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  • 1
    Publication Date: 2007-01-20
    Description: Cells both actively generate and sensitively react to forces through their mechanical framework, the cytoskeleton, which is a nonequilibrium composite material including polymers and motor proteins. We measured the dynamics and mechanical properties of a simple three-component model system consisting of myosin II, actin filaments, and cross-linkers. In this system, stresses arising from motor activity controlled the cytoskeletal network mechanics, increasing stiffness by a factor of nearly 100 and qualitatively changing the viscoelastic response of the network in an adenosine triphosphate-dependent manner. We present a quantitative theoretical model connecting the large-scale properties of this active gel to molecular force generation.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Mizuno, Daisuke -- Tardin, Catherine -- Schmidt, C F -- Mackintosh, F C -- New York, N.Y. -- Science. 2007 Jan 19;315(5810):370-3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Physics and Astronomy, Vrije Universiteit, 1081HV Amsterdam, Netherlands.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/17234946" target="_blank"〉PubMed〈/a〉
    Keywords: Actin Cytoskeleton/*physiology ; Actins/*physiology ; Adenosine Triphosphate/*metabolism ; Biomechanical Phenomena ; Cytoskeleton/*physiology ; Elasticity ; Mathematics ; *Models, Biological ; Molecular Motor Proteins/*physiology ; Myosin Type II/*physiology ; Rheology ; Stress, Mechanical ; Viscosity
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2004-05-29
    Description: Networks of cross-linked and bundled actin filaments are ubiquitous in the cellular cytoskeleton, but their elasticity remains poorly understood. We show that these networks exhibit exceptional elastic behavior that reflects the mechanical properties of individual filaments. There are two distinct regimes of elasticity, one reflecting bending of single filaments and a second reflecting stretching of entropic fluctuations of filament length. The mechanical stiffness can vary by several decades with small changes in cross-link concentration, and can increase markedly upon application of external stress. We parameterize the full range of behavior in a state diagram and elucidate its origin with a robust model.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gardel, M L -- Shin, J H -- MacKintosh, F C -- Mahadevan, L -- Matsudaira, P -- Weitz, D A -- GM52703/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2004 May 28;304(5675):1301-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Physics, Harvard University, Cambridge, MA 02138, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/15166374" target="_blank"〉PubMed〈/a〉
    Keywords: Actin Cytoskeleton/*chemistry/metabolism ; Actins/*chemistry/metabolism ; Biopolymers/chemistry/metabolism ; Elasticity ; Entropy ; Mathematics ; Microfilament Proteins/chemistry/metabolism ; Models, Biological ; Stress, Mechanical
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 2014-05-31
    Description: Cells are active systems with molecular force generation that drives complex dynamics at the supramolecular scale. We present a quantitative study of molecular motions in cells over times from milliseconds to hours. Noninvasive tracking was accomplished by imaging highly stable near-infrared luminescence of single-walled carbon nanotubes targeted to kinesin-1 motor proteins in COS-7 cells. We observed a regime of active random "stirring" that constitutes an intermediate mode of transport, different from both thermal diffusion and directed motor activity. High-frequency motion was found to be thermally driven. At times greater than 100 milliseconds, nonequilibrium dynamics dominated. In addition to directed transport along microtubules, we observed strong random dynamics driven by myosins that result in enhanced nonspecific transport. We present a quantitative model connecting molecular mechanisms to mesoscopic fluctuations.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Fakhri, Nikta -- Wessel, Alok D -- Willms, Charlotte -- Pasquali, Matteo -- Klopfenstein, Dieter R -- MacKintosh, Frederick C -- Schmidt, Christoph F -- New York, N.Y. -- Science. 2014 May 30;344(6187):1031-5. doi: 10.1126/science.1250170.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Drittes Physikalisches Institut-Biophysik, Georg-August-Universitat, 37077 Gottingen, Germany. ; Department of Chemical and Biomolecular Engineering, Department of Chemistry, Smalley Institute for Nanoscale Science and Technology, Rice University, Houston, TX 77005, USA. ; Department of Physics and Astronomy, Vrije Universiteit, 1081 HV Amsterdam, Netherlands. christoph.schmidt@phys.uni-goettingen.de fcmack@gmail.com. ; Drittes Physikalisches Institut-Biophysik, Georg-August-Universitat, 37077 Gottingen, Germany. christoph.schmidt@phys.uni-goettingen.de fcmack@gmail.com.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/24876498" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; COS Cells ; Cell Tracking/*methods ; Cercopithecus aethiops ; Kinesin/chemistry/metabolism ; Microtubules/metabolism ; Models, Biological ; Molecular Motor Proteins/chemistry/*metabolism ; Motion ; Myosins/chemistry/metabolism ; *Nanotubes, Carbon
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 4
    Publication Date: 2011-01-06
