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  • 1
    Publication Date: 2016-06-30
    Description: Seasonality of temperate forest photosynthesis and daytime respiration Nature 534, 7609 (2016). doi:10.1038/nature17966 Authors: R. Wehr, J. W. Munger, J. B. McManus, D. D. Nelson, M. S. Zahniser, E. A. Davidson, S. C. Wofsy & S. R. Saleska Terrestrial ecosystems currently offset one-quarter of anthropogenic carbon dioxide (CO2) emissions because of a slight imbalance between global terrestrial photosynthesis and respiration. Understanding what controls these two biological fluxes is therefore crucial to predicting climate change. Yet there is no way of directly measuring the photosynthesis or daytime respiration of a whole ecosystem of interacting organisms; instead, these fluxes are generally inferred from measurements of net ecosystem–atmosphere CO2 exchange (NEE), in a way that is based on assumed ecosystem-scale responses to the environment. The consequent view of temperate deciduous forests (an important CO2 sink) is that, first, ecosystem respiration is greater during the day than at night; and second, ecosystem photosynthetic light-use efficiency peaks after leaf expansion in spring and then declines, presumably because of leaf ageing or water stress. This view has underlain the development of terrestrial biosphere models used in climate prediction and of remote sensing indices of global biosphere productivity. Here, we use new isotopic instrumentation to determine ecosystem photosynthesis and daytime respiration in a temperate deciduous forest over a three-year period. We find that ecosystem respiration is lower during the day than at night—the first robust evidence of the inhibition of leaf respiration by light at the ecosystem scale. Because they do not capture this effect, standard approaches overestimate ecosystem photosynthesis and daytime respiration in the first half of the growing season at our site, and inaccurately portray ecosystem photosynthetic light-use efficiency. These findings revise our understanding of forest–atmosphere carbon exchange, and provide a basis for investigating how leaf-level physiological dynamics manifest at the canopy scale in other ecosystems.
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Published by Springer Nature
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  • 2
    Publication Date: 2003-12-04
    Description: The net ecosystem exchange of carbon dioxide was measured by eddy covariance methods for 3 years in two old-growth forest sites near Santarem, Brazil. Carbon was lost in the wet season and gained in the dry season, which was opposite to the seasonal cycles of both tree growth and model predictions. The 3-year average carbon loss was 1.3 (confidence interval: 0.0 to 2.0) megagrams of carbon per hectare per year. Biometric observations confirmed the net loss but imply that it is a transient effect of recent disturbance superimposed on long-term balance. Given that episodic disturbances are characteristic of old-growth forests, it is likely that carbon sequestration is lower than has been inferred from recent eddy covariance studies at undisturbed sites.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Saleska, Scott R -- Miller, Scott D -- Matross, Daniel M -- Goulden, Michael L -- Wofsy, Steven C -- da Rocha, Humberto R -- de Camargo, Plinio B -- Crill, Patrick -- Daube, Bruce C -- de Freitas, Helber C -- Hutyra, Lucy -- Keller, Michael -- Kirchhoff, Volker -- Menton, Mary -- Munger, J William -- Pyle, Elizabeth Hammond -- Rice, Amy H -- Silva, Hudson -- New York, N.Y. -- Science. 2003 Nov 28;302(5650):1554-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Earth and Planetary Sciences, Harvard University, Cambridge, MA 02138, USA. saleska@fas.harvard.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/14645845" target="_blank"〉PubMed〈/a〉
    Keywords: Brazil ; Carbon/*analysis/metabolism ; Carbon Dioxide/*analysis/metabolism ; Confidence Intervals ; *Ecosystem ; Oxygen Consumption ; Photosynthesis ; Rain ; *Seasons ; *Trees/growth & development/metabolism ; Wood
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 2001-11-27
    Description: Net uptake of carbon dioxide (CO2) measured by eddy covariance in a 60- to 80-year-old forest averaged 2.0 +/- 0.4 megagrams of carbon per hectare per year during 1993 to 2000, with interannual variations exceeding 50%. Biometry indicated storage of 1.6 +/- 0.4 megagrams of carbon per hectare per year over 8 years, 60% in live biomass and the balance in coarse woody debris and soils, confirming eddy-covariance results. Weather and seasonal climate (e.g., variations in growing-season length or cloudiness) regulated seasonal and interannual fluctuations of carbon uptake. Legacies of prior disturbance and management, especially stand age and composition, controlled carbon uptake on the decadal time scale, implying that eastern forests could be managed for sequestration of carbon.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Barford, C C -- Wofsy, S C -- Goulden, M L -- Munger, J W -- Pyle, E H -- Urbanski, S P -- Hutyra, L -- Saleska, S R -- Fitzjarrald, D -- Moore, K -- New York, N.Y. -- Science. 2001 Nov 23;294(5547):1688-91.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Division of Engineering and Applied Science and Department of Earth and Planetary Science, Harvard University, Cambridge, MA 02138, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11721047" target="_blank"〉PubMed〈/a〉
