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  • 1
    Electronic Resource
    Electronic Resource
    Regeneration potential of CIMMYT durum wheat and triticale varieties from immature embryos (2001)
    Oxford, UK : Blackwell Publishing Ltd
    Plant breeding 120 (2001), S. 0 
    Details
    ISSN: 1439-0523
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Twenty-five durum wheat elite advanced lines and released varieties, and five triticale varieties were evaluated for their ability to produce embryogenic callus using three different media. For callus initiation and maintenance there were basal Murashige and Skoog (MS) medium containing double strains of macroelements and 2.5 mg/l 2,4D (DW1), basal MS medium containing 2.0 mg/l 2,4D (DW2), or basal MS medium supplemented with 1.0 mg/l 2,4 D and coconut milk (DW3). Plant regeneration was achieved on basal MS medium with indoleacetic acid and 6-benzylaminopurine, and plants rooted on MS with 1-naphthale-neacetic acid. DW3 medium proved better than the other media tested for embryogenic callus initiation and maintenance. Regeneration rates varied widely with both genotype and initiation medium, with values ranging from no regeneration to 100% regeneration; the plantlets produced per embryo ranged from five to 20. Fourteen of the durum wheat genotypes showed 63–100% regeneration from DW3 callus formation medium, four lines from DW1 medium, and two lines from DW2. Four of the triticale varieties had regeneration of 48–100% from DW3 medium. After six subcultures, over a 6-month period, genotypes lost their ability to regenerate plants. Only 10 lines retained some plant regeneration potential but regeneration was at reduced levels. Successful regeneration of durum wheat and triticale varieties will be used as an integral part of the transformation process.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1046/j.1439-0523.2001.00518.x
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  • 2
    Electronic Resource
    Electronic Resource
    Heterosis among populations of maize (Zea mays L.) with different levels of exotic germplasm (1987)
    Springer
    Theoretical and applied genetics 73 (1987), S. 445-450 
    Details
    ISSN: 1432-2242
    Keywords: Unadapted germplasm ; Adapted germplasm ; Heterotic patterns ; Gardner-Eberhart model ; Composites
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Thirteen maize (Zea mays L.) populations including five adapted, five adapted x exotic, two composites of adapted and exotic, and one exotic selected for adaptability were crossed in a diallel mating system. The parents and 78 crosses and nine check hybrids were evaluated for grain yield and plant height in five environments. The Gardner-Eberhart model Analysis II indicated that additive and nonadditive gene effects accounted for 60 and 40% of the total variation among populations, respectively, for grain yield and 86% and 14% of the total variation, respectively, for plant height. Components of heterosis were significant in the combined analysis for both traits. Adapted Corn Belt populations tended to have higher performance in crosses and greater values of variety heterosis than 50% adapted populations. ‘Nebraska Elite Composite’, ‘Corn Belt’ x ‘Mexican’, and ‘Corn Belt’ x ‘Brazilian’ showed high mean yields in crosses, however, they were not among those with high estimates of variety heterosis. One exotic population (‘Tuxpeno’ x ‘Antigua Grupo 2’) and three adapted populations [‘307 Composite’, ‘NB(S1)C-3’, and ‘NK(S1)C-3’] might be combined together to form a high-yielding population. It may be possible to synthesize two useful populations for reciprocal recurrent selection by grouping ‘Tuxpeno’ x ‘Antiqua Grupo 2’, ‘NB(S1)C-3’, and ‘NS(FS)LFW-8’ into one population and ‘NK(S1)C-3’, ‘Krug’x‘Tabloncillo’, and ‘307 Composite’ in the other one.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00262514
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  • 3
    Electronic Resource
    Electronic Resource
    Methodologies for estimating the sample size required for genetic conservation of outbreeding crops (1989)
    Springer
    Theoretical and applied genetics 77 (1989), S. 153-161 
    Details
    ISSN: 1432-2242
    Keywords: Seed regeneration ; Sample size ; Random genetic drift ; Effective population size ; Allele frequency
