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  • 1
    Publication Date: 2019
    Description: 〈p〉Mitochondrial ribosomes (mitoribosomes) are large ribonucleoprotein complexes that synthesize proteins encoded by the mitochondrial genome. An extensive cellular machinery responsible for ribosome assembly has been described only for eukaryotic cytosolic ribosomes. Here we report that the assembly of the small mitoribosomal subunit in 〈i〉Trypanosoma brucei〈/i〉 involves a large number of factors and proceeds through the formation of assembly intermediates, which we analyzed by using cryo–electron microscopy. One of them is a 4-megadalton complex, referred to as the small subunit assemblosome, in which we identified 34 factors that interact with immature ribosomal RNA (rRNA) and recognize its functionally important regions. The assembly proceeds through large-scale conformational changes in rRNA coupled with successive incorporation of mitoribosomal proteins, providing an example for the complexity of the ribosomal assembly process in mitochondria.〈/p〉
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2012-07-04
    Description: African trypanosomes cause sleeping sickness in humans, a disease that is typically fatal without chemotherapy. Unfortunately, drug resistance is common and melarsoprol-resistant trypanosomes often display cross-resistance to pentamidine. Although melarsoprol/pentamidine cross-resistance (MPXR) has been an area of intense interest for several decades, our understanding of the underlying mechanisms remains incomplete. Recently, a locus encoding two closely related aquaglyceroporins, AQP2 and AQP3, was linked to MPXR in a high-throughput loss-of-function screen. Here, we show that AQP2 has an unconventional “selectivity filter.” AQP2-specific gene knockout generated MPXR trypanosomes but did not affect resistance to a lipophilic arsenical, whereas recombinant AQP2 reversed MPXR in cells lacking native AQP2 and AQP3. AQP2 was also shown to be disrupted in a laboratory-selected MPXR strain. Both AQP2 and AQP3 gained access to the surface plasma membrane in insect life-cycle–stage trypanosomes but, remarkably, AQP2 was specifically restricted to the flagellar pocket in the bloodstream stage. We conclude that the unconventional aquaglyceroporin, AQP2, renders cells sensitive to both melarsoprol and pentamidine and that loss of AQP2 function could explain cases of innate and acquired MPXR.
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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  • 3
    Publication Date: 2019
    Description: The Holocene, Ahead of Print. 〈br/〉We present a lake-sediment record of pre-Columbian agriculture and fire history from the lowlands of southern Pacific Costa Rica that captures the arrival of maize agriculture at ca. 3360 cal yr BP in the Diquís subregion of the Gran Chiriquí archeological region. Our 4200-year record from Laguna Los Mangos begins 1000 to 2000 years earlier than other lake records from the region and provides the first microfossil and geochemical evidence of vegetation and fire prior to the establishment of maize agriculture. This early portion of the record shows evidence of fire events associated with land clearance or field preparation and maintenance for subsistence activities. Alternatively, these were wildfires ignited unintentionally by people or naturally by lightning or volcanism. Evidence of early maize by ca. 3200 cal yr BP was found at Laguna Zoncho in the southeastern section of the Diquís subregion. Our discovery of early maize agriculture at ca. 3360 cal yr BP in the Laguna Los Mangos watershed in the northwestern portion of the Diquís subregion indicates a rapid adoption of maize agriculture in the region after initial introduction. Pre-Columbian agriculture and fire activity at Los Mangos is nearly continual until historic times, but with a decline after ca. 1170 cal yr BP, coincident with the early Terminal Classic Drought (TCD). We infer a pronounced drying of the lowland environment at Laguna Los Mangos based on a depositional hiatus in the record at ca. 950 during late TCD. Agricultural proxies indicate reduced watershed activity during the ‘Little Ice Age’ following Spanish contact in southern Central America until the 20th century.
    Print ISSN: 0959-6836
    Electronic ISSN: 1477-0911
    Topics: Geography , Geosciences
    Published by Sage
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  • 4
    Publication Date: 2018-12-15
    Description: Entanglement generation can be robust against certain types of noise in approaches that deliberately incorporate dissipation into the system dynamics. The presence of additional dissipation channels may, however, limit fidelity and speed of the process. Here we show how quantum optimal control techniques can be used to both speed up the entanglement generation and increase the fidelity in a realistic setup, whilst respecting typical experimental limitations. For the example of entangling two trapped ion qubits (Lin et al 2013 Nature 504 415), we find an improved fidelity by simply optimizing the polarization of the laser beams utilized in the experiment. More significantly, an alternate combination of transitions between internal states of the ions, when combined with optimized polarization, enables faster entanglement and decreases the error by an order of magnitude.
    Electronic ISSN: 1367-2630
    Topics: Physics
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  • 5
    Publication Date: 2011-07-15
    Description: Spinal cord injuries often occur at the cervical level above the phrenic motor pools, which innervate the diaphragm. The effects of impaired breathing are a leading cause of death from spinal cord injuries, underscoring the importance of developing strategies to restore respiratory activity. Here we show that, