ALBERT

Description: In this study, a series of drained triaxial tests were performed in order to examine the effect of cementation on the shear behavior of granular soil. It was observed that the brittle nature and dilative tendency of granular soil is dominant under a low confining stress level, while high confining stress results in a contractive behavior despite the strong cementation bond. Based on experimental results, an idealized concept is suggested to define the shear strength of cemented sand in three distinctive zones: the cementation control zone with a constant cohesion intercept at a low confining stress level, the transition zone in which the cohesion intercept is gradually reduced after a breaking point, and the stress control zone with almost zero cohesion intercept due to breakage of cementation bonds at a high confining stress level. It was shown that the sitting pressures during cementation have little effect on the strength parameters of cemented sand, while the increase of gypsum content and relative density, and the decrease of particle size, result in an increase of the cohesion intercept and the breaking point. In addition, the prediction equations for the shear strength and cohesion intercept in the cementation control zone and the transition zone are suggested from the analytical and experimental interpretation.

Description: A new 30-arc second resolution global topography/bathymetry grid (SRTM30_PLUS) has been developed from a wide variety of data sources. Land and ice topography comes from the SRTM30 and ICESat topography, respectively. Ocean bathymetry is based on a new satellite-gravity model where the gravity-to-topography ratio is calibrated using 298 million edited soundings. The main contribution of this study is the compilation and editing of the raw soundings, which come from NOAA, individual scientists, SIO, NGA, JAMSTEC, IFREMER, GEBCO, and NAVOCEANO. The gridded bathymetry is available for ftp download in the same format as the 33 tiles of SRTM30 topography. There are 33 matching tiles of source identification number to convey the provenance of every grid cell. The raw sounding data, converted to a simple common format, are also available for ftp download.

Description: Cirripedes are one of the major groups of fouling organism in the marine environment. The cyprid can, before a permanent attachment, actively explore and walk on the substratum using its antennules in a bipedal fashion without leaving the surface. Studying the structure of the cyprid antennule is therefore important for understanding the events that culminate in biofouling by barnacles. There are at present no complete, standardised accounts of the structure of the cyprid antennules in thoracican barnacles, and moreover, the existing accounts vary in their use of terminology. This article describes the cyprid antennule of the barnacle Megabalanus rosa. This barnacle species is common in E Asia, and the cyprids have previously been used in several biofouling studies. All externally visible setae on the antennules have been mapped; these comprise both chemosensors with a terminal pore, a putative aesthetasc-like seta and mechano-sensory setae. More setae were found on the attachment disc than in previous scanning electron microscope-based studies, but not all structures that can be seen with transmission electron microscopy were visible. The disc itself seems to have a variable surface area, which could assist in exploring rough surfaces. The various lengths of the antennular setae, coupled with the disposition of the segments, enable the cyprid to cover a wide swath of substratum during exploratory walking. A new terminology is proposed for cyprid antennular setae, which will form a basis for future comparative and functional studies of cirripede settlement.

Description: The Vasco—Cirene field experiment, in January—February 2007, targeted the Seychelles—Chagos thermocline ridge (SCTR) region, with the main purpose of investigating Madden—Julian Oscillation (MJO)-related SST events. The Validation of the Aeroclipper System under Convective Occurrences (Vasco) experiment (Duvel et al. 2009) and Cirene cruise were designed to provide complementary views of air—sea interaction in the SCTR region. While meteorological balloons were deployed from the Seychelles as a part of Vasco, the Research Vessel (R/V) Suroît was cruising the SCTR region as a part of Cirene. more: The Vasco—Cirene program explores how strong air—sea interactions promoted by the shallow thermocline and high sea surface temperature in the Seychelles—Chagos thermocline ridge results in marked variability at synoptic, intraseasonal, and interannual time scales. The Cirene oceanographic cruise collected oceanic, atmospheric, and air—sea flux observations in this region in January—February 2007. The contemporaneous Vasco field experiment complemented these measurements with balloon deployments from the Seychelles. Cirene also contributed to the development of the Indian Ocean observing system via deployment of a mooring and 12 Argo profilers. Unusual conditions prevailed in the Indian Ocean during January and February 2007, following the Indian Ocean dipole climate anomaly of late 2006. Cirene measurements show that the Seychelles—Chagos thermocline ridge had higher-than-usual heat content with subsurface anomalies up to 7°C. The ocean surface was warmer and fresher than average, and unusual eastward currents prevailed down to 800 m. These anomalous conditions had a major impact on tuna fishing in early 2007. Our dataset also sampled the genesis and maturation of Tropical Cyclone Dora, including high surface temperatures and a strong diurnal cycle before the cyclone, followed by a 1.5°C cooling over 10 days. Balloonborne instruments sampled the surface and boundary layer dynamics of Dora. We observed small-scale structures like dry-air layers in the atmosphere and diurnal warm layers in the near-surface ocean. The Cirene data will quantify the impact of these finescale features on the upper-ocean heat budget and atmospheric deep convection.

Description: Data from New Zealand and northern Victoria Land, Antarctica, indicate that the Cambrian Takaka Terrane intra-oceanic arc/backarc assemblage and the Bowers Terrane intra-oceanic arc/back-arc assemblage were accreted to the Gondwana margin by the Late Cambrian. Compelling similarities between the arc rocks and the immediate post-arc sediments firmly place the two regions in the same tectonic framework and imply close paleogeographic proximity. Currently, the Ross Orogen is thought to be the result of sinistral oblique convergence with west-directed subduction, and accretion of the arc assemblages is attributed to closure of backarc basins. Syntectonic fluvial conglomerates in both regions attest to the development of fluvial systems draining both the accreted arc and the contemporaneous continental margin arc. Trilobite faunas indicate that fluvial sedimentation commenced earlier in New Zealand than in northern Victoria Land. In the context of the widely accepted sinistral oblique convergence model, these data suggest an original position for New Zealand to the south of northern Victoria Land, probably in the region of the southern Ross Sea.

Description: The western Pacific subtropical high (WPSH) is closely related to Asian climate. Previous examination of changes in the WPSH found a westward extension since the late 1970s, which has contributed to the inter-decadal transition of East Asian climate. The reason for the westward extension is unknown, however. The present study suggests that this significant change of WPSH is partly due to the atmosphere's response to the observed Indian Ocean-western Pacific (IWP) warming. Coordinated by a European Union's Sixth Framework Programme, Understanding the Dynamics of the Coupled Climate System (DYNAMITE), five AGCMs were forced by identical idealized sea surface temperature patterns representative of the IWP warming and cooling. The results of these numerical experiments suggest that the negative heating in the central and eastern tropical Pacific and increased convective heating in the equatorial Indian Ocean/ Maritime Continent associated with IWP warming are in favor of the westward extension of WPSH. The SST changes in IWP influences the Walker circulation, with a subsequent reduction of convections in the tropical central and eastern Pacific, which then forces an ENSO/Gill-type response that modulates the WPSH. The monsoon diabatic heating mechanism proposed by Rodwell and Hoskins plays a secondary reinforcing role in the westward extension of WPSH. The low-level equatorial flank of WPSH is interpreted as a Kelvin response to monsoon condensational heating, while the intensified poleward flow along the western flank of WPSH is in accord with Sverdrup vorticity balance. The IWP warming has led to an expansion of the South Asian high in the upper troposphere, as seen in the reanalysis.

Description: Seasonal reconstructions of the Southern Hemisphere annular mode (SAM) index are derived to extend the record before the reanalysis period, using station sea level pressure (SLP) data as predictors. Two reconstructions using different predictands are obtained: one [Jones and Widmann (JW)] based on the first principal component (PC) of extratropical SLP and the other (Fogt) on the index of Marshall. A regional-based SAM index (Visbeck) is also considered.These predictands agree well post-1979; correlations decline in all seasons except austral summer for the full series starting in 1958. Predictand agreement is strongest in spring and summer; hence agreement between the reconstructions is highest in these seasons. The less zonally symmetric SAM structure in winter and spring influences the strength of the SAM signal over land areas, hence the number of stations included in the reconstructions. Reconstructions from 1865 were, therefore, derived in summer and autumn and from 1905 in winter and spring. This paper examines the skill of each reconstruction by comparison with observations and reanalysis data. Some of the individual peaks in the reconstructions, such as the most recent in austral summer, represent a full hemispheric SAM pattern, while others are caused by regional SLP anomalies over the locations of the predictors. The JW and Fogt reconstructions are of similar quality in summer and autumn, while in winter and spring the Marshall index is better reconstructed by Fogt than the PC index is by JW. In spring and autumn the SAM shows considerable variability prior to recent decades.

Description: Extratropical cyclones and how they may change in a warmer climate have been investigated in detail with a high-resolution version of the ECHAM5 global climate model. A spectral resolution of T213 (63 km) is used for two 32-yr periods at the end of the twentieth and twenty-first centuries and integrated for the Intergovernmental Panel on Climate Change (IPCC) A1B scenario. Extremes of pressure, vorticity, wind, and precipitation associated with the cyclones are investigated and compared with a lower-resolution simulation.Comparison with observations of extreme wind speeds indicates that the model reproduces realistic values. This study also investigates the ability of the model to simulate extratropical cyclones by computing composites of intense storms and contrasting them with the same composites from the 40-yr ECMWF Re-Analysis (ERA-40). Composites of the time evolution of intense cyclones are reproduced with great fidelity; in particular the evolution of central surface pressure is almost exactly replicated, but vorticity, maximum wind speed, and precipitation are higher in the model. Spatial composites also show that the distributions of pressure, winds, and precipitation at different stages of the cyclone life cycle compare well with those from ERA-40, as does the vertical structure. For the twenty-first century, changes in the distribution of storms are very similar to those of previous study. There is a small reduction in the number of cyclones but no significant changes in the extremes of wind and vorticity in both hemispheres. There are larger regional changes in agreement with previous studies. The largest changes are in the total precipitation, where a significant increase is seen. Cumulative precipitation along the tracks of the cyclones increases by some 11% per track, or about twice the increase in global precipitation, while the extreme precipitation is close to the globally averaged increase in column water vapor (some 27%). Regionally, changes in extreme precipitation are even higher because of changes in the storm tracks.

Description: The regional dust model system LM-MUSCAT-DES was developed in the framework of the SAMUM project. Using the unique comprehensive data set of near-source dust properties during the 2006SAMUMfield campaign, the performance of the model system is evaluated for two time periods in May and June 2006. Dust optical thicknesses, number size distributions and the position of the maximum dust extinction in the vertical profiles agree well with the observations. However, the spatio-temporal evolution of the dust plumes is not always reproduced due to inaccuracies in the dust source placement by the model. While simulated winds and dust distributions are well matched for dust events caused by dry synoptic-scale dynamics, they are often misrepresented when dust emissions are caused by moist convection or influenced by small-scale topography that is not resolved by the model. In contrast to long-range dust transport, in the vicinity of source regions the model performance strongly depends on the correct prediction of the exact location of sources. Insufficiently resolved vertical grid spacing causes the absence of inversions in the model vertical profiles and likely explains the absence of the observed sharply defined dust layers.

Description: Screening for pathogenic micro-organisms is an essential component of translocation-based conservation management. While there are some data on pathogens in New Zealand passerines, little is known about the distribution and prevalence of pathogens infecting New Zealand Psittaciformes. We conducted a survey for pathogens of the vulnerable New Zealand endemic red-crowned parakeet Cyanoramphus novaezelandiae in two wild populations (Little Barrier Island and Raoul Island), and in a translocated population (Tiritiri Matangi Island). A total of 101 cloacal samples were tested for Salmonella and Yersinia. Of these, 82 samples were also tested for Campylobacter. None of these microorganisms were detected. Although our sampling effort was insufficient to detect a low prevalence of Campylobacter, modelling of minimum detectable prevalence of Salmonella and Yersinia indicates that these micro-organisms would have been detected if present as common or chronic conditions of red-crowned parakeets at these sites.

Description: Cephalopods play a significant role in coastal and oceanic ecosystems, both as consumers of invertebrates and small fish and as the prey of some fish, seabirds and marine mammals and other large predators. Approximately 30 species of cephalopod have been recorded in the north-eastern Atlantic and adjacent waters, including 18 teuthid (squid), seven sepiolid (bobtail), three sepiid (cuttlefish) and 10 octopod (octopus) species. A number of these are exploited commercially and support important target and by-catch fisheries in Western Europe. During the past decade, annual landings of cephalopods from the north-eastern Atlantic (International Council for the Exploration of the Sea [ICES] area) have ranged from 40,000 to 55,000 t, including substantial catches of long-fin (loliginid) squid (7000–11,000 t per annum), short-fin (ommastrephid) squid (3000–10,000 t), cuttlefish (including sepiolids; 16,000–24,000 t) and octopods (12,000–18,000 t). The most important exploited species in the north-eastern Atlantic are Eledone cirrhosa, Illex coindetii, Loligo forbesi, Loligo vulgaris, Octopus vulgaris, Todarodes sagittatus, Todaropsis eblanae and Sepia officinalis. Other species including Alloteuthis subulata, Gonatus fabricii and certain sepiolids, appear to be abundant and may be marketable. Cephalopods tend to rapidly concentrate heavy metals and other toxic substances in their tissues and this plays an important role in the bioaccumulation of these pollutants in marine predators as well as having implications for human consumption. High levels of cadmium and mercury are often recorded in cephalopod tissues. Another important environmental issue concerns the potential impact of widespread human activity on cephalopod spawning areas, particularly bottom-fishing operations but also shipping, and oil exploration and production. In contrast to many finfish species that spawn annually over a number of years, most cephalopods live only 1–2 yr and die after spawning. Therefore, failure to reproduce and recruit adequately in any given year may seriously impact the long-term viability of cephalopod stocks. Climate change is expected to have a significant effect on many species in the north-eastern Atlantic. This review provides a detailed account of the zoogeography, biology and ecology of cephalopods in the north-eastern Atlantic, on a species-by-species basis. Important economic, ecological and conservation issues affecting cephalopods in this area are also discussed

Description: A new, non-flux-corrected, global climate model is introduced, the Kiel Climate Model (KCM), which will be used to study internal climate variability from interannual to millennial time scales and climate predictability of the first and second kind. The version described here is a coarse-resolution version that will be employed in extended-range integrations of several millennia. KCM's performance in the tropical Pacific with respect to mean state, annual cycle, and El Nino-Southern Oscillation (ENSO) is described. Additionally, the tropical Pacific response to global warming is studied.Overall, climate drift in a multicentury control integration is small. However, KCM exhibits an equatorial cold bias at the surface of the order 1 degrees C, while strong warm biases of several degrees are simulated in the eastern tropical Pacific on both sides off the equator, with maxima near the coasts. The annual and semiannual cycles are realistically simulated in the eastern and western equatorial Pacific, respectively. ENSO performance compares favorably to observations with respect to both amplitude and period. An ensemble of eight greenhouse warming simulations was performed, in which the CO2 concentration was increased by 1% yr(-1) until doubling was reached, and stabilized thereafter. Warming of equatorial Pacific sea surface temperature (SST) is, to first order, zonally symmetric and leads to a sharpening of the thermocline. ENSO variability increases because of global warming: during the 30-yr period after CO2 doubling, the ensemble mean standard deviation of Nino-3 SST anomalies is increased by 26% relative to the control, and power in the ENSO band is almost doubled. The increased variability is due to both a strengthened (22%) thermocline feedback and an enhanced (52%) atmospheric sensitivity to SST; both are associated with changes in the basic state. Although variability increases in the mean, there is a large spread among ensemble members and hence a finite probability that in the "model world" no change in ENSO would be observed.