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The main purpose of germplasm banks is to preserve the genetic variability existing in crop species. The effectiveness of the regeneration of collections stored in gene banks is affected by factors such as sample size, random genetic drift, and seed viability. The objective of this paper is to review probability models and population genetics theory to determine the choice of sample size used for seed regeneration. A number of conclusions can be drawn from the results. First, the size of the sample depends largely on the frequency of the least common allele or genotype. Genotypes or alleles occurring at frequencies of more than 10% can be preserved with a sample size of 40 individuals. A sample size of 100 individuals will preserve genotypes (alleles) that occur at frequencies of 5%. If the frequency of rare genotypes (alleles) drops below 5%, larger sample sizes are required. A second conclusion is that for two, three, and four alleles per locus the sample size required to include a copy of each allele depends more on the frequency of the rare allele or alleles than on the number. Samples of 300 to 400 are required to preserve alleles that are present at a frequency of 1%. Third, if seed is bulked, the expected number of parents involved in any sample drawn from the bulk will be less than the number of parents included in the bulk. Fourth, to maintain a rate of breeding (F) of 1 %, the effective population size (N e) should be at least 150 for three alleles, and 300 for four alleles. Fifth, equalizing the reproductive output of each family to two progeny doubles the effective size of the population. Based on the results presented here, a practical option is considered for regenerating maize seed in a program constrained by limited funds.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00266180
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  • 4
    Electronic Resource
    Electronic Resource
    A shifted multiplicative model cluster analysis for grouping environments without genotypic rank change (1993)
    Springer
    Theoretical and applied genetics 85 (1993), S. 577-586 
    Details
    ISSN: 1432-2242
    Keywords: Genotype-environment interaction ; Crossover interaction ; Separability ; Shifted multiplicative model ; Distance measure ; Cluster analysis ; Zea mays L
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The shifted multiplicative model (SHMM) is used with a cluster method to identify subsets of sites in an international maize (Zea mays L.) trial without genotypic rank-change. For cluster analysis, distance between two sites is defined as the residual sum of squares after fitting SHMM with one multiplicative term (SHMM1) if SHMM1 does not show genotypic rank-change. However, if SHMM1 does show genotypic rank-change, the distance between two sites is defined as the smaller of the sums of squares owing to genotypes within each of the two sites. Calculation of distance between two sites is facilitated by using the site regression model with one multiplicative term (SREG1), which can be reparameterized as SHMM1 when only two sites are considered. The dichotomous splitting procedure, used on the dendrogram obtained from cluster analysis, will first perform SHMM analyses on each of the last two cluster groups to join (end of the dendrogram). If SHMM1 does not give an adequate fit, the next step is to move down the branches of the tree until groups of sites (clusters) are found to which SHMM1 provides an adequate fit and primary effects of sites are all of the same sign. Five final groups of sites to which SHMM1 provides an adequate fit and primary effects of sites are all of the same sign were obtained. The procedure appears to be useful in identifying subsets of sites in which genotypic rank-change interactions are negligible.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00220916
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  • 5
    Electronic Resource
    Electronic Resource
    Statistical genetic considerations for maintaining germ plasm collections (1993)
    Springer
    Theoretical and applied genetics 86 (1993), S. 673-678 
    Details
    ISSN: 1432-2242
    Keywords: Genetic resources conservation ; Sample size ; Allele frequency ; Probability models ; Core subsets
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract One objective of the regeneration of genetic populations is to maintain at least one copy of each allele present in the original population. Genetic diversity within populations depends on the number and frequency of alleles across all loci. The objectives of this study on outbreeding crops are: (1) to use probability models to determine optimal sample sizes for the regeneration for a number of alleles at independent loci; and (2) to examine theoretical considerations in choosing core subsets of a collection. If we assume that k-1 alleles occur at an identical low frequency of p0 and that the kth allele occurs at a frequency of 1-[(k-1)p0], for loci with two, three, or four alleles, each with a p0 of 0.05, 89–110 additional individuals are required if at least one allele at each of 10 loci is to be retained with a 90% probability; if 100 loci are involved, 134–155 individuals are required. For two, three, or four alleles, when p0 is 0.03 at each of 10 loci, the sample size required to include at least one of the alleles from each class in each locus is 150–186 individuals; if 100 loci are involved, 75 additional individuals are required. Sample sizes of 160–210 plants are required to capture alleles at frequencies of 0.05 or higher in each of 150 loci, with a 90–95% probability. For rare alleles widespread throughout the collection, most alleles with frequencies of 0.03 and 0.05 per locus will be included in a core subset of 25–100 accessions.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00222655
