure of the cyprid antennules in thoracican barnacles, and moreover, the existing accounts vary in their use of terminology. This article describes the cyprid antennule of the barnacle Megabalanus rosa. This barnacle species is common in E Asia, and the cyprids have previously been used in several biofouling studies. All externally visible setae on the antennules have been mapped; these comprise both chemosensors with a terminal pore, a putative aesthetasc-like seta and mechano-sensory setae. More setae were found on the attachment disc than in previous scanning electron microscope-based studies, but not all structures that can be seen with transmission electron microscopy were visible. The disc itself seems to have a variable surface area, which could assist in exploring rough surfaces. The various lengths of the antennular setae, coupled with the disposition of the segments, enable the cyprid to cover a wide swath of substratum during exploratory walking. A new terminology is proposed for cyprid antennular setae, which will form a basis for future comparative and functional studies of cirripede settlement.

Description: Effects of elevated temperature on the formation and subsequent degradation of diatom aggregates were studied in a laboratory experiment with a natural plankton community from the Kiel Fjord (Baltic Sea). Aggregates were derived from diatom blooms that developed in indoor mesocosms at 2.5 and 8.5 degrees C, corresponding to the 1993 to 2002 mean winter in situ temperature of the Western Baltic Sea and the projected sea surface temperature during winter in 2100, respectively. Formation and degradation of diatom aggregates at these 2 temperatures in the dark were promoted with roller tanks over a period of 11 d. Comparison of the 2 temperature settings revealed an enhanced aggregation potential of diatom cells at elevated temperature, which was likely induced by an increased concentration of transparent exopolymer particles (TEP). The enhanced aggregation potential led to a significantly higher proportion of particulate organic matter in aggregates at 8.5 degrees C. Moreover, the elevated temperature favoured the growth of bacteria, bacterial biomass production, and the activities of sugar- and protein-degrading extracellular enzymes in aggregates. Stimulating effects of rising temperature on growth and metabolism of the bacterial community resulted in an earlier onset of aggregate degradation and silica dissolution. Remineralization of carbon in aggregates at elevated temperature was partially compensated by the formation of carbon-rich TEP during dark incubation. Hence, our results suggest that increasing temperature will affect both formation and degradation of diatom aggregates. We conclude that the vertical export of organic matter through aggregates may change in the future, depending on the magnitude and vertical depth penetration of warming in the ocean.

Description: The Vasco—Cirene field experiment, in January—February 2007, targeted the Seychelles—Chagos thermocline ridge (SCTR) region, with the main purpose of investigating Madden—Julian Oscillation (MJO)-related SST events. The Validation of the Aeroclipper System under Convective Occurrences (Vasco) experiment (Duvel et al. 2009) and Cirene cruise were designed to provide complementary views of air—sea interaction in the SCTR region. While meteorological balloons were deployed from the Seychelles as a part of Vasco, the Research Vessel (R/V) Suroît was cruising the SCTR region as a part of Cirene. more: The Vasco—Cirene program explores how strong air—sea interactions promoted by the shallow thermocline and high sea surface temperature in the Seychelles—Chagos thermocline ridge results in marked variability at synoptic, intraseasonal, and interannual time scales. The Cirene oceanographic cruise collected oceanic, atmospheric, and air—sea flux observations in this region in January—February 2007. The contemporaneous Vasco field experiment complemented these measurements with balloon deployments from the Seychelles. Cirene also contributed to the development of the Indian Ocean observing system via deployment of a mooring and 12 Argo profilers. Unusual conditions prevailed in the Indian Ocean during January and February 2007, following the Indian Ocean dipole climate anomaly of late 2006. Cirene measurements show that the Seychelles—Chagos thermocline ridge had higher-than-usual heat content with subsurface anomalies up to 7°C. The ocean surface was warmer and fresher than average, and unusual eastward currents prevailed down to 800 m. These anomalous conditions had a major impact on tuna fishing in early 2007. Our dataset also sampled the genesis and maturation of Tropical Cyclone Dora, including high surface temperatures and a strong diurnal cycle before the cyclone, followed by a 1.5°C cooling over 10 days. Balloonborne instruments sampled the surface and boundary layer dynamics of Dora. We observed small-scale structures like dry-air layers in the atmosphere and diurnal warm layers in the near-surface ocean. The Cirene data will quantify the impact of these finescale features on the upper-ocean heat budget and atmospheric deep convection.

Description: Data from New Zealand and northern Victoria Land, Antarctica, indicate that the Cambrian Takaka Terrane intra-oceanic arc/backarc assemblage and the Bowers Terrane intra-oceanic arc/back-arc assemblage were accreted to the Gondwana margin by the Late Cambrian. Compelling similarities between the arc rocks and the immediate post-arc sediments firmly place the two regions in the same tectonic framework and imply close paleogeographic proximity. Currently, the Ross Orogen is thought to be the result of sinistral oblique convergence with west-directed subduction, and accretion of the arc assemblages is attributed to closure of backarc basins. Syntectonic fluvial conglomerates in both regions attest to the development of fluvial systems draining both the accreted arc and the contemporaneous continental margin arc. Trilobite faunas indicate that fluvial sedimentation commenced earlier in New Zealand than in northern Victoria Land. In the context of the widely accepted sinistral oblique convergence model, these data suggest an original position for New Zealand to the south of northern Victoria Land, probably in the region of the southern Ross Sea.

Description: The western Pacific subtropical high (WPSH) is closely related to Asian climate. Previous examination of changes in the WPSH found a westward extension since the late 1970s, which has contributed to the inter-decadal transition of East Asian climate. The reason for the westward extension is unknown, however. The present study suggests that this significant change of WPSH is partly due to the atmosphere's response to the observed Indian Ocean-western Pacific (IWP) warming. Coordinated by a European Union's Sixth Framework Programme, Understanding the Dynamics of the Coupled Climate System (DYNAMITE), five AGCMs were forced by identical idealized sea surface temperature patterns representative of the IWP warming and cooling. The results of these numerical experiments suggest that the negative heating in the central and eastern tropical Pacific and increased convective heating in the equatorial Indian Ocean/ Maritime Continent associated with IWP warming are in favor of the westward extension of WPSH. The SST changes in IWP influences the Walker circulation, with a subsequent reduction of convections in the tropical central and eastern Pacific, which then forces an ENSO/Gill-type response that modulates the WPSH. The monsoon diabatic heating mechanism proposed by Rodwell and Hoskins plays a secondary reinforcing role in the westward extension of WPSH. The low-level equatorial flank of WPSH is interpreted as a Kelvin response to monsoon condensational heating, while the intensified poleward flow along the western flank of WPSH is in accord with Sverdrup vorticity balance. The IWP warming has led to an expansion of the South Asian high in the upper troposphere, as seen in the reanalysis.

Description: Models of multiple potentially limiting nutrients currently employ either multiplicative or threshold formulations, neither of which has a sound mechanistic explanation. Despite experimental evidence that lack of P severely constrains N assimilation, this mechanism has not been considered for constructing models of multi-nutrient limitation. We construct a phytoplankton optimal growth model linking C, chlorophyll (Chl), N, and P through a limitation chain in which P limits N assimilation, N limits photosynthesis and photosynthesis limits growth. The resulting formulation possesses characteristics of both multiplicative and threshold approaches and provides a mechanistic foundation for modelling multi-nutrient and light limitation of phytoplankton growth. The model compares well with experimental observations for a variety of unicellular phytoplankton species. It is suggested that the widely held view that N and P limitation act independently of each other is based on an invalid interpretation of experimental observations and that the transition from N to P limitation occurs over a wide range of colimitation rather than a sharply-defined transition point. If the species considered in this study are representative for marine phytoplankton, our model results indicate that most phytoplankton are colimited by N and P when inorganic N and P are simultaneously exhausted in the surface ocean. The model suggests that the close match between marine inorganic (Redfield) and phytoplankton N:P ratios results from optimal nutrient utilisation but does not indicate optimality of Redfield N:P.

Description: Generalist and opportunistic marine predators use flexible foraging behaviour to exploit prey bases that change in diversity and spatial and temporal distributions, Behavioural flexibility is constrained by characteristics Such as individual cognitive and physical capabilities, age, reproductive condition and central place foraging. To assess flexibility in the foraging tactics of a marine bird, we investigated the diets and foraging behaviour of the largest seabird predator in the North Atlantic Ocean. Northern gannets Sula bassana exploit abroad spectrum of pelagic prey that range in mass by more than 2 orders of magnitude, We investigated their foraging activity at their largest. offshore colony in the western Atlantic Ocean during 1998 to 2002, when they preyed primarily on shoals of spawning and post-spawning capelin Mallotus villosus, a small forage fish (similar to 15 g), and also on a much larger pelagic fish, post-smolt Atlantic salmon Salmo salar (similar to 200 g). Inter-annual dietary variation is associated with gannet and prey fish distributions. Landings of capelin at the colony by gannets were correlated with returns of larger foraging flocks from inshore, whereas landings of Atlantic salmon were associated with smaller flocks returning from offshore. Maximum foraging trip distances ranged from 20 to 200 km and averaged 57 +/- 12 (SE) km, consistent with distances to inshore capelin aggregations. When capelin abundance was low (in 2002), more gannets foraged offshore, preyed on large pelagic fishes (mostly Atlantic salmon) and exhibited the greatest dietary diversity. Though the Outbound portions of foraging trips were more sinuous than inbound routes, individual gannets exhibited general fidelity to foraging sites. These large avian predators used flexible foraging tactics to adjust to changing prey conditions and generate longer-term strategies to Lake advantage of diverse trophic interactions over a range of ocean ecosystems.

Description: Individual migratory schedules and wintering areas of northern gannets Morus bassanus were studied over 2 consecutive winters by deploying geolocation data loggers on breeding adults from the Bass Rock, UK. Northern gannets attended the breeding colony on Bass Rock until between 24 September and 16 October (median: 5 October). Afterwards, individual birds engaged in different migratory behaviour. Of the 22 birds tracked until at least December, 18% wintered in the North Sea and the English Channel, 27% in the Bay of Biscay and the Celtic Sea, 9% in the Mediterranean Sea and 45% off West Africa. Individual winter home ranges as measured by the 75% kernel density contours varied between 8 100 and 308 500 km(2) (mean = 134 000 km(2)). Several northern gannets migrated northwards from Bass Rock after leaving the colony for a stay of a few days to a few weeks, independent of whether they migrated to Africa or other southern areas later. Birds wintering off West Africa migrated to their wintering areas mostly within 3 to 5 wk, usually starting between early and late October. Most of these birds stayed off West Africa for a period of about 3 mo, where they remained in a relatively restricted area. Return migration was initiated between the end of January and mid-February, and took about as long as autumn migration. We conclude that individual gannets display very variable migratory behaviours, with discrete winter home ranges, and we infer that the migration habits of gannets may be changing in response to human impacts on marine ecosystems.

Description: We examined the influence of both season and hydrographic and meteorological factors on seabird abundance in the southern North Sea. Seabirds were counted from ships in a study area of 27.8 x 32.8 km on 407 d from 1990 to 2007. Two hydrographic and 5 meteorological parameters were taken from archived data. The relationships between bird abundance and abiotic parameters were investigated by generalised additive models for 3 distinct seasons. The species in the study area exhibited different seasonal patterns. While some species were present year-round, others occurred only at certain periods. Despite these substantial changes in abundances, the nature of the interactions between bird abundances and abiotic parameters did not vary much between seasons. All 5 meteorological and 2 hydrographic parameters significantly influenced the abundance of seabird species, though to a different degree. The single factors that most often had a significant influence in the single models were wind field, sea surface temperature anomaly, sea surface salinity anomaly and air pressure change. The quantitative composition of the seabird community differed significantly between onshore wind and offshore wind conditions. It is assumed that hydrographic parameters are relevant for the birds by determining their foraging habitats and that atmospheric parameters influence flight conditions during foraging and migration.

Description: Seasonal reconstructions of the Southern Hemisphere annular mode (SAM) index are derived to extend the record before the reanalysis period, using station sea level pressure (SLP) data as predictors. Two reconstructions using different predictands are obtained: one [Jones and Widmann (JW)] based on the first principal component (PC) of extratropical SLP and the other (Fogt) on the index of Marshall. A regional-based SAM index (Visbeck) is also considered.These predictands agree well post-1979; correlations decline in all seasons except austral summer for the full series starting in 1958. Predictand agreement is strongest in spring and summer; hence agreement between the reconstructions is highest in these seasons. The less zonally symmetric SAM structure in winter and spring influences the strength of the SAM signal over land areas, hence the number of stations included in the reconstructions. Reconstructions from 1865 were, therefore, derived in summer and autumn and from 1905 in winter and spring. This paper examines the skill of each reconstruction by comparison with observations and reanalysis data. Some of the individual peaks in the reconstructions, such as the most recent in austral summer, represent a full hemispheric SAM pattern, while others are caused by regional SLP anomalies over the locations of the predictors. The JW and Fogt reconstructions are of similar quality in summer and autumn, while in winter and spring the Marshall index is better reconstructed by Fogt than the PC index is by JW. In spring and autumn the SAM shows considerable variability prior to recent decades.

Description: Ecological stoichiometry can be a powerful tool to understand food web consequences of altered biogeochemical cycles as well as consequences of biodiversity loss on biogeochemistry and has proved to be a suitable framework to predict effects of consumers on the nutrient content of their prey. However, predictions from ecological stoichiometry have mainly been tested using single consumer species, whereas in most natural ecosystems several consumer species coexist. We conducted 2 outdoor mesocosm experiments with marine rock pool communities to test whether species richness and species combination of benthic invertebrates affected the nutrient content of periphyton. We independently manipulated 12 different consumer combinations ranging from 0 to 6 (2004) or 0 to 4 (2005) grazer species and measured the biomass and nutrient content of the algae. Grazers included 3 gastropods and 3 crustaceans. In 2005, we additionally analyzed animal nutrient content and N excretion rate. Algal biomass and C:N ratios decreased in the presence of grazers in both years, indicating that the remaining algae had higher internal N content. Also, both biomass (2004 and 2005) and C:N ratios (only 2004) decreased even further when grazer richness increased. In 2004, significant net diversity effects of grazer richness on periphyton C:N ratios indicated that periphyton N content under multispecies grazing could not be predicted from the effect of single species. In 2005, significant net diversity effects on C:N ratios were rare, but periphyton C:N ratios consistently decreased with increasing grazer excretion rate, indicating that higher nitrogen regeneration by grazers led to higher N incorporation by algae. The effects of species richness were mainly affected by the presence of one efficient grazer, the gastropod Littorina littorea. Our experiments indicate that non-additive intraguild interactions may qualitatively alter the stoichiometric effects of multispecies consumer assemblages.

