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  • 1
    ISSN: 1520-5835
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Oxford [u.a.] : International Union of Crystallography (IUCr)
    Acta crystallographica 56 (2000), S. 695-696 
    ISSN: 1600-5759
    Source: Crystallography Journals Online : IUCR Backfile Archive 1948-2001
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Benzyl N-[8-(4,4-dimethyl-5-oxo-4,5-dihydrooxazol-2-yl)-2,5,5,8-tetramethyl-3,6-dioxo-4,7-diazanon-2-yl]carbamate, C24H34N4O6, an oxazol-5(4H)-one from N-α-benzyloxycarbonyl-(Aib)4-OH (Aib = α-aminoisobutyryl) represents the longest peptide oxazolone so far characterized by X-ray diffraction. The overall geometry of the oxazolone ring compares well with literature data. The Aib(1) and Aib(2) residues are folded into a type III β-bend, while the conformation adopted by Aib(3), preceding the oxazolone moiety, is semi-extended. The disposition of the oxazolone ring relative to the preceding residue is stabilized by C—H...N and C—H...O intramolecular interactions.Alternative name: 4,4-dimethyl-2-[1-(phenylmethoxycarbonyl-2-methylalanyl-2-methylalanylamino)-1-methylethyl]oxazol-5(4H)-one.
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    International journal of peptide research and therapeutics 7 (2000), S. 123-131 
    ISSN: 1573-3904
    Keywords: 9-amino-9-fluorenecarboxylic acid ; conformational analysis ; fluorescence ; peptide synthesis ; X-ray diffraction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract We have synthesized by solution methods and fully characterizedtwo sets of terminally protected peptides based on the tricyclic Cα α-disubstituted glycine Afc. Theconformational preferences of the Afc/Gly peptides were examined by FT-IR absorption and 1H NMR techniques, whilethose of the Afc/TOAC peptides were primarily investigated by using fluorescence spectroscopy. The X-ray diffraction structure of an Afc derivative was also analyzed. The body of solution and crystal-state experimental data conclusively confirms previous findings that the Afc residue may either adopt the fully extended (C5) or a turn conformation.
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  • 4
    Electronic Resource
    Electronic Resource
    Springer
    International journal of peptide research and therapeutics 7 (2000), S. 123-131 
    ISSN: 1573-3904
    Keywords: 9-amino-9-fluorenecarboxylic acid ; conformational analysis ; fluorescence ; peptide synthesis ; X-ray diffraction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary We have synthesized by solution methods and fully characterized two sets of terminally protected peptides based on the tricyclic Cα,α-disubstituted glycine Afc. The conformational preferences of the Afc/Gly peptides were examined by FT-IR absorption and1H NMR techniques, while those of the Afc/TOAC peptides were primarily investigated by using fluorescence spectroscopy. The X-ray diffraction structure of an Afc derivative was also analyzed. The body of solution and crystal-state experimental data conclusively confirms previous findings that the Afc residue may either adopt the fully extended (C5) or a turn conformation.
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  • 5
    ISSN: 1573-3904
    Keywords: α-aminoisobutyric acid peptide ; chirality ; hydrophobicity ; isovaline peptide ; lipopeptaibol ; membrane activity ; peptide synthesis ; trikoningin
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary We synthesized by solution-phase methods the naturally occurring, 10-amino acid residue lipopeptaibol antibiotics trikoningins KBI and KBII, and the [l-Iva1] KB analogue, in which the amino acid in position 1 is different, with the aim at investigating the effect of hydrophobicity and chirality in that position. A solution conformational analysis, using FT-IR absorption and CD techniques, indicated that all of the three decapeptides are predominantly helical in a membrane-mimetic environment. Permeability measurements showed an increase of the activity from the [Aib1] peptide to the more hydrophobic [Iva1] peptides. Conversely, the effect of a change in chirality, obtained by replacingd-Iva1 withl-Iva, turned out to be of minor significance.
