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  • 1
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    The mantle transition zone beneath West Antarctica: Seismic evidence for hydration and thermal upwellings (2014)
    Wiley
    Details
    Publication Date: 2014-11-27
    Description: Although prior work suggests that a mantle plume is associated with Cenozoic rifting and volcanism in West Antarctica, the existence of a plume remains conjectural. Here, we use P-wave receiver functions (PRFs) from the Antarctic POLENET array to estimate mantle transition zone thickness, which is sensitive to temperature perturbations, throughout previously unstudied parts of West Antarctica. We obtain over 8000 high-quality PRFs using an iterative, time-domain deconvolution method filtered with a Gaussian-width of 0.5 and 1.0, corresponding to frequencies less than ∼0.24 Hz and ∼0.48 Hz, respectively. Single-station and common conversion point stacks, migrated to depth using the AK135 velocity model, indicate that mantle transition zone thickness throughout most of West Antarctica does not differ significantly from the global average, except in two locations; one small region exhibits a vertically thinned (210±15km) transition zone beneath the Ruppert Coast of Marie Byrd Land and another laterally broader region shows slight, vertical thinning (225±25km) beneath the Bentley Subglacial Trench. We also observe the 520 discontinuity and a prominent negative peak above the mantle transition zone throughout much of West Antarctica. These results suggest that the mantle transition zone may be hotter than average in two places, possibly due to upwelling from the lower mantle, but not broadly across West Antarctica. Furthermore, we propose that the transition zone may be hydrated due to 〉100 million years of subduction beneath the region during the early Mesozoic. This article is protected by copyright. All rights reserved.
    Electronic ISSN: 1525-2027
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 2
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    Biochemistry. The evolution of ribozyme chemistry (2009)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2009-03-17
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wilson, Timothy J -- Lilley, David M J -- 11722/Cancer Research UK/United Kingdom -- B17092/Biotechnology and Biological Sciences Research Council/United Kingdom -- New York, N.Y. -- Science. 2009 Mar 13;323(5920):1436-8. doi: 10.1126/science.1169231.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Cancer Research UK Nucleic Acid Structure Research Group, MSI/WTB Complex, University of Dundee, Dow Street, Dundee DD1 5EH, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19286542" target="_blank"〉PubMed〈/a〉
    Keywords: Biocatalysis ; Catalytic Domain ; Directed Molecular Evolution ; *Evolution, Molecular ; Introns ; Ions ; Metals/chemistry ; Nucleic Acid Conformation ; Origin of Life ; RNA/chemistry/metabolism ; RNA Splicing ; RNA, Catalytic/*chemistry/*metabolism ; Ribosomes/metabolism ; Spliceosomes/chemistry/metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 3
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    Polar research: Six priorities for Antarctic science (2014)
    Nature Publishing Group (NPG)
    Details
    Publication Date: 2014-08-08
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kennicutt, Mahlon C 2nd -- Chown, Steven L -- Cassano, John J -- Liggett, Daniela -- Massom, Rob -- Peck, Lloyd S -- Rintoul, Steve R -- Storey, John W V -- Vaughan, David G -- Wilson, Terry J -- Sutherland, William J -- England -- Nature. 2014 Aug 7;512(7512):23-5. doi: 10.1038/512023a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Texas A&M University, College Station, Texas, USA, and past-president of the Scientific Committee on Antarctic Research. ; Monash University, Victoria, Australia. ; Cooperative Institute for Research in Environmental Sciences, Department of Atmospheric and Oceanic Sciences, University of Colorado, Boulder, Colorado, USA. ; Gateway Antarctica, University of Canterbury, Christchurch, New Zealand. ; Australian Antarctic Division, and Antarctic Climate and Ecosystems Cooperative Research Centre, Hobart, Australia. ; British Antarctic Survey, Cambridge, UK. ; Antarctic Climate and Ecosystems Cooperative Research Centre, Hobart, Tasmania, Australia. ; School of Physics, University of New South Wales, Sydney, Australia. ; School of Earth Sciences, Ohio State University, Columbus, Ohio, USA. ; Conservation Science Group, Department of Zoology, University of Cambridge, Cambridge, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25100467" target="_blank"〉PubMed〈/a〉
    Keywords: Antarctic Regions ; Astronomy ; Atmosphere/chemistry ; Biological Evolution ; Budgets ; *Climate Change ; Conservation of Natural Resources/methods ; Ecology ; Exobiology ; Ice Cover ; International Cooperation ; Oceans and Seas ; *Policy Making ; Research/economics/*trends
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Published by Nature Publishing Group (NPG)
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  • 4
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    Turbulence velocity profiling for high sensitivity and vertical-resolution atmospheric characterization with Stereo-SCIDAR (2016)
    Oxford University Press
    Details
    Publication Date: 2016-11-17
    Description: As telescopes become larger, into the era of ~40 m Extremely Large Telescopes, the high-resolution vertical profile of the optical turbulence strength is critical for the validation, optimization and operation of optical systems. The velocity of atmospheric optical turbulence is an important parameter for several applications including astronomical adaptive optics systems. Here, we compare the vertical profile of the velocity of the atmospheric wind above La Palma by means of a comparison of Stereo-SCIntillation Detection And Ranging (Stereo-SCIDAR) with the Global Forecast System models and nearby balloon-borne radiosondes. We use these data to validate the automated optical turbulence velocity identification from the Stereo-SCIDAR instrument mounted on the 2.5 m Isaac Newton Telescope, La Palma. By comparing these data we infer that the turbulence velocity and the wind velocity are consistent and that the automated turbulence velocity identification of the Stereo-SCIDAR is precise. The turbulence velocities can be used to increase the sensitivity of the turbulence strength profiles, as weaker turbulence that may be misinterpreted as noise can be detected with a velocity vector. The turbulence velocities can also be used to increase the altitude resolution of a detected layer, as the altitude of the velocity vectors can be identified to a greater precision than the native resolution of the system. We also show examples of complex velocity structure within a turbulent layer caused by wind shear at the interface of atmospheric zones.