Description: Extratropical cyclones and how they may change in a warmer climate have been investigated in detail with a high-resolution version of the ECHAM5 global climate model. A spectral resolution of T213 (63 km) is used for two 32-yr periods at the end of the twentieth and twenty-first centuries and integrated for the Intergovernmental Panel on Climate Change (IPCC) A1B scenario. Extremes of pressure, vorticity, wind, and precipitation associated with the cyclones are investigated and compared with a lower-resolution simulation.Comparison with observations of extreme wind speeds indicates that the model reproduces realistic values. This study also investigates the ability of the model to simulate extratropical cyclones by computing composites of intense storms and contrasting them with the same composites from the 40-yr ECMWF Re-Analysis (ERA-40). Composites of the time evolution of intense cyclones are reproduced with great fidelity; in particular the evolution of central surface pressure is almost exactly replicated, but vorticity, maximum wind speed, and precipitation are higher in the model. Spatial composites also show that the distributions of pressure, winds, and precipitation at different stages of the cyclone life cycle compare well with those from ERA-40, as does the vertical structure. For the twenty-first century, changes in the distribution of storms are very similar to those of previous study. There is a small reduction in the number of cyclones but no significant changes in the extremes of wind and vorticity in both hemispheres. There are larger regional changes in agreement with previous studies. The largest changes are in the total precipitation, where a significant increase is seen. Cumulative precipitation along the tracks of the cyclones increases by some 11% per track, or about twice the increase in global precipitation, while the extreme precipitation is close to the globally averaged increase in column water vapor (some 27%). Regionally, changes in extreme precipitation are even higher because of changes in the storm tracks.

Description: It is widely assumed that the production of secondary metabolites against grazing and fouling is costly for seaweeds in terms of metabolic energy and should therefore be reduced under conditions of resource limitation. Here we tested the hypothesis that anti-herbivore defenses and bioactivity against mussels in 4 brown seaweeds from northern-central Chile will be reduced when light is limited. In a 2 wk experiment, seaweeds were kept under different low-light conditions (~76 to 99% reduction of ambient sunlight) and grazing situations. Subsequently, we tested their anti-herbivore defense against a common amphipod grazer in feeding assays with living algal tissue and reconstituted food pellets. A standard test employing the production of byssus threads by mussels was furthermore used as an indicator for deterrents in crude algal extracts. All investigated seaweeds showed decreased growth under the stepwise light reduction. Lessonia nigrescens exhibited reduced defense ability under severe low-light conditions when living tissue was offered to the amphipod, probably caused by changes in the tissue structure or in nutritional traits. In Dictyota kunthii, L. trabeculata and Macrocystis integrifolia this effect was absent. None of the investigated seaweeds showed a clear effect of light reduction on chemically mediated defenses against the mesograzer and there was no effect of light limitation on the bioactivity against mussels. Thus, against general assumptions, chemical defense in the investigated seaweeds does not appear to be reduced under severe resource limitation. Results suggest that seaweeds may use different strategies of energy allocation to cope with low-light conditions.

Description: We describe an integrated database on European macrobenthic fauna, developed within the framework of the European Network of Excellence MarBEF, and the data and data integration exercise that provided its content. A total of 44 datasets including 465354 distribution records from soft-bottom macrobenthic species were uploaded into the relational MacroBen database, corresponding to 22897 sampled stations from all European seas, and 7203 valid taxa. All taxonomic names were linked to the European Register of Marine Species, which was used as the taxonomic reference to standardise spelling and harmonise synonymy. An interface was created, allowing the user to explore, subselect, export and analyse the data by calculating different indices. Although the sampling techniques and intended use of the datasets varied tremendously, the integrated database proved to be robust, and an important tool for studying and understanding large-scale long-term distributions and abundances of marine benthic life. Crucial in the process was the willingness and the positive data-sharing attitude of the different data contributors. Development of a data policy that is highly aware of sensitivities and ownership issues of data providers was essential in the creation of this goodwill.

Description: The regional dust model system LM-MUSCAT-DES was developed in the framework of the SAMUM project. Using the unique comprehensive data set of near-source dust properties during the 2006SAMUMfield campaign, the performance of the model system is evaluated for two time periods in May and June 2006. Dust optical thicknesses, number size distributions and the position of the maximum dust extinction in the vertical profiles agree well with the observations. However, the spatio-temporal evolution of the dust plumes is not always reproduced due to inaccuracies in the dust source placement by the model. While simulated winds and dust distributions are well matched for dust events caused by dry synoptic-scale dynamics, they are often misrepresented when dust emissions are caused by moist convection or influenced by small-scale topography that is not resolved by the model. In contrast to long-range dust transport, in the vicinity of source regions the model performance strongly depends on the correct prediction of the exact location of sources. Insufficiently resolved vertical grid spacing causes the absence of inversions in the model vertical profiles and likely explains the absence of the observed sharply defined dust layers.

Description: Deep-sea whale falls create sulfidic habits Supporting chemoautotrophic communities, but microbial processes underlying the formation Of Such habitats remain poorly evaluated. Microbial degradation processes (sulfate reduction, methanogenesis) and biogeochemical gradients were studied in a whale-fall habitat created by a 30 t whale carcass deployed at 1675 m depth for 6 to 7 yr on the California margin. A variety of measurements were conducted including photomosaicking, microsensor measurements, radio-tracer incubations and geochemical analyses. Sediments were Studied at different distances (0 to 9 in) from the whale fall. Highest microbial activities and steepest vertical geochemical gradients were found within 0.5 m of the whale fall, revealing ex situ sulfate reduction and in vitro methanogenesis rates of up to 717 and 99 mmol m(-2) d(-1), respectively. In sediments containing whale biomass, methanogenesis was equivalent to 20 to 30%, of sulfate reduction. During in vitro sediment studies, sulfide and methane were produced within days to weeks after addition of whale biomass, indicating that chemosynthesis is promoted at early stages of the whale fall. Total sulfide production from sediments within 0.5 m of the whale fall was 2.1 +/- 3 and 1.5 +/- 2.1 mol d(-1) in Years 6 and 7, respectively, of which similar to 200 mmol d(-1) were available as free sulfide. Sulfate reduction in bones was much lower, accounting for a total availability of similar to 10 mmol sulfide d(-1). Over periods of at least 7 yr, whale falls can create sulfidic conditions similar to other chemosynthetic habitats Such as cold seeps and hydrothermal vents.

Description: Screening for pathogenic micro-organisms is an essential component of translocation-based conservation management. While there are some data on pathogens in New Zealand passerines, little is known about the distribution and prevalence of pathogens infecting New Zealand Psittaciformes. We conducted a survey for pathogens of the vulnerable New Zealand endemic red-crowned parakeet Cyanoramphus novaezelandiae in two wild populations (Little Barrier Island and Raoul Island), and in a translocated population (Tiritiri Matangi Island). A total of 101 cloacal samples were tested for Salmonella and Yersinia. Of these, 82 samples were also tested for Campylobacter. None of these microorganisms were detected. Although our sampling effort was insufficient to detect a low prevalence of Campylobacter, modelling of minimum detectable prevalence of Salmonella and Yersinia indicates that these micro-organisms would have been detected if present as common or chronic conditions of red-crowned parakeets at these sites.

Description: Cephalopods play a significant role in coastal and oceanic ecosystems, both as consumers of invertebrates and small fish and as the prey of some fish, seabirds and marine mammals and other large predators. Approximately 30 species of cephalopod have been recorded in the north-eastern Atlantic and adjacent waters, including 18 teuthid (squid), seven sepiolid (bobtail), three sepiid (cuttlefish) and 10 octopod (octopus) species. A number of these are exploited commercially and support important target and by-catch fisheries in Western Europe. During the past decade, annual landings of cephalopods from the north-eastern Atlantic (International Council for the Exploration of the Sea [ICES] area) have ranged from 40,000 to 55,000 t, including substantial catches of long-fin (loliginid) squid (7000–11,000 t per annum), short-fin (ommastrephid) squid (3000–10,000 t), cuttlefish (including sepiolids; 16,000–24,000 t) and octopods (12,000–18,000 t). The most important exploited species in the north-eastern Atlantic are Eledone cirrhosa, Illex coindetii, Loligo forbesi, Loligo vulgaris, Octopus vulgaris, Todarodes sagittatus, Todaropsis eblanae and Sepia officinalis. Other species including Alloteuthis subulata, Gonatus fabricii and certain sepiolids, appear to be abundant and may be marketable. Cephalopods tend to rapidly concentrate heavy metals and other toxic substances in their tissues and this plays an important role in the bioaccumulation of these pollutants in marine predators as well as having implications for human consumption. High levels of cadmium and mercury are often recorded in cephalopod tissues. Another important environmental issue concerns the potential impact of widespread human activity on cephalopod spawning areas, particularly bottom-fishing operations but also shipping, and oil exploration and production. In contrast to many finfish species that spawn annually over a number of years, most cephalopods live only 1–2 yr and die after spawning. Therefore, failure to reproduce and recruit adequately in any given year may seriously impact the long-term viability of cephalopod stocks. Climate change is expected to have a significant effect on many species in the north-eastern Atlantic. This review provides a detailed account of the zoogeography, biology and ecology of cephalopods in the north-eastern Atlantic, on a species-by-species basis. Important economic, ecological and conservation issues affecting cephalopods in this area are also discussed

Description: A new, non-flux-corrected, global climate model is introduced, the Kiel Climate Model (KCM), which will be used to study internal climate variability from interannual to millennial time scales and climate predictability of the first and second kind. The version described here is a coarse-resolution version that will be employed in extended-range integrations of several millennia. KCM's performance in the tropical Pacific with respect to mean state, annual cycle, and El Nino-Southern Oscillation (ENSO) is described. Additionally, the tropical Pacific response to global warming is studied.Overall, climate drift in a multicentury control integration is small. However, KCM exhibits an equatorial cold bias at the surface of the order 1 degrees C, while strong warm biases of several degrees are simulated in the eastern tropical Pacific on both sides off the equator, with maxima near the coasts. The annual and semiannual cycles are realistically simulated in the eastern and western equatorial Pacific, respectively. ENSO performance compares favorably to observations with respect to both amplitude and period. An ensemble of eight greenhouse warming simulations was performed, in which the CO2 concentration was increased by 1% yr(-1) until doubling was reached, and stabilized thereafter. Warming of equatorial Pacific sea surface temperature (SST) is, to first order, zonally symmetric and leads to a sharpening of the thermocline. ENSO variability increases because of global warming: during the 30-yr period after CO2 doubling, the ensemble mean standard deviation of Nino-3 SST anomalies is increased by 26% relative to the control, and power in the ENSO band is almost doubled. The increased variability is due to both a strengthened (22%) thermocline feedback and an enhanced (52%) atmospheric sensitivity to SST; both are associated with changes in the basic state. Although variability increases in the mean, there is a large spread among ensemble members and hence a finite probability that in the "model world" no change in ENSO would be observed.

Description: The temporal evolution of the strength of the Atlantic Meridional Overturning Circulation (AMOC) in the subtropical North Atlantic is affected by both remotely forced, basin-scale meridionally coherent, climate-relevant transport anomalies, such as changes in high-latitude deep water formation rates, and locally forced transport anomalies, such as eddies or Rossby waves, possibly associated with small meridional coherence scales, which can be considered as noise. The focus of this paper is on the extent to which local eddies and Rossby waves when impinging on the western boundary of the Atlantic affect the temporal variability of the AMOC at 26.5 degrees N. Continuous estimates of the AMOC at this latitude have been made since April 2004 by combining the Florida Current, Ekman, and midocean transports with the latter obtained from continuous density measurements between the coasts of the Bahamas and Morocco, representing, respectively, the western and eastern boundaries of the Atlantic at this latitude.Within 100 km of the western boundary there is a threefold decrease in sea surface height variability toward the boundary, observed in both dynamic heights from in situ density measurements and altimetric heights. As a consequence, the basinwide zonally integrated upper midocean transport shallower than 1000 m-as observed continuously between April 2004 and October 2006-varies by only 3.0 Sv (1 Sv = 10(6) m(3) s(-1)) RMS. Instead, upper midocean transports integrated from western boundary stations 16, 40, and 500 km offshore to the eastern boundary vary by 3.6, 6.0, and 10.7 Sv RMS, respectively. The reduction in eddy energy toward the western boundary is reproduced in a nonlinear reduced-gravity model suggesting that boundary-trapped waves may account for the observed decline in variability in the coastal zone because they provide a mechanism for the fast equatorward export of transport anomalies associated with eddies impinging on the western boundary. An analytical model of linear Rossby waves suggests a simple scaling for the reduction in thermocline thickness variability toward the boundary. Physically, the reduction in amplitude is understood as along-boundary pressure gradients accelerating the fluid and rapidly propagating pressure anomalies along the boundary. The results suggest that the local eddy field does not dominate upper midocean transport or AMOC variability at 26.5 degrees N on interannual to decadal time scales.

Description: The SAMUM field campaign in southern Morocco in May/June 2006 provides valuable data to study the emission, and the horizontal and vertical transports of mineral dust in the Northern Sahara. Radiosonde and lidar observations show differential advection of air masses with different characteristics during stable nighttime conditions and up to 5-km deep vertical mixing in the strongly convective boundary layer during the day. Lagrangian and synoptic analyses of selected dust periods point to a topographic channel from western Tunisia to central Algeria as a dust source region. Significant emission events are related to cold surges from the Mediterranean in association with eastward passing upper-level waves and lee cyclogeneses south of the Atlas Mountains. Other relevant events are local emissions under a distinct cut-off low over northwestern Africa and gust fronts associated with dry thunderstorms over the Malian and Algerian Sahara. The latter are badly represented in analyses from the European Centre for Medium–Range Weather Forecasts and in a regional dust model, most likely due to problems with moist convective dynamics and a lack of observations in this region. This aspect needs further study. The meteorological source identification is consistent with estimates of optical and mineralogical properties of dust samples.

