ALBERT

Description: A simple analytical model of the atmospheric boundary layer (ABL) coupled to sea ice is presented. It describes clear-sky cooling over sea ice during polar night in the presence of leads. The model solutions show that the sea ice concentration and wind speed have a strong impact on the thermal regime over sea ice. Leads cause both a warming of the ABL and an increase of stability over sea ice. The model describes a sharp ABL transition from a weakly stable coupled state to a strongly stable decoupled state when wind speed is decreasing. The threshold value of the transition wind speed is a function of sea ice concentration. The decoupled state is characterized by a large air–surface temperature difference over sea ice, which is further increased by leads. In the coupled regime, air and surface temperatures increase almost linearly with wind speed due to warming by leads and also slower cooling of the ABL. The cooling time scale shows a nonmonotonic dependency on wind speed, being lowest for the threshold value of wind speed and increasing for weak and strong winds. Theoretical solutions agree well with results of a more realistic single-column model and with observations performed at the three Russian “North Pole” drifting stations (NP-35, -37, and -39) and at the Surface Heat Budget of the Arctic Ocean ice camp. Both modeling results and observations show a strong implicit dependency of the net longwave radiative flux at the surface on wind speed.

Description: Zooplankton in Kongsfjorden, Svalbard, is shaped by irregular advection of seawater from the West Spitsbergen Current as well as input of freshwater of glacial and riverine origin. The zooplankton community reflects contributions of Arctic vs. Atlantic water masses in the fjord, and is changing with increasing temperature and declining sea ice. Here, we review zooplankton studies from Kongsfjorden, and present new data from a 20-year time series (1996–2016) of zooplankton abundance/biomass in the fjord based on annual surveys during summer. During the last decade, the marine environment of the West Spitsbergen Shelf and adjacent fjords has undergone changes with increasing temperatures and volume of inflowing Atlantic Water and declining sea ice. Annual monitoring of mesozooplankton since 1996 has shown high seasonal, spatial, and inter-annual variation in species abundance and biomass, and in the proportion of Atlantic and Arctic species. Inter-annual variations in species composition and abundance demonstrate fluctuating patterns related to changes in hydrography. “Warm years” in Kongsfjorden were characterized by higher abundances of Atlantic species, such as Calanus finmarchicus, Oithona atlantica, Thysanoessa longicaudata and Themisto abyssorum. Other krill species, particularly Thysanoessa inermis and to a lesser extent T. longicaudata, increased in abundance during the warming period in 2006–2007, mainly in the inner basin. “Cold years”, on the other hand, were characterized by higher abundance of Themisto libellula. There was no clear impact, however, of changes in environmental factors on the abundance or biomass of the Arctic species Calanus glacialis suggesting that the changes in environmental conditions have not reached critical levels for this species. The long-term zooplankton data demonstrate that some Atlantic species have become more abundant in the Kongsfjorden’s pelagic realm, suggesting that they may benefit from increasing temperature, and also that the total biomass of zooplankton has increased in the fjord implying potentially higher secondary production.

Description: Proxy data and observations suggest that large tropical volcanic eruptions induce a poleward shift of the North Atlantic jet stream in boreal winter. However, there is far from universal agreement in models on this effect and its mechanism, and the possibilities of a corresponding jet shift in the Southern Hemisphere or the summer season have received little attention. Using a hierarchy of simplified atmospheric models, this study examines the impact of stratospheric aerosol on the extratropical circulation over the annual cycle. In particular, the models allow the separation of the dominant shortwave (surface cooling) and longwave (stratospheric warming) impacts of volcanic aerosol. It is found that stratospheric warming shifts the jet poleward in both summer and winter hemispheres. The experiments cannot definitively rule out the role of surface cooling, but provide no evidence that it shifts the jet poleward. Further study with simplified models demonstrates that the response to stratospheric warming is remarkably generic and does not depend critically on the boundary conditions (e.g., the planetary wave forcing) or the atmospheric physics (e.g., the treatment of radiative transfer and moist processes). It does, however, fundamentally involve both zonal-mean and eddy circulation feedbacks. The timescales, seasonality, and structure of the response provide further insight into the mechanism, as well as its connection to modes of intrinsic natural variability. These findings have implications for the interpretation of comprehensive model studies and for post-volcanic prediction

Description: Ice sheets are currently ignored in global methane budgets1,2. Although ice sheets have been proposed to contain large reserves of methane that may contribute to a rise in atmospheric methane concentration if released during periods of rapid ice retreat3,4, no data exist on the current methane footprint of ice sheets. Here we find that subglacially produced methane is rapidly driven to the ice margin by the efficient drainage system of a subglacial catchment of the Greenland ice sheet. We report the continuous export of methane-supersaturated waters (CH4(aq)) from the ice-sheet bed during the melt season. Pulses of high CH4(aq) concentration coincide with supraglacially forced subglacial flushing events, confirming a subglacial source and highlighting the influence of melt on methane export. Sustained methane fluxes over the melt season are indicative of subglacial methane reserves that exceed methane export, with an estimated 6.3 tonnes (discharge-weighted mean; range from 2.4 to 11 tonnes) of CH4(aq) transported laterally from the ice-sheet bed. Stable-isotope analyses reveal a microbial origin for methane, probably from a mixture of inorganic and ancient organic carbon buried beneath the ice. We show that subglacial hydrology is crucial for controlling methane fluxes from the ice sheet, with efficient drainage limiting the extent of methane oxidation5 to about 17 per cent of methane exported. Atmospheric evasion is the main methane sink once runoff reaches the ice margin, with estimated diffusive fluxes (4.4 to 28 millimoles of CH4 per square metre per day) rivalling that of major world rivers6. Overall, our results indicate that ice sheets overlie extensive, biologically active methanogenic wetlands and that high rates of methane export to the atmosphere can occur via efficient subglacial drainage pathways. Our findings suggest that such environments have been previously underappreciated and should be considered in Earth’s methane budget.