    Print ISSN: 0035-8711
    Electronic ISSN: 1365-2966
    Topics: Physics
    Published by Oxford University Press
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  • 5
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    Chapter 2.8: Earth Structure and Geodynamics at the Poles (2011)
    In:  EPIC3Understanding Earth's Polar Challenges: International Polar Year 2007-2008, Summary by the IPY Joint Committee; University of the Arctic, Rovaniemi, Finland /CCI Press, Edmonton, Canada and ICSU/WMO Joint Committee for International Polar Year 20072008 /, ISBN: 978-1-896445-55-7
    Details
    Publication Date: 2019-07-17
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
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  • 6
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    Stress patterns observed by borehole televiewer logging of the CRP-3 drillhole, Victoria Land Basin, Antarctica (2001)
    PANGAEA
    In:  EPIC3Terra Antartica, Bremerhaven, PANGAEA, 8(3), pp. 197-204
    Details
    Publication Date: 2019-07-17
    Repository Name: EPIC Alfred Wegener Institut
    Type: PANGAEA Documentation , notRev
    Format: application/pdf
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  • 7
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    Neogene tectonic and climatic evolution of the Western Ross Sea, Antarctica — Chronology of events from the AND-1B drill hole (2012)
    Elsevier Science Limited
    Details
    Publication Date: 2022-06-14
    Description: Stratigraphic drilling from the McMurdo Ice Shelf in the 2006/2007 austral summer recovered a 1284.87 m sedimentary succession from beneath the sea floor. Key age data for the core include magnetic polarity stratigraphy for the entire succession, diatom biostratigraphy for the upper 600 m and 40Ar/39Ar ages for in-situ volcanic deposits as well as reworked volcanic clasts. A vertical seismic profile for the drill hole allows correlation between the drill hole and a regional seismic network and inference of age constraint by correlation with well‐dated regional volcanic events through direct recognition of interlayered volcanic deposits as well as by inference from flexural loading of pre‐existing strata. The combined age model implies relatively rapid (1 m/2–5 ky) accumulation of sediment punctuated by hiatuses, which account for approximately 50% of the record. Three of the longer hiatuses coincide with basin‐wide seismic reflectors and, along with two thick volcanic intervals, they subdivide the succession into seven chronostratigraphic intervals with characteristic facies: 1. The base of the cored succession (1275–1220 mbsf) comprises middle Miocene volcaniclastic sandstone dated at approx 13.5 Ma by several reworked volcanic clasts; 2. A late-Miocene sub-polar orbitally controlled glacial–interglacial succession (1220–760 mbsf) bounded by two unconformities correlated with basin‐wide reflectors associated with early development of the terror rift; 3. A late Miocene volcanigenic succession (760–596 mbsf) terminating with a ~1 my hiatus at 596.35 mbsf which spans the Miocene–Pliocene boundary and is not recognised in regional seismic data; 4. An early Pliocene obliquity-controlled alternating diamictite and diatomite glacial–interglacial succession(590–440 mbsf), separated from; 5. A late Pliocene obliquity-controlled alternating diamictite and diatomite glacial–interglacial succession (440–150 mbsf) by a 750 ky unconformity interpreted to represent a major sequence boundary at other locations; 6. An early Pleistocene interbedded volcanic, diamictite and diatomite succession (150–80 mbsf), and; 7. A late Pleistocene glacigene succession (80–0 mbsf) comprising diamictite dominated sedimentary cycles deposited in a polar environment.