Description: Latitudinal clines in species diversity in limnic and terrestrial habitats have been noted for well over a century and are consistent across many taxonomic groups. However, studies in marine systems over the past 2 to 3 decades have yielded equivocal results. We conducted initial analyses of the MarBEF (EU Network of Excellence for Marine Biodiversity and Ecosystem Function) database to test for trends in local and regional diversity over the latitudinal extent of European continental-shelf waters (36° to 81°N). Soft-sediment benthic macrofauna exhibit little evidence of a latitudinal cline in local (α-) diversity measures. Relationships with water depth were relatively strong and complex. Statistically significant latitudinal trends were small and positive, suggesting a modest increase in diversity with latitude once water-depth covariates were removed. These results are consistent regardless of whether subsets of the database were used, replicates were pooled, or component taxonomical groups were evaluated separately. Local and regional diversity measures were significantly and positively correlated. Scientific cooperation through data-sharing is a powerful tool with which to address fundamental ecological and evolutionary questions relating to large-scale patterns and processes.

Description: This study examines whether or not biogeographical and/or managerial divisions across the European seas can be validated using soft-bottom macrobenthic community data. The faunal groups used were: all macrobenthos groups, polychaetes, molluscs, crustaceans, echinoderms, sipunculans and the last 5 groups combined. In order to test the discriminating power of these groups, 3 criteria were used: (1) proximity, which refers to the expected closer faunal resemblance of adjacent areas relative to more distant ones; (2) randomness, which in the present context is a measure of the degree to which the inventories of the various sectors, provinces or regions may in each case be considered as a random sample of the inventory of the next largest province or region in a hierarchy of geographic scales; and (3) differentiation, which provides a measure of the uniqueness of the pattern. Results show that only polychaetes fulfill all 3 criteria and that the only marine biogeographic system supported by the analyses is the one proposed by Longhurst (1998). Energy fluxes and other interactions between the planktonic and benthic domains, acting over evolutionary time scales, can be associated with the multivariate pattern derived from the macrobenthos datasets. Third-stage multidimensional scaling ordination reveals that polychaetes produce a unique pattern when all systems are under consideration. Average island distance from the nearest coast, number of islands and the island surface area were the geographic variables best correlated with the community patterns produced by polychaetes. Biogeographic patterns suggest a vicariance model dominating over the founder-dispersal model except for the semi-closed regional seas, where a model substantially modified from the second option could be supported.

Description: Several recent general circulation model studies discuss the predictability of the Indian Ocean dipole (IOD) mode, suggesting that it is predictable because of coupled ocean-atmosphere interactions in the Indian Ocean. However, it is not clear from these studies how much of the predictability is due to the response to El Nino. It is shown in this note that a simple statistical model that treats the Indian Ocean as a red noise process forced by tropical Pacific SST shows forecast skills comparable to those of recent general circulation model studies. The results also indicate that some of the eastern tropical Indian Ocean SST predictability in recent studies may indeed be beyond the skill of the simple model proposed in this note, indicating that dynamics in the Indian Ocean may have caused this improved predictability in this region. The model further indicates that the IOD index may be the least predictable index of Indian Ocean SST variability. The model is proposed as a null hypothesis for Indian Ocean SST predictions.

Description: Barnacle cypris larvae respond to many cues when selecting a settlement site. The settlement of over a million larvae on tiles of different textures, orientations and densities of incumbent settlers was measured on the rocky intertidal at Great Cumbrae, Scotland. Half of the tiles were replaced every tide whereas the others simultaneously accumulated settlers. Factor effects varied on each tide, and converged in the accumulating deployment. Increasing incumbent density led to net loss of settlement, which was less probable on the textures on which fastest settlment occurred ('very fine'), and more probable on those on which settlement was slowest ('smooth'). More settlement occurred on down-facing orientations during daylight and vice versa. Cue ranks were non-linear, so a path analysis model quantified the relative influence of each factor. Gregariousness was the most influential cue measured, although unmeasured factors had greater effects, highlighting the complexity of settlement influences in this species.

Description: Fluorescence excitation-emission matrices showed the spectral signature of dissolved organic matter (DOM) downstream in the River Tet at all seasons corresponding to humic substances with maximum fluorescence emission em=420-460nm for excitations of ex=340-360nm and the occasional presence of tryptophan, tracer of anthropogenic pressure, spectroscopically identified by ex/em=310/350nm. A factorial discriminant analysis, performed using the parameters selected (ex/em pairs of wavelength), succeeded in a better discrimination of seasons than stations, and clearly showed the presence of two fluorophores. Fluorophore 1, with two absorption bands: ex=260-320nm and 330-390nm for em=440-500nm, and Fluorophore 2, with one absorption band: ex=300-360nm for em=410nm, which are attributed to humic acid (HA) and fulvic acid (FA), respectively. Variations of DOM relative contents downstream in the River Tet, according to seasons and stations, showed high amounts of DOM (pedogenic character) along the river in the humid period, with the highest value obtained in the mountain section. In contrast, in summer, the DOM contents were low (aquagenic character). Moreover, DOM presents a relatively constant composition with a percentage of FA ranging from 40% at the mountain station to 48% at the mouth river, whatever the season.

Description: A characteristic feature of global warming is the land-sea contrast, with stronger warming over land than over oceans. Recent studies find that this land-sea contrast also exists in equilibrium global change scenarios, and it is caused by differences in the availability of surface moisture over land and oceans. In this study it is illustrated that this land-sea contrast exists also on interannual time scales and that the ocean-land interaction is strongly asymmetric. The land surface temperature is more sensitive to the oceans than the oceans are to the land surface temperature, which is related to the processes causing the land-sea contrast in global warming scenarios. It suggests that the ocean's natural variability and change is leading to variability and change with enhanced magnitudes over the continents, causing much of the longer-time-scale (decadal) global-scale continental climate variability. Model simulations illustrate that continental warming due to anthropogenic forcing (e. g., the warming at the end of the last century or future climate change scenarios) is mostly (80%-90%) indirectly forced by the contemporaneous ocean warming, not directly by local radiative forcing.

Description: Submarine mud volcanism represents an important. pathway for methane from deeper reservoirs to the surface, where it enters the benthic carbon cycle. To quantify overall methane release from the Captain Arutyunov mud volcano (CAMV) and to assess the contribution of macrobenthic seep organisms to the regulation of the benthic methane flux, we linked water column methane concentrations, seabed methane emission and pore water geochemistry to the spatial distribution of seep biota. Prominent organisms of the CAMV seep biota were 3 different species of frenulate tubeworms. Seabed methane emission ranged from 0.001 to 0.66 mmol m(-2) d(-1). Dense patches of tubeworms were associated with the lowest seabed methane emission. Elevated methane emission was associated with a sporadic distribution of tubeworms and the occurrence of numerous mud clasts. Despite the presence of a large subsurface methane reservoir, the estimated total methane release from CAMV was low (0.006 x 10(6) mol yr(-1)). In addition to direct methane consumption by Siboglinum poseidoni, the tubeworms likely contribute to the retention of methane carbon in the sediment by affecting bacterial communities in the proximity of the tubes. The siboglinids create new meso-scale habitats on the sediment Surface, increasing habitat heterogeneity and introducing niches for bacterial communities.

Description: Since early 2008, an increasing number of countries have ratified an international treaty to ban the application of antifouling (AF) coatings based on organotin compounds (eg tributyltin (TBT) and triphenyltin). As a result, the demand for environmentally friendly, non-toxic or low-toxicity AF compounds and technologies (green AF agents) has become an urgent reality. Marine coatings based on Cu2O and various other biocides have a negative impact on the environment and they must eventually be replaced by new, effective, and environmentally friendly AF compounds. This mini-review describes important AF compounds discovered from a variety of organisms from 2004 until mid 2009, and discusses recent and general trends in the discovery of AF compounds. Finally, a perspective on the future of AF compound development is presented. The discussion is aimed at updating scientists and engineers on the current challenges facing AF research.

Description: The presented study assessed the heavy metal contamination risk in a former sludge deposit field of the River Ruhr in Essen, Germany. Therefore, the temporal and spatial distribution in soils and plants, chemical fractionation, mobilization potential, and transfer characteristics have been investigated. Soil samples, roots and shoots of rushes (Juncus sp.), and stem wood disks of willows (Salix sp.) were analyzed for Zn, Cu, Pb, Ni, Cr, and Cd. Plant available and mobile heavy metal portions have been determined using a sequential extraction procedure. The results show that the soils and the rushes are highly contaminated, although there is a considerable decrease compared to initial concentrations some 20 years ago. The willows show only small heavy metal enrichment. pH induced mobilization potential in soil is high for Cd, Zn and Ni. Additionally, these elements contain high portions of plant-available fractions. High transfer rates from soil to roots and very high rates from roots to shoots of rushes have been determined for Cd and Zn, indicating an accumulation of these elements in shoots of rushes. The rushes reflect the temporal and spatial heavy metal distribution in soil and might thus be used as a bioindicator or for phytoremediation.

Description: Atmospheric pressure observations from the Southern Hemisphere are used to estimate monthly and annually averaged indexes of the southern annular mode (SAM) back to 1884. This analysis groups all relevant observations in the following four regions: one for Antarctica and three in the subtropical zone. Continuous surface pressure observations are available at a number of locations in the subtropical regions since the end of the nineteenth century. However, year-round observations in the subpolar region near the Antarctic continent began only during the 1940-60 period. The shorter Antarctic records seriously compromise the length of a traditionally estimated SAM index. To improve the situation "proxy'' estimates of Antarctic sea level pressure anomalies are provided based on the concept of atmospheric mass conservation poleward of 208S. This allows deriving a longer SAM index back to 1884. Several aspects of the new record, its statistical properties, seasonal trends, and the regional pressure anomaly correlations, are presented.

Description: Statistical analysis of observations (including atmospheric reanalysis and forced ocean model simulations) is used to address two questions: First, does an analogous mechanism to that of El Niño–Southern Oscillation (ENSO) exist in the equatorial Atlantic or Indian Ocean? Second, does the intrinsic variability in these basins matter for ENSO predictability? These questions are addressed by assessing the existence and strength of the Bjerknes and delayed negative feedbacks in each tropical basin, and by fitting conceptual recharge oscillator models, both with and without interactions among the basins. In the equatorial Atlantic the Bjerknes and delayed negative feedbacks exist, although weaker than in the Pacific. Equatorial Atlantic variability is well described by the recharge oscillator model, with an oscillatory mixed ocean dynamics–sea surface temperature (SST) mode present in boreal spring and summer. The dynamics of the tropical Indian Ocean, however, appear to be quite different: no recharge–discharge mechanism is found. Although a positive Bjerknes-like feedback from July to September is found, the role of heat content seems secondary. Results also show that Indian Ocean interaction with ENSO tends to damp the ENSO oscillation and is responsible for a frequency shift to shorter periods. However, the retrospective forecast skill of the conceptual model is hardly improved by explicitly including Indian Ocean SST. The interaction between ENSO and the equatorial Atlantic variability is weaker. However, a feedback from the Atlantic on ENSO appears to exist, which slightly improves the retrospective forecast skill of the conceptual model.

Description: Epibacterial communities on thalli of the algal species Fucus serratus, Fucus vesiculosus, Laminaria saccharina, Ulva compressa, Delesseria sanguinea and Phycodrys rubens were analysed using 16S ribosomal RNA gene-based DGGE. Individuals of all species were collected in the Kiel Fjord (Baltic Sea) and in the rocky intertidal of Helgoland (North Sea). DGGE gels as well as cluster and multidimensional scaling analysis based on the DGGE band patterns of the epibacterial community showed significant differences between the epibacterial communities on the investigated algal species both in the Baltic and North Seas. Epibacterial communities differed less between regions than between host species, and were more similar on closely related host species. Results give the first evidence for lineage-specific bacterial associations to algal thalli. Furthermore, the results suggest that these algal species may control their epibiotic bacterial communities.

Description: Draft regulations for prospecting and exploration of polymetallic sulphides in the “Area” are currently being considered for implementation by the International Seabed Authority. This paper examines possible models for allocation of lease blocks for exploration and the proposed schedule for relinquishing blocks during the exploration phase. One model for granting of exploration licenses under the proposed regulations involves contiguous lease blocks, similar to that being considered for nodules and crusts; another model involves non-contiguous blocks. An analysis of the occurrence and distribution of known polymetallic sulphides in 32 training areas shows that the regulations for prospecting and exploration of crusts likely cannot be applied equally to polymetallic sulphides.

Description: A wide variety of terrestrial biomass feed stocks have been identified as suitable candidates for fractionation and conversion into biofuels. In particular, microalgae have been promoted as a future source of transportation fuels primarily because of their stated potential to produce up to 10 times more oil per acre than traditional biofuel crops. Their ability to grow relatively fast, be harvested on a daily basis, and grown in earthen ponds or closed photobioreactors that occupy marginal or poor crop lands using salt or brackish water, are often referenced. When these attractive traits are coupled with the potential to concomitantly harvest valuable co‐products such as biopolymers, proteins, and animal feeds, one can see why microalgae are often touted as biotechnology's “green gold”. The development of large‐scale microalgae farms, however, has been slowed by limitations in downstream processing technology. For example, traditional methods to dewater, extract, and recover bio‐oil from oil‐seeds possess little utility for microalgae. The extreme requirement of dewatering poses tremendous hurdles for any technology processing biofuels from microalgae. To further complicate matters, identifying the most appropriate paths for appropriate extraction technology depends heavily on the microalgal species and its cultivation status, both of which are highly characterized for higher plants as compared to microalgae. In this review we discuss existing extraction methodologies as they have and can be applied to microalgae. Commentary is provided on their potential as a unit operation that exists within the framework of an industrial‐scale microalgal cultivation process that extends from the production of biomass in photobioreactors to the fractionation of the recovered bio‐oil.