Description: The temporal evolution of the strength of the Atlantic Meridional Overturning Circulation (AMOC) in the subtropical North Atlantic is affected by both remotely forced, basin-scale meridionally coherent, climate-relevant transport anomalies, such as changes in high-latitude deep water formation rates, and locally forced transport anomalies, such as eddies or Rossby waves, possibly associated with small meridional coherence scales, which can be considered as noise. The focus of this paper is on the extent to which local eddies and Rossby waves when impinging on the western boundary of the Atlantic affect the temporal variability of the AMOC at 26.5 degrees N. Continuous estimates of the AMOC at this latitude have been made since April 2004 by combining the Florida Current, Ekman, and midocean transports with the latter obtained from continuous density measurements between the coasts of the Bahamas and Morocco, representing, respectively, the western and eastern boundaries of the Atlantic at this latitude.Within 100 km of the western boundary there is a threefold decrease in sea surface height variability toward the boundary, observed in both dynamic heights from in situ density measurements and altimetric heights. As a consequence, the basinwide zonally integrated upper midocean transport shallower than 1000 m-as observed continuously between April 2004 and October 2006-varies by only 3.0 Sv (1 Sv = 10(6) m(3) s(-1)) RMS. Instead, upper midocean transports integrated from western boundary stations 16, 40, and 500 km offshore to the eastern boundary vary by 3.6, 6.0, and 10.7 Sv RMS, respectively. The reduction in eddy energy toward the western boundary is reproduced in a nonlinear reduced-gravity model suggesting that boundary-trapped waves may account for the observed decline in variability in the coastal zone because they provide a mechanism for the fast equatorward export of transport anomalies associated with eddies impinging on the western boundary. An analytical model of linear Rossby waves suggests a simple scaling for the reduction in thermocline thickness variability toward the boundary. Physically, the reduction in amplitude is understood as along-boundary pressure gradients accelerating the fluid and rapidly propagating pressure anomalies along the boundary. The results suggest that the local eddy field does not dominate upper midocean transport or AMOC variability at 26.5 degrees N on interannual to decadal time scales.

Description: The SAMUM field campaign in southern Morocco in May/June 2006 provides valuable data to study the emission, and the horizontal and vertical transports of mineral dust in the Northern Sahara. Radiosonde and lidar observations show differential advection of air masses with different characteristics during stable nighttime conditions and up to 5-km deep vertical mixing in the strongly convective boundary layer during the day. Lagrangian and synoptic analyses of selected dust periods point to a topographic channel from western Tunisia to central Algeria as a dust source region. Significant emission events are related to cold surges from the Mediterranean in association with eastward passing upper-level waves and lee cyclogeneses south of the Atlas Mountains. Other relevant events are local emissions under a distinct cut-off low over northwestern Africa and gust fronts associated with dry thunderstorms over the Malian and Algerian Sahara. The latter are badly represented in analyses from the European Centre for Medium–Range Weather Forecasts and in a regional dust model, most likely due to problems with moist convective dynamics and a lack of observations in this region. This aspect needs further study. The meteorological source identification is consistent with estimates of optical and mineralogical properties of dust samples.

Description: Several recent general circulation model studies discuss the predictability of the Indian Ocean dipole (IOD) mode, suggesting that it is predictable because of coupled ocean-atmosphere interactions in the Indian Ocean. However, it is not clear from these studies how much of the predictability is due to the response to El Nino. It is shown in this note that a simple statistical model that treats the Indian Ocean as a red noise process forced by tropical Pacific SST shows forecast skills comparable to those of recent general circulation model studies. The results also indicate that some of the eastern tropical Indian Ocean SST predictability in recent studies may indeed be beyond the skill of the simple model proposed in this note, indicating that dynamics in the Indian Ocean may have caused this improved predictability in this region. The model further indicates that the IOD index may be the least predictable index of Indian Ocean SST variability. The model is proposed as a null hypothesis for Indian Ocean SST predictions.

Description: Barnacle cypris larvae respond to many cues when selecting a settlement site. The settlement of over a million larvae on tiles of different textures, orientations and densities of incumbent settlers was measured on the rocky intertidal at Great Cumbrae, Scotland. Half of the tiles were replaced every tide whereas the others simultaneously accumulated settlers. Factor effects varied on each tide, and converged in the accumulating deployment. Increasing incumbent density led to net loss of settlement, which was less probable on the textures on which fastest settlment occurred ('very fine'), and more probable on those on which settlement was slowest ('smooth'). More settlement occurred on down-facing orientations during daylight and vice versa. Cue ranks were non-linear, so a path analysis model quantified the relative influence of each factor. Gregariousness was the most influential cue measured, although unmeasured factors had greater effects, highlighting the complexity of settlement influences in this species.

Description: Fluorescence excitation-emission matrices showed the spectral signature of dissolved organic matter (DOM) downstream in the River Tet at all seasons corresponding to humic substances with maximum fluorescence emission em=420-460nm for excitations of ex=340-360nm and the occasional presence of tryptophan, tracer of anthropogenic pressure, spectroscopically identified by ex/em=310/350nm. A factorial discriminant analysis, performed using the parameters selected (ex/em pairs of wavelength), succeeded in a better discrimination of seasons than stations, and clearly showed the presence of two fluorophores. Fluorophore 1, with two absorption bands: ex=260-320nm and 330-390nm for em=440-500nm, and Fluorophore 2, with one absorption band: ex=300-360nm for em=410nm, which are attributed to humic acid (HA) and fulvic acid (FA), respectively. Variations of DOM relative contents downstream in the River Tet, according to seasons and stations, showed high amounts of DOM (pedogenic character) along the river in the humid period, with the highest value obtained in the mountain section. In contrast, in summer, the DOM contents were low (aquagenic character). Moreover, DOM presents a relatively constant composition with a percentage of FA ranging from 40% at the mountain station to 48% at the mouth river, whatever the season.

Description: A characteristic feature of global warming is the land-sea contrast, with stronger warming over land than over oceans. Recent studies find that this land-sea contrast also exists in equilibrium global change scenarios, and it is caused by differences in the availability of surface moisture over land and oceans. In this study it is illustrated that this land-sea contrast exists also on interannual time scales and that the ocean-land interaction is strongly asymmetric. The land surface temperature is more sensitive to the oceans than the oceans are to the land surface temperature, which is related to the processes causing the land-sea contrast in global warming scenarios. It suggests that the ocean's natural variability and change is leading to variability and change with enhanced magnitudes over the continents, causing much of the longer-time-scale (decadal) global-scale continental climate variability. Model simulations illustrate that continental warming due to anthropogenic forcing (e. g., the warming at the end of the last century or future climate change scenarios) is mostly (80%-90%) indirectly forced by the contemporaneous ocean warming, not directly by local radiative forcing.

Description: Since early 2008, an increasing number of countries have ratified an international treaty to ban the application of antifouling (AF) coatings based on organotin compounds (eg tributyltin (TBT) and triphenyltin). As a result, the demand for environmentally friendly, non-toxic or low-toxicity AF compounds and technologies (green AF agents) has become an urgent reality. Marine coatings based on Cu2O and various other biocides have a negative impact on the environment and they must eventually be replaced by new, effective, and environmentally friendly AF compounds. This mini-review describes important AF compounds discovered from a variety of organisms from 2004 until mid 2009, and discusses recent and general trends in the discovery of AF compounds. Finally, a perspective on the future of AF compound development is presented. The discussion is aimed at updating scientists and engineers on the current challenges facing AF research.

Description: The presented study assessed the heavy metal contamination risk in a former sludge deposit field of the River Ruhr in Essen, Germany. Therefore, the temporal and spatial distribution in soils and plants, chemical fractionation, mobilization potential, and transfer characteristics have been investigated. Soil samples, roots and shoots of rushes (Juncus sp.), and stem wood disks of willows (Salix sp.) were analyzed for Zn, Cu, Pb, Ni, Cr, and Cd. Plant available and mobile heavy metal portions have been determined using a sequential extraction procedure. The results show that the soils and the rushes are highly contaminated, although there is a considerable decrease compared to initial concentrations some 20 years ago. The willows show only small heavy metal enrichment. pH induced mobilization potential in soil is high for Cd, Zn and Ni. Additionally, these elements contain high portions of plant-available fractions. High transfer rates from soil to roots and very high rates from roots to shoots of rushes have been determined for Cd and Zn, indicating an accumulation of these elements in shoots of rushes. The rushes reflect the temporal and spatial heavy metal distribution in soil and might thus be used as a bioindicator or for phytoremediation.

Description: Atmospheric pressure observations from the Southern Hemisphere are used to estimate monthly and annually averaged indexes of the southern annular mode (SAM) back to 1884. This analysis groups all relevant observations in the following four regions: one for Antarctica and three in the subtropical zone. Continuous surface pressure observations are available at a number of locations in the subtropical regions since the end of the nineteenth century. However, year-round observations in the subpolar region near the Antarctic continent began only during the 1940-60 period. The shorter Antarctic records seriously compromise the length of a traditionally estimated SAM index. To improve the situation "proxy'' estimates of Antarctic sea level pressure anomalies are provided based on the concept of atmospheric mass conservation poleward of 208S. This allows deriving a longer SAM index back to 1884. Several aspects of the new record, its statistical properties, seasonal trends, and the regional pressure anomaly correlations, are presented.

Description: Statistical analysis of observations (including atmospheric reanalysis and forced ocean model simulations) is used to address two questions: First, does an analogous mechanism to that of El Niño–Southern Oscillation (ENSO) exist in the equatorial Atlantic or Indian Ocean? Second, does the intrinsic variability in these basins matter for ENSO predictability? These questions are addressed by assessing the existence and strength of the Bjerknes and delayed negative feedbacks in each tropical basin, and by fitting conceptual recharge oscillator models, both with and without interactions among the basins. In the equatorial Atlantic the Bjerknes and delayed negative feedbacks exist, although weaker than in the Pacific. Equatorial Atlantic variability is well described by the recharge oscillator model, with an oscillatory mixed ocean dynamics–sea surface temperature (SST) mode present in boreal spring and summer. The dynamics of the tropical Indian Ocean, however, appear to be quite different: no recharge–discharge mechanism is found. Although a positive Bjerknes-like feedback from July to September is found, the role of heat content seems secondary. Results also show that Indian Ocean interaction with ENSO tends to damp the ENSO oscillation and is responsible for a frequency shift to shorter periods. However, the retrospective forecast skill of the conceptual model is hardly improved by explicitly including Indian Ocean SST. The interaction between ENSO and the equatorial Atlantic variability is weaker. However, a feedback from the Atlantic on ENSO appears to exist, which slightly improves the retrospective forecast skill of the conceptual model.

Description: Draft regulations for prospecting and exploration of polymetallic sulphides in the “Area” are currently being considered for implementation by the International Seabed Authority. This paper examines possible models for allocation of lease blocks for exploration and the proposed schedule for relinquishing blocks during the exploration phase. One model for granting of exploration licenses under the proposed regulations involves contiguous lease blocks, similar to that being considered for nodules and crusts; another model involves non-contiguous blocks. An analysis of the occurrence and distribution of known polymetallic sulphides in 32 training areas shows that the regulations for prospecting and exploration of crusts likely cannot be applied equally to polymetallic sulphides.

Description: A wide variety of terrestrial biomass feed stocks have been identified as suitable candidates for fractionation and conversion into biofuels. In particular, microalgae have been promoted as a future source of transportation fuels primarily because of their stated potential to produce up to 10 times more oil per acre than traditional biofuel crops. Their ability to grow relatively fast, be harvested on a daily basis, and grown in earthen ponds or closed photobioreactors that occupy marginal or poor crop lands using salt or brackish water, are often referenced. When these attractive traits are coupled with the potential to concomitantly harvest valuable co‐products such as biopolymers, proteins, and animal feeds, one can see why microalgae are often touted as biotechnology's “green gold”. The development of large‐scale microalgae farms, however, has been slowed by limitations in downstream processing technology. For example, traditional methods to dewater, extract, and recover bio‐oil from oil‐seeds possess little utility for microalgae. The extreme requirement of dewatering poses tremendous hurdles for any technology processing biofuels from microalgae. To further complicate matters, identifying the most appropriate paths for appropriate extraction technology depends heavily on the microalgal species and its cultivation status, both of which are highly characterized for higher plants as compared to microalgae. In this review we discuss existing extraction methodologies as they have and can be applied to microalgae. Commentary is provided on their potential as a unit operation that exists within the framework of an industrial‐scale microalgal cultivation process that extends from the production of biomass in photobioreactors to the fractionation of the recovered bio‐oil.