    Keywords: Algorithms ; *Atmosphere/analysis ; Biomass ; Biometry ; Carbon/metabolism ; Carbon Dioxide/*metabolism ; Climate ; *Ecosystem ; New England ; Nitrogen/analysis ; Probability ; Seasons ; Soil/analysis ; Time Factors ; Trees/growth & development/*metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 4
    Publication Date: 2014-10-25
    Description: Permafrost contains about 50% of the global soil carbon. It is thought that the thawing of permafrost can lead to a loss of soil carbon in the form of methane and carbon dioxide emissions. The magnitude of the resulting positive climate feedback of such greenhouse gas emissions is still unknown and may to a large extent depend on the poorly understood role of microbial community composition in regulating the metabolic processes that drive such ecosystem-scale greenhouse gas fluxes. Here we show that changes in vegetation and increasing methane emissions with permafrost thaw are associated with a switch from hydrogenotrophic to partly acetoclastic methanogenesis, resulting in a large shift in the delta(13)C signature (10-15 per thousand) of emitted methane. We used a natural landscape gradient of permafrost thaw in northern Sweden as a model to investigate the role of microbial communities in regulating methane cycling, and to test whether a knowledge of community dynamics could improve predictions of carbon emissions under loss of permafrost. Abundance of the methanogen Candidatus 'Methanoflorens stordalenmirensis' is a key predictor of the shifts in methane isotopes, which in turn predicts the proportions of carbon emitted as methane and as carbon dioxide, an important factor for simulating the climate feedback associated with permafrost thaw in global models. By showing that the abundance of key microbial lineages can be used to predict atmospherically relevant patterns in methane isotopes and the proportion of carbon metabolized to methane during permafrost thaw, we establish a basis for scaling changing microbial communities to ecosystem isotope dynamics. Our findings indicate that microbial ecology may be important in ecosystem-scale responses to global change.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉McCalley, Carmody K -- Woodcroft, Ben J -- Hodgkins, Suzanne B -- Wehr, Richard A -- Kim, Eun-Hae -- Mondav, Rhiannon -- Crill, Patrick M -- Chanton, Jeffrey P -- Rich, Virginia I -- Tyson, Gene W -- Saleska, Scott R -- England -- Nature. 2014 Oct 23;514(7523):478-81. doi: 10.1038/nature13798.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona 85721, USA. ; Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, University of Queensland, Brisbane 4072, Queensland, Australia. ; Department of Earth, Ocean and Atmospheric Science, Florida State University, Tallahassee, Florida 32306, USA. ; Department of Soil, Water and Environmental Science, University of Arizona, Tucson, Arizona 85721, USA. ; Department of Geological Sciences, Stockholm University, Stockholm 106 91, Sweden.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25341787" target="_blank"〉PubMed〈/a〉
    Keywords: Anaerobiosis ; Arctic Regions ; Atmosphere/*chemistry ; Carbon Dioxide/metabolism ; *Ecosystem ; *Freezing ; Methane/analysis/*metabolism ; *Soil Microbiology ; Sweden
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 5
    Publication Date: 2007-09-22
    Description: Coupled climate-carbon cycle models suggest that Amazon forests are vulnerable to both long- and short-term droughts, but satellite observations showed a large-scale photosynthetic green-up in intact evergreen forests of the Amazon in response to a short, intense drought in 2005. These findings suggest that Amazon forests, although threatened by human-caused deforestation and fire and possibly by more severe long-term droughts, may be more resilient to climate changes than ecosystem models assume.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Saleska, Scott R -- Didan, Kamel -- Huete, Alfredo R -- da Rocha, Humberto R -- New York, N.Y. -- Science. 2007 Oct 26;318(5850):612. Epub 2007 Sep 20.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA. saleska@email.arizona.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/17885095" target="_blank"〉PubMed〈/a〉
    Keywords: Bolivia ; Brazil ; *Disasters ; *Ecosystem ; Peru ; *Photosynthesis ; Plant Leaves/metabolism ; *Rain ; Seasons ; *Trees/metabolism ; *Tropical Climate
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
    Publication Date: 2016-02-27