    Description: Published
    Description: 189-203
    Description: 2.2. Laboratorio di paleomagnetismo
    Description: JCR Journal
    Description: restricted
    Keywords: Stratigraphic Drilling ; McMurdo Ice Shelf ; Chronostratigraphy ; Neogene ; Tectonics ; Ice Sheet history ; 02. Cryosphere::02.03. Ice cores::02.03.05. Paleoclimate ; 04. Solid Earth::04.04. Geology::04.04.10. Stratigraphy ; 04. Solid Earth::04.05. Geomagnetism::04.05.06. Paleomagnetism
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 8
    Electronic Resource
    Electronic Resource
    The rpfA gene of Xanthomonas campestris pathovar campestris, which is involved in the regulation of pathogenicity factor production, encodes an aconitase (1998)
    Oxford BSL : Blackwell Publishing Ltd
    Molecular microbiology 28 (1998), S. 0 
    Details
    ISSN: 1365-2958
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology , Medicine
    Notes: Xanthomonas campestris pv campestris (Xcc) is a plant pathogenic bacterium that controls the production of pathogenicity factors in part by a cluster of genes designated rpf (regulation of pathogenicity factors). Sequence analysis of one of these genes (rpfA) revealed an open reading frame with amino acid sequence similarity to aconitases from other bacteria. Aconitase activity was lower in cellular extracts of an rpfA::Tn5 mutant than in those from the wild type. A zymogram of aconitase activity after native gel electrophoresis showed the presence of two distinct aconitases in Xcc; the major aconitase was absent in the rpfA::Tn5 mutant. This mutant also had reduced levels of extracellular enzymes and extracellular polysaccharide (EPS). Supplying rpfA in trans to the rpfA::Tn5 mutant restored both the major aconitase activity and the synthesis of these pathogenicity factors. The transcription of the genes for two extracellular enzymes (prtA, encoding a serine protease, and engXCA, encoding endoglucanase) was reduced in the rpfA mutant background. Because some eukaryotic aconitases are also involved in iron regulation, we explored a possible connection between rpfA and iron metabolism. Intracellular iron levels in the mutants were lower than in the wild type as assessed by sensitivity to the iron-activated antibiotic, streptonigrin. Wild-type bacteria grown in iron-deficient conditions had a similar sensitivity to streptonigrin as the aconitase mutant. Overall, these results suggest that a prokaryotic aconitase can also act as a regulator of gene expression and that the regulation is possibly related to changes in intracellular iron levels.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1046/j.1365-2958.1998.00852.x
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  • 9
    Electronic Resource
    Electronic Resource
    A novel regulatory system required for pathogenicity of Xanthomonas campestris is mediated by a small diffusible signal molecule (1997)
    Oxford BSL : Blackwell Publishing Ltd
    Molecular microbiology 24 (1997), S. 0 
    Details
    ISSN: 1365-2958
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology , Medicine
    Notes: Mutations in the seven clustered rpf genes cause downregulated synthesis of extracellular enzymes and reduced virulence of Xanthomonas campestris pathovar campestris (Xcc). The phenotype of mutants in one of the genes, rpfF, can be restored by a diffusible extracellular factor (DSF) produced by all Xcc strains tested, apart from rpfF and rpfB mutants. DSF accumulates in early stationary phase (when synthesis of enzymes is maximal), but levels decline subsequently. Addition of DSF to exponentially-growing wild-type bacteria does not cause precocious enzyme synthesis. rpfB and rpfF are expressed throughout growth, but the rate increases in early stationary phase. RpfB is predicted to be a long-chain fatty acyl CoA ligase, and RpfF shows some relatedness to enoyl CoA hydratases. The properties of DSF suggest that it may be a fatty-acid derivative, and certain lipid preparations possess DSF activity at higher concentrations. These include lipid extracts and acid-hydrolysed lipopolysaccharide and lipid A from Xcc, and purified dodecanoic and hydroxydodecanoic acid. DSF production is confined to certain xanthomonads. We propose a model for the DSF system, which represents a novel mechanism for regulating virulence factor synthesis in response to physiological or environmental changes.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1046/j.1365-2958.1997.3721736.x
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  • 10
    Electronic Resource
    Electronic Resource
    Pathogenicity of Stagonospora nodorum requires malate synthase (2004)
    Oxford, UK : Blackwell Science Ltd
    Molecular microbiology 53 (2004), S. 0 
    Details
    ISSN: 1365-2958
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology , Medicine
    Notes: A gene encoding malate synthase, a key enzyme of the glyoxylate cycle, has been cloned and characterized in the necrotrophic wheat pathogen Stagonospora nodorum. Expression studies of Mls1 showed high levels of transcript in ungerminated spores whereas malate synthase enzyme activities were low. Expression studies in planta found that Mls1 transcript levels decreased ≈ 10-fold upon germination before slowly increasing throughout the remainder of the infection. To characterize Mls1 further, the gene was disrupted in S. nodorum by homologous recombination. In the absence of any supplied carbon source, the mls1 spores were unable to germinate and consequently the mutants were non-pathogenic. Germination and pathogenicity could be restored by the addition of either glucose or sucrose, implying that S. nodorum is reliant upon the catabolism of lipids for infection. Furthermore, analysis of lipid bodies in the mutant strain indicated that lipid mobilization and, consequently, peroxisomal β-oxidation of fatty acids is delayed or inhibited by the disruption of the glyoxylate cycle. This study has demonstrated for the first time in a fungal phytopathogen the requirement of malate synthase for pathogenicity, suggesting that gluconeogenesis is both dependent on the glyoxylate cycle and required for infection.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1111/j.1365-2958.2004.04178.x
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