Description: Cephalopods are increasingly acknowledged as an ecologically important group in Chilean ecosystems, but are also one of their less-known biogeographic components. Notably, this group is represented virtually exclusively by non-endemic species, although we hypothesized that their distribution over the coast should be constrained by similar physical determinants to those affecting endemic taxa. We thus present a first evaluation of the latitudinal patterns of diversity and distribution of cephalopod species in Chile, based on geographical data obtained from a review of the available literature. We constructed presence–absence binary matrices of coastal and oceanic species in 20 latitudinal units (2°), for then calculating the respective similarity matrices to obtain a distribution dendrogram using hierarchical cluster analysis (UPGM). The original binary matrices were resampled performing 1000 stochastic reassignments to calculating the 95th percentile as the criterion to identify significant clusters. Statistical comparisons between distributional groupings were performed using ANOSIM. We recorded 86 cephalopods in Chile, including oceanic (71) and coastal (15) species. Species richness showed two major breaks at 30° S and 42° S, and decreased toward higher latitudes. Cephalopod species showed well-defined endpoints of distribution within the Chilean coast, differentiating three main biogeographical units: northern (18–30° S), central (30–42° S) and southern (42–56° S) areas. Biogeographical patterns of cephalopod species in Chile showed no particular difference with those already described for most Chilean taxa. The marked distribution breaks of cephalopods at 30° and 42° S suggest that external forcing and physical factors other than temperature gradients may strongly constrain their dispersal.

Description: The Agulhas Current system has been analyzed in a nested high-resolution ocean model and compared to observations. The model shows good performance in the western boundary current structure and the transports off the South African coast. This includes the simulation of the northward-flowing Agulhas Undercurrent. It is demonstrated that fluctuations of the Agulhas Current and Undercurrent around 50–70 days are due to Natal pulses and Mozambique eddies propagating downstream. A sensitivity experiment that excludes those upstream perturbations significantly reduces the variability as well as the mean transport of the undercurrent. Although the model simulates undercurrents in the Mozambique Channel and east of Madagascar, there is no direct connection between those and the Agulhas Undercurrent. Virtual float releases demonstrate that topography is effectively blocking the flow toward the north.

Description: For the first time, an analytical theory and a very high-resolution, frontal numerical model, both based on the unsteady, nonlinear, reduced-gravity shallow water equations on a beta plane, have been used to investigate aspects of the migration of homogeneous surface, frontal warm-core eddies on a beta plane. Under the assumption that, initially, such vortices are surface circular anticyclones of paraboloidal shape and having both radial and azimuthal velocities that are linearly dependent on the radial coordinate (i.e., circular pulsons of the first order), approximate analytical expressions are found that describe the nonstationary trajectories of their centers of mass for an initial stage as well as for a mature stage of their westward migration. In particular, near-inertial oscillations are evident in the initial migration stage, whose amplitude linearly increases with time, as a result of the unbalanced vortex initial state on a beta plane. Such an initial amplification of the vortex oscillations is actually found in the first stage of the evolution of warm-core frontal eddies simulated numerically by means of a frontal numerical model initialized using the shape and velocity fields of circular pulsons of the first order. In the numerical simulations, this stage is followed by an adjusted, complex nonstationary state characterized by a noticeable asymmetry in the meridional component of the vortex's horizontal pressure gradient, which develops to compensate for the variations of the Coriolis parameter with latitude. Accordingly, the location of the simulated vortex's maximum depth is always found poleward of the location of the simulated vortex's center of mass. Moreover, during the adjusted stage, near-inertial oscillations emerge that largely deviate from the exactly inertial ones characterizing analytical circular pulsons: a superinertial and a subinertial oscillation in fact appear, and their frequency difference is found to be an increasing function of latitude. A comparison between vortex westward drifts simulated numerically at different latitudes for different vortex radii and pulsation strengths and the corresponding drifts obtained using existing formulas shows that, initially, the simulated vortex drifts correspond to the fastest predicted ones in many realistic cases. As time elapses, however, the development of a beta-adjusted vortex structure, together with the effects of numerical dissipation, tend to slow down the simulated vortex drift.

Description: Wind-induced near-inertial energy has been believed to be an important source for generating the ocean mixing required to maintain the global meridional overturning circulation. In the present study, the near-inertial energy budget in a realistic (1)/(12)degrees model of the North Atlantic Ocean driven by synoptically varying wind forcing is examined. The authors find that nearly 70% of the wind-induced near-inertial energy at the sea surface is lost to turbulent mixing within the top 200 m and, hence, is not available to generate diapycnal mixing at greater depth. Assuming this result can be extended to the global ocean, it is estimated that the wind-induced near-inertial energy available for ocean mixing at depth is, at most, 0.1 TW. This confirms a recent suggestion that the role of wind-induced near-inertial energy in sustaining the global overturning circulation might have been overemphasized.

Description: A new field of study, "decadal prediction," is emerging in climate science. Decadal prediction lies between seasonal/interannual forecasting and longer-term climate change projections, and focuses on time-evolving regional climate conditions over the next 10-30 yr. Numerous assessments of climate information user needs have identified this time scale as being important to infrastructure planners, water resource managers, and many others. It is central to the information portfolio required to adapt effectively to and through climatic changes. At least three factors influence time-evolving regional climate at the decadal time scale: 1) climate change commitment (further warming as the coupled climate system comes into adjustment with increases of greenhouse gases that have already occurred), 2) external forcing, particularly from future increases of greenhouse gases and recovery of the ozone hole, and 3) internally generated variability. Some decadal prediction skill has been demonstrated to arise from the first two of these factors, and there is evidence that initialized coupled climate models can capture mechanisms of internally generated decadal climate variations, thus increasing predictive skill globally and particularly regionally. Several methods have been proposed for initializing global coupled climate models for decadal predictions, all of which involve global time-evolving threedimensional ocean data, including temperature and salinity. An experimental framework to address decadal predictability/prediction is described in this paper and has been incorporated into the coordinated Coupled Model Intercomparison Model, phase 5 (CMIP5) experiments, some of which will be assessed for the IPCC Fifth Assessment Report (AR5). These experiments will likely guide work in this emerging field over the next 5 yr.

Description: Symptoms characteristic of wasting disease, thought to result from infection by protozoan pathogens (i.e. Labyrinthula spp.), are a common phenomenon affecting seagrass species worldwide. However relatively little is known about factors that control the survival and success of Labyrinthula in part due to the difficulty associated with quantifying the growth of this organism. Here we describe a simple and inexpensive method for measuring growth of Labyrinthula in liquid culture that takes into consideration both cell density and areal spread. The technique allows for examination of the effects of both abiotic and biotic factors on the growth of Labyrinthula apart from its seagrass host, separating the effects of environmental condition on the host from their effects on the pathogen.

Description: Sediments of upwelling regions off Namibia, Peru, and Chile contain dense populations of large nitrate-storing sulfide-oxidizing bacteria, Thiomargarita, Beggiatoa, and Thioploca. Increased contents of monounsaturated C16 and C18 fatty acids have been found at all stations studied, especially when a high density of sulfide oxidizers in the sediments was observed. The distribution of lipid biomarkers attributed to sulfate reducers (10MeC16:0 fatty acid, ai-C15:0 fatty acid, and mono-O-alkyl glycerol ethers) compared to the distribution of sulfide oxidizers indicate a close association between these bacteria. As a consequence, the distributions of sulfate reducers in sediments of Namibia, Peru, and Chile are closely related to differences in the motility of the various sulfide oxidizers at the three study sites. Depth profiles of mono-O-alkyl glycerol ethers have been found to correlate best with the occurrence of large sulfide-oxidizing bacteria. This suggests a particularly close link between mono-O-alkyl glycerol ether-synthesizing sulfate reducers and sulfide oxidizers. The interaction between sulfide-oxidizing bacteria and sulfate-reducing bacteria reveals intense sulfur cycling and degradation of organic matter in different sediment depths.

Description: Recent observations show dramatic changes of the Arctic atmosphere–ice–ocean system. Here the authors demonstrate, through the analysis of a vast collection of previously unsynthesized observational data, that over the twentieth century the central Arctic Ocean became increasingly saltier with a rate of freshwater loss of 239 ± 270 km3 decade−1. In contrast, long-term (1920–2003) freshwater content (FWC) trends over the Siberian shelf show a general freshening tendency with a rate of 29 ± 50 km3 decade−1. These FWC trends are modulated by strong multidecadal variability with sustained and widespread patterns. Associated with this variability, the FWC record shows two periods in the 1920s–30s and in recent decades when the central Arctic Ocean was saltier, and two periods in the earlier century and in the 1940s–70s when it was fresher. The current analysis of potential causes for the recent central Arctic Ocean salinification suggests that the FWC anomalies generated on Arctic shelves (including anomalies resulting from river discharge inputs) and those caused by net atmospheric precipitation were too small to trigger long-term FWC variations in the central Arctic Ocean; to the contrary, they tend to moderate the observed long-term central-basin FWC changes. Variability of the intermediate Atlantic Water did not have apparent impact on changes of the upper–Arctic Ocean water masses. The authors’ estimates suggest that ice production and sustained draining of freshwater from the Arctic Ocean in response to winds are the key contributors to the salinification of the upper Arctic Ocean over recent decades. Strength of the export of Arctic ice and water controls the supply of Arctic freshwater to subpolar basins while the intensity of the Arctic Ocean FWC anomalies is of less importance. Observational data demonstrate striking coherent long-term variations of the key Arctic climate parameters and strong coupling of long-term changes in the Arctic–North Atlantic climate system. Finally, since the high-latitude freshwater plays a crucial role in establishing and regulating global thermohaline circulation, the long-term variations of the freshwater content discussed here should be considered when assessing climate change and variability.

Description: Data from an array of six moorings deployed east of Abaco, Bahamas, along 26.5°N during March 2004–May 2005 are analyzed. These moorings formed the western boundary array of a transbasin observing system designed to continuously monitor the meridional overturning circulation and meridional heat flux in the subtropical North Atlantic, under the framework of the joint U.K.–U.S. Rapid Climate Change (RAPID)–Meridional Overturning Circulation (MOC) Program. Important features of the western boundary circulation include the southward-flowing deep western boundary current (DWBC) below 1000 m and the northward-flowing “Antilles” Current in the upper 1000 m. Transports in the western boundary layer are estimated from direct current meter observations and from dynamic height moorings that measure the spatially integrated geostrophic flow between moorings. The results of these methods are combined to estimate the time-varying transports in the upper and deep ocean over the width of the western boundary layer to a distance of 500 km offshore of the Bahamas escarpment. The net southward transport of the DWBC across this region, inclusive of northward deep recirculation, is −26.5 Sv (Sv ≡ 106 m3 s−1), which is divided nearly equally between upper (−13.9 Sv) and lower (−12.6 Sv) North Atlantic Deep Water (NADW). In the top 1000 m, 6.0 Sv flows northward in a thermocline-intensified jet near the western boundary. These transports are found to agree well with historical current meter data in the region collected between 1986 and 1997. Variability in both shallow and deep components of the circulation is large, with transports above 1000 m varying between −15 and +25 Sv and deep transports varying between −60 and +3 Sv. Much of this transport variability, associated with barotropic fluctuations, occurs on relatively short time scales of several days to a few weeks. Upon removal of the barotropic fluctuations, slower baroclinic transport variations are revealed, including a temporary stoppage of the lower NADW transport in the DWBC during November 2004.

Description: A tangent linear adjoint for a low-resolution dynamical model of the atmosphere is used to derive the optimal forcing perturbations for all state variables such that after a specified lead time the model response has a given projection, in terms of an energy norm, on the pattern associated with the 51-yr trend in the Northern Hemisphere winter tropospheric circulation, 1948/49–1998/99. A feature of the derived forcing sensitivity is a Rossby wave–like feature that emanates from the western tropical Pacific and is associated with the deepening of the Aleutian low, whereas an annular pattern in the forcing sensitivity in the uppermost model level is shown to be associated with the pattern of the trend over the Euro-Atlantic/Asian sectors, including the upward trend in the North Atlantic Oscillation index. The authors argue that the Rossby wave–type feature is consistent with studies that have argued a role for the upward trend in tropical sea surface temperature during the 51-yr period. On the other hand, the authors interpret the annular pattern in the forcing sensitivity as being consistent with studies that have argued that the trend over the Euro-Atlantic sector was associated with influences from the stratosphere. In particular, a nonlinear model driven by the optimal forcing perturbation applied only to the top model level is successful at reproducing the trend pattern with the correct amplitude in the Euro-Atlantic sector, but implies a trend over the North Pacific toward a weaker Aleutian low, contrary to what was observed but similar to the spatial pattern associated with the northern annular mode. These results show that the adjoint approach can shed light on previous apparently different interpretations of the trend. The study also presents a successful application of a tangent linear adjoint model to a climate problem.

Description: Recent observations show dramatic changes of the Arctic atmosphere–ice–ocean system. Here the authors demonstrate, through the analysis of a vast collection of previously unsynthesized observational data, that over the twentieth century the central Arctic Ocean became increasingly saltier with a rate of freshwater loss of 239 ± 270 km3 decade−1. In contrast, long-term (1920–2003) freshwater content (FWC) trends over the Siberian shelf show a general freshening tendency with a rate of 29 ± 50 km3 decade−1. These FWC trends are modulated by strong multidecadal variability with sustained and widespread patterns. Associated with this variability, the FWC record shows two periods in the 1920s–30s and in recent decades when the central Arctic Ocean was saltier, and two periods in the earlier century and in the 1940s–70s when it was fresher. The current analysis of potential causes for the recent central Arctic Ocean salinification suggests that the FWC anomalies generated on Arctic shelves (including anomalies resulting from river discharge inputs) and those caused by net atmospheric precipitation were too small to trigger long-term FWC variations in the central Arctic Ocean; to the contrary, they tend to moderate the observed long-term central-basin FWC changes. Variability of the intermediate Atlantic Water did not have apparent impact on changes of the upper–Arctic Ocean water masses. The authors’ estimates suggest that ice production and sustained draining of freshwater from the Arctic Ocean in response to winds are the key contributors to the salinification of the upper Arctic Ocean over recent decades. Strength of the export of Arctic ice and water controls the supply of Arctic freshwater to subpolar basins while the intensity of the Arctic Ocean FWC anomalies is of less importance. Observational data demonstrate striking coherent long-term variations of the key Arctic climate parameters and strong coupling of long-term changes in the Arctic–North Atlantic climate system. Finally, since the high-latitude freshwater plays a crucial role in establishing and regulating global thermohaline circulation, the long-term variations of the freshwater content discussed here should be considered when assessing climate change and variability.

Description: Greywacke, argillite, greyschist and hypabyssal igneous rocks have been obtained from an Ocean Drilling Program core on the Queensland Plateau and from xenoliths in a volcanic breccia dredged from the crest of the Lord Howe Rise. Low to intermediate detrital quartz contents, 260 – 240 Ma K – Ar ages, and only moderately radiogenic Sr and Nd isotope compositions, suggest a correlation with the New England Orogen of eastern Australia, rather than with Australia's Lachlan Orogen or other adjacent geological provinces. Our results indicate that the New England Orogen terranes continue towards New Zealand at least as far as the southern Lord Howe Rise. The projected offshore boundaries of the major east Australian orogens are now known with more confidence, and do not appear to require any major cross-orogen offsets.

Description: The properties of the body surface play a crucial role in most interactions of marine organisms. Critical ecological properties such as drag, morphology, uptake and release of radiation and organic matter are linked to the body surface of an aquatic organism. The properties and functions of this interface may be modified substantially by the presence and activities of epibiotic communities. This, in turn, may lead to substantial modulation of the interactions between the organism bearing epiphytes and its environment, with consequences for the relative fitness of the host organism (basibiont) and its interactors, and ultimately, the structure and functioning of the assemblage. Epibiosis may act as an ecological lever via these indirect effects, greatly amplifying or buffering biotic and abiotic stress.

Description: The importance of crustal fluid chemical composition in driving the marine deep subseafloor biosphere was examined in northeast Pacific ridge-flank sediments. At IODP Site U1301, sulfate from crustal fluids diffuses into overlying sediments, forming a transition zone where sulfate meets in situ-produced methane. Enhanced cell counts and metabolic activity suggest that sulfate stimulates microbial respiration, specifically anaerobic methane oxidation coupled to sulfate reduction. Cell counts and activity are also elevated in basement-near layers. Owing to the worldwide expansion of the crustal aquifer, we postulate that crustal fluids may fuel the marine deep subseafloor biosphere on a global scale.

Description: The causes and characteristics of interannual–decadal variability of the meridional overturning circulation (MOC) in the North Atlantic are investigated with a suite of basin-scale ocean models [the Family of Linked Atlantic Model Experiments (FLAME)] and global ocean–ice models (ORCA), varying in resolution from medium to eddy resolving (½°–1/12°), using various forcing configurations built on bulk formulations invoking atmospheric reanalysis products. Comparison of the model hindcasts indicates similar MOC variability characteristics on time scales up to a decade; both model architectures also simulate an upward trend in MOC strength between the early 1970s and mid-1990s. The causes of the MOC changes are examined by perturbation experiments aimed selectively at the response to individual forcing components. The solutions emphasize an inherently linear character of the midlatitude MOC variability by demonstrating that the anomalies of a (non–eddy resolving) hindcast simulation can be understood as a superposition of decadal and longer-term signals originating from thermohaline forcing variability, and a higher-frequency wind-driven variability. The thermohaline MOC signal is linked to the variability in subarctic deep-water formation, and rapidly progressing to the tropical Atlantic. However, throughout the subtropical and midlatitude North Atlantic, this signal is effectively masked by stronger MOC variability related to wind forcing and, especially north of 30°–35°N, by internally induced (eddy) fluctuations.

Description: Octopuses of the family Octopodidae adopt two major life-history strategies. The first is the production of relatively few, large eggs resulting in well-developed hatchlings that resemble the adults and rapidly adopt the benthic habit of their parents. The second strategy is production of numerous small eggs that hatch into planktonic, free-swimming hatchlings with few suckers, simple chromatophores and transparent musculature. These distinctive planktonic stages are termed paralarvae and differ from conspecific adults in their morphology, physiology, ecology and behaviour. This study aims to review available knowledge on this subject. In benthic octopuses with planktonic stages, spawning characteristics and duration of planktonic life seem to play an important role in their dispersal capacities. Duration of the hatching period of a single egg mass can range from 2 days to 11 wk, while duration of the planktonic stage can range from 3 wk to half a year, depending on the species and temperature. Thus these paralarvae possess considerable potential for dispersal. In some species, individuals reach relatively large sizes while living as part of the micronekton of oceanic, epipelagic waters. Such forms appear to delay settlement for an unknown period that is suspected to be longer than for paralarvae in more coastal, neritic waters. During the planktonic period, paralarval octopuses feed on crustaceans as their primary prey. In addition to the protein, critical to the protein-based metabolism of octopuses (and all cephalopods), the lipid and copper contents of the prey also appear important in maintaining normal growth. Littoral and oceanic fishes are their main predators and defence behaviours may involve fast swimming speeds, use of ink decoys, dive responses and camouflage. Sensory systems of planktonic stages include photo-, mechano- and chemoreceptors controlled by a highly evolved nervous system that follows the general pattern described for adult cephalopods. On settlement, a major metamorphosis occurs in morphology, physiology and behaviour. Morphological changes associated with the settlement process include positive allometric arm growth; chromatophore, iridophore and leucophore genesis; development of skin sculptural components and a horizontal pupillary response. At the same time, animals lose the Kölliker organs that cover the body surface, the ‘lateral line system’ and the oral denticles of the beaks. Strong positive phototaxis is a common response for hatchlings and some later paralarval stages but this response reduces, disappears or reverses after settlement. There are many gaps in our knowledge of the planktonic phases of benthic octopuses. Most of our understanding of octopus paralarvae comes from studies of just two species (Octopus vulgaris and Enteroctopus dofleini) and knowledge of the vast majority of benthic octopus species with planktonic stages is considered rudimentary or non-existent. Research is needed in a variety of fields, from taxonomy to ecology. Studies of feeding and nutrition are critical in order to develop the nascent aquaculture of key species and ageing studies are necessary to understand planktonic population dynamics,particularly in commercially valuable species targeted by fisheries. Current and potential anthropogenic impacts on these early life stages of octopuses, such as pollution, overfishing and global warming, are also identified.

Description: Reproductive features of the poorly known oceanic squid Octopoteuthis sicula are described and quantified to gain insight into the reproductive biology of the species. The data are based on 39 complete and partial specimens from southern African waters, collected between 1975 and 2005. The specimens ranged in mantle length from 38 mm to 290 mm and included juveniles and mature females and males. The species shows female-biased sexual size dimorphism. Ovulation is asynchronous, indicating a repeated spawning strategy. Males transfer spermatophores presumably by using their long terminal organ. Spermatangia (discharged spermatophores) were found implanted in several parts of the body in both females and males, including in the anterior dorsal and ventral rugose, semi-gelatinous mantle tissue of maturing and mature females. This modified mantle tissue was only well developed in females. The morphologies of the spermatophore and the spermatangium of O. sicula are described. The spermatophoric reaction is reconstructed, using various stages of discharge, to provide insight into the process of intradermal implantation of spermatangia of this species.

Description: To construct in situ velocity-porosity relationships for oceanic basalt, considering crack features, P- and S-wave velocity measurements on basaltic samples obtained from the eastern flank of the Juan de Fuca Ridge were carried out under confining pressures up to 40 MPa. Assuming that the changes in velocities with confining pressures are originated by micro-crack closure, we estimated micro-crack aspect ratio spectra using the Kuster-Toksöz theory. The result demonstrates that the normalised aspect ratio spectra of the different samples have similar characteristics. From the normalised aspect ratio spectrum, we then constructed theoretical velocity-porosity relationships by calculating an aspect ratio spectrum for each porosity. In addition, by considering micro-crack closure due to confining pressure, a velocity-porosity relationship as a function of confining pressure could be obtained. The theoretical relationships that take into account the aspect ratio spectra are consistent with the observed relationships for over 100 discrete samples measured at atmospheric pressure, and the commonly observed pressure dependent relationships for a wide porosity range. The agreement between the laboratory-derived data and theoretically estimated values demonstrates that the velocity-porosity relationships of the basaltic samples obtained from the eastern flank of the Juan de Fuca Ridge, and their pressure dependence, can be described by the crack features (i.e. normalised aspect ratio spectra) and crack closure.

Description: The relative impact of the subtropical North and South Pacific Oceans on the tropical Pacific climate mean state and variability is estimated using an ocean–atmosphere–sea ice coupled general circulation model. Tailored experiments are performed in which the model is forced by idealized sea surface temperature anomalies (SSTAs) in the subtropics of both hemispheres. The main results of this study suggest that subtropical South Pacific climate variations play a dominant role in tropical Pacific decadal variability and in the decadal modulation of El Niño–Southern Oscillation (ENSO). In response to a 2°C warming in the subtropical South Pacific, the equatorial Pacific SST increases by about 0.6°C, approximately 65% larger than the change in the North Pacific experiment. The subtropics affect equatorial SST mainly through atmosphere–mixed layer interactions in the South Pacific experiments; the response is mostly accomplished within a decade. The “oceanic tunnel” dominates in the North Pacific experiments; the response takes at least 100 yr to be accomplished. Similar sensitivity experiments conducted with the stand-alone atmosphere model showed that both air–sea interactions and ocean dynamics are crucial in shaping the tropical climate response. The statistics of ENSO exhibit significant changes in amplitude and frequency in response to a warming/cooling of the subtropical South Pacific: a 2°C warming (cooling) of subtropical South Pacific SST reduces (increases) the interannual standard deviation by about 30% (20%) and shortens (lengthens) the ENSO period. The simulated changes in the equatorial zonal SST gradient are the main contributor to the modulation of ENSO variability. The simulated intensification (weakening) of the annual cycle in response to an enhanced warming (cooling) in subtropical South Pacific partly explains the shifts in frequency, but may also lead to a weaker (stronger) ENSO. The subtropical North Pacific thermal forcing did not change the statistical properties of ENSO as strongly.

Description: The manner in which monthly mean sea surface temperature anomalies (SSTAs) show enhanced variance at the annual period in the extratropics (an annual peak in the variance spectrum) is illustrated by observations and model simulations. A mechanism, related to the reemergence of winter SST anomalies, is proposed to explain the annual peak in SST spectrum. The idea is supported by the analysis of a hierarchy of models, including Intergovernmental Panel on Climate Change model simulations. The results of the model experiments further suggest that the annual peak is either weak or absent if decadal SST variability is forced by local air–sea interaction. However, if ocean subsurface temperature variability forces decadal SST variability, the annual peak is much stronger. Strong annual peaks may therefore be seen as an indication of ocean-forced decadal SST variability in the extratropics.

Description: The shallow subtropical–tropical cells (STC) of the Atlantic Ocean have been studied from the output fields of a 50-yr run of the German partner of the Estimating the Circulation and Climate of the Ocean (GECCO) consortium assimilation model. Comparison of GECCO with time-mean observational estimates of density and meridional currents at 10°S and 10°N, which represent the boundaries between the tropics and subtropics in GECCO, shows good agreement in transports of major currents. The variability of the GECCO wind stress in the interior at 10°S and 10°N remains consistent with the NCEP forcing, although temporary changes can be large. On pentadal and longer time scales, an STC loop response is found between the poleward Ekman divergence and STC-layer convergence at 10°S and 10°N via the Equatorial Undercurrent (EUC) at 23°W, where the divergence leads the EUC and the convergence, suggesting a “pulling” mechanism via equatorial upwelling. The divergence is also associated with changes in the eastern equatorial upper-ocean heat content. Within the STC layer, partial compensation of the western boundary current (WBC) and the interior occurs at 10°S and 10°N. For the meridional overturning circulation (MOC) at 10°S it is found that more than one-half of the variability in the upper limb can be explained by the WBC. The explained MOC variance can be increased to 85% by including the geostrophic (Sverdrup) part of the wind-driven transports.

Description: This review about the genus Laminaria sensu lato summarizes the extensive literature that has been published since the overview of the genus given by Kain in 1979. The recent proposal to divide the genus into the two genera Laminaria and Saccharina is acknowledged, but the published data are discussed under a 'sensu lato' concept, introduced here. This includes all species which have been considered to be 'Laminaria' before the division of the genus. In detail, after an introduction the review covers recent insights into phylogeny and taxonomy, and discusses morphotypes, ecotypes, population genetics and demography. It describes growth and photosynthetic performance of sporophytes with special paragraphs on the regulation of sporogenesis, regulation by endogenous rhythms, nutrient metabolism, storage products, and salinity tolerance. The biology of microstages is discussed separately. The ecology of these kelps is described with a focus on stress defence against abiotic and biotic factors and the role of Laminaria as habitat, its trophic interactions and its competition is discussed. Finally, recent developments in aquaculture are summarized. In conclusion to each section, as a perspective and guide to future research, we draw attention to the remaining gaps in the knowledge about the genus and kelps in general.

Description: For many coastal areas of the world, a decrease in abundance and depth penetration of perennial macroalgae and seagrasses has been documented and attributed to eutrophication. A surplus of nutrients impairs perennial seaweeds in at least two ways: increased phytoplankton densities reduce the depth penetration of light and in addition filamentous seaweeds and microalgae growing epiphytically shade their perennial hosts. A reduction of depth limit and total abundance has also been observed for the brown seaweed Fucus vesiculosus at many sites in the Baltic Sea. However, in most cases the mechanistic reason for the loss of Fucus has been deduced from observations rather than from experimental evidence. Here, we present results of a two-factorial (water depth/light supply and epibionts) experiment that was run in the Kiel Fjord, western Baltic, from August to October 2005. Performance of F. vesiculosus was recorded by growth and chlorophyll measurements, PI-curves and in situ measurements of the photosynthetic activity as the relative rate of electron transport (rETR). rETR and growth decreased with water depth. Chlorophyll a concentrations increased with reduced light intensities, but this apparently could not compensate for the light deficiency. Epibionts enhanced the negative effect of reduced light conditions on growth. According to these findings we estimated the physiological depth limit of F. vesiculosus in the Kiel Fjord to lie between 4 and 6 m water depth.

Description: This article analyzes the legal status of unmanned instruments (particularly, floats and gliders) for observation purposes in the ocean environment. These new kinds of instruments are being deployed by the thousands into the oceans, not the least as part of the Argo Project of the International Oceanographic Commission. Their uncontrolled drifting has raised legal questions, especially when such instruments enter waters subject to the jurisdiction of foreign states. The authors argue that the current international legal framework is insufficient to address the pertinent issues, and that a new legal regime is needed.

Description: The deep-sea smelt Bathylagus euryops, caught in July 2004 at the Charlie-Gibbs Fracture Zone (CGFZ) of the Mid-Atlantic Ridge (North Atlantic), was studied for metazoan parasites and diet composition. A total of 86 specimens with standard lengths between 6.4 and 22.1 cm (mean 13.6 cm) were examined. The parasite fauna consisted of five species: three Digenea, one Cestoda and one Nematoda. The predominant parasites were Lecithaster sp. (Digenea) and an unidentified bothriocephalidean cestode. The only nematode, Anisakis sp., occurred with a low prevalence. Bathylagus euryops at CGFZ serves as final host for the three digeneans, and as intermediate host for the cestodes and Anisakis sp. Stomach content analysis revealed a mesozooplankton crustacean diet, while 95.3% of the stomachs contained unidentified tissue.

Description: Observed sea surface temperatures (SSTs) in the North Atlantic from 1958 through 2000, as well as data from an ocean model simulation driven with the atmospheric variability observed during the same period, are examined using multichannel singular spectrum analysis. The two leading oscillatory modes are associated with a multidecadal and a quasi-decadal period. The former is connected to a basinwide uniform SST pattern and changes in the deep North Atlantic meridional overturning circulation. The quasi-decadal mode involves a tripolar SST anomaly pattern forced by atmospheric variability with a spatial structure resembling that of the North Atlantic Oscillation (NAO). The upper ocean’s dynamical response to this NAO variability provides an instantaneous positive feedback to the SST pattern, while a delayed negative feedback is due to shallow overturning circulation anomalies.

Description: The Central Indian Ocean Basin (CIOB) is the most studied basin in the Indian Ocean because of the Indian Manganese Nodules program. During the last two and half decades (and also on going), immense efforts have been made to investigate the nodule domain so as to locate the first generation nodule mine field. Over 4 million sq.km of the sea floor in the CIOB was surveyed using different samplers and echo sounders (single and multibeam). The basic requirement to identify the mine site was the abundance of the nodules (weight in kg/m2), grade of the nodule (i.e., combined percentage of Ni + Cu + Co) and the topography of the area. Various aspects related with nodules have been inspected resulting in a number of research publications, and a model derived for the growth and location of mineable ferromanganese deposits in the CIOB. Besides the ferromanganese deposits, this paper also deals with the physiographic features (seamounts, fracture zones), sediment types and on a variety of volcanics and hydrothermal materials recovered from the CIOB. It is inferred that the volcanics constitute an important part of the basin and have influenced the growth of the ferromanganese deposits. We observe that in the CIOB the presence of seamounts, types of volcanics, episodes of volcanism and altered products vis-à-vis the distribution of ferromanganese deposits are intrinsically woven and complement one another.

Description: Based upon the molecular and isotopic composition of hydrocarbons it has been proposed that the source of CH4 in Gulf of Cadiz mud volcanoes (MV) is a mixture of deep sourced thermogenic CH4 and shallow biogenic CH4. We directly investigated this possibility by comparing porewater CH4 concentrations and their δ13Cvalues with the potential for Archaeal methanogenesis in Gulf of Cadiz mud volcano (MV) sediments (Captain Arutyunov, Bonjardim, Ginsburg and Porto) using 14C-rate measurements. The CH4 has a deep sourced thermogenic origin (δ13C ∼ −49‰) but becomes 13C-depleted in and beneath the zone of anaerobic oxidation of methane (AOM) where the rates of hydrogenotrophic methanogenesis increase. Thus we infer that a portion of AOMproduced CO2 is being recycled to CH4 by methanogens yielding further 13C-depleted CH4, which might be misinterpreted as indicative of a fully shallow biogenic origin for this gas. Production of H2 is related to compositional changes in sedimentary organic matter, or to upward flux of substrate-enriched fluids. In contrast to otherMVsin the Gulf of Cadiz, GinsburgMVfluids are enriched in SO2−4 and contain very high concentrations of acetate (2478 μM below 150 cmbsf); however, the high levels of acetate did not stimulate methanogenesis but instead were oxidized to CO2 coupled to sulphate reduction. Both anaerobic oxidation of thermogenic CH4 linked to shallow methanogenesis and fluid geochemistry control the recycling of deep-sourced carbon at Gulf of Cadiz MVs, impacting near-surface δ13C-CH4 values.

Description: Force chain buckling, leading to unjamming and shear banding, is examined quantitatively via a discrete element analysis of a two-dimensional, densely-packed, cohesionless granular assembly subject to quasistatic, boundary-driven biaxial compression. A range of properties associated with the confined buckling of force chains has been established, including: degree of buckling, buckling modes, spatial and strain evolution distributions, and relative contributions to non-affine deformation, dilatation and decrease in macroscopic shear strength and potential energy. Consecutive cycles of unjamming–jamming events, akin to slip–stick events arising in other granular systems, characterize the strain-softening regime and the shear band evolution. Peaks in the dissipation rate, kinetic energy and local non-affine strain are strongly correlated: the largest peaks coincide with each unjamming event that is evident in the concurrent drops in the macroscopic shear stress and potential energy. Unjamming nucleates from the buckling of a few force chains within a small region inside the band. A specific mode of force chain buckling, prevalent in and confined to the shear band, leads to above-average levels of local non-affine strain and release of potential energy during unjamming. Ongoing studies of this and other buckling modes from a structural stability standpoint serve as the basis for the formulation of internal variables and associated evolution laws, central to the development of thermomicromechanical constitutive theory for granular materials.

Description: A simple unified critical state constitutive model for bonded geomaterials is presented in this paper. The model, which is called CASM-n, is an enhancement of an existing unified critical state model for reconstituted geomaterials (CASM). Characteristic behaviours of a bonded geomaterial such as the pre-yield higher strength and stiffness and the cohesive–frictional shearing mode in the post-yield region are taken into account and included in the reference model. The salient feature of the proposed model is the incorporation of cohesive component into the stress–dilatancy relationship. Consideration of the contribution of cohesion to plastic flow allows the modelling of delayed dilatancy and softening–contraction behaviour, which are two interesting phenomena observed in bonded geomaterials.

Description: Shortly after the advent of the first imaging passive microwave sensor on board a research satellite an anomalous climate feature was observed within the Weddell Sea. During the years 1974–1976, a 250 × 103 km2 area within the seasonal sea ice cover was virtually free of winter sea ice. This feature, the Weddell Polynya, was created as sea ice formation was inhibited by ocean convection that injected relatively warm deep water into the surface layer. Though smaller, less persistent polynyas associated with topographically induced upwelling at Maud Rise frequently form in the area, there has not been a reoccurrence of the Weddell Polynya since 1976. Archived observations of the surface layer salinity within the Weddell gyre suggest that the Weddell Polynya may have been induced by a prolonged period of negative Southern Annular Mode (SAM). During negative SAM the Weddell Sea experiences colder and drier atmospheric conditions, making for a saltier surface layer with reduced pycnocline stability. This condition enables Maud Rise upwelling to trigger sustained deep-reaching convection associated with the polynya. Since the late 1970s SAM has been close to neutral or in a positive state, resulting in warmer, wetter conditions over the Weddell Sea, forestalling repeat of the Weddell Polynya. A contributing factor to the Weddell Polynya initiation may have been a La Niña condition, which is associated with increased winter sea ice formation in the polynya area. If the surface layer is made sufficiently salty due to a prolonged negative SAM period, perhaps aided by La Niña, then Maud Rise upwelling meets with positive feedback, triggering convection, and a winter persistent Weddell Polynya.

Description: A generalization of the transformed Eulerian and temporal residual means is presented. The new formulation uses rotational fluxes of buoyancy, and the full hierarchy of statistical density moments, to reduce the cross-isopycnal eddy flux to the physically relevant component associated with the averaged water mass properties. The resulting eddy-induced diapycnal diffusivity vanishes for adiabatic, statistically steady flow, and is related to either the growth or decay of mesoscale density variance and/or the covariance between small-scale forcing (mixing) and density fluctuations, such as that associated with the irreversible removal of density variance by dissipation. The relationship between the new formulation and previous approaches is described and is illustrated using results from an eddying channel model. The formalism is quite general and applies to all kinds of averaging and to any tracer (not just density).

Description: Using the same approach as in Part I, here it is shown how sampling problems in voluntary observing ship (VOS) data affect conclusions about interannual variations and secular changes of surface heat fluxes. The largest uncertainties in linear trend estimates are found in relatively poorly sampled regions like the high-latitude North Atlantic and North Pacific as well as the Southern Ocean, where trends can locally show opposite signs when computed from the regularly sampled and undersampled data. Spatial patterns of shorter-period interannual variability, quantified through the EOF analysis, also show remarkable differences between the regularly sampled and undersampled flux datasets in the Labrador Sea and northwest Pacific. In particular, it is shown that in the Labrador Sea region, in contrast to regularly sampled NCEP–NCAR reanalysis fluxes, VOS-like sampled NCEP–NCAR reanalysis fluxes neither show significant interannual variability nor significant trends. These regions, although quite localized covering small parts of the globe, play a crucial role for the coupled atmosphere–ocean system. In the Labrador Sea, for instance, interannual and decadal-scale changes of the surface net heat fluxes are known to affect oceanic convection and, thus, the meridional overturning circulation of the Atlantic Ocean. From a discussion of current atmospheric data assimilation systems it is argued that in poorly sampled regions reanalysis products are superior to VOS-based products for studying interannual and interdecadal variations of atmosphere–ocean interaction. In well-sampled regions, on the other hand, conclusions about surface heat flux variations are relatively insensitive to the choice of the flux products used (VOS versus reanalysis data). The results are confirmed for two different datasets, that is, ECMWF 40-yr Re-Analysis (ERA-40) data and seasonal integrations with a recent version of the ECMWF model in which no actual data were assimilated.

Description: On 19 October 2000, Hurricane Michael merged with an approaching baroclinic trough over the western North Atlantic Ocean south of Nova Scotia. As the hurricane moved over cooler sea surface temperatures (SSTs; less than 25°C), it intensified to category-2 intensity on the Saffir–Simpson hurricane scale [maximum sustained wind speeds of 44 m s−1 (85 kt)] while tapping energy from the baroclinic environment. The large “hybrid” storm made landfall on the south coast of Newfoundland with maximum sustained winds of 39 m s−1 (75 kt) causing moderate damage to coastal communities east of landfall. Hurricane Michael presented significant challenges to weather forecasters. The fundamental issue was determining which of two cyclones (a newly formed baroclinic low south of Nova Scotia or the hurricane) would become the dominant circulation center during the early stages of the extratropical transition (ET) process. Second, it was difficult to predict the intensity of the storm at landfall owing to competing factors: 1) decreasing SSTs conducive to weakening and 2) the approaching negatively tilted upper-level trough, favoring intensification. Numerical hindcast simulations using the limited-area Mesoscale Compressible Community model with synthetic vortex insertion (cyclone bogus) prior to the ET of Hurricane Michael led to a more realistic evolution of wind and pressure compared to running the model without vortex insertion. Specifically, the mesoscale model correctly simulates the hurricane as the dominant circulation center early in the transition process, versus the baroclinic low to its north, which was the favored development in the runs not employing vortex insertion. A suite of experiments is conducted to establish the sensitivity of the ET to various initial conditions, lateral driving fields, domain sizes, and model parameters. The resulting storm tracks and intensities fall within the range of the operational guidance, lending support to the possibility of improving numerical forecasts using synthetic vortex insertion prior to ET in such a model.

Description: Tropical cyclones (TC) under different climate conditions in the Northern Hemisphere have been investigated with the Max Planck Institute (MPI) coupled (ECHAM5/MPI-OM) and atmosphere (ECHAM5) climate models. The intensity and size of the TC depend crucially on resolution with higher wind speed and smaller scales at the higher resolutions. The typical size of the TC is reduced by a factor of 2.3 from T63 to T319 using the distance of the maximum wind speed from the centre of the storm as a measure. The full three-dimensional structure of the storms becomes increasingly more realistic as the resolution is increased. For the T63 resolution, three ensemble runs are explored for the period 1860 until 2100 using the IPCC SRES scenario A1B and evaluated for three 30 yr periods at the end of the 19th, 20th and 21st century, respectively. While there is no significant change between the 19th and the 20th century, there is a considerable reduction in the number of the TC by some 20% in the 21st century, but no change in the number of the more intense storms. Reduction in the number of storms occurs in all regions. A single additional experiment at T213 resolution was run for the two latter 30-yr periods. The T213 is an atmospheric only experiment using the transient sea surface temperatures (SST) of the T63 resolution experiment. Also in this case, there is a reduction by some 10% in the number of simulated TC in the 21st century compared to the 20th century but a marked increase in the number of intense storms. The number of storms with maximum wind speeds greater than 50 m s−1 increases by a third. Most of the intensification takes place in the Eastern Pacific and in the Atlantic where also the number of storms more or less stays the same. We identify two competing processes effecting TC in a warmer climate. First, the increase in the static stability and the reduced vertical circulation is suggested to contribute to the reduction in the number of storms. Second, the increase in temperature and water vapour provide more energy for the storms so that when favourable conditions occur, the higher SST and higher specific humidity will contribute to more intense storms. As the maximum intensity depends crucially on resolution, this will require higher resolution to have its full effect. The distribution of storms between different regions does not, at first approximation, depend on the temperature itself but on the distribution of the SST anomalies and their influence on the atmospheric circulation. Two additional transient experiments at T319 resolution where run for 20 yr at the end of the 20th and 21st century, respectively, using the same conditions as in the T213 experiments. The results are consistent with the T213 study. The total number of TC were similar to the T213 experiment but were generally more intense. The change from the 20th to the 21st century was also similar with fewer TC in total but with more intense cyclones.

Description: In this paper, a version of the European Centre for Medium-Range Weather Forecasts (ECMWF) operational model is used to (i) diagnose the diabatic heating associated with the winter North Atlantic Oscillation (NAO) and (ii) assess the role of this heating in the dynamics of the NAO in the model. Over the North Atlantic sector, the NAO-related diabatic heating is dominated above the planetary boundary layer by the latent heat release associated with precipitation, and within the boundary layer by vertical diffusion associated with sensible heat flux from the ocean. An association between La Niña–El Niño–type conditions in the tropical Pacific and the positive/negative NAO is found in model runs using initial conditions and sea surface temperature (SST) lower boundary conditions from the period 1982–2001, but not in a companion set of model runs for the period 1962–81. Model experiments are then described in which the NAO-related diabatic heating diagnosed from the 1982–2001 control run is applied as a constant forcing in the model temperature equation using both 1982–2001 and 1962–81 model setups. To assess the local feedback from the diabatic heating, the specified forcing is first restricted to the North Atlantic sector alone. In this case, the model response (in an ensemble mean sense) is suggestive of a weak negative feedback, but exhibits more baroclinic structure and has its centers of action shifted compared to those of the NAO. On the other hand, forcing with only the tropical Pacific part of the diabatic heating leads to a robust model response in both the 1982–2001 and 1962–81 model setups. The model response projects on to the NAO with the same sign as that used to diagnose the forcing, arguing that the link between the tropical Pacific and the NAO is real in the 1982–2001 control run. The missing link in the corresponding run for 1962–81 is a result of a change in the tropical forcing between the two periods, and not the extratropical flow regime.