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  • 6
    Electronic Resource
    Electronic Resource
    Interpreting genotype × environment interaction in tropical maize using linked molecular markers and environmental covariables (1999)
    Springer
    Theoretical and applied genetics 99 (1999), S. 611-625 
    Details
    ISSN: 1432-2242
    Keywords: Key words Biplot ; Factorial regression ; Genetic marker ; Genotype×environment interaction ; Quantitative trait loci ; Quantitative trait loci × environment interaction ; Partial least squares regression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  An understanding of the genetic and environmental basis of genotype×environment interaction (GEI) is of fundamental importance in plant breeding. In mapping quantitative trait loci (QTLs), suitable genetic populations are grown in different environments causing QTLs×environment interaction (QEI). The main objective of the present study is to show how Partial Least Squares (PLS) regression and Factorial Regression (FR) models using genetic markers and environmental covariables can be used for studying QEI related to GEI. Biomass data were analyzed from a multi-environment trial consisting of 161 lines from a F3:4 maize segregating population originally created with the purpose of mapping QTLs loci and investigating adaptation differences between highland and lowland tropical maize. PLS and FR methods detected 30 genetic markers (out of 86) that explained a sizeable proportion of the interaction of maize lines over four contrasting environments involving two low-altitude sites, one intermediate-altitude site, and one high-altitude site for biomass production. Based on a previous study, most of the 30 markers were associated with QTLs for biomass and exhibited significant QEI. It was found that marker loci in lines with positive GEI for the highland environments contained more highland alleles, whereas marker loci in lines with positive GEI for intermediate and lowland environments contained more lowland alleles. In addition, PLS and FR models identified maximum temperature as the most-important environmental covariable for GEI. Using a stepwise variable selection procedure, a FR model was constructed for GEI and QEI that exclusively included cross products between genetic markers and environmental covariables. Higher maximum temperature in low- and intermediate-altitude sites affected the expression of some QTLs, while minimum temperature affected the expression of other QTLs.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220051276
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  • 7
    Electronic Resource
    Electronic Resource
    A comparison of results obtained with two methods for assessing yield stability (1988)
    Springer
    Theoretical and applied genetics 75 (1988), S. 460-467 
    Details
    ISSN: 1432-2242
    Keywords: Zea mays L. ; Selection ; Regression analysis ; Principal coordinates analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary A major objective of the CIMMYT Maize Program is to develop open-pollinated varieties of maize (Zea mays L.) that are well adapted to a wide range of environments. To achieve this breeding goal, it is essential that the program use a stability technique that will identify high-yielding, stable genotypes accurately in international trials conducted under different environmental conditions. The objective of this study was to compare a spatial method with a modified conventional regression analysis method to determine the yield stability of 27 CIMMYT maize varieties evaluated at 37 locations. The methods also were compared on the basis of their consistency in assessing the stability of varieties when certain locations were omitted, and when subsets of varieties were analyzed. The varieties found to be stable by the spatial method with all sites included in the analysis were also stable (1) when the lowest and highest yielding sites were excluded from the analyses, and (2) when the varieties were considered, along with others, as a subset of the original group of materials. Stability parameters determined by regression analysis, however, varied for some varieties when (1) extreme sites were excluded, and (2) a subset of entries was considered in isolation. Because the spatial method was more consistent in identifying high-yielding stable varieties, it was considered the more useful of the two methods.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00276750
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  • 8
    Electronic Resource
    Electronic Resource
    Predicted and realized grain yield responses to full-sib family selection in CIMMYT maize (Zea mays L.) populations (1989)