Description: Cephalopods are increasingly acknowledged as an ecologically important group in Chilean ecosystems, but are also one of their less-known biogeographic components. Notably, this group is represented virtually exclusively by non-endemic species, although we hypothesized that their distribution over the coast should be constrained by similar physical determinants to those affecting endemic taxa. We thus present a first evaluation of the latitudinal patterns of diversity and distribution of cephalopod species in Chile, based on geographical data obtained from a review of the available literature. We constructed presence–absence binary matrices of coastal and oceanic species in 20 latitudinal units (2°), for then calculating the respective similarity matrices to obtain a distribution dendrogram using hierarchical cluster analysis (UPGM). The original binary matrices were resampled performing 1000 stochastic reassignments to calculating the 95th percentile as the criterion to identify significant clusters. Statistical comparisons between distributional groupings were performed using ANOSIM. We recorded 86 cephalopods in Chile, including oceanic (71) and coastal (15) species. Species richness showed two major breaks at 30° S and 42° S, and decreased toward higher latitudes. Cephalopod species showed well-defined endpoints of distribution within the Chilean coast, differentiating three main biogeographical units: northern (18–30° S), central (30–42° S) and southern (42–56° S) areas. Biogeographical patterns of cephalopod species in Chile showed no particular difference with those already described for most Chilean taxa. The marked distribution breaks of cephalopods at 30° and 42° S suggest that external forcing and physical factors other than temperature gradients may strongly constrain their dispersal.

Description: The cirrate octopod Stauroteuthis syrtensis is a mesopelagic species commonly collected in the North Atlantic. Individuals were observed at depths 〉600 m and typically within 100 m of the bottom in three ~900 m deep canyons indenting the southern edge of Georges Bank. When first sighted, most octopods were floating passively with their webbed arms gathered into a small ball. When disturbed, they expanded their webs to form a ‘balloon’ shape, swam slowly by sculling their fins, pulsed their webs like medusae and, in some cases, streamlined their arms and webs and moved away smoothly by rapidly sculling their fins. The bodies of 9 octopods comprised 92 to 95% water, with tissue containing 9 to 22% carbon (C) and 2 to 4% nitrogen (N). These values were similar to those reported for medusae and ctenophores. Oxygen (O2) consumption rates of 4.6 to 25.8 µmol O2 g–1 C h–1 were within ranges reported for medusae, ctenophores, and deep-water cephalopods. The stomachs of S. syrtensis, dissected immediately after capture, contained only the calanoid copepod Calanus finmarchicus. Calculations indicated that S. syrtensis need 1.3 to 30.1 ind. d–1 of C. finmarchicus to meet their measured metabolic demand. Excretion rates (0.3 to 12.4 µg NH4+ g–1 C h–1 and 0.06 to 4.83 µg PO43– g–1 C h–1) were at least an order of magnitude lower than rates reported for other octopods or gelatinous zooplankters. O:N ratios (11 to 366) suggested that S. syrtensis catabolized lipids, which may be supplied by C. finmarchicus. Vertical distribution, relatively torpid behavior and low metabolic rates characterized S. syrtensis as a benthopelagic and relatively passive predator on copepods.

Description: The North Pacific Ocean population of the neon flying squid Ommastrephes bartramii, which undertakes seasonal north–south migrations, consists of autumn and winter–spring spawning cohorts. We examined life history differences between the 2 cohorts in relation to the oceanographic environment. The differences could be explained by seasonal north–south movements of the following 2 oceanographic zones: (1) the optimum spawning zone defined by sea surface temperatures; and (2) the food-rich zone defined by the position of the transition zone chlorophyll front (TZCF). The 2 cohorts use the food-rich zone in different phases of their life cycles. The spawning grounds for the autumn cohort occur within the subtropical frontal zone (STFZ), characterized by enhanced productivity in winter due to its proximity to the TZCF, whereas the spawning grounds for the winter–spring cohort occur within the subtropical domain, which is less productive. As the TZCF shifts northward in spring, the autumn cohort continues to occur in the productive area north of the TZCF, whereas the winter–spring cohort remains in the less productive area to the south until it migrates into productive waters north of the TZCF in the summer or autumn. Consequently, the autumn cohort grows faster than the winter–spring cohort during the first half of its life cycle, whereas the winter–spring cohort grows faster during the second half. This growth pattern may be responsible for differing migration patterns; males of the autumn cohort do not have to migrate given their early fast growth in the STFZ, whereas those of the winter–spring cohort must migrate to the food-rich subarctic frontal zone to compensate for their slow growth. These biological and ecological differences between the 2 cohorts suggest flexibility of their life history response to oceanographic environments.

Description: The Agulhas Current system has been analyzed in a nested high-resolution ocean model and compared to observations. The model shows good performance in the western boundary current structure and the transports off the South African coast. This includes the simulation of the northward-flowing Agulhas Undercurrent. It is demonstrated that fluctuations of the Agulhas Current and Undercurrent around 50–70 days are due to Natal pulses and Mozambique eddies propagating downstream. A sensitivity experiment that excludes those upstream perturbations significantly reduces the variability as well as the mean transport of the undercurrent. Although the model simulates undercurrents in the Mozambique Channel and east of Madagascar, there is no direct connection between those and the Agulhas Undercurrent. Virtual float releases demonstrate that topography is effectively blocking the flow toward the north.

Description: For the first time, an analytical theory and a very high-resolution, frontal numerical model, both based on the unsteady, nonlinear, reduced-gravity shallow water equations on a beta plane, have been used to investigate aspects of the migration of homogeneous surface, frontal warm-core eddies on a beta plane. Under the assumption that, initially, such vortices are surface circular anticyclones of paraboloidal shape and having both radial and azimuthal velocities that are linearly dependent on the radial coordinate (i.e., circular pulsons of the first order), approximate analytical expressions are found that describe the nonstationary trajectories of their centers of mass for an initial stage as well as for a mature stage of their westward migration. In particular, near-inertial oscillations are evident in the initial migration stage, whose amplitude linearly increases with time, as a result of the unbalanced vortex initial state on a beta plane. Such an initial amplification of the vortex oscillations is actually found in the first stage of the evolution of warm-core frontal eddies simulated numerically by means of a frontal numerical model initialized using the shape and velocity fields of circular pulsons of the first order. In the numerical simulations, this stage is followed by an adjusted, complex nonstationary state characterized by a noticeable asymmetry in the meridional component of the vortex's horizontal pressure gradient, which develops to compensate for the variations of the Coriolis parameter with latitude. Accordingly, the location of the simulated vortex's maximum depth is always found poleward of the location of the simulated vortex's center of mass. Moreover, during the adjusted stage, near-inertial oscillations emerge that largely deviate from the exactly inertial ones characterizing analytical circular pulsons: a superinertial and a subinertial oscillation in fact appear, and their frequency difference is found to be an increasing function of latitude. A comparison between vortex westward drifts simulated numerically at different latitudes for different vortex radii and pulsation strengths and the corresponding drifts obtained using existing formulas shows that, initially, the simulated vortex drifts correspond to the fastest predicted ones in many realistic cases. As time elapses, however, the development of a beta-adjusted vortex structure, together with the effects of numerical dissipation, tend to slow down the simulated vortex drift.

Description: Wind-induced near-inertial energy has been believed to be an important source for generating the ocean mixing required to maintain the global meridional overturning circulation. In the present study, the near-inertial energy budget in a realistic (1)/(12)degrees model of the North Atlantic Ocean driven by synoptically varying wind forcing is examined. The authors find that nearly 70% of the wind-induced near-inertial energy at the sea surface is lost to turbulent mixing within the top 200 m and, hence, is not available to generate diapycnal mixing at greater depth. Assuming this result can be extended to the global ocean, it is estimated that the wind-induced near-inertial energy available for ocean mixing at depth is, at most, 0.1 TW. This confirms a recent suggestion that the role of wind-induced near-inertial energy in sustaining the global overturning circulation might have been overemphasized.

Description: Highly stratified marine ecosystems with dynamic features such as fronts or clines in salinity, temperature, or oxygen concentration challenge an individual’s ability to select suitable living conditions. Ultimately, environmental heterogeneity organizes the spatial distributions of populations and hence the spatial structure of the ecosystem. Our aim here is to present a method to resolve small-scale distribution on an individual level, as needed for the behaviorally-based prediction of habitat choice and limits. We focused on the small-scale vertical distribution of cod Gadus morhua L. in the Bornholm Basin, central Baltic Sea, during spawning time in 2 years with different vertical thermohaline and oxygen stratifications. Individual cod were identified by echotracking of real-time in situ hydroacoustic distribution data. In order to resolve and identify hydrographic preferences and limits, ambient parameters including temperature, salinity, and oxygen concentration as well as expected egg-survival probability were individually allocated to each fish. The vertical distribution of hydroacoustically identified fish was compared to data simultaneously recorded by data storage tags attached to cod. The results showed a clear influence of ambient salinity and oxygen concentration on the distribution pattern and distributional limitation of cod during spawning time, and also consistency of data storage tag-derived distribution patterns with those based on individual echotracking. We therefore consider this method to be a useful tool to analyze individual behavior and its implications for the population’s spatial distribution in stratified environments.

Description: Phytoplankton supply the base of the marine food web and drive the biogeochemical cycles of carbon and nutrients. Over much of the ocean, their growth is limited by their uptake of nitrogen (as nitrate), which has most commonly been described by the hyperbolic Michaelis-Menten (MM) equation. However, the lack of a theory to explain variations in MM constants has hindered our ability to predict the response of marine ecosystems to changes in environmental conditions. The MM equation fits data from short-term experiments well, but does not agree with steady-state experiments over wide ranges of nutrient concentrations. In contrast, the recently developed optimal uptake kinetics (OU) does agree with the latter and can also describe the observed pattern of MM half-saturation constants from field. experiments. OU kinetics explains the observed pattern of N uptake as the result of a general physiological trade-off between nutrient uptake capacity and affinity. The existence of a general trade-off would imply a relatively high degree of predictability in the response of nutrient uptake to changing nutrient concentrations and thus provide a basis for predicting effects of climate change on marine ecosystems and biogeochemical cycles.

Description: A new field of study, "decadal prediction," is emerging in climate science. Decadal prediction lies between seasonal/interannual forecasting and longer-term climate change projections, and focuses on time-evolving regional climate conditions over the next 10-30 yr. Numerous assessments of climate information user needs have identified this time scale as being important to infrastructure planners, water resource managers, and many others. It is central to the information portfolio required to adapt effectively to and through climatic changes. At least three factors influence time-evolving regional climate at the decadal time scale: 1) climate change commitment (further warming as the coupled climate system comes into adjustment with increases of greenhouse gases that have already occurred), 2) external forcing, particularly from future increases of greenhouse gases and recovery of the ozone hole, and 3) internally generated variability. Some decadal prediction skill has been demonstrated to arise from the first two of these factors, and there is evidence that initialized coupled climate models can capture mechanisms of internally generated decadal climate variations, thus increasing predictive skill globally and particularly regionally. Several methods have been proposed for initializing global coupled climate models for decadal predictions, all of which involve global time-evolving threedimensional ocean data, including temperature and salinity. An experimental framework to address decadal predictability/prediction is described in this paper and has been incorporated into the coordinated Coupled Model Intercomparison Model, phase 5 (CMIP5) experiments, some of which will be assessed for the IPCC Fifth Assessment Report (AR5). These experiments will likely guide work in this emerging field over the next 5 yr.

Description: Symptoms characteristic of wasting disease, thought to result from infection by protozoan pathogens (i.e. Labyrinthula spp.), are a common phenomenon affecting seagrass species worldwide. However relatively little is known about factors that control the survival and success of Labyrinthula in part due to the difficulty associated with quantifying the growth of this organism. Here we describe a simple and inexpensive method for measuring growth of Labyrinthula in liquid culture that takes into consideration both cell density and areal spread. The technique allows for examination of the effects of both abiotic and biotic factors on the growth of Labyrinthula apart from its seagrass host, separating the effects of environmental condition on the host from their effects on the pathogen.

Description: Particulate (POM) and dissolved organic matter (DOM) released by the cold water corals Lophelia pertusa (L.) and Madrepora oculata (L.) was collected, analysed and quantitatively compared to that released by warm water reef-building corals. Particulate nitrogen (PN) and particulate organic carbon (POC) release rates of L. pertusa were 0.14 ± 0.07 mg N m–2 h–1 and 1.43 ± 1.22 mg C m–2 h–1, respectively, which is in the lower range of POM release rates measured for warm water corals, while dissolved organic carbon (DOC) release was 47 ± 19 mg C m–2 h–1. The resulting high DOC:POC ratio indicates that most cold water coral-derived organic matter immediately dissolved in the water column. Cold water corals, similar to their warm water counterparts, produced large amounts of nitrogen-rich coral mucus with C:N ratios of 5 to 7 for Lophelia- and 7 to 9 for Madrepora-derived mucus. A 7-fold increase in the oxygen consumption rates in cold water coral mucus-amended seawater containing the natural microbial assemblage indicates that this organic matter provided an attractive food source for pelagic microbes. In situ investigations at Røst Reef, Norway, showed that microbial activity in the seawater closest to the reef was 10 times higher than in the overlying water column. This suggests that cold water corals can stimulate microbial activity in the direct reef vicinity by the release of easily degradable and nutrient-rich organic matter, which may thereby function as a vector for carbon and nutrient cycling via the microbial loop in cold water coral reef systems.

Description: Sediments of upwelling regions off Namibia, Peru, and Chile contain dense populations of large nitrate-storing sulfide-oxidizing bacteria, Thiomargarita, Beggiatoa, and Thioploca. Increased contents of monounsaturated C16 and C18 fatty acids have been found at all stations studied, especially when a high density of sulfide oxidizers in the sediments was observed. The distribution of lipid biomarkers attributed to sulfate reducers (10MeC16:0 fatty acid, ai-C15:0 fatty acid, and mono-O-alkyl glycerol ethers) compared to the distribution of sulfide oxidizers indicate a close association between these bacteria. As a consequence, the distributions of sulfate reducers in sediments of Namibia, Peru, and Chile are closely related to differences in the motility of the various sulfide oxidizers at the three study sites. Depth profiles of mono-O-alkyl glycerol ethers have been found to correlate best with the occurrence of large sulfide-oxidizing bacteria. This suggests a particularly close link between mono-O-alkyl glycerol ether-synthesizing sulfate reducers and sulfide oxidizers. The interaction between sulfide-oxidizing bacteria and sulfate-reducing bacteria reveals intense sulfur cycling and degradation of organic matter in different sediment depths.

