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    Publication Date: 2021-03-11
    Description: With high mortality and poor prognosis, hepatocellular carcinoma (LIHC) has become the fourth leading cause of cancer-related deaths worldwide. Most of the LIHC patients missed the best treatment period because of the untimely diagnosis. For others, even if they are temporarily cured, they have to face a very low prognostic survival rate and a very high risk of recurrence. Based on the characteristics of abnormal proliferation and uncontrolled growth of tumor cells. Cell Division Cycle Associated (CDCA) family genes, which are responsible for regulating the cell cycle and proliferation, were selected as our research object to explore the mechanism of hepatocarcinogenesis. To this end, we investigated the expression profiles of CDCA family genes in LIHC and corresponding normal tissues, and the effect of CDCAs expression on the survival of prognosis and immune cell infiltration through bioinformatics analysis methods and the publicly accessible online databases. In addition, we also analyzed the expression correlation of CDCAs and screened the neighboring genes related to functional CDCAs. The results revealed that the expression levels of CDCA1/3/5/8 were significantly increased in LIHC, regardless of stage, sex, race, drinking behavior, and other clinical factors. CDCAs expression was significantly correlated with poor prognosis and was positively correlated with the infiltration of dendritic cells, B cells, and macrophages. We also found that the most relevant neighboring genes to CDCAs in LIHC were SGO2, NDC80, BIRC5, INCENP, and PLOD1. In general, our work suggests that CDCA1/3/5/8 has the potential to be a diagnostic gene in hepatocarcinogenesis and prognostic biomarkers for LIHC patients.
    Electronic ISSN: 2296-889X
    Topics: Biology
    Published by Frontiers Media
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  • 7
    Publication Date: 2021-02-25
    Description: BackgroundAlthough gut hormone glucagon-like peptide 1 (GLP-1) has been widely used for treating diabetes, the extremely short half-life greatly limits its application. The purpose of this study is to explore the effects of an engineered bacteria with expression of GLP-1 on obese mice induced by high fat diet (HFD).MethodsThe engineered strain of MG1363-pMG36e-GLP-1 (M-GLP-1) was constructed and its anti-obesity effects were evaluated in vivo. The bodyweight, the morphology of adipose and liver tissue, and liver function were examined. Quantitative RT-PCR and Western blot were used to measure the expressions of the genes involved in fatty acid oxidation synthesis. The intestinal microbial diversity was detected with high-throughput sequencing analysis.ResultsThe engineered bacteria could produce GLP-1. It also significantly decreased the bodyweight and improved the glucose intolerance in the obese mice induced by HFD. Moreover, the strain also reduced the triglyceride (TG) in serum, protected liver, as well as decreased the intracellular TG in liver tissues of the obese mice. Furthermore, our results showed that the expressions of the genes including peroxisome proliferator-activated receptors α (PPARα) and its target genes were enhanced in liver tissues when mice treated with M-GLP-1. Finally, we found that the engineered strain markedly increased intestinal microbial diversity.ConclusionOur results suggested the genetically engineered bacteria that constitutively secreted GLP-1 could improve obesity and the mechanism may be related to promoting fatty acid oxidation and increasing intestinal microbial diversity of the obese mice.