Description: Near-term climate predictions — which operate on annual to decadal timescales — offer benefits for climate adaptation and resilience, and are thus important for society. Although skilful near-term predictions are now possible, particularly when coupled models are initialized from the current climate state (most importantly from the ocean), several scientific challenges remain, including gaps in understanding and modelling the underlying physical mechanisms. This Perspective discusses how these challenges can be overcome, outlining concrete steps towards the provision of operational near-term climate predictions. Progress in this endeavour will bridge the gap between current seasonal forecasts and century-scale climate change projections, allowing a seamless climate service delivery chain to be established.

Description: The fibrous calcite layer of modern brachiopod shells is a hybrid composite material and forms a substantial part of the hard tissue. We investigated how cells of the outer mantle epithelium (OME) secrete calcite material and generate the characteristic fibre morphology and composite microstructure of the shell. We employed AFM, FE-SEM, and TEM imaging of embedded/etched, chemically fixed/decalcified and high-pressure frozen/freeze substituted samples. Calcite fibres are secreted by outer mantle epithelium (OME) cells. Biometric analysis of TEM micrographs indicates that about 50% of these cells are attached via hemidesmosomes to an extracellular organic membrane present at the proximal, convex surface of the fibres. At these sites, mineral secretion is not active. Instead, ion transport from OME cells to developing fibres occurs at regions of closest contact between cells and fibres, however only at sites where the extracellular membrane at the proximal fibre surface is not developed yet. Fibre formation requires the cooperation of several adjacent OME cells. It is a spatially and temporally changing process comprising of detachment of OME cells from the extracellular organic membrane, mineral secretion at detachment sites, termination of secretion with formation of the extracellular organic membrane, and attachment of cells via hemidesmosomes to this membrane.

Description: Marine sponges are early-branching, filter-feeding metazoans that usually host complex microbiomes comprised of several, currently uncultivatable symbiotic lineages. Here, we use a low-carbon based strategy to cultivate low-abundance bacteria from Spongia officinalis. This approach favoured the growth of Alphaproteobacteria strains in the genera Anderseniella, Erythrobacter, Labrenzia, Loktanella, Ruegeria, Sphingorhabdus, Tateyamaria and Pseudovibrio, besides two likely new genera in the Rhodobacteraceae family. Mapping of complete genomes against the metagenomes of S. officinalis, seawater, and sediments confirmed the rare status of all the above-mentioned lineages in the marine realm. Remarkably, this community of low-abundance Alphaproteobacteria possesses several genomic attributes common to dominant, presently uncultivatable sponge symbionts, potentially contributing to host fitness through detoxification mechanisms (e.g. heavy metal and metabolic waste removal, degradation of aromatic compounds), provision of essential vitamins (e.g. B6 and B12 biosynthesis), nutritional exchange (especially regarding the processing of organic sulphur and nitrogen) and chemical defence (e.g. polyketide and terpenoid biosynthesis). None of the studied taxa displayed signs of genome reduction, indicative of obligate mutualism. Instead, versatile nutrient metabolisms along with motility, chemotaxis, and tight-adherence capacities - also known to confer environmental hardiness – were inferred, underlying dual host-associated and free-living life strategies adopted by these diverse sponge-associated Alphaproteobacteria.

Description: The aim of the present study was to investigate the impact of dietary plant proteins on the gut microbiome of first feeding brown trout (Salmo trutta) reproduced from wild stocks and to evaluate whether the initial microbiome of brown trout fry can be permanently manipulated by the first feeding diet. Therefore, brown trout fry was fed diets based on either 0%, 50% or 90% plant-derived proteins from first feeding onwards and via 16S rRNA gene sequencing a strong dietary influence on the bacterial gut community on phylum and order level was detected. Proteobacteria and Fusobacteria were significantly enhanced when fishmeal was integrated into the experimental diet, whereas plant-derived proteins significantly promoted Firmicutes and Bacteroidetes. In order to evaluate whether the first feeding diet had a permanent effect on the initially established microbial gut community of juvenile brown trout, a cross-over diet-change was applied 61 days post first feeding. 48 days after the diet-change, the gut microbiome of all dietary groups was significantly different from the one initially established after first feeding. Moreover, the first feeding diet had no statistically significant influence on the gut microbiome after the diet-change, demonstrating no permanent effect on the gut microbiome formation.