Description: The depth of winter convection in the central Labrador Sea is strongly influenced by the prevailing stratification in late summer. For this late summer stratification salinity is as important as temperature, and in the upper water layers salinity even dominates. To analyze the source of the spring and summer freshening in the central region, seasonal freshwater cycles have been constructed for the interior Labrador Sea, the West Greenland Current, and the Labrador Current. It is shown that none of the local freshwater sources is responsible for the spring–summer freshening in the interior, which appears to occur in two separate events in April to May and July to September. Comparing the timing and volume estimates of the seasonal freshwater cycles of the boundary currents with the central Labrador Sea helps in understanding the origin of the interior freshwater signals. The first smaller pulse cannot be attributed clearly to either of the boundary currents. The second one is about three times stronger and supplies 60% of the seasonal summer freshwater. Transport estimates and calculated mixing properties provide evidence that its source is the West Greenland Current. The finding implies a connection also on interannual time scales between Labrador Sea surface salinity and freshwater sources in the West Greenland Current and farther upstream in the East Greenland Current. The freshwater input from the West Greenland Current thus also is the likely pathway for the known modulation of Labrador Sea Water mass formation by freshwater export from the Arctic (via the East Greenland Current), which implies some predictability on longer time scales.

Description: Multichannel singular spectrum analysis (MSSA) of surface zonal wind, sea surface temperature (SST), 20° isotherm depth, and surface zonal current observations (between 1990 and 2004) identifies three coupled ocean–atmosphere modes of variability in the tropical Pacific: the El Niño–Southern Oscillation (ENSO), the annual cycle, and a mode with a 14–18-month period, which is referred to as sub-ENSO in this study. The sub-ENSO mode accounts for the near 18-month (near annual) variability prior to (following) the 1997/98 El Niño event. It was strongest during this El Niño event, with SST anomalies exceeding 1°C. Sub-ENSO peak SST anomalies are ENSO-like in structure and are associated with eastward propagating heat content variations. However, the SST anomalies are preceded by and in near quadrature with relatively strong remotely forced westward propagating zonal current variations, suggesting the sub-ENSO mode arises from the zonal-advective feedback. The sub-ENSO mode is found to exist also in an intermediate complexity model (ICM) of the tropical Pacific. A heat budget analysis of the model’s sub-ENSO mode shows it indeed arises from the zonal-advective feedback. In the model, both ENSO and sub-ENSO modes coexist, but there is a weak nonlinear interaction between them. Experiments also show that the observed changes in sub-ENSO’s characteristics may be explained by changes in the relative importance of zonal and vertical advection SST tendencies.

Description: A coordinated set of global coupled climate model [atmosphere–ocean general circulation model (AOGCM)] experiments for twentieth- and twenty-first-century climate, as well as several climate change commitment and other experiments, was run by 16 modeling groups from 11 countries with 23 models for assessment in the Intergovernmental Panel on Climate Change (IPCC) Fourth Assessment Report (AR4). Since the assessment was completed, output from another model has been added to the dataset, so the participation is now 17 groups from 12 countries with 24 models. This effort, as well as the subsequent analysis phase, was organized by the World Climate Research Programme (WCRP) Climate Variability and Predictability (CLIVAR) Working Group on Coupled Models (WGCM) Climate Simulation Panel, and constitutes the third phase of the Coupled Model Intercomparison Project (CMIP3). The dataset is called the WCRP CMIP3 multimodel dataset, and represents the largest and most comprehensive international global coupled climate model experiment and multimodel analysis effort ever attempted. As of March 2007, the Program for Climate Model Diagnostics and Intercomparison (PCMDI) has collected, archived, and served roughly 32 TB of model data. With oversight from the panel, the multimodel data were made openly available from PCMDI for analysis and academic applications. Over 171 TB of data had been downloaded among the more than 1000 registered users to date. Over 200 journal articles, based in part on the dataset, have been published so far. Though initially aimed at the IPCC AR4, this unique and valuable resource will continue to be maintained for at least the next several years. Never before has such an extensive set of climate model simulations been made available to the international climate science community for study. The ready access to the multimodel dataset opens up these types of model analyses to researchers, including students, who previously could not obtain state-of-the-art climate model output, and thus represents a new era in climate change research. As a direct consequence, these ongoing studies are increasing the body of knowledge regarding our understanding of how the climate system currently works, and how it may change in the future.

Description: Sampling uncertainties in the voluntary observing ship (VOS)-based global ocean–atmosphere flux fields were estimated using the NCEP–NCAR reanalysis and ECMWF 40-yr Re-Analysis (ERA-40) as well as seasonal forecasts without data assimilation. Air–sea fluxes were computed from 6-hourly reanalyzed individual variables using state-of-the-art bulk formulas. Individual variables and computed fluxes were subsampled to simulate VOS-like sampling density. Random simulation of the number of VOS observations and simulation of the number of observations with contemporaneous sampling allowed for estimation of random and total sampling uncertainties respectively. Although reanalyses are dependent on VOS, constituting an important part of data assimilation input, it is assumed that the reanalysis fields adequately reproduce synoptic variability at the sea surface. Sampling errors were quantified by comparison of the regularly sampled (i.e., 6 hourly) and subsampled monthly fields of surface variables and fluxes. In poorly sampled regions random sampling errors amount to 2.5°–3°C for air temperature, 3 m s−1 for the wind speed, 2–2.5 g kg−1 for specific humidity, and 15%–20% of the total cloud cover. The highest random sampling errors in surface fluxes were found for the sensible and latent heat flux and range from 30 to 80 W m−2. Total sampling errors in poorly sampled areas may be higher than random ones by 60%. In poorly sampled subpolar latitudes of the Northern Hemisphere and throughout much of the Southern Ocean the total sampling uncertainty in the net heat flux can amount to 80–100 W m−2. The highest values of the uncertainties associated with the interpolation/extrapolation into unsampled grid boxes are found in subpolar latitudes of both hemispheres for the turbulent fluxes, where they can be comparable with the sampling errors. Simple dependencies of the sampling errors on the number of samples and the magnitude of synoptic variability were derived. Sampling errors estimated from different reanalyses and from seasonal forecasts yield qualitatively comparable spatial patterns, in which the actual values of uncertainties are controlled by the magnitudes of synoptic variability. Finally, estimates of sampling uncertainties are compared with the other errors in air–sea fluxes and the reliability of the estimates obtained is discussed.

Description: Output from an eddy-resolving model of the North Atlantic Ocean is used to estimate values for the thickness diffusivity κ appropriate to the Gent and McWilliams parameterization. The effect of different choices of rotational eddy fluxes on the estimated κ is discussed. Using the raw fluxes (no rotational flux removed), large negative values (exceeding −5000 m2 s−1) of κ are diagnosed locally, particularly in the Gulf Stream region and in the equatorial Atlantic. Removing a rotational flux based either on the suggestion of Marshall and Shutts or the more general theory of Medvedev and Greatbatch leads to a reduction of the negative values, but they are still present. The regions where κ 〈 0 correspond to regions where eddies are acting to increase, rather than decrease (as in baroclinic instability) the mean available potential energy. In the subtropical gyre, κ ranges between 500 and 2000 m2 s−1, rapidly decreasing to zero below the thermocline in all cases. Rotational fluxes and κ are also estimated using an optimization technique. In this case, |κ| can be reduced or increased by construction, but the regions where κ 〈 0 are still present and the optimized rotational fluxes also remain similar to a priori values given by the theoretical considerations. A previously neglected component (ν) of the bolus velocity is associated with the horizontal flux of buoyancy along, rather than across, the mean buoyancy contours. The ν component of the bolus velocity is interpreted as a streamfunction for eddy-induced advection, rather than diffusion, of mean isopycnal layer thickness, showing up when the lateral eddy fluxes cannot be described by isotropic diffusion only. All estimates show a similar large-scale pattern for ν, implying westward advection of isopycnal thickness over much of the subtropical gyre. Comparing ν with a mean streamfunction shows that it is about 10% of the mean in midlatitudes and even larger than the mean in the Tropics.

Description: The measurements of dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) in seawater are key in global change and coastal eutrophication studies. Nowadays, the high-temperature combustion (HTC) technique is a widely used method for DOC and TDN analysis. However, uncertainties exist about the operation of the catalyst in the conversion process of DOC and TDN in the HTC method. In this study, five different 'catalyst' materials were tested for their blanks, calibration slopes, and conversion efficiency of DOC and TDN using the Shimadzu TOC 5000A total organic carbon analyser coupled to a Sievers NCD 255 nitrogen chemiluminescence detector. The materials included four metallic catalysts (Shimadzu and Johnson 0.5 Pt-alumina, 13 Cu(II)O-alumina, 0.5 Pd-alumina) and quartz beads. The results indicated that DOC blank signals for the HTC approach using metallic catalysts with an alumina support are higher compared with quartz beads, as a result of the amphoteric nature of the alumina. However, the slopes of the standard calibration graphs were lowest for DOC and TDN determinations on the quartz beads. The DOC recoveries for the metallic catalysts were close to 100 for all compounds tested, with the exception of ammonium pyrrolidine dithiocarbamate. Using quartz beads, poor recoveries were obtained for a range of organic compounds, including the commonly used calibration compounds potassium hydrogen phthalate and glycine. The TDN recoveries for all compounds were typically >90, with the exception of NaNO2. Furthermore, analysis using the CuO-alumina and Pd-alumina catalysts and quartz beads showed low recoveries for NH4Cl. This study showed that catalyst performance should be verified on a regular basis using model compounds and blank checks made during every run, and that the Shimadzu 0.5 Pt-alumina material was an efficient catalyst for DOC and TDN analyses using the coupled total organic carbon-nitrogen chemiluminescence detector (TOC-NCD) analyser. © 2007 Taylor & Francis.

Description: Data from two cross-shelf sediment sampling cruises were used to explain reasons for the sediment biogeochemical variability in respect of carbon, nitrogen and sulphur, and how the cycling of these elements governs the biogeochemistry of the overlying water through their control of the redox conditions. The spatial extent of this benthic–pelagic flux link is limited to the innershelf mud belt system on the Namibian shelf. The inshore mud belt is the primary deposition area of the carbon and nitrogen new production export flux. The offshore organic-rich zones are thought to be relict particulate organic matter originating from the inshore mud belt rather than from an overlying pelagic source. These data were used to set up a multi-layer sediment model that was used through sensitivity analyses to elucidate the input characteristics that result in the most significant feedbacks on hypoxia in the overlying water. The analyses showed that, although the new production flux is a requirement to drive an oxygen demand in the sediments, the onset and persistence of anoxia may depend critically on a low-oxygen boundary condition threshold. This is thought to be a key differentiating factor between systems that, despite comparable carbon export fluxes, are characterised by a persistent hypoxia/anoxia signal and those that are characterised by episodic hypoxia events. It was concluded that sediment oxygen demand and methane and 'sulphide' emissions from the central Benguela sediments are responses to external hypoxia boundary conditions rather than the local drivers of oxygen variability.

Description: The functional response of Sepia officinalis early stages, preying on mysids of the species Mesopodopsis slabberi was investigated. The effects of five prey densities (12.5, 25, 37.5, 50 and 125 mysids l−1) and two hatchling ages (1-day-old and 7-day-old) on consumption rate and the frequency of non-feeding animals were tested. Older animals were approximately 50% heavier than newly hatched ones. Hatchlings were individually assayed under 0.25 W m−2 natural light, 37.8 psu in salinity and 19°C. The effect of prey density on consumption rate was highly significant and no effect of age was detected within the age range tested. Maximal values recorded for consumption rate were about 0.45 mysids h−1. The frequency of non-feeding individuals was strongly reduced at saturating prey densities. The functional response curve showed an interval of prey densities for which density-dependent prey mortality is probable.

Description: We report data on the stomach contents of the long‐finned pilot whale, Globicephala melas, recovered from a group of whales stranded on Ruakaka Beach, northeastern New Zealand, in November 2006. In nine whales for which identifiable stomach contents were recovered (three that stranded on 10 November and six that stranded on 11 November) prey remains comprised exclusively cephalopod beaks attributed to five squid species. The stomachs of a further two whales contained unidentifiable upper beaks only, while the stomachs of five whales were completely empty. No whale appeared to have been satiated immediately before stranding, given that the maximum biomass of prey recently consumed by any one whale was calculated to be 〈5 kg. All squids ingested represented oceanic species, found from 50 to 1000 m but more common towards the deeper end of this range. These data both complement and contrast with the only other dietary information available for this species in New Zealand waters, reported from stomach contents of whales stranded on Farewell Spit, South Island in December 2005.

Description: Stomach contents of the long‐finned pilot whale, Globicephala melas, are reported for the first time from New Zealand waters. Analyses based on two male and three female whales (2.5–5.3 m in length) that stranded on Farewell Spit, Golden Bay, South Island in December 2005 revealed a diet comprised exclusively of cephalopods (2-33 lower cephalopod beaks per stomach). Two genera of cephalopod from two orders; arrow squid, Nototodarus spp. (Teuthoidea: Ommastrephidae), and common octopus, Pinnoctopus cordiformis (Octopoda: Octopodidae) were represented. A further five pilot whale stomachs were examined and found to be empty.

Description: Combined simultaneous satellite observations are used to evaluate the performance of parameterizations of the microphysical and optical properties of cirrus clouds used for radiative flux computations in climate models. Atmospheric and cirrus properties retrieved from Television and Infrared Observation Satellite (TIROS-N) Operational Vertical Sounder (TOVS) observations are given as input to the radiative transfer model developed for the Met Office climate model to simulate radiative fluxes at the top of the atmosphere (TOA). Simulated cirrus shortwave (SW) albedos are then compared to those retrieved from collocated Scanner for Radiation Budget (ScaRaB) observations. For the retrieval, special care has been given to angular direction models. Three parameterizations of cirrus ice crystal optical properties are represented in the Met Office radiative transfer model. These parameterizations are based on different physical approximations and different hypotheses on crystal habit. One parameterization assumes pristine ice crystals and two ice crystal aggregates. By relating the cirrus ice water path (IWP) retrieved from the effective infrared emissivity to the cirrus SW albedo, differences between the parameterizations are amplified. This study shows that pristine crystals seem to be plausible only for cirrus with IWP less than 30 g m−2. For larger IWP, ice crystal aggregates lead to cirrus SW albedos in better agreement with the observations. The data also indicate that climate models should allow the cirrus effective ice crystal diameter (De) to increase with IWP, especially in the range up to 30 g m−2. For cirrus with IWP less than 20 g m−2, this would lead to SW albedos that are about 0.02 higher than the ones of a constant De of 55 μm.