Description: The recent introduction of Gracilaria vermiculophylla (Rhodophyta) to the Kiel Fjord area was a reason for concern, since this red macroalga performs best under mesohaline conditions and thus appears well adapted to thrive and spread in the Baltic Sea environment, A systematic survey on a coastal range of 500 km in 2006 and 2007 indicated considerable Multiplication and spreading of G. vermiculophylla within Kiel Fjord, but provided little evidence of long-distance transport. Nonetheless, flow-through growth experiments conducted at a range of salinities under ambient light showed that G. vermiculophylla should be able to grow in most of the Baltic Sea. Growth declined only below a salinity of 5.5. High water temperatures in summer seem to reduce resistance against low salinity. Growth of G, vermiculophylla in the SW Baltic is limited by light and is only possible during summer and above a depth of 3 m. Drifting fragments are dispersed by currents. Either they sink to deeper waters, where they degrade, or they accumulate in shallow and sheltered waters, where they form perennial mats. These overgrow not only soft bottom sediments, but also stones, which are an important habitat to Fucus vesiculosus, the main native perennial alga in the Baltic Sea. As compared to F. vesiculosus, G. vermiculophylla seems to represent a preferred refuge for mesograzers and other invertebrates, particularly in winter. Nonetheless, feeding trials showed that potential grazers avoided G. vermiculophylla relative to F vesiculosus. Daily biomass uptake by grazers associated with G. vermiculophylla in nature did not exceed 2 g kg(-1) and is 〈11% of average daily net growth (18.5 g kg(-1)) in the first 2 m below sea level. Consequently, feeding may not be sufficient to control the spread of G. vermiculophylla in the SW Baltic. Our study suggests that absence of feeding enemies and adaptation to brackish water may allow G. vermiculophylla to invade most shallow coastal waters of the inner Baltic Sea despite light limitation.

Description: Ocean acidification and associated changes in seawater carbonate chemistry negatively influence calcification processes and depress metabolism in many calcifying marine invertebrates. We present data on the cephalopod mollusc Sepia officinalis, an invertebrate that is capable of not only maintaining calcification, but also growth rates and metabolism when exposed to elevated partial pressures of carbon dioxide (pCO(2)). During a 6 wk period, juvenile S. officinalis maintained calcification under similar to 4000 and similar to 6000 ppm CO2, and grew at the same rate with the same gross growth efficiency as did control animals. They gained approximately 4%, body mass daily and increased the mass of their calcified cuttlebone by over 500 %. We conclude that active cephalopods possess a certain level of pre-adaptation to long-term increments in carbon dioxide levels. Our general understanding of the mechanistic processes that limit calcification must improve before we can begin to predict what effects future ocean acidification will have on calcifying marine invertebrates.

Description: Effects of global warming on marine ecosystems are far less understood than they are in terrestrial environments. Macrophyte-based coastal ecosystems are particularly vulnerable to global warming, because they often lack species redundancy. We tested whether summer heat waves have negative effects on an ecologically important ecosystem engineer, the eelgrass Zostera marina L., and whether high genotypic diversity may provide resilience in the face of climatic extremes. In a mesocosm experiment, we manipulated genotypic diversity of eelgrass patches fully crossed with water temperature (control vs. temperature stress) over 5 mo. We found a strong negative effect of warming and a positive effect of genotypic diversity on shoot densities of eelgrass. These results suggest that eelgrass meadows and associated ecosystem services will be negatively affected by predicted increases in summer temperature extremes. Genotypic diversity may provide critical response diversity for maintaining seagrass ecosystem functioning, and for adaptation to environmental change.

Description: Recent observations show dramatic changes of the Arctic atmosphere–ice–ocean system. Here the authors demonstrate, through the analysis of a vast collection of previously unsynthesized observational data, that over the twentieth century the central Arctic Ocean became increasingly saltier with a rate of freshwater loss of 239 ± 270 km3 decade−1. In contrast, long-term (1920–2003) freshwater content (FWC) trends over the Siberian shelf show a general freshening tendency with a rate of 29 ± 50 km3 decade−1. These FWC trends are modulated by strong multidecadal variability with sustained and widespread patterns. Associated with this variability, the FWC record shows two periods in the 1920s–30s and in recent decades when the central Arctic Ocean was saltier, and two periods in the earlier century and in the 1940s–70s when it was fresher. The current analysis of potential causes for the recent central Arctic Ocean salinification suggests that the FWC anomalies generated on Arctic shelves (including anomalies resulting from river discharge inputs) and those caused by net atmospheric precipitation were too small to trigger long-term FWC variations in the central Arctic Ocean; to the contrary, they tend to moderate the observed long-term central-basin FWC changes. Variability of the intermediate Atlantic Water did not have apparent impact on changes of the upper–Arctic Ocean water masses. The authors’ estimates suggest that ice production and sustained draining of freshwater from the Arctic Ocean in response to winds are the key contributors to the salinification of the upper Arctic Ocean over recent decades. Strength of the export of Arctic ice and water controls the supply of Arctic freshwater to subpolar basins while the intensity of the Arctic Ocean FWC anomalies is of less importance. Observational data demonstrate striking coherent long-term variations of the key Arctic climate parameters and strong coupling of long-term changes in the Arctic–North Atlantic climate system. Finally, since the high-latitude freshwater plays a crucial role in establishing and regulating global thermohaline circulation, the long-term variations of the freshwater content discussed here should be considered when assessing climate change and variability.

Description: Data from an array of six moorings deployed east of Abaco, Bahamas, along 26.5°N during March 2004–May 2005 are analyzed. These moorings formed the western boundary array of a transbasin observing system designed to continuously monitor the meridional overturning circulation and meridional heat flux in the subtropical North Atlantic, under the framework of the joint U.K.–U.S. Rapid Climate Change (RAPID)–Meridional Overturning Circulation (MOC) Program. Important features of the western boundary circulation include the southward-flowing deep western boundary current (DWBC) below 1000 m and the northward-flowing “Antilles” Current in the upper 1000 m. Transports in the western boundary layer are estimated from direct current meter observations and from dynamic height moorings that measure the spatially integrated geostrophic flow between moorings. The results of these methods are combined to estimate the time-varying transports in the upper and deep ocean over the width of the western boundary layer to a distance of 500 km offshore of the Bahamas escarpment. The net southward transport of the DWBC across this region, inclusive of northward deep recirculation, is −26.5 Sv (Sv ≡ 106 m3 s−1), which is divided nearly equally between upper (−13.9 Sv) and lower (−12.6 Sv) North Atlantic Deep Water (NADW). In the top 1000 m, 6.0 Sv flows northward in a thermocline-intensified jet near the western boundary. These transports are found to agree well with historical current meter data in the region collected between 1986 and 1997. Variability in both shallow and deep components of the circulation is large, with transports above 1000 m varying between −15 and +25 Sv and deep transports varying between −60 and +3 Sv. Much of this transport variability, associated with barotropic fluctuations, occurs on relatively short time scales of several days to a few weeks. Upon removal of the barotropic fluctuations, slower baroclinic transport variations are revealed, including a temporary stoppage of the lower NADW transport in the DWBC during November 2004.

Description: A tangent linear adjoint for a low-resolution dynamical model of the atmosphere is used to derive the optimal forcing perturbations for all state variables such that after a specified lead time the model response has a given projection, in terms of an energy norm, on the pattern associated with the 51-yr trend in the Northern Hemisphere winter tropospheric circulation, 1948/49–1998/99. A feature of the derived forcing sensitivity is a Rossby wave–like feature that emanates from the western tropical Pacific and is associated with the deepening of the Aleutian low, whereas an annular pattern in the forcing sensitivity in the uppermost model level is shown to be associated with the pattern of the trend over the Euro-Atlantic/Asian sectors, including the upward trend in the North Atlantic Oscillation index. The authors argue that the Rossby wave–type feature is consistent with studies that have argued a role for the upward trend in tropical sea surface temperature during the 51-yr period. On the other hand, the authors interpret the annular pattern in the forcing sensitivity as being consistent with studies that have argued that the trend over the Euro-Atlantic sector was associated with influences from the stratosphere. In particular, a nonlinear model driven by the optimal forcing perturbation applied only to the top model level is successful at reproducing the trend pattern with the correct amplitude in the Euro-Atlantic sector, but implies a trend over the North Pacific toward a weaker Aleutian low, contrary to what was observed but similar to the spatial pattern associated with the northern annular mode. These results show that the adjoint approach can shed light on previous apparently different interpretations of the trend. The study also presents a successful application of a tangent linear adjoint model to a climate problem.

Description: Recent observations show dramatic changes of the Arctic atmosphere–ice–ocean system. Here the authors demonstrate, through the analysis of a vast collection of previously unsynthesized observational data, that over the twentieth century the central Arctic Ocean became increasingly saltier with a rate of freshwater loss of 239 ± 270 km3 decade−1. In contrast, long-term (1920–2003) freshwater content (FWC) trends over the Siberian shelf show a general freshening tendency with a rate of 29 ± 50 km3 decade−1. These FWC trends are modulated by strong multidecadal variability with sustained and widespread patterns. Associated with this variability, the FWC record shows two periods in the 1920s–30s and in recent decades when the central Arctic Ocean was saltier, and two periods in the earlier century and in the 1940s–70s when it was fresher. The current analysis of potential causes for the recent central Arctic Ocean salinification suggests that the FWC anomalies generated on Arctic shelves (including anomalies resulting from river discharge inputs) and those caused by net atmospheric precipitation were too small to trigger long-term FWC variations in the central Arctic Ocean; to the contrary, they tend to moderate the observed long-term central-basin FWC changes. Variability of the intermediate Atlantic Water did not have apparent impact on changes of the upper–Arctic Ocean water masses. The authors’ estimates suggest that ice production and sustained draining of freshwater from the Arctic Ocean in response to winds are the key contributors to the salinification of the upper Arctic Ocean over recent decades. Strength of the export of Arctic ice and water controls the supply of Arctic freshwater to subpolar basins while the intensity of the Arctic Ocean FWC anomalies is of less importance. Observational data demonstrate striking coherent long-term variations of the key Arctic climate parameters and strong coupling of long-term changes in the Arctic–North Atlantic climate system. Finally, since the high-latitude freshwater plays a crucial role in establishing and regulating global thermohaline circulation, the long-term variations of the freshwater content discussed here should be considered when assessing climate change and variability.

Description: The diazotrophic cyanobacterium Trichodesmium is a significant contributor to marine nitrogen and carbon cycles and has been incorporated in biogeochemical ocean circulation models. To date, parameterization of light as a controlling factor for nitrogen fixation has been based on field observations, where factors other than light also affect Trichodesmium physiology. Here we present data on light-dependent (15 to 1100 µmol quanta m–2 s–1) diazotrophic growth from controlled laboratory experiments and their implications for modeling approaches. We supply a simple empirical model to describe nitrogen fixation by Trichodesmium in batch cultures. Diazotrophic growth of axenic Trichodesmium IMS-101 was light saturated at 180 µmol quanta m–2 s–1 and did not vary significantly at higher photon irradiances up to 1100 µmol quanta m–2 s–1 (μcarbon based ≈ 0.26 d–1). Chlorophyll a (chl a) normalized N2 fixation rates were significantly affected by light intensity during mid-exponential growth (0.74 to 4.45 mol N fixed mol chl a–1 h–1) over the range of photon irradiances tested. In contrast, nitrogen fixation rates normalized to the cellular carbon content were relatively unaffected by light intensity (0.42 to 0.59, averaging 0.5 mmol N mol particulate organic carbon [POC]–1 h–1). Trichodesmium carbon biomass can be used to estimate the nitrogen input by this diazotroph into the ocean; the maximum input rate is 350 nmol N fixed l–1 h–1.

Description: Multiple stable isotope and fatty acid analyses were applied to examine food web dynamics in an eelgrass Zostera marina L. system in the western Baltic Sea. Samples of eelgrass, epiphytic algae, sand microflora, red algae, phytoplankton and main consumer species were collected in June 2002. delta C-13 values of primary producers ranged from -9.6%. for eelgrass to the most depleted value of -34.9%. for the most abundant red alga, Delesseria sanguinea, Epiphyte delta C-13 (-11.3 parts per thousand.) was close to the value for eelgrass, whereas sand microflora and phytoplankton showed intermediate values (-20.0 and -22.6 parts per thousand, respectively). delta C-13 values of consumer species varied from - 12.2 parts per thousand in the gastropod Lacuna vincta to -23.9 parts per thousand in the amphipod Amphitoe rubricata. Epiphytes, sand microflora and phytoplankton had relatively similar fatty acid signatures, indicating a dominance of diatoms. Fatty acid composition of the main consumers included the biomarker fatty acids for diatoms and red algae, whereas those for eelgrass were negligible. The stable isotope data in combination with the results of the fatty acid analysis strongly indicated that the food web in this eelgrass community was based on epiphytes, sand microflora and red algae. Additionally, the continuous distribution of delta N-15 values implied a food web that was characterized by a large proportion of generalist feeders in every group of consumers and by a high degree of omnivory.

Description: Greywacke, argillite, greyschist and hypabyssal igneous rocks have been obtained from an Ocean Drilling Program core on the Queensland Plateau and from xenoliths in a volcanic breccia dredged from the crest of the Lord Howe Rise. Low to intermediate detrital quartz contents, 260 – 240 Ma K – Ar ages, and only moderately radiogenic Sr and Nd isotope compositions, suggest a correlation with the New England Orogen of eastern Australia, rather than with Australia's Lachlan Orogen or other adjacent geological provinces. Our results indicate that the New England Orogen terranes continue towards New Zealand at least as far as the southern Lord Howe Rise. The projected offshore boundaries of the major east Australian orogens are now known with more confidence, and do not appear to require any major cross-orogen offsets.