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  • 6
    ISSN: 1573-3904
    Keywords: α-aminoisobutyric acid peptide ; chirality ; hydrophobicity ; isovaline peptide ; lipopeptaibol ; membrane activity ; peptide synthesis ; trikoningin
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract We synthesized by solution-phase methods thenaturally occurring, 10-amino acid residuelipopeptaibol antibiotics trikoningins KBI and KBII,and the [L-Iva1] KB analogue, in which the aminoacid in position 1 is different, with the aim atinvestigating the effect of hydrophobicity andchirality in that position. A solution conformationalanalysis, using FT–IR absorption and CD techniques,indicated that all of the three decapeptides arepredominantly helical in a membrane-mimeticenvironment. Permeability measurements showed anincrease of the activity from the [Aib1] peptideto the more hydrophobic [Iva1] peptides.Conversely, the effect of a change in chirality,obtained by replacing D-Iva1 with L-Iva, turnedout to be of minor significance.
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  • 7
    ISSN: 0170-2041
    Keywords: Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Geometrie und Konformation des α-Aminoisobutyryl-Restes in einfachen Derivaten und Dipeptiden. Vier neue Röntgen-Struktur-Analysen und eine statistische Analyse mit bekannten KristalldatenDie Resultate der Röntgen-Strukturanalysen von zwei α-Aminoisobuttersäure(Aib)-Derivaten, N-Acetyl-α-aminoisobuttersäure-methylester (Ac-Aib-OMe, 1) und N-(Benzyloxycarbonyl)-α-aminoisobuttersäure-benzylester (Z-Aib-OBzl, 2) sowie von zwei terminal blockierten Aib enthaltenden Dipeptiden, N-Acetyl-L-alanyl-α-aminoisobuttersäure-methylester (Ac-L-Ala-Aib-OMe, 3) und N-(Benzyloxycarbonyl)-α-aminoisobutyryl-L-alanin-tert-butylester (Z-Aib-L-Ala-OtBu 4), werden beschrieben. In der asymmetrischen Zelle aller vier Verbindungen befinden sich zwei unabhängige Moleküle. In allen Fällen außer einem (Molekül A von 3) ist der Aib-Rest gefaltet, die Torsionswinkel Θ, ψ (oder Θ, ψτ) fallen in den Bereich der Konformationsenergiekarte, wo α- und 310-Helices liegen. Eine vergleichende statistische Analyse der Bindungslängen, Bindungswinkel und Torsionswinkel aus Kristallstrukturen von 20 Aib-Derivaten und 11 Aib enthaltenden linearen Dipeptiden wurde durchgeführt. Diese liefert genaue Information über die Geometrie und Konformation des Aib-Restes ohne den Einfluß der Restriktionen durch intramolekulare Wasserstoffbrücken, denen längere gefaltete oder helikale Peptide ausgesetzt sind.
    Notes: The results of X-ray diffraction analyses on two α-aminoisobutyric acid (Aib) derivatives, methyl α-(acetylamino)isobutanoate (Ac-Aib-OMe, 1) and benzyl α-[(benzyloxycarbonyl)amino]isobutanoate (Z-Aib-OBzl, 2), and two terminally blocked, Aib-containing dipeptides, methyl α-[(acetyl-L-alanyl)amino]isobutanoate (Ac-L-Ala-Aib-OMe, 3) and tert-butyl α-{[(benzyloxycarbonyl)amino]isobutanoyl}-L-alaninate (Z-Aib-L-Ala-OtBu, 4) are described. In the asymmetric unit of all four compounds two independent molecules were found. In all cases but one (molecule A of 3) the Aib residue is folded, the sets of Φ, ψ (or Φ, ψT) torsion angles falling in the region of the conformational energy map where both α- and 310-helices are found. A correlating statistical analysis of bond lengths, bond angles, and torsion angles from available crystal structures of 20 Aib derivatives and 11 Aib-containing linear dipeptides was also performed to obtain precise information on the geometry and conformation of the Aib residue without the influence of the constraints imposed by the intramolecular hydrogen bonds characterizing higher-order folded and helical peptides.
    Additional Material: 5 Ill.