Description: A model of the subpolar North Atlantic Ocean is used to study different aspects of ventilation and water mass transformation during a year with moderate convection intensity in the Labrador Sea. The model realistically describes the salient features of the observed hydrographic structure and current system, including boundary currents and recirculations. Ventilation and transformation rates are defined and compared. The transformation rate of Labrador Sea Water (LSW), defined in analogy to several observational studies, is 6.3 Sv (Sv ≡ 106 m3 s−1) in the model. Using an idealized ventilation tracer, mimicking analyses based on chlorofluorocarbon inventories, an LSW ventilation rate of 10 Sv is found. Differences between both rates are particularly significant for those water masses that are partially transformed into denser water masses during winter. The main export route of the ventilated LSW is the deep Labrador Current (LC). Backward calculation of particle trajectories demonstrates that about one-half of the LSW leaving the Labrador Sea within the deep LC originates in the mixed layer during that same year. Near the offshore flank of the deep LC at about 55°W, the transformation of LSW begins in January and is at a maximum in February/March. While the export of transformed LSW out of the central Labrador Sea continues for several months, LSW generated near the boundary current is exported more rapidly, with maximum transport rates during March/April within the deep LC.

Description: Climate models predict a gradual weakening of the North Atlantic meridional overturning circulation (MOC) during the twenty-first century due to increasing levels of greenhouse gas concentrations in the atmosphere. Using an ensemble of 16 different coupled climate models performed for the Fourth Assessment Report (AR4) of the Intergovernmental Panel on Climate Change (IPCC), the evolution of the MOC during the twentieth and twenty-first centuries is analyzed by combining model simulations for the IPCC scenarios Twentieth-Century Climate in Coupled Models (20C3M) and Special Report on Emission Scenarios, A1B (SRESA1B). Earlier findings are confirmed that even for the same forcing scenario the model response is spread over a large range. However, no model predicts abrupt changes or a total collapse of the MOC. To reduce the uncertainty of the projections, different weighting procedures are applied to obtain “best estimates” of the future MOC evolution, considering the skill of each model to represent present day hydrographic fields of temperature, salinity, and pycnocline depth as well as observation-based mass transport estimates. Using different methods of weighting the various models together, all produce estimates that the MOC will weaken by 25%–30% from present day values by the year 2100; however, absolute values of the MOC and the degree of reduction differ among the weighting methods.

Description: An observational-based analysis of coupled variability in the equatorial Atlantic and its seasonality is presented. Regression analysis shows that the three elements of the Bjerknes positive feedback exist in the Atlantic and are spatially similar to those of the Pacific. The cross-correlation functions of the elements of the Bjerknes feedback are also similar and consistent with an ocean–atmosphere coupled mode. However, the growth rate in the Atlantic is up to 50% weaker, and explained variance is significantly lower. The Bjerknes feedback in the Atlantic is strong in boreal spring and summer, and weak in other seasons, which explains why the largest sea surface temperature anomalies (SSTAs) occur in boreal summer. Its seasonality is determined by seasonal variations in both atmospheric sensitivity to SSTA and SSTA sensitivity to subsurface temperature anomalies.

Description: This study investigates the influence of El Niño on the upper-ocean circulation in the tropical Atlantic Ocean (via changes in the Atlantic trade winds) by analyzing observed sea surface temperature (SST) together with an ocean general circulation model integration forced by the NCEP–NCAR reanalysis. During periods with anomalously warm (cold) eastern equatorial Pacific SST, the southern Atlantic tropical cell is strengthened (weakened). The difference of the cell strength between El Niño and La Niña years is about 20% of the mean cell strength. However, the variability of the cell is not dominated by the remote forcing from the eastern equatorial Pacific but seems to be caused by intrinsic tropical Atlantic variability. A strengthening (weakening) for periods with anomalously warm (cold) eastern equatorial Pacific SST is also found for the zonal surface and subsurface currents. TOPEX/Poseidon altimetry data are used to validate the results based on the OGCM integration.

Description: The circulation of the northeastern Atlantic Ocean at intermediate depths is characterized by watermass transformation processes that involve Iceland–Scotland Overflow Water (ISOW) from the northeast, Labrador Sea Water (LSW) from the west, and Mediterranean Water from the south. Field observations were carried out with 89 eddy-resolving floats (RAFOS and MARVOR types). The data coverage achieved is remarkably high and enables a comprehensive study of the eastern basins between Iceland and the Azores. The trajectories show typical pathways of the water masses involved and the role that the complex bottom topography plays in defining them. The ISOW paths tend to lean against the slopes of the Reykjanes Ridge and Rockall Plateau. Westward escapes through multiple gaps in the ridge are possible, superimposed on a sustained southward flow in the eastern basin along the Mid-Atlantic Ridge. LSW pathways leading to the eastern basins are subject to high variability in flow direction and eddy activity. In addition to a selection of characteristic trajectories, maps of the horizontal distributions of Lagrangian eddy kinetic energy and integral time scales are presented. These reveal distinct areas of intensified mixing in the Iceland Basin, as well as the sharp contrast between the subpolar and subtropical dynamics. A self-contained eddy detection scheme is applied to obtain statistics on individual eddy properties and their abundance. It is suggested that much of the intensified mixing can be related to cyclonic activity, particularly in the subpolar region.

Description: A variety of methods were successfully applied to examine the efficacy of a modular ballast water system according to the standards as adopted by the International Maritime Organization. The ballast water treatment system had a capacity of 530 m3 h−1 consisted of a pump system, a hydrocyclone, a 50 μm mesh-size self-cleaning filter and an installation for the addition of a chemical disinfectant (PERACLEAN® Ocean). The land-based testing facility used natural sea water of high turbidity during the spring phytoplankton bloom. The mesozooplankton fraction was inspected with a standard binocular. Larger zooplankton were effectively removed with the filter; the smaller sized fraction containing larvae and nauplia were killed after chemical treatment. The phytoplankton component was monitored using flow cytometry. The huge colonies of the phytoplankton Phaeocystis globosa were disrupted in the hydrocyclone liberating the colony cells which passed as single cells through the filter. These cells remained viable but were finally killed in the secondary (chemical) step. Bacteria also passed all mechanical treatment steps unharmed but were killed in the final step. Viability tests with SYTOX Green, which were specifically designed for phytoplankton, showed that mechanical treatment did not affect the percentage of viable cells a short-term, but after several hours the viable cell counts dropped down to 70%. Phytoplankton cells recovered within a single day and formed a new dense bloom rapidly. The bacteriostatic component of the chemical disinfectant (H2O2) remained present for several days preventing regrowth of bacteria for up to 15 days after addition. In conclusion, the IMO standards were met using the modular ballast water treatment unit and the applied instruments and assays were effective and rapid tools to qualify and quantify the organisms present as well as their viability.

Description: Chlorofluorocarbon (component CFC-11) and hydrographic data from 1997, 1999, and 2001 are presented to track the large-scale spreading of the Upper Labrador Sea Water (ULSW) in the subpolar gyre of the North Atlantic Ocean. ULSW is CFC rich and comparatively low in salinity. It is located on top of the denser “classical” Labrador Sea Water (LSW), defined in the density range σΘ = 27.68–27.74 kg m−3. It follows spreading pathways similar to LSW and has entered the eastern North Atlantic. Despite data gaps, the CFC-11 inventories of ULSW in the subpolar North Atlantic (40°–65°N) could be estimated within 11%. The inventory increased from 6.0 ± 0.6 million moles in 1997 to 8.1 ± 0.6 million moles in 1999 and to 9.5 ± 0.6 million moles in 2001. CFC-11 inventory estimates were used to determine ULSW formation rates for different periods. For 1970–97, the mean formation rate resulted in 3.2–3.3 Sv (Sv ≡ 106 m3 s−1). To obtain this estimate, 5.0 million moles of CFC-11 located in 1997 in the ULSW in the subtropical/tropical Atlantic were added to the inventory of the subpolar North Atlantic. An estimate of the mean combined ULSW/LSW formation rate for the same period gave 7.6–8.9 Sv. For the years 1998–99, the ULSW formation rate solely based on the subpolar North Atlantic CFC-11 inventories yielded 6.9–9.2 Sv. At this time, the lack of classical LSW formation was almost compensated for by the strongly pronounced ULSW formation. Indications are presented that the convection area needed in 1998–99 to form this amount of ULSW exceeded the available area in the Labrador Sea. The Irminger Sea might be considered as an additional region favoring ULSW formation. In 2000–01, ULSW formation weakened to 3.3–4.7 Sv. Time series of layer thickness based on historical data indicate that there exists considerable variability of ULSW and classical LSW formation on decadal scales.

Description: Shells of the blue mussel Mytilus edulis remain free of fouling organisms as long as they possess an intact periostracum, and a multiple antifouling defence that comprises a ripple-like microtopography and the production of chemical antifouling compounds has been suggested previously. This study investigates the chemical defence strategy of blue mussels for the first time. Six crude extracts of the periostracum of intact shells were made using solvents of increasing polarity. These extracts were tested against common fouling organisms in laboratory based bioassays. Non-polar and moderately polar fractions showed the highest activities: the diethyl ether fraction strongly inhibited attachment of Balanus amphitrite cyprids and the marine bacteria Cobetia marina and Marinobacter hydrocarbonoclasticus. Attachment of the benthic diatom Amphora coffeaeformis was significantly reduced by the dichloromethane extract, whereas both ethyl acetate and diethyl ether fractions slowed diatom growth. These results provide the first evidence of surface bound compounds that may moderate surface colonisation.

Description: Perfect model ensemble experiments are performed with five coupled atmosphere-ocean models to investigate the potential for initial-value climate forecasts on interannual to decadal time scales. Experiments are started from similar initial states and common diagnostics of predictability are used. We find that; variations in the ocean Meridional Overturning Circulation are potentially predictable on interannual to decadal time scales, a more consistent picture of the surface temperature impact of decadal variations in the MOC is now apparent, and variations of surface air temperatures in the N. Atlantic are also potentially predictable on interannual to decadal time scales, albeit with potential skill levels which are less than those seen for MOC variations. This inter-comparison represents a step forward in assessing the robustness of model estimates of potential skill and is a pre-requisite for the development of any operational forecasting system

Description: This review paper discusses the physical basis and the potential for decadal climate predictability over the Atlantic and its adjacent land areas. Many observational and modeling studies describe pronounced decadal and multidecadal variability in the Atlantic Ocean. However, it still needs to be quantified to which extent the variations in the ocean drive variations in the atmosphere and over land. In particular, although a clear impact of the Tropics on the midlatitudes has been demonstrated, it is unclear if and how the extratropical atmosphere responds to midlatitudinal sea surface temperature anomalies. Although the mechanisms behind the decadal to multidecadal variability in the Atlantic sector are still controversial, there is some consensus that some of the longer-term multidecadal variability is driven by variations in the thermohaline circulation. The variations in the North Atlantic thermohaline circulation appear to be predictable one to two decades ahead, as shown by a number of perfect model predictability experiments. The next few decades will be dominated by these multidecadal variations, although the effects of anthropogenic climate change are likely to introduce trends. Some impact of the variations of the thermohaline circulation on the atmosphere has been demonstrated in some studies so that useful decadal predictions with economic benefit may be possible.

Description: Sea level changes in the Baltic Sea are dominated by internal, short-term variations that are mostly caused by the ephemeral nature of atmospheric conditions over the Baltic area. Tides are small and their influence decreases from western parts of the Baltic Sea to the Baltic Proper. Superimposed to the large short-term sea level changes (up to few decimeters from day to day) are seasonal and interannual variations (centimeters to decimeters). This study focuses on the comparison of sea surface heights obtained from observations and from a high resolution oceanographic model of the Baltic Sea. From this comparison, the accuracy of the modeled sea surface variations is evaluated, which is a necessary precondition for the further use of the oceanographic model in geodetic applications. The model reproduces all observed Baltic sea level variations very reliably with an accuracy of 5 to 9 cm (rms) for short-term variations (up to 2 months) and 8 cm (rms) for long-term variations (〉2 months). An additional improvement of the model can be attained by including long-period sea level variations of the North Sea. The model performs well also in the case of extreme sea level events, as is shown for a major storm surge that occurred at the southern coast of the Baltic Sea in November 1995.

Description: Modern antifouling coatings use heavy metals and toxic organic molecules to prevent biofouling, the undesirable growth of marine organisms on man-made substrata. In an ongoing survey of deep-sea microorganisms aimed at finding low toxic antifouling metabolites, an actinomycete bacterium was isolated from the Pacific sediment at the depth of about 5000 m. The bacterium was closely related to Streptomyces fungicidicus (99% similarity) according to 16S ribosomal RNA sequence information. The spent culture medium of this bacterium inhibited barnacle larval attachment. Bioassay-guided fractionation was employed to isolate antifouling compounds. The ethyl acetate extract was fractionated by using an open silica gel column. Active fractions were further purified on a HPLC C18 column. Five diketopiperazines, cyclo-(L-Leu-L-Pro), cyclo-(L-Phe-L-Pro), cyclo-(L-Val-L-Pro), cyclo-(L-Trp-L-Pro), and cyclo-(L-Leu-L-Val) were isolated for the first time from a deep sea bacterium, and the structures of the compounds were elucidated by nuclear magnetic resonance spectroscopy and mass spectrometry. The pure diketopiperazines were tested for antilarval activity using the barnacle Balanus amphitrite. Effective concentrations that inhibited 50% larval attachment (EC50) after 24 h ranged from 0.10- 0.27 mM. The data suggest that diketopiperazines and other compounds from deep-sea bacteria may be used as novel antifoulants.

Description: The multidecadal climate variability in the North Pacific region is investigated by using a 2000-yr-long integration with a coupled ocean–atmosphere general circulation model. It is shown that the multidecadal variability evolves largely independent of the variations in the tropical Pacific, so that this kind of multidecadal variability may be regarded as internal to the North Pacific. The coupled model results suggest that the multidecadal variability can be explained by the dynamical ocean response to stochastic wind stress forcing. Superimposed on the red background variability, a multidecadal mode with a period of about 40 yr is simulated by the coupled model. This mode can be understood through the concept of spatial resonance between the ocean and the atmosphere.