Description: The properties of the body surface play a crucial role in most interactions of marine organisms. Critical ecological properties such as drag, morphology, uptake and release of radiation and organic matter are linked to the body surface of an aquatic organism. The properties and functions of this interface may be modified substantially by the presence and activities of epibiotic communities. This, in turn, may lead to substantial modulation of the interactions between the organism bearing epiphytes and its environment, with consequences for the relative fitness of the host organism (basibiont) and its interactors, and ultimately, the structure and functioning of the assemblage. Epibiosis may act as an ecological lever via these indirect effects, greatly amplifying or buffering biotic and abiotic stress.

Description: The importance of crustal fluid chemical composition in driving the marine deep subseafloor biosphere was examined in northeast Pacific ridge-flank sediments. At IODP Site U1301, sulfate from crustal fluids diffuses into overlying sediments, forming a transition zone where sulfate meets in situ-produced methane. Enhanced cell counts and metabolic activity suggest that sulfate stimulates microbial respiration, specifically anaerobic methane oxidation coupled to sulfate reduction. Cell counts and activity are also elevated in basement-near layers. Owing to the worldwide expansion of the crustal aquifer, we postulate that crustal fluids may fuel the marine deep subseafloor biosphere on a global scale.

Description: Weight-specific growth rate (G) and growth performance (the fraction of maximum growth realized, G pf) are key demographic characteristics. The ratio of RNA/DNA (RD) can provide information on both G and G pf. Estimating G from RD in larval fish requires an adjustment for the activity of RNA at different temperatures. Based on a meta-analysis of published data, we present a general model for the relationship between G in marine fish larvae and fluorometrically derived RD and temperature (T), and suggest that this model can be used to estimate G in marine fish larvae. Several options for estimating G pf are also considered, including the use of a reference growth rate (Gref). RDs of well-fed larvae appeared to be independent of water temperatures between 4 and 28°C, suggesting that any increase in growth rate with temperature was accomplished by increased activity rather than increased concentrations of RNA. However, for the best-fit meta-analysis RD–T–G model, the relationship between RD and G pf was temperature dependent for fish less than fully fed.

Description: The causes and characteristics of interannual–decadal variability of the meridional overturning circulation (MOC) in the North Atlantic are investigated with a suite of basin-scale ocean models [the Family of Linked Atlantic Model Experiments (FLAME)] and global ocean–ice models (ORCA), varying in resolution from medium to eddy resolving (½°–1/12°), using various forcing configurations built on bulk formulations invoking atmospheric reanalysis products. Comparison of the model hindcasts indicates similar MOC variability characteristics on time scales up to a decade; both model architectures also simulate an upward trend in MOC strength between the early 1970s and mid-1990s. The causes of the MOC changes are examined by perturbation experiments aimed selectively at the response to individual forcing components. The solutions emphasize an inherently linear character of the midlatitude MOC variability by demonstrating that the anomalies of a (non–eddy resolving) hindcast simulation can be understood as a superposition of decadal and longer-term signals originating from thermohaline forcing variability, and a higher-frequency wind-driven variability. The thermohaline MOC signal is linked to the variability in subarctic deep-water formation, and rapidly progressing to the tropical Atlantic. However, throughout the subtropical and midlatitude North Atlantic, this signal is effectively masked by stronger MOC variability related to wind forcing and, especially north of 30°–35°N, by internally induced (eddy) fluctuations.

Description: The response of the phytoplankton and bacterial spring succession to the predicted warming of sea surface temperature in temperate climate zones during winter was studied using an indoor-mesocosm approach. The mesocosms were filled with winter water from the Kiel Fjord, Baltic Sea. Two of them were started at ~2°C and the temperature was subsequently increased according to the decadal temperature profile of the fjord (ΔT 0°C, baseline treatment). The other mesocosms were run at 3 elevated temperatures with differences of ΔT +2, +4 and +6°C. All mesocosms were exposed to the same light conditions. Timing of peak phytoplankton primary production (PP) during the experimental spring bloom was not significantly influenced by increasing temperatures, whereas the peak of bacterial secondary production (BSP) was accelerated by about 2 d per °C. This suggests that, in case of warming, the spring peak of bacterial degradation of organic matter (in terms of BSP) would occur earlier in the year. Furthermore, the lag time between the peaks of PP and BSP (about 16 d for ΔT 0°C) would diminish progressively at elevated temperatures. The average ratio between BSP and PP increased significantly from 0.37 in the coldest mesocosms to 0.63 in the warmest ones. Community respiration and the contribution of picoplankton (〈3 µm fraction) to this also increased at elevated temperatures. Our results lead to the prediction that climate warming during the winter/ early spring in temperate climate zones will favor bacterial degradation of organic matter by tightening the coupling between phytoplankton and bacteria. However, if PP is reduced by warming, as in our experiments, this will not necessarily lead to increased recycling of organic matter (and CO2).

Description: Octopuses of the family Octopodidae adopt two major life-history strategies. The first is the production of relatively few, large eggs resulting in well-developed hatchlings that resemble the adults and rapidly adopt the benthic habit of their parents. The second strategy is production of numerous small eggs that hatch into planktonic, free-swimming hatchlings with few suckers, simple chromatophores and transparent musculature. These distinctive planktonic stages are termed paralarvae and differ from conspecific adults in their morphology, physiology, ecology and behaviour. This study aims to review available knowledge on this subject. In benthic octopuses with planktonic stages, spawning characteristics and duration of planktonic life seem to play an important role in their dispersal capacities. Duration of the hatching period of a single egg mass can range from 2 days to 11 wk, while duration of the planktonic stage can range from 3 wk to half a year, depending on the species and temperature. Thus these paralarvae possess considerable potential for dispersal. In some species, individuals reach relatively large sizes while living as part of the micronekton of oceanic, epipelagic waters. Such forms appear to delay settlement for an unknown period that is suspected to be longer than for paralarvae in more coastal, neritic waters. During the planktonic period, paralarval octopuses feed on crustaceans as their primary prey. In addition to the protein, critical to the protein-based metabolism of octopuses (and all cephalopods), the lipid and copper contents of the prey also appear important in maintaining normal growth. Littoral and oceanic fishes are their main predators and defence behaviours may involve fast swimming speeds, use of ink decoys, dive responses and camouflage. Sensory systems of planktonic stages include photo-, mechano- and chemoreceptors controlled by a highly evolved nervous system that follows the general pattern described for adult cephalopods. On settlement, a major metamorphosis occurs in morphology, physiology and behaviour. Morphological changes associated with the settlement process include positive allometric arm growth; chromatophore, iridophore and leucophore genesis; development of skin sculptural components and a horizontal pupillary response. At the same time, animals lose the Kölliker organs that cover the body surface, the ‘lateral line system’ and the oral denticles of the beaks. Strong positive phototaxis is a common response for hatchlings and some later paralarval stages but this response reduces, disappears or reverses after settlement. There are many gaps in our knowledge of the planktonic phases of benthic octopuses. Most of our understanding of octopus paralarvae comes from studies of just two species (Octopus vulgaris and Enteroctopus dofleini) and knowledge of the vast majority of benthic octopus species with planktonic stages is considered rudimentary or non-existent. Research is needed in a variety of fields, from taxonomy to ecology. Studies of feeding and nutrition are critical in order to develop the nascent aquaculture of key species and ageing studies are necessary to understand planktonic population dynamics,particularly in commercially valuable species targeted by fisheries. Current and potential anthropogenic impacts on these early life stages of octopuses, such as pollution, overfishing and global warming, are also identified.

Description: Reproductive features of the poorly known oceanic squid Octopoteuthis sicula are described and quantified to gain insight into the reproductive biology of the species. The data are based on 39 complete and partial specimens from southern African waters, collected between 1975 and 2005. The specimens ranged in mantle length from 38 mm to 290 mm and included juveniles and mature females and males. The species shows female-biased sexual size dimorphism. Ovulation is asynchronous, indicating a repeated spawning strategy. Males transfer spermatophores presumably by using their long terminal organ. Spermatangia (discharged spermatophores) were found implanted in several parts of the body in both females and males, including in the anterior dorsal and ventral rugose, semi-gelatinous mantle tissue of maturing and mature females. This modified mantle tissue was only well developed in females. The morphologies of the spermatophore and the spermatangium of O. sicula are described. The spermatophoric reaction is reconstructed, using various stages of discharge, to provide insight into the process of intradermal implantation of spermatangia of this species.

Description: To construct in situ velocity-porosity relationships for oceanic basalt, considering crack features, P- and S-wave velocity measurements on basaltic samples obtained from the eastern flank of the Juan de Fuca Ridge were carried out under confining pressures up to 40 MPa. Assuming that the changes in velocities with confining pressures are originated by micro-crack closure, we estimated micro-crack aspect ratio spectra using the Kuster-Toksöz theory. The result demonstrates that the normalised aspect ratio spectra of the different samples have similar characteristics. From the normalised aspect ratio spectrum, we then constructed theoretical velocity-porosity relationships by calculating an aspect ratio spectrum for each porosity. In addition, by considering micro-crack closure due to confining pressure, a velocity-porosity relationship as a function of confining pressure could be obtained. The theoretical relationships that take into account the aspect ratio spectra are consistent with the observed relationships for over 100 discrete samples measured at atmospheric pressure, and the commonly observed pressure dependent relationships for a wide porosity range. The agreement between the laboratory-derived data and theoretically estimated values demonstrates that the velocity-porosity relationships of the basaltic samples obtained from the eastern flank of the Juan de Fuca Ridge, and their pressure dependence, can be described by the crack features (i.e. normalised aspect ratio spectra) and crack closure.

Description: The relative impact of the subtropical North and South Pacific Oceans on the tropical Pacific climate mean state and variability is estimated using an ocean–atmosphere–sea ice coupled general circulation model. Tailored experiments are performed in which the model is forced by idealized sea surface temperature anomalies (SSTAs) in the subtropics of both hemispheres. The main results of this study suggest that subtropical South Pacific climate variations play a dominant role in tropical Pacific decadal variability and in the decadal modulation of El Niño–Southern Oscillation (ENSO). In response to a 2°C warming in the subtropical South Pacific, the equatorial Pacific SST increases by about 0.6°C, approximately 65% larger than the change in the North Pacific experiment. The subtropics affect equatorial SST mainly through atmosphere–mixed layer interactions in the South Pacific experiments; the response is mostly accomplished within a decade. The “oceanic tunnel” dominates in the North Pacific experiments; the response takes at least 100 yr to be accomplished. Similar sensitivity experiments conducted with the stand-alone atmosphere model showed that both air–sea interactions and ocean dynamics are crucial in shaping the tropical climate response. The statistics of ENSO exhibit significant changes in amplitude and frequency in response to a warming/cooling of the subtropical South Pacific: a 2°C warming (cooling) of subtropical South Pacific SST reduces (increases) the interannual standard deviation by about 30% (20%) and shortens (lengthens) the ENSO period. The simulated changes in the equatorial zonal SST gradient are the main contributor to the modulation of ENSO variability. The simulated intensification (weakening) of the annual cycle in response to an enhanced warming (cooling) in subtropical South Pacific partly explains the shifts in frequency, but may also lead to a weaker (stronger) ENSO. The subtropical North Pacific thermal forcing did not change the statistical properties of ENSO as strongly.

Description: Ocean acidification and associated changes in seawater carbonate chemistry negatively influence calcification processes and depress metabolism in many calcifying marine invertebrates. We present data on the cephalopod mollusc Sepia officinalis, an invertebrate that is capable of not only maintaining calcification, but also growth rates and metabolism when exposed to elevated partial pressures of carbon dioxide (pCO2). During a 6 wk period, juvenile S. officinalis maintained calcification under ~4000 and ~6000 ppm CO2, and grew at the same rate with the same gross growth efficiency as did control animals. They gained approximately 4% body mass daily and increased the mass of their calcified cuttlebone by over 500%. We conclude that active cephalopods possess a certain level of pre-adaptation to long-term increments in carbon dioxide levels. Our general understanding of the mechanistic processes that limit calcification must improve before we can begin to predict what effects future ocean acidification will have on calcifying marine invertebrates.

Description: The manner in which monthly mean sea surface temperature anomalies (SSTAs) show enhanced variance at the annual period in the extratropics (an annual peak in the variance spectrum) is illustrated by observations and model simulations. A mechanism, related to the reemergence of winter SST anomalies, is proposed to explain the annual peak in SST spectrum. The idea is supported by the analysis of a hierarchy of models, including Intergovernmental Panel on Climate Change model simulations. The results of the model experiments further suggest that the annual peak is either weak or absent if decadal SST variability is forced by local air–sea interaction. However, if ocean subsurface temperature variability forces decadal SST variability, the annual peak is much stronger. Strong annual peaks may therefore be seen as an indication of ocean-forced decadal SST variability in the extratropics.

Description: The shallow subtropical–tropical cells (STC) of the Atlantic Ocean have been studied from the output fields of a 50-yr run of the German partner of the Estimating the Circulation and Climate of the Ocean (GECCO) consortium assimilation model. Comparison of GECCO with time-mean observational estimates of density and meridional currents at 10°S and 10°N, which represent the boundaries between the tropics and subtropics in GECCO, shows good agreement in transports of major currents. The variability of the GECCO wind stress in the interior at 10°S and 10°N remains consistent with the NCEP forcing, although temporary changes can be large. On pentadal and longer time scales, an STC loop response is found between the poleward Ekman divergence and STC-layer convergence at 10°S and 10°N via the Equatorial Undercurrent (EUC) at 23°W, where the divergence leads the EUC and the convergence, suggesting a “pulling” mechanism via equatorial upwelling. The divergence is also associated with changes in the eastern equatorial upper-ocean heat content. Within the STC layer, partial compensation of the western boundary current (WBC) and the interior occurs at 10°S and 10°N. For the meridional overturning circulation (MOC) at 10°S it is found that more than one-half of the variability in the upper limb can be explained by the WBC. The explained MOC variance can be increased to 85% by including the geostrophic (Sverdrup) part of the wind-driven transports.