    Springer
    Theoretical and applied genetics 77 (1989), S. 33-38 
    Details
    ISSN: 1432-2242
    Keywords: Multilocational progeny trials ; Full-sib selection ; Variance components ; Selection response
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The maize (Zea mays L.) improvement program of the International Maize and Wheat Improvement Center (CIMMYT) develops broad-based maize populations and, until recently, improved all of them through full-sib family selection with international testing. The purpose of this study was to estimate the genetic and genetic × environment variance components for ten of those populations and to measure expected yield improvement from full-sib selection. Mean yield ranged from 3.35–6.81 t ha−1. For five populations the average yield in the last cycle was higher than in the initial cycles. Several populations showed no improvement or yielded less in the final cycle of selection, either because selection intensity was low or because strong selection pressure was applied simultaneously for several traits. Variation resulting from differences among family means within cycles and from interaction between families and locations within cycles were significant in all populations and cycles. Results indicate that variability among full-sib families was maintained throughout the cycles for all populations. The large σ ge 2 /σ g 2 ratio shown by most populations suggests that yield response per cycle could be maximized if the environments in which progenies are tested were subdivided and classified into similar subsets. The proportion of the predicted response realized in improved yield varied for each population.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00292312
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  • 9
    Electronic Resource
    Electronic Resource
    Plant regeneration from immature embryos of 48 elite CIMMYT bread wheats (1996)
    Springer
    Theoretical and applied genetics 92 (1996), S. 163-169 
    Details
    ISSN: 1432-2242
    Keywords: Key wordsBread wheat  ;  Triticum aestivum  ; Culture medium  ;  Embryogenic callus  ;  Plant regeneration
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Forty-eight bread wheat (Triticum aestivum L.) released cultivars and elite advanced lines were evaluated for their ability to produce embryogenic callus using three different media. Basal N6 medium supplemented with dicamba (E1), MS medium containing 2,4-D (E3) or MS medium containing 2,4-D plus different amino acids (E5) were used for callus initiation and maintenance. Plant regeneration was achieved on basal MS medium with indole-3-acetic acid (IAA) and 6benzylamino purine (BAP) and rooting on MS with 1naphthaleneacetic acid (NAA). Percentage regeneration varied widely with both genotype and initiation medium, with values ranging from 2% to 94%. The number of plantlets produced per embryo ranged from 6 to 42. Thirteen genotypes showed at least 50% regeneration after culture on E5 medium; 3 genotypes after culture on E3 initiation medium and 1 after initiation on E1. After four subcultures, over a 16-week period, 41 genotypes (85%) lost their ability to regenerate plants while the remaining 7 lines (15%) retained plant regeneration potential but at reduced levels. E3 medium was found to be the best for maintaining regeneration potential after four subcultures.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/s001220050109
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  • 10
    Electronic Resource
    Electronic Resource
    Analysing yield stability of maize genotypes using a spatial model (1988)
    Springer
    Theoretical and applied genetics 75 (1988), S. 863-868 
    Details
    ISSN: 1432-2242
    Keywords: Spatial model ; Stability ; Maize
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The yield stability of some CIMMYT tropical maize (Zea mays L.) populations of early and intermediate maturity, measured by the performance of varieties derived from them, was determined. Results of the stability analyses, conducted over international environments from 1980 to 1983, indicated that selections from Mezcla Amarilla exhibited good stability in high yielding sites. Varieties derived from Antigua-Republica Dominicana tended to be more stable in unfavourable environments, whereas selections from Blanco Cristalino-1 and Blanco Dentado-2 were stable in both low and high production sites. The combination of enviromental factors in the specific test locations, namely Poza Rica (Mexico), Tocumen (Panama), Islamabad (Pakistan), and Ferkessedougou (Ivory Coast), allowed selection of varieties that are very stable in other regions of the world. The varieties formed on the basis of multilocational data do not seem to be any more stable than those formed using data from a single location.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00258046
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