    Description: In evergreen tropical forests, the extent, magnitude, and controls on photosynthetic seasonality are poorly resolved and inadequately represented in Earth system models. Combining camera observations with ecosystem carbon dioxide fluxes at forests across rainfall gradients in Amazonia, we show that aggregate canopy phenology, not seasonality of climate drivers, is the primary cause of photosynthetic seasonality in these forests. Specifically, synchronization of new leaf growth with dry season litterfall shifts canopy composition toward younger, more light-use efficient leaves, explaining large seasonal increases (~27%) in ecosystem photosynthesis. Coordinated leaf development and demography thus reconcile seemingly disparate observations at different scales and indicate that accounting for leaf-level phenology is critical for accurately simulating ecosystem-scale responses to climate change.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wu, Jin -- Albert, Loren P -- Lopes, Aline P -- Restrepo-Coupe, Natalia -- Hayek, Matthew -- Wiedemann, Kenia T -- Guan, Kaiyu -- Stark, Scott C -- Christoffersen, Bradley -- Prohaska, Neill -- Tavares, Julia V -- Marostica, Suelen -- Kobayashi, Hideki -- Ferreira, Mauricio L -- Campos, Kleber Silva -- da Silva, Rodrigo -- Brando, Paulo M -- Dye, Dennis G -- Huxman, Travis E -- Huete, Alfredo R -- Nelson, Bruce W -- Saleska, Scott R -- New York, N.Y. -- Science. 2016 Feb 26;351(6276):972-6. doi: 10.1126/science.aad5068.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA. jinwu@email.arizona.edu saleska@email.arizona.edu. ; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA. ; Brazil's National Institute for Amazon Research (INPA), Manaus, Amazonas, Brazil. ; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA. Plant Functional Biology and Climate Change Cluster, University of Technology Sydney, Sydney, NSW, Australia. ; John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA. ; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA. John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA 02138, USA. ; Department of Natural Resources and Environmental Science, University of Illinois at Urbana Champaign, Urbana, IL 61081, USA. Department of Earth System Science, Stanford University, Stanford, CA 94025, USA. ; Department of Forestry, Michigan State University, East Lansing, MI 48824, USA. ; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA. Earth and Environmental Sciences Division, Los Alamos National Lab, Los Alamos, NM 87545, USA. ; Department of Environmental Geochemical Cycle Research, Japan Agency for Marine-Earth Science and Technology, Yokohama, Japan. ; Centro de Energia Nuclear na Agricultura, University of Sao Paulo, Piracicaba, SP, Brazil. Smart and Intelligent Cities Programme, University Nove de Julho, Sao Paulo, SP, Brazil. ; Department of Environmental Physics, University of Western Para (UFOPA), Santarem, Para, Brazil. ; Instituto de Pesquisa Ambiental da Amazonia (IPAM), Belem, Para, Brazil. Woods Hole Research Center, Falmouth, MA 02450, USA. ; Western Geographic Science Center, U.S. Geological Survey, Flagstaff, AZ 86001, USA. ; Ecology and Evolutionary Biology and Center for Environmental Biology, University of California, Irvine, CA 92629, USA. ; Plant Functional Biology and Climate Change Cluster, University of Technology Sydney, Sydney, NSW, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26917771" target="_blank"〉PubMed〈/a〉
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 7
    Publication Date: 2016-03-18
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Saleska, Scott R -- Wu, Jin -- Guan, Kaiyu -- Araujo, Alessandro C -- Huete, Alfredo -- Nobre, Antonio D -- Restrepo-Coupe, Natalia -- England -- Nature. 2016 Mar 17;531(7594):E4-5. doi: 10.1038/nature16457.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona 85721, USA. ; Environmental and Earth System Science, Stanford University, Stanford, California 94305, USA. ; Embrapa Amazonia Oriental, Belem, Brazil. ; Plant Functional Biology and Climate Change Cluster, University of Technology Sydney, Sydney, New South Wales 2007, Australia. ; National Institute for Space Research (INPE) and National Institute for Amazonian Research (INPA), Sao Jose dos Campos, Brazil.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26983544" target="_blank"〉PubMed〈/a〉
    Keywords: *Droughts ; Pigmentation/*physiology ; Plant Leaves/*physiology ; *Seasons ; *Sunlight ; Trees/*physiology ; *Tropical Climate
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 8
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  • 10
    Publication Date: 2011-11-30
    Description: We used eddy covariance and ecological measurements to investigate the effects of reduced impact logging (RIL) on an old-growth Amazonian forest. Logging caused small decreases in gross primary production, leaf production, and latent heat flux, which were roughly proportional to canopy loss, and increases in heterotrophic respiration, tree mortality, and wood production. The net effect of RIL was transient, and treatment effects were barely discernable after only 1 y. RIL appears to provide a strategy for managing tropical forest that minimizes the potential risks to climate associated with large changes in carbon and water exchange.
    Keywords: Sustainability Science
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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