Description: This review about the genus Laminaria sensu lato summarizes the extensive literature that has been published since the overview of the genus given by Kain in 1979. The recent proposal to divide the genus into the two genera Laminaria and Saccharina is acknowledged, but the published data are discussed under a 'sensu lato' concept, introduced here. This includes all species which have been considered to be 'Laminaria' before the division of the genus. In detail, after an introduction the review covers recent insights into phylogeny and taxonomy, and discusses morphotypes, ecotypes, population genetics and demography. It describes growth and photosynthetic performance of sporophytes with special paragraphs on the regulation of sporogenesis, regulation by endogenous rhythms, nutrient metabolism, storage products, and salinity tolerance. The biology of microstages is discussed separately. The ecology of these kelps is described with a focus on stress defence against abiotic and biotic factors and the role of Laminaria as habitat, its trophic interactions and its competition is discussed. Finally, recent developments in aquaculture are summarized. In conclusion to each section, as a perspective and guide to future research, we draw attention to the remaining gaps in the knowledge about the genus and kelps in general.

Description: For many coastal areas of the world, a decrease in abundance and depth penetration of perennial macroalgae and seagrasses has been documented and attributed to eutrophication. A surplus of nutrients impairs perennial seaweeds in at least two ways: increased phytoplankton densities reduce the depth penetration of light and in addition filamentous seaweeds and microalgae growing epiphytically shade their perennial hosts. A reduction of depth limit and total abundance has also been observed for the brown seaweed Fucus vesiculosus at many sites in the Baltic Sea. However, in most cases the mechanistic reason for the loss of Fucus has been deduced from observations rather than from experimental evidence. Here, we present results of a two-factorial (water depth/light supply and epibionts) experiment that was run in the Kiel Fjord, western Baltic, from August to October 2005. Performance of F. vesiculosus was recorded by growth and chlorophyll measurements, PI-curves and in situ measurements of the photosynthetic activity as the relative rate of electron transport (rETR). rETR and growth decreased with water depth. Chlorophyll a concentrations increased with reduced light intensities, but this apparently could not compensate for the light deficiency. Epibionts enhanced the negative effect of reduced light conditions on growth. According to these findings we estimated the physiological depth limit of F. vesiculosus in the Kiel Fjord to lie between 4 and 6 m water depth.

Description: This article analyzes the legal status of unmanned instruments (particularly, floats and gliders) for observation purposes in the ocean environment. These new kinds of instruments are being deployed by the thousands into the oceans, not the least as part of the Argo Project of the International Oceanographic Commission. Their uncontrolled drifting has raised legal questions, especially when such instruments enter waters subject to the jurisdiction of foreign states. The authors argue that the current international legal framework is insufficient to address the pertinent issues, and that a new legal regime is needed.

Description: The community composition of denitrifying bacteria was studied in the stratified water column of Lake Kinneret. The nitrite reductase genes nirS and nirK were amplified by PCR from water samples taken at 1, 14, 19 and 22 m depth, which represent the epi-, meta- and hypolimnion of the lake. The PCR products were analyzed with terminal restriction fragment length polymorphism (T-RFLP) and clone libraries. The highest diversity of nirS denitrifying communities was observed at 1 m depth. According to the T-RFLP profiles and clone libraries of nirS products, 2 groups of denitrifiers were common to and dominant in all depths. Deduced protein sequences from one of these groups displayed low identity (77%) with other nirS sequences reported in GenBank. Denitrifying bacterial communities with nirK were most diverse at 22 m and showed highest similarity to those at 19 m depth. Sequences unrelated to nirK dominated the clone libraries from 1 m depth, suggesting that denitrifying bacteria with copper-containing nitrite reductase were less frequent at this depth. The results suggest that microorganisms with nirK and those with nirS respond differently to the environmental conditions in the stratified water column of Lake Kinneret.

Description: The deep-sea smelt Bathylagus euryops, caught in July 2004 at the Charlie-Gibbs Fracture Zone (CGFZ) of the Mid-Atlantic Ridge (North Atlantic), was studied for metazoan parasites and diet composition. A total of 86 specimens with standard lengths between 6.4 and 22.1 cm (mean 13.6 cm) were examined. The parasite fauna consisted of five species: three Digenea, one Cestoda and one Nematoda. The predominant parasites were Lecithaster sp. (Digenea) and an unidentified bothriocephalidean cestode. The only nematode, Anisakis sp., occurred with a low prevalence. Bathylagus euryops at CGFZ serves as final host for the three digeneans, and as intermediate host for the cestodes and Anisakis sp. Stomach content analysis revealed a mesozooplankton crustacean diet, while 95.3% of the stomachs contained unidentified tissue.

Description: Observed sea surface temperatures (SSTs) in the North Atlantic from 1958 through 2000, as well as data from an ocean model simulation driven with the atmospheric variability observed during the same period, are examined using multichannel singular spectrum analysis. The two leading oscillatory modes are associated with a multidecadal and a quasi-decadal period. The former is connected to a basinwide uniform SST pattern and changes in the deep North Atlantic meridional overturning circulation. The quasi-decadal mode involves a tripolar SST anomaly pattern forced by atmospheric variability with a spatial structure resembling that of the North Atlantic Oscillation (NAO). The upper ocean’s dynamical response to this NAO variability provides an instantaneous positive feedback to the SST pattern, while a delayed negative feedback is due to shallow overturning circulation anomalies.

Description: The Central Indian Ocean Basin (CIOB) is the most studied basin in the Indian Ocean because of the Indian Manganese Nodules program. During the last two and half decades (and also on going), immense efforts have been made to investigate the nodule domain so as to locate the first generation nodule mine field. Over 4 million sq.km of the sea floor in the CIOB was surveyed using different samplers and echo sounders (single and multibeam). The basic requirement to identify the mine site was the abundance of the nodules (weight in kg/m2), grade of the nodule (i.e., combined percentage of Ni + Cu + Co) and the topography of the area. Various aspects related with nodules have been inspected resulting in a number of research publications, and a model derived for the growth and location of mineable ferromanganese deposits in the CIOB. Besides the ferromanganese deposits, this paper also deals with the physiographic features (seamounts, fracture zones), sediment types and on a variety of volcanics and hydrothermal materials recovered from the CIOB. It is inferred that the volcanics constitute an important part of the basin and have influenced the growth of the ferromanganese deposits. We observe that in the CIOB the presence of seamounts, types of volcanics, episodes of volcanism and altered products vis-à-vis the distribution of ferromanganese deposits are intrinsically woven and complement one another.

Description: Based upon the molecular and isotopic composition of hydrocarbons it has been proposed that the source of CH4 in Gulf of Cadiz mud volcanoes (MV) is a mixture of deep sourced thermogenic CH4 and shallow biogenic CH4. We directly investigated this possibility by comparing porewater CH4 concentrations and their δ13Cvalues with the potential for Archaeal methanogenesis in Gulf of Cadiz mud volcano (MV) sediments (Captain Arutyunov, Bonjardim, Ginsburg and Porto) using 14C-rate measurements. The CH4 has a deep sourced thermogenic origin (δ13C ∼ −49‰) but becomes 13C-depleted in and beneath the zone of anaerobic oxidation of methane (AOM) where the rates of hydrogenotrophic methanogenesis increase. Thus we infer that a portion of AOMproduced CO2 is being recycled to CH4 by methanogens yielding further 13C-depleted CH4, which might be misinterpreted as indicative of a fully shallow biogenic origin for this gas. Production of H2 is related to compositional changes in sedimentary organic matter, or to upward flux of substrate-enriched fluids. In contrast to otherMVsin the Gulf of Cadiz, GinsburgMVfluids are enriched in SO2−4 and contain very high concentrations of acetate (2478 μM below 150 cmbsf); however, the high levels of acetate did not stimulate methanogenesis but instead were oxidized to CO2 coupled to sulphate reduction. Both anaerobic oxidation of thermogenic CH4 linked to shallow methanogenesis and fluid geochemistry control the recycling of deep-sourced carbon at Gulf of Cadiz MVs, impacting near-surface δ13C-CH4 values.

Description: Force chain buckling, leading to unjamming and shear banding, is examined quantitatively via a discrete element analysis of a two-dimensional, densely-packed, cohesionless granular assembly subject to quasistatic, boundary-driven biaxial compression. A range of properties associated with the confined buckling of force chains has been established, including: degree of buckling, buckling modes, spatial and strain evolution distributions, and relative contributions to non-affine deformation, dilatation and decrease in macroscopic shear strength and potential energy. Consecutive cycles of unjamming–jamming events, akin to slip–stick events arising in other granular systems, characterize the strain-softening regime and the shear band evolution. Peaks in the dissipation rate, kinetic energy and local non-affine strain are strongly correlated: the largest peaks coincide with each unjamming event that is evident in the concurrent drops in the macroscopic shear stress and potential energy. Unjamming nucleates from the buckling of a few force chains within a small region inside the band. A specific mode of force chain buckling, prevalent in and confined to the shear band, leads to above-average levels of local non-affine strain and release of potential energy during unjamming. Ongoing studies of this and other buckling modes from a structural stability standpoint serve as the basis for the formulation of internal variables and associated evolution laws, central to the development of thermomicromechanical constitutive theory for granular materials.

Description: A simple unified critical state constitutive model for bonded geomaterials is presented in this paper. The model, which is called CASM-n, is an enhancement of an existing unified critical state model for reconstituted geomaterials (CASM). Characteristic behaviours of a bonded geomaterial such as the pre-yield higher strength and stiffness and the cohesive–frictional shearing mode in the post-yield region are taken into account and included in the reference model. The salient feature of the proposed model is the incorporation of cohesive component into the stress–dilatancy relationship. Consideration of the contribution of cohesion to plastic flow allows the modelling of delayed dilatancy and softening–contraction behaviour, which are two interesting phenomena observed in bonded geomaterials.

Description: Shortly after the advent of the first imaging passive microwave sensor on board a research satellite an anomalous climate feature was observed within the Weddell Sea. During the years 1974–1976, a 250 × 103 km2 area within the seasonal sea ice cover was virtually free of winter sea ice. This feature, the Weddell Polynya, was created as sea ice formation was inhibited by ocean convection that injected relatively warm deep water into the surface layer. Though smaller, less persistent polynyas associated with topographically induced upwelling at Maud Rise frequently form in the area, there has not been a reoccurrence of the Weddell Polynya since 1976. Archived observations of the surface layer salinity within the Weddell gyre suggest that the Weddell Polynya may have been induced by a prolonged period of negative Southern Annular Mode (SAM). During negative SAM the Weddell Sea experiences colder and drier atmospheric conditions, making for a saltier surface layer with reduced pycnocline stability. This condition enables Maud Rise upwelling to trigger sustained deep-reaching convection associated with the polynya. Since the late 1970s SAM has been close to neutral or in a positive state, resulting in warmer, wetter conditions over the Weddell Sea, forestalling repeat of the Weddell Polynya. A contributing factor to the Weddell Polynya initiation may have been a La Niña condition, which is associated with increased winter sea ice formation in the polynya area. If the surface layer is made sufficiently salty due to a prolonged negative SAM period, perhaps aided by La Niña, then Maud Rise upwelling meets with positive feedback, triggering convection, and a winter persistent Weddell Polynya.

Description: The effects of towed fishing gear on benthic fauna are under intense scrutiny and evidence is growing that trawling may significantly affect benthic communities in the North Sea. Most studies explore the current fauna or compare today’s situation with that of 2 or 3 decades ago, when North Sea-wide information on benthos and fishing became available. However, in the North Sea, extensive mechanised trawling began more than a century ago. This study compared historical and recent records in order to explore potential long-term links between changes in the epibenthos and fishing. Based on reconstructed species lists from museum specimens, we compared epibenthos data from 1902 to 1912 with those from 1982 to 1985 and 2000. We analysed changes in average taxonomic distinctness (AvTD), a biodiversity indicator, and changes in biogeographical species distributions. Landings data were collated for round- and flatfish caught in the northern, central and southern North Sea from 1906 to 2000 as proxies for total otter and beam trawl effort, respectively. These indicate that the southern and much of the central North Sea were fished intensively throughout the 20th century, whilst the northern North Sea was less exploited, especially in earlier decades; exploitation intensified markedly from the 1960s onwards. For epibenthos, the mean AvTD decreased significantly from the 1980s to 2000, when it was below expected values in 4 ICES rectangles, 3 of these located in heavily trawled areas. Biogeographical changes from the beginning to the end of the century occurred in 27 of 48 taxa. In 14 taxa, spatial presence was reduced by 50% or more, most notably in the southern and central North Sea; often these were long-lived, slow-growing species with vulnerable shells or tests. By contrast, 12 taxa doubled their spatial presence throughout the North Sea. Most biogeographical changes had happened by the 1980s. Given that other important environmental changes, including eutrophication and climate change, have gained importance mainly from the 1980s onwards, we have concluded that the changes in epibenthos observed since the beginning of the 20th century have resulted primarily from intensified fisheries.

Description: Physical and chemical properties of the water column, along with meteorological conditions were examined for their relationship with phytoplankton biomass in the Irminger Sea during late autumn and early winter. Data were collected during 2 cruises to the region in November and December 2001 and November 2002. Phytoplankton biomass was approximated by (chl a) concentrations within the water column. When examined during autumn and winter alone, the Irminger Sea was suitably described as one biogeochemical region responding to varying meteorological forcing. Hydrographic differences within the region were not observed to have a significant effect on phytoplankton growth during this period. Strong correlations with latitude were seen in chl a concentrations, physical conditions (including mixed layer depth) and meteorological forcing (including net heat flux). Variability in autumn/winter phytoplankton growth conditions appears to be driven by light limitation modulated by meteorological forcing. The temporal and spatial scales of locations sampled in 2001 represent a progression in the physical and biological conditions from late autumn to early winter. Along this ‘virtual transect’, a baseline value of approximately 0.1 mg m–3 is seen in the mean chl a concentrations within the mixed layer. We postulate that convection provides a mechanism for reduction of net losses of phytoplankton, by helping to keep phytoplankton within the mixed layer. Under such conditions, a deeper and therefore more accurate estimation of the critical depth would be valid. Evidence of the extended maintenance of phytoplankton within the mixed layer is presented in the form of the relative dominances of different phytoplankton groups.