    Description: The thermal motion of stiff filaments in a crowded environment is highly constrained and anisotropic; it underlies the behavior of such disparate systems as polymer materials, nanocomposites, and the cell cytoskeleton. Despite decades of theoretical study, the fundamental dynamics of such systems remains a mystery. Using near-infrared video microscopy, we studied the thermal diffusion of individual single-walled carbon nanotubes (SWNTs) confined in porous agarose networks. We found that even a small bending flexibility of SWNTs strongly enhances their motion: The rotational diffusion constant is proportional to the filament-bending compliance and is independent of the network pore size. The interplay between crowding and thermal bending implies that the notion of a filament's stiffness depends on its confinement. Moreover, the mobility of SWNTs and other inclusions can be controlled by tailoring their stiffness.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Fakhri, Nikta -- MacKintosh, Frederick C -- Lounis, Brahim -- Cognet, Laurent -- Pasquali, Matteo -- New York, N.Y. -- Science. 2010 Dec 24;330(6012):1804-7. doi: 10.1126/science.1197321.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Chemical and Biomolecular Engineering, Smalley Institute for Nanoscale Science and Technology, Rice University, Houston, TX 77005, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21205665" target="_blank"〉PubMed〈/a〉
    Keywords: Diffusion ; Microscopy, Video ; Nanotubes, Carbon/*chemistry ; Physicochemical Phenomena ; Polymers/chemistry ; Sepharose ; Temperature
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 5
    Publication Date: 2016-04-30
    Description: Systems in thermodynamic equilibrium are not only characterized by time-independent macroscopic properties, but also satisfy the principle of detailed balance in the transitions between microscopic configurations. Living systems function out of equilibrium and are characterized by directed fluxes through chemical states, which violate detailed balance at the molecular scale. Here we introduce a method to probe for broken detailed balance and demonstrate how such nonequilibrium dynamics are manifest at the mesosopic scale. The periodic beating of an isolated flagellum from Chlamydomonas reinhardtii exhibits probability flux in the phase space of shapes. With a model, we show how the breaking of detailed balance can also be quantified in stationary, nonequilibrium stochastic systems in the absence of periodic motion. We further demonstrate such broken detailed balance in the nonperiodic fluctuations of primary cilia of epithelial cells. Our analysis provides a general tool to identify nonequilibrium dynamics in cells and tissues.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Battle, Christopher -- Broedersz, Chase P -- Fakhri, Nikta -- Geyer, Veikko F -- Howard, Jonathon -- Schmidt, Christoph F -- MacKintosh, Fred C -- P50GM068763/GM/NIGMS NIH HHS/ -- R13GM085967/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2016 Apr 29;352(6285):604-7. doi: 10.1126/science.aac8167.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Drittes Physikalisches Institut, Georg-August-Universitat, 37077 Gottingen, Germany. The Kavli Institute for Theoretical Physics, University of California, Santa Barbara, CA 93106, USA. ; The Kavli Institute for Theoretical Physics, University of California, Santa Barbara, CA 93106, USA. Arnold-Sommerfeld-Center for Theoretical Physics and Center for NanoScience, Ludwig-Maximilians-Universitat Munchen, Theresienstrasse 37, D-80333 Munchen, Germany. Lewis-Sigler Institute for Integrative Genomics and Joseph Henry Laboratories of Physics, Princeton University, Princeton, NJ 08544, USA. ; Drittes Physikalisches Institut, Georg-August-Universitat, 37077 Gottingen, Germany. The Kavli Institute for Theoretical Physics, University of California, Santa Barbara, CA 93106, USA. Department of Physics, Massachusetts Institute of Technology, Cambridge, MA 02139, USA. ; Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA. ; Drittes Physikalisches Institut, Georg-August-Universitat, 37077 Gottingen, Germany. The Kavli Institute for Theoretical Physics, University of California, Santa Barbara, CA 93106, USA. fcmack@gmail.com christoph.schmidt@phys.uni-goettingen.de. ; The Kavli Institute for Theoretical Physics, University of California, Santa Barbara, CA 93106, USA. Department of Physics and Astronomy, Vrije Universiteit, Amsterdam, Netherlands. fcmack@gmail.com christoph.schmidt@phys.uni-goettingen.de.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27126047" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Chlamydomonas reinhardtii/*physiology ; Cilia/physiology ; Dogs ; Epithelial Cells/physiology ; Flagella/*physiology ; Madin Darby Canine Kidney Cells ; Microscopy/methods ; Models, Biological ; *Motion ; Thermodynamics
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Langmuir 11 (1995), S. 2471-2475 
    ISSN: 1520-5827
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Macromolecules 27 (1994), S. 7677-7680 
    ISSN: 1520-5835
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Physics
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  • 8
    Electronic Resource
    Electronic Resource
    [s.l.] : Macmillan Magazines Ltd.
    Nature 399 (1999), S. 566-569 
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] From seashells to DNA, chirality is expressed at every level of biological structures. In self-assembled structures it may emerge cooperatively from chirality at the molecular scale. Amphiphilic molecules, for example, can form a variety of aggregates and mesophases that express the chirality ...
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  • 9
    Electronic Resource
    Electronic Resource
    [s.l.] : Macmillian Magazines Ltd.
    Nature 435 (2005), S. 191-194 
    ISSN: 1476-4687
    Source: Nature Archives 1869 - 2009
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
    Notes: [Auszug] The mechanical properties of soft biological tissues are essential to their physiological function and cannot easily be duplicated by synthetic materials. Unlike simple polymer gels, many biological materials—including blood vessels, mesentery tissue, lung parenchyma, cornea and blood ...
    Type of Medium: Electronic Resource
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  • 10
    Publication Date: 2011-05-18
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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