Description: The tropical oceans have long been recognized as the most important region for large-scale ocean–atmosphere interactions, giving rise to coupled climate variations on several time scales. During the Tropical Ocean Global Atmosphere (TOGA) decade, the focus of much tropical ocean research was on understanding El Niño–related processes and on development of tropical ocean models capable of simulating and predicting El Niño. These studies led to an appreciation of the vital role the ocean plays in providing the memory for predicting El Niño and thus making seasonal climate prediction feasible. With the end of TOGA and the beginning of Climate Variability and Prediction (CLIVAR), the scope of climate variability and predictability studies has expanded from the tropical Pacific and ENSO-centric basis to the global domain. In this paper the progress that has been made in tropical ocean climate studies during the early years of CLIVAR is discussed. The discussion is divided geographically into three tropical ocean basins with an emphasis on the dynamical processes that are most relevant to the coupling between the atmosphere and oceans. For the tropical Pacific, the continuing effort to improve understanding of large- and small-scale dynamics for the purpose of extending the skill of ENSO prediction is assessed. This paper then goes beyond the time and space scales of El Niño and discusses recent research activities on the fundamental issue of the processes maintaining the tropical thermocline. This includes the study of subtropical cells (STCs) and ventilated thermocline processes, which are potentially important to the understanding of the low-frequency modulation of El Niño. For the tropical Atlantic, the dominant oceanic processes that interact with regional atmospheric feedbacks are examined as well as the remote influence from both the Pacific El Niño and extratropical climate fluctuations giving rise to multiple patterns of variability distinguished by season and location. The potential impact of Atlantic thermohaline circulation on tropical Atlantic variability (TAV) is also discussed. For the tropical Indian Ocean, local and remote mechanisms governing low-frequency sea surface temperature variations are examined. After reviewing the recent rapid progress in the understanding of coupled dynamics in the region, this study focuses on the active role of ocean dynamics in a seasonally locked east–west internal mode of variability, known as the Indian Ocean dipole (IOD). Influences of the IOD on climatic conditions in Asia, Australia, East Africa, and Europe are discussed. While the attempt throughout is to give a comprehensive overview of what is known about the role of the tropical oceans in climate, the fact of the matter is that much remains to be understood and explained. The complex nature of the tropical coupled phenomena and the interaction among them argue strongly for coordinated and sustained observations, as well as additional careful modeling investigations in order to further advance the current understanding of the role of tropical oceans in climate.

Description: The influence of phytoplankton on the seasonal cycle and the mean global climate is investigated in a fully coupled climate model. The control experiment uses a fixed attenuation depth for shortwave radiation, while the attenuation depth in the experiment with biology is derived from phytoplankton concentrations simulated with a marine biogeochemical model coupled online to the ocean model. Some of the changes in the upper ocean are similar to the results from previous studies that did not use interactive atmospheres, for example, amplification of the seasonal cycle; warming in upwelling regions, such as the equatorial Pacific and the Arabian Sea; and reduction in sea ice cover in the high latitudes. In addition, positive feedbacks within the climate system cause a global shift of the seasonal cycle. The onset of spring is about 2 weeks earlier, which results in a more realistic representation of the seasons. Feedback mechanisms, such as increased wind stress and changes in the shortwave radiation, lead to significant warming in the midlatitudes in summer and to seasonal modifications of the overall warming in the equatorial Pacific. Temperature changes also occur over land where they are sometimes even larger than over the ocean. In the equatorial Pacific, the strength of interannual SST variability is reduced by about 10%–15% and phase locking to the annual cycle is improved. The ENSO spectral peak is broader than in the experiment without biology and the dominant ENSO period is increased to around 5 yr. Also the skewness of ENSO variability is slightly improved. All of these changes lead to the conclusion that the influence of marine biology on the radiative budget of the upper ocean should be considered in detailed simulations of the earth’s climate.

Description: Analyses of ocean observations and model simulations suggest that there have been considerable changes in the thermohaline circulation (THC) during the last century. These changes are likely to be the result of natural multidecadal climate variability and are driven by low-frequency variations of the North Atlantic Oscillation (NAO) through changes in Labrador Sea convection. Indications of a sustained THC weakening are not seen during the last few decades. Instead, a strengthening since the 1980s is observed. The combined assessment of ocean hydrography data and model results indicates that the expected anthropogenic weakening of the THC will remain within the range of natural variability during the next several decades

Description: This paper describes the mean ocean circulation and the tropical variability simulated by the Max Planck Institute for Meteorology (MPI-M) coupled atmosphere–ocean general circulation model (AOGCM). Results are presented from a version of the coupled model that served as a prototype for the Intergovernmental Panel on Climate Change (IPCC) Fourth Assessment Report (AR4) simulations. The model does not require flux adjustment to maintain a stable climate. A control simulation with present-day greenhouse gases is analyzed, and the simulation of key oceanic features, such as sea surface temperatures (SSTs), large-scale circulation, meridional heat and freshwater transports, and sea ice are compared with observations. A parameterization that accounts for the effect of ocean currents on surface wind stress is implemented in the model. The largest impact of this parameterization is in the tropical Pacific, where the mean state is significantly improved: the strength of the trade winds and the associated equatorial upwelling weaken, and there is a reduction of the model’s equatorial cold SST bias by more than 1 K. Equatorial SST variability also becomes more realistic. The strength of the variability is reduced by about 30% in the eastern equatorial Pacific and the extension of SST variability into the warm pool is significantly reduced. The dominant El Niño–Southern Oscillation (ENSO) period shifts from 3 to 4 yr. Without the parameterization an unrealistically strong westward propagation of SST anomalies is simulated. The reasons for the changes in variability are linked to changes in both the mean state and to a reduction in atmospheric sensitivity to SST changes and oceanic sensitivity to wind anomalies.

Description: Development of microbial biofilms and the recruitment of propagules on the surfaces of man-made structures in the marine environment cause serious problems for the navies and for marine industries around the world. Current antifouling technology is based on the application of toxic substances that can be harmful to the natural environment. For this reason and the global ban of tributyl tin (TBT), there is a need for the development of “environmentally-friendly” antifoulants. Marine microbes are promising potential sources of non-toxic or less-toxic antifouling compounds as they can produce substances that inhibit not only the attachment and/or growth of microorganisms but also the settlement of invertebrate larvae and macroalgal spores. However, so far only few antilarval settlement compounds have been isolated and identified from bacteria. In this review knowledge about antifouling compounds produced by marine bacteria and diatoms are summarised and evaluated and future research directions are highlighted.

Description: The purpose of this study was to monitor and evaluate the specific characteristics and properties of the most important water resources in Dalmatia, located in Southern Croatia, for a period of five years (1999–2003). The paper presents a detailed account of the water's chemical content, classification and concentration of salts. The bacteriological pollution levels are indicated by the total coliform bacterial levels (MPN coli/100 ml). The water characteristics are expressed by coefficients which represent the ratios between water ingredients. The Ca/Mg eq ratio, SO4/Cl eq ratio and K1, K2 for bicarbonate hardness were calculated. The hygienic characteristics of the water samples were expressed by the total coliform bacteria estimation (MPN coli/100 ml), the permanganate consumption (KMnO4) and biological oxygen demand (BOD5). Karst waters, i.e. rain waters, in Dalmatia are moderately hard, the SO4/Cl ratio is 0.38-1.6, non corrosive (K1 lower than 0.2) and not significantly mineralised (〈500 mg/L minerals). Sulfate waters are generally hard, the SO4/Cl ratio is higher than 1.6, K1 is 0.2-0.65. Marine waters are quite hard or hard, particularly at the river estuaries, the SO4/Cl ratio is lower than 0.38, and K1 is higher than 0.65. Rain water direction equation, marine direction equation and sulfate direction equation are calculated on the base of SO4/Cl ratio. The groundwater and springs in Dalmatia are less polluted than surface waters. A majority of the water observed, 24 of 42 locations, have geometric average values of MPN coli〈150/100 ml of water. This group includes the majority of springs in Dalmatia, as well as some sections of rivers studied. The highest bacteriological pollution was found at nine locations where MPN coli〉1000/100 ml. Moderate pollution was found at nine locations where MPN coli is between 150–1000/100 ml of water. The water in Dalmatia is quite safe and mainly preserves its natural properties.

Description: A study of Rossia macrosoma in Portuguese waters with emphasis on its biogeographical, biological and biochemical characteristics is presented. Approximately 1000 specimens collected in 32 cruises between 1990 and 2003 were used to determine the distribution and abundance of the species and some population biology parameters (weight, length, sex and maturation). The first biochemical characterization of the species at different stages of gonad development was made. The species was found at depths up to 860 m along the whole Portuguese coast. The sex ratio was approximately 1:1 and did not vary with depth or position along the coast (P≫0.05). Females grew larger (84:67 mm mantle length) and heavier (161:100 g total body weight) than males. Mature specimens of both sexes constituted 〈1% of all records. Immature and maturing specimens were found year round, without significant differences between female monthly distributions (P 〉 0.05). No significant difference between sexes in the distribution of maturity stages with depth or position along the coast was noted (P≫0.05). During sexual maturation there was a significant increase (P 〈 0.05) in total amino acid, protein, lipid and fatty acid contents in the gonad, but the allocation of these organic compounds from digestive gland and muscle was not evident. In the three tissues analysed, the major fatty acids were 16:0, 18:0, 18:1, 20:1, 20:4n-6, 20:5n-3 and 22:6n-3, the major essential amino acids were lysine, leucine and arginine and the major non-essential amino acids were glutamic acid, aspartic acid and serine.

Description: A visible pathological condition located in the arms and mantle of the Hubb octopus Octopus hubbsorum from the Northeast Pacific waters is described for the first time. Histological sections confirmed later stages (fibrosis) of a chronic inflammatory condition of unknown aetiology.

Description: Sexual dimorphism in size and morphology of the lower beak of the warty onychoteuthid squid Moroteuthis ingens is analysed. Beaks of maturing males exhibit a band of weak, clear cartilage across the shoulder region, while mature males exhibit a pronounced excavation of this area; the hood remains intact. Female beaks attain greater size, but relatively shorter lower rostral lengths (LRL) than those of males; they display neither the shoulder cartilage nor later erosion, but the hood is consistently eroded in mature specimens. The angle ridge in females is considerably longer than in males. Due to the difference in LRL relative to overall beak size, M. ingens beaks from predator stomachs should be sexed prior to calculating prey size using LRL; for both sexes, the LRL‐mantle length (ML) relationship is linear while the LRL‐weight relationship is exponential. Sex‐specific equations are provided for reconstructing ML and weight using LRL. Based on several incidences of male‐female pairs collected with beaks interlocked, M. ingens is postulated to mate in a head‐to‐head position, with both individuals incurring beak damage during the event.

Description: A long-synonymized species Benthoctopus normani (Massy 1907) (Cephalopoda: Octopodidae) is redescribed from material collected over 30 years by the National Oceanography Centre, Southampton and the National Museums of Scotland. It can be distinguished from other octopodid specimens found in deep waters of the Northeast Atlantic by its biserial suckers, lack of ink sac, and simple ligula, which lacks transverse ridges. Examination of the collections led to the identification of a new species of Benthoctopus from the Northeast Atlantic, which is described herein.

Description: This paper analyses secular changes and interannual variability in the wind wave, swell, and significant wave height (SWH) characteristics over the North Atlantic and North Pacific on the basis of wind wave climatology derived from the visual wave observations of voluntary observing ship (VOS) officers. These data are available from the International Comprehensive Ocean–Atmosphere Data Set (ICOADS) collection of surface meteorological observations for 1958–2002, but require much more complicated preprocessing than standard meteorological variables such as sea level pressure, temperature, and wind. Visual VOS data allow for separate analysis of changes in wind sea and swell, as well as in significant wave height, which has been derived from wind sea and swell estimates. In both North Atlantic and North Pacific midlatitudes winter significant wave height shows a secular increase from 10 to 40 cm decade−1 during the last 45 yr. However, in the North Atlantic the patterns of trend changes for wind sea and swell are quite different from each other, showing opposite signs of changes in the northeast Atlantic. Trend patterns of wind sea, swell, and SWH in the North Pacific are more consistent with each other. Qualitatively the same conclusions hold for the analysis of interannual variability whose leading modes demonstrate noticeable differences for wind sea and swell. Statistical analysis shows that variability in wind sea is closely associated with the local wind speed, while swell changes can be driven by the variations in the cyclone counts, implying the importance of forcing frequency for the resulting changes in significant wave height. This mechanism of differences in variability patterns of wind sea and swell is likely more realistic than the northeastward propagation of swells from the regions from which the wind sea signal originates.

Description: It is becoming increasingly recognized that the eddy field plays an important—possibly dominating—role for oceanic motions in many aspects (e.g., transport of properties and risk assessment in the case of extreme events). This motivates the study of individual eddy events. In the Lagrangian coordinate system, vorticity possibly associated with eddies appears in two forms: as shear vorticity between neighboring particles, and as curvature of the trajectory of a single particle. Typical field experiments in physical oceanography using surface drifters or subsurface floats do not reach data densities high enough to produce enough encounters of drifters to calculate shear vorticity between them. However, curvature in individual tracks is easily observed. This study presents a methodology that extracts segments from within a trajectory that are “looping,” which will be interpreted as a drifter being caught in an eddy. The method makes use of autoregressive processes, a simple type of stochastic processes, which easily enables a fit to the nonperfectly shaped trajectory data usually expected from field experiments. These processes also deliver frequency and persistence of the detected eddies by a very simple calculation, which makes the methodology highly suited for automatized scanning of larger datasets.

Description: The influence of the natural multidecadal variability of the Atlantic meridional overturning circulation (MOC) on European climate is investigated using a simulation with the coupled atmosphere–ocean general circulation model ECHAM5/Max Planck Institute Ocean Model (MPI-OM). The results show that Atlantic MOC fluctuations, which go along with changes in the northward heat transport, in turn affect European climate. Additionally, ensemble predictability experiments with ECHAM5/MPI-OM show that the probability density functions of surface air temperatures in the North Atlantic/European region are affected by the multidecadal variability of the large-scale oceanic circulation. Thus, some useful decadal predictability may exist in the Atlantic/European sector.