Description: Bacteria were isolated seasonally from the Mediterranean sponges Chondrilla nucula and Petrosia ficiformis and screened for antibacterial activities. Selected isolates were taxonomically identified by 16S rRNA gene sequencing. A total of 416 different bacterial strains were isolated, 60 (14.4%) of which displayed variable degrees of antimicrobial activity. Of the bioactive strains, 58.3% were able to inhibit Staphylococcus aureus, 6.7% were active against Bacillus subtilis, 11.7% against both Enterococcus faecalis and Escherichia coli, 38.3% against Pseudoalteromonas atlantica and 33.3% against Pseudomonas elongata. 16S rRNA gene sequence analysis showed that 2 isolates, 1 from seawater samples and 1 from P. ficiformis, were most closely related to Bacillus subtilis (99% similarity) and that another isolate from P. ficiformis was most closely related to a previously described sponge-associated Alphaproteobacterium NW001 (98% similarity). Two isolates from C. nucula were most closely related to Brachybacterium paraconglomeratum (99% similarity) and Shewanella algae (89% similarity). The high percentage of bioactive isolates derived from the 2 sponges suggests that marine microorganisms, whether animal-associated or planktonic, are promising sources for drug discovery.

Description: A generalization of the transformed Eulerian and temporal residual means is presented. The new formulation uses rotational fluxes of buoyancy, and the full hierarchy of statistical density moments, to reduce the cross-isopycnal eddy flux to the physically relevant component associated with the averaged water mass properties. The resulting eddy-induced diapycnal diffusivity vanishes for adiabatic, statistically steady flow, and is related to either the growth or decay of mesoscale density variance and/or the covariance between small-scale forcing (mixing) and density fluctuations, such as that associated with the irreversible removal of density variance by dissipation. The relationship between the new formulation and previous approaches is described and is illustrated using results from an eddying channel model. The formalism is quite general and applies to all kinds of averaging and to any tracer (not just density).

Description: We investigated connections between subtropical Atlantic climate variability, atmospheric conditions in the European Alpine region (45 to 47° N and 5 to 8° E) and the interannual variability of the thermal conditions in the largest body of freshwater in Western Europe (Lake Geneva). The long-term water temperature was related to climate variability by means of a multivariate regression model. Results revealed atmospheric connections that have been elusive so far, and showed that over the period from 1959 to 2000, summer thermal conditions in Lake Geneva appear tightly linked to the long-term variability of the subtropical Atlantic climate. The multivariate model revealed high skills and tight correlations, which suggest the possibility of assessing future thermal changes in Lake Geneva from the Atlantic climate variability. The implications of such climatic forcing on the functioning of the pelagic ecosystem in Lake Geneva were illustrated by analysing the long-term changes in abundance of the summer-dominant carnivorous cladocerans Bythotrephes longimanus and Leptodora kindtii during the period 1974 to 2000. Again, the multivariate model revealed high skills and excellent correlations between the interannual changes in abundance of these species and the variability of summer climate. Our approach provides a general understanding of the interrelations between large- and regional-scale climates, local environmental conditions and the ecological responses in Lake Geneva during summer, and is therefore applicable to other retrospective studies.

Description: Using the same approach as in Part I, here it is shown how sampling problems in voluntary observing ship (VOS) data affect conclusions about interannual variations and secular changes of surface heat fluxes. The largest uncertainties in linear trend estimates are found in relatively poorly sampled regions like the high-latitude North Atlantic and North Pacific as well as the Southern Ocean, where trends can locally show opposite signs when computed from the regularly sampled and undersampled data. Spatial patterns of shorter-period interannual variability, quantified through the EOF analysis, also show remarkable differences between the regularly sampled and undersampled flux datasets in the Labrador Sea and northwest Pacific. In particular, it is shown that in the Labrador Sea region, in contrast to regularly sampled NCEP–NCAR reanalysis fluxes, VOS-like sampled NCEP–NCAR reanalysis fluxes neither show significant interannual variability nor significant trends. These regions, although quite localized covering small parts of the globe, play a crucial role for the coupled atmosphere–ocean system. In the Labrador Sea, for instance, interannual and decadal-scale changes of the surface net heat fluxes are known to affect oceanic convection and, thus, the meridional overturning circulation of the Atlantic Ocean. From a discussion of current atmospheric data assimilation systems it is argued that in poorly sampled regions reanalysis products are superior to VOS-based products for studying interannual and interdecadal variations of atmosphere–ocean interaction. In well-sampled regions, on the other hand, conclusions about surface heat flux variations are relatively insensitive to the choice of the flux products used (VOS versus reanalysis data). The results are confirmed for two different datasets, that is, ECMWF 40-yr Re-Analysis (ERA-40) data and seasonal integrations with a recent version of the ECMWF model in which no actual data were assimilated.

Description: On 19 October 2000, Hurricane Michael merged with an approaching baroclinic trough over the western North Atlantic Ocean south of Nova Scotia. As the hurricane moved over cooler sea surface temperatures (SSTs; less than 25°C), it intensified to category-2 intensity on the Saffir–Simpson hurricane scale [maximum sustained wind speeds of 44 m s−1 (85 kt)] while tapping energy from the baroclinic environment. The large “hybrid” storm made landfall on the south coast of Newfoundland with maximum sustained winds of 39 m s−1 (75 kt) causing moderate damage to coastal communities east of landfall. Hurricane Michael presented significant challenges to weather forecasters. The fundamental issue was determining which of two cyclones (a newly formed baroclinic low south of Nova Scotia or the hurricane) would become the dominant circulation center during the early stages of the extratropical transition (ET) process. Second, it was difficult to predict the intensity of the storm at landfall owing to competing factors: 1) decreasing SSTs conducive to weakening and 2) the approaching negatively tilted upper-level trough, favoring intensification. Numerical hindcast simulations using the limited-area Mesoscale Compressible Community model with synthetic vortex insertion (cyclone bogus) prior to the ET of Hurricane Michael led to a more realistic evolution of wind and pressure compared to running the model without vortex insertion. Specifically, the mesoscale model correctly simulates the hurricane as the dominant circulation center early in the transition process, versus the baroclinic low to its north, which was the favored development in the runs not employing vortex insertion. A suite of experiments is conducted to establish the sensitivity of the ET to various initial conditions, lateral driving fields, domain sizes, and model parameters. The resulting storm tracks and intensities fall within the range of the operational guidance, lending support to the possibility of improving numerical forecasts using synthetic vortex insertion prior to ET in such a model.

Description: Bimodal depth distribution patterns observed for sprat Sprattus sprattus larvae in previous field studies conducted in the deep basins of the Baltic Sea have led researchers to hypothesise that larval sprat condition was depth-dependent. We examined this hypothesis by measuring morphological, biochemical and otolith-based proxies for nutritional condition in sprat larvae collected in discrete 5 m depth intervals from the surface to the bottom in the central Bornholm Basin. Similar to earlier studies, larval sprat were most abundant in 2 depth strata (0 to 10 and 65 to 75 m). Their nutritional condition in surface and deep waters was not uniformly expressed by the different indices. For example, sprat larvae from 0 to 10 m could not be distinguished from conspecifics caught at 65 to 75 m by a long-latency condition proxy (otolith-based growth rates). Similarly, a medium-latency proxy (RNA:DNA) did not suggest differences in condition between the depths. However, short-latency proxies (protein:standard length and DNA:dry weight) supported the depth-dependent condition hypothesis. The lack of correspondence and pitfalls associated with the use and interpretation of multiple condition indices (e.g. the influences of temperature and body size) are discussed and recommendations to strengthen these various metrics are provided.

Description: The occurrence of the ctenophore Mnemiopsis leidyi as a new invasive species in the Baltic Sea and the potential consequences for fish stock recruitment was investigated in spring 2007. The study focused on the Bornholm Basin, which serves as the major spawning ground for cod and sprat, the commercially most important fish stocks in the Baltic. The distribution pattern of M. leidyi revealed a substantial overlap with cod eggs. The observed predation of M. leidyi on eggs has the potential to alter the recruitment success of cod, which is the top predator in the system and, thus, to change the Baltic food-web structure.

Description: Tropical cyclones (TC) under different climate conditions in the Northern Hemisphere have been investigated with the Max Planck Institute (MPI) coupled (ECHAM5/MPI-OM) and atmosphere (ECHAM5) climate models. The intensity and size of the TC depend crucially on resolution with higher wind speed and smaller scales at the higher resolutions. The typical size of the TC is reduced by a factor of 2.3 from T63 to T319 using the distance of the maximum wind speed from the centre of the storm as a measure. The full three-dimensional structure of the storms becomes increasingly more realistic as the resolution is increased. For the T63 resolution, three ensemble runs are explored for the period 1860 until 2100 using the IPCC SRES scenario A1B and evaluated for three 30 yr periods at the end of the 19th, 20th and 21st century, respectively. While there is no significant change between the 19th and the 20th century, there is a considerable reduction in the number of the TC by some 20% in the 21st century, but no change in the number of the more intense storms. Reduction in the number of storms occurs in all regions. A single additional experiment at T213 resolution was run for the two latter 30-yr periods. The T213 is an atmospheric only experiment using the transient sea surface temperatures (SST) of the T63 resolution experiment. Also in this case, there is a reduction by some 10% in the number of simulated TC in the 21st century compared to the 20th century but a marked increase in the number of intense storms. The number of storms with maximum wind speeds greater than 50 m s−1 increases by a third. Most of the intensification takes place in the Eastern Pacific and in the Atlantic where also the number of storms more or less stays the same. We identify two competing processes effecting TC in a warmer climate. First, the increase in the static stability and the reduced vertical circulation is suggested to contribute to the reduction in the number of storms. Second, the increase in temperature and water vapour provide more energy for the storms so that when favourable conditions occur, the higher SST and higher specific humidity will contribute to more intense storms. As the maximum intensity depends crucially on resolution, this will require higher resolution to have its full effect. The distribution of storms between different regions does not, at first approximation, depend on the temperature itself but on the distribution of the SST anomalies and their influence on the atmospheric circulation. Two additional transient experiments at T319 resolution where run for 20 yr at the end of the 20th and 21st century, respectively, using the same conditions as in the T213 experiments. The results are consistent with the T213 study. The total number of TC were similar to the T213 experiment but were generally more intense. The change from the 20th to the 21st century was also similar with fewer TC in total but with more intense cyclones.

Description: In this paper, a version of the European Centre for Medium-Range Weather Forecasts (ECMWF) operational model is used to (i) diagnose the diabatic heating associated with the winter North Atlantic Oscillation (NAO) and (ii) assess the role of this heating in the dynamics of the NAO in the model. Over the North Atlantic sector, the NAO-related diabatic heating is dominated above the planetary boundary layer by the latent heat release associated with precipitation, and within the boundary layer by vertical diffusion associated with sensible heat flux from the ocean. An association between La Niña–El Niño–type conditions in the tropical Pacific and the positive/negative NAO is found in model runs using initial conditions and sea surface temperature (SST) lower boundary conditions from the period 1982–2001, but not in a companion set of model runs for the period 1962–81. Model experiments are then described in which the NAO-related diabatic heating diagnosed from the 1982–2001 control run is applied as a constant forcing in the model temperature equation using both 1982–2001 and 1962–81 model setups. To assess the local feedback from the diabatic heating, the specified forcing is first restricted to the North Atlantic sector alone. In this case, the model response (in an ensemble mean sense) is suggestive of a weak negative feedback, but exhibits more baroclinic structure and has its centers of action shifted compared to those of the NAO. On the other hand, forcing with only the tropical Pacific part of the diabatic heating leads to a robust model response in both the 1982–2001 and 1962–81 model setups. The model response projects on to the NAO with the same sign as that used to diagnose the forcing, arguing that the link between the tropical Pacific and the NAO is real in the 1982–2001 control run. The missing link in the corresponding run for 1962–81 is a result of a change in the tropical forcing between the two periods, and not the extratropical flow regime.

Description: The depth of winter convection in the central Labrador Sea is strongly influenced by the prevailing stratification in late summer. For this late summer stratification salinity is as important as temperature, and in the upper water layers salinity even dominates. To analyze the source of the spring and summer freshening in the central region, seasonal freshwater cycles have been constructed for the interior Labrador Sea, the West Greenland Current, and the Labrador Current. It is shown that none of the local freshwater sources is responsible for the spring–summer freshening in the interior, which appears to occur in two separate events in April to May and July to September. Comparing the timing and volume estimates of the seasonal freshwater cycles of the boundary currents with the central Labrador Sea helps in understanding the origin of the interior freshwater signals. The first smaller pulse cannot be attributed clearly to either of the boundary currents. The second one is about three times stronger and supplies 60% of the seasonal summer freshwater. Transport estimates and calculated mixing properties provide evidence that its source is the West Greenland Current. The finding implies a connection also on interannual time scales between Labrador Sea surface salinity and freshwater sources in the West Greenland Current and farther upstream in the East Greenland Current. The freshwater input from the West Greenland Current thus also is the likely pathway for the known modulation of Labrador Sea Water mass formation by freshwater export from the Arctic (via the East Greenland Current), which implies some predictability on longer time scales.

Description: Multichannel singular spectrum analysis (MSSA) of surface zonal wind, sea surface temperature (SST), 20° isotherm depth, and surface zonal current observations (between 1990 and 2004) identifies three coupled ocean–atmosphere modes of variability in the tropical Pacific: the El Niño–Southern Oscillation (ENSO), the annual cycle, and a mode with a 14–18-month period, which is referred to as sub-ENSO in this study. The sub-ENSO mode accounts for the near 18-month (near annual) variability prior to (following) the 1997/98 El Niño event. It was strongest during this El Niño event, with SST anomalies exceeding 1°C. Sub-ENSO peak SST anomalies are ENSO-like in structure and are associated with eastward propagating heat content variations. However, the SST anomalies are preceded by and in near quadrature with relatively strong remotely forced westward propagating zonal current variations, suggesting the sub-ENSO mode arises from the zonal-advective feedback. The sub-ENSO mode is found to exist also in an intermediate complexity model (ICM) of the tropical Pacific. A heat budget analysis of the model’s sub-ENSO mode shows it indeed arises from the zonal-advective feedback. In the model, both ENSO and sub-ENSO modes coexist, but there is a weak nonlinear interaction between them. Experiments also show that the observed changes in sub-ENSO’s characteristics may be explained by changes in the relative importance of zonal and vertical advection SST tendencies.