    Electronic ISSN: 2235-2988
    Topics: Biology , Medicine
    Published by Frontiers Media
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  • 8
    Publication Date: 2022-10-26
    Description: © The Author(s), 2021. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Schlegel, R. W., Oliver, E. C. J., & Chen, K. Drivers of marine heatwaves in the Northwest Atlantic: the role of air-sea interaction during onset and decline. Frontiers in Marine Science, 8, (2021): 627970, https://doi.org/10.3389/fmars.2021.627970
    Description: Marine heatwaves (MHWs) are increasing in duration and intensity at a global scale and are projected to continue to increase due to the anthropogenic warming of the climate. Because MHWs may have drastic impacts on fisheries and other marine goods and services, there is a growing interest in understanding the predictability and developing practical predictions of these events. A necessary step toward prediction is to develop a better understanding of the drivers and processes responsible for the development of MHWs. Prior research has shown that air–sea heat flux and ocean advection across sharp thermal gradients are common physical processes governing these anomalous events. In this study we apply various statistical analyses and employ the self-organizing map (SOM) technique to determine specifically which of the many candidate physical processes, informed by a theoretical mixed-layer heat budget, have the most pronounced effect on the onset and/or decline of MHWs on the Northwest Atlantic continental shelf. It was found that latent heat flux is the most common driver of the onset of MHWs. Mixed layer depth (MLD) also strongly modulates the onset of MHWs. During the decay of MHWs, atmospheric forcing does not explain the evolution of the MHWs well, suggesting that oceanic processes are important in the decay of MHWs. The SOM analysis revealed three primary synoptic scale patterns during MHWs: low-pressure cyclonic Autumn-Winter systems, high-pressure anti-cyclonic Spring-Summer blocking, and mild but long-lasting Summer blocking. Our results show that nearly half of past MHWs on the Northwest Atlantic shelf are initiated by positive heat flux anomaly into the ocean, but less than one fifth of MHWs decay due to this process, suggesting that oceanic processes, e.g., advection and mixing are the primary driver for the decay of most MHWs.
    Description: RS was supported by the Ocean Frontier Institute International Postdoctoral Fellowship hosted jointly by Dalhousie University and Woods Hole Oceanographic Institution, through an award from the Canada First Research Excellence Fund. EO was funded through the National Sciences and Engineering Research Council of Canada Discovery Grant RGPIN-2018-05255 and Marine Environmental Observation, Prediction, and Response Network Early Career Faculty Grant 1-02-02-059.1. KC was supported by National Oceanic and Atmospheric Administration Climate Program Office Modeling, Analysis, Predictions, and Projections (MAPP) program under grant NA19OAR4320074 and Climate Variability and Predictability (CVP) program under grant NA20OAR4310398.
    Keywords: Marine heatwaves ; Air-sea heat flux ; Drivers ; Northwest Atlantic ; SST ; Physical oceanography
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 9
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gawarkiewicz, G., Chen, K., Forsyth, J., Bahr, F., Mercer, A. M., Ellertson, A., Fratantoni, P., Seim, H., Haines, S., & Han, L. Characteristics of an advective Marine Heatwave in the Middle Atlantic Bight in early 2017. Frontiers in Marine Science, 6, (2019): 712, doi: 10.3389/fmars.2019.00712.
    Description: There has been wide interest in Marine Heatwaves and their ecological consequences in recent years. Most analyses have focused on remotely sensed sea surface temperature data due to the temporal and spatial coverage it provides in order to establish the presence and duration of Heatwaves. Using hydrographic data from a variety of sources, we show that an advective Marine Heatwave was initiated by an event in late December of 2016 south of New England, with temperature anomalies measuring up to 6°C and salinity anomalies exceeding 1 PSU. Similar features were observed off of New Jersey in February 2017, and are associated with the Shelfbreak Front migrating from its normal position to mid-shelf or further onshore. Shelf water of 34 PSU was observed just north of Cape Hatteras at the 30 m isobath and across the continental shelf in late April 2017. These observations reveal that the 2017 Marine Heatwave was associated with a strong positive salinity anomaly, that its total duration was approximately 4 months, and its advective path extended roughly 850 km along the length of the continental shelf in the Middle Atlantic Bight. The southward advective velocity implied by the arrival north of Cape Hatteras is consistent with previous estimates of alongshelf velocity for the region. The origin of this Marine Heatwave is likely related to cross-shelf advection driven by the presence of a Warm Core Ring adjacent to the shelfbreak south of New England.
    Description: GG was supported by the van Beuren Charitable Foundation, the National Science Foundation under grants OCE-1657853 and OCE-1558521 as well as a Senior Scientist Chair from the Woods Hole Oceanographic Institution. KC was supported by the National Science Foundation under grants OCE-1558960 and OCE-1634094. JF was supported by the National Science Foundation OCE-1634094. AM and AE were supported by the van Beuren Charitable Foundation. HS, SH, and LH were supported by the National Science Foundation OCE-1558920.