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  • 8
    ISSN: 0170-2041
    Keywords: Tripeptides ; α-Aminoisobutyric acid ; Peptide antibiotics ; Chemistry ; Organic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Molekül- und Kristallstrukturen zweier terminal geschützter Tripeptide mit der Sequenz 3-5 der Antiamoebin-Peptaibol-AntibiotikaDie Molekül- und Kristallstrukturen der terminal geschützten Tripeptide α-[(Acetyl-α-aminoisobutanoyl-α-aminoisobutanoyl)-amino]iso-buttersäure-methylester-trihydrat [Ac-(Aib)3-OMe ⋅ 3 H2O, (1)] und α-[(Acetyl-α-aminoisobutanoyl-α-aminoisobutanoyl)amino]-(R)-sec-buttersäure-methylester-monohydrat [Ac-(Aib)2-(R)-Iva-OMe ⋅ H2O, (2)] mit den Sequenzen 3-5 der Antiamoebin-Peptaibol-Antibiotika wurden mittels Röntgen-Diffraktion bestimmt. Während das Peptid 1 in der üblichen β-Turn-Konformation vom Typ III (III′) gefaltet ist, bildet 2 einen für eine Aib-Aib-Sequenz ungewöhnlichen β-Turn vom Typ II. Laut Berechnung ist die Energie letzterer Struktur für ein isoliertes Molekül Ac-(Aib)2-(R)-Iva-OMe wesentlich höher (ΔE 〉 10 kcal/mol) als diejenige der energetisch günstigsten Konformation.
    Notes: The molecular and crystal structures of the terminally blocked tripeptides methyl α-[(acetyl-α-aminoisobutanoyl-α-aminoisobutanoyl)amino]isobutanoate trihydrate [Ac-(Aib)3-OMe ⋅ 3 H2O, (1)] and methyl α-[(acetyl-α-aminoisobutanoyl-α-aminoisobutanoyl)amino]-(R)-sec-butanoate monohydrate [Ac-(Aib)2-(R)-Iva-OMe ⋅ H2O, (2)], representing the 3-5 sequence of the peptaibol antibiotics antiamoebins, were determined by X-ray diffraction. While peptide 1 is folded in the common type-III (III′) β-bend conformation, peptide 2 forms a type-II β-bend, an unusual observation for an -Aib-Aib- sequence. A conformational energy computation analysis showed that the energy of this latter structure for an isolated Ac-(Aib)2-(R)-Iva-OMe molecule is significantly higher (ΔE 〉 10 kcal/mol) than that of the lowest-energy conformation.
    Additional Material: 5 Ill.
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  • 9
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The molecular and crystal structures of three monothiated analogues of the blocked L-Ala-Aib-L-Ala sequence of peptaibol antibiotics, t-Boc-L-Ala-Aib-ψ(CSNH)-L-Ala-OMe, Ac-L-Ala-Aib-ψ(CSNH)-L-Ala-OMe, and Ac-ψ(CSNH)-L-Ala-Aib-L-Ala-OMe, determined by x-ray diffraction analyses, are reported. In all cases the peptide chain is folded with ϕ,ψ angles close to or slightly distorted from those expected for a type II β-bend conformation. However, the 4 → 1 H-bond distance falls within the accepted limits only for Ac-L-Ala-Aib-ψ(CSNH)-L-Ala-OMe. The structures are compared with those already published for their two oxygenated analogues.
    Additional Material: 6 Ill.
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  • 10
    ISSN: 0006-3525
    Keywords: Chemistry ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have measured vibrational CD spectra in the 3600-1250 cm-1 region of two monodisperse, protected octapeptides, which form right-handed 310-helices in CDC13 solution. The spectra are similar in sign pattern to those obtained for right-handed α-helices in solution but are smaller in magnitude and, additionally, provide evidence of some line-shape differences. The delineation of this type of ordered conformation was accomplished by means of 1H-nmr. Such a solution structure is consistent with the x-ray crystal structure of one of these molecules.
    Additional Material: 3 Ill.
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