    Keywords: Heatwave ; Middle Atlantic Bight ; Shelfbreak front ; Warm core ring ; Coastal ocean circulation
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 10
    Publication Date: 2022-10-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Benthuysen, J. A., Oliver, E. C. J., Chen, K., & Wernberg, T. Editorial: advances in understanding marine heatwaves and their impacts. Frontiers in Marine Science, 7, (2020): 147, doi:10.3389/fmars.2020.00147.
    Description: Editorial on the Research Topic Advances in Understanding Marine Heatwaves and Their Impacts In recent years, prolonged, extremely warm water events, known as marine heatwaves, have featured prominently around the globe with their disruptive consequences for marine ecosystems. Over the past decade, marine heatwaves have occurred from the open ocean to marginal seas and coastal regions, including the unprecedented 2011 Western Australia marine heatwave (Ningaloo Niño) in the eastern Indian Ocean (e.g., Pearce et al., 2011), the 2012 northwest Atlantic marine heatwave (Chen et al., 2014), the 2012 and 2015 Mediterranean Sea marine heatwaves (Darmaraki et al., 2019), the 2013/14 western South Atlantic (Rodrigues et al., 2019) and 2017 southwestern Atlantic marine heatwave (Manta et al., 2018), the persistent 2014–2016 “Blob” in the North Pacific (Bond et al., 2015; Di Lorenzo and Mantua, 2016), the 2015/16 marine heatwave spanning the southeastern tropical Indian Ocean to the Coral Sea (Benthuysen et al., 2018), and the Tasman Sea marine heatwaves in 2015/16 (Oliver et al., 2017) and 2017/18 (Salinger et al., 2019). These events have set new records for marine heatwave intensity, the temperature anomaly exceeding a climatology, and duration, the sustained period of extreme temperatures. We have witnessed the profound consequences of these thermal disturbances from acute changes to marine life to enduring impacts on species, populations, and communities (Smale et al., 2019). These marine heatwaves have spurred a diversity of research spanning the methodology of identifying and quantifying the events (e.g., Hobday et al., 2016) and their historical trends (Oliver et al., 2018), understanding their physical mechanisms and relationships with climate modes (e.g., Holbrook et al., 2019), climate projections (Frölicher et al., 2018), and understanding the biological impacts for organisms and ecosystem function and services (e.g., Smale et al., 2019). By using sea surface temperature percentiles, temperature anomalies can be quantified based on their local variability and account for the broad range of temperature regimes in different marine environments. For temperatures exceeding a 90th-percentile threshold beyond a period of 5-days, marine heatwaves can be classified into categories based on their intensity (Hobday et al., 2018). While these recent advances have provided the framework for understanding key aspects of marine heatwaves, a challenge lies ahead for effective integration of physical and biological knowledge for prediction of marine heatwaves and their ecological impacts. This Research Topic is motivated by the need to understand the mechanisms for how marine heatwaves develop and the biological responses to thermal stress events. This Research Topic is a collection of 18 research articles and three review articles aimed at advancing our knowledge of marine heatwaves within four themes. These themes include methods for detecting marine heatwaves, understanding their physical mechanisms, seasonal forecasting and climate projections, and ecological impacts.
    Description: We thank the contributing authors, reviewers, and the editorial staff at Frontiers in Marine Science for their support in producing this issue. We thank the Marine Heatwaves Working Group (http://www.marineheatwaves.org/) for inspiration and discussions. This special issue stemmed from the session on Advances in Understanding Marine Heat Waves and Their Impacts at the 2018 Ocean Sciences meeting (Portland, USA).
    Keywords: Marine heatwaves ; Extreme events ; Ocean and atmosphere interactions ; Marine ecosystems ; Marine resources ; Climate change ; Climate variability ; Climate prediction
    Repository Name: Woods Hole Open Access Server
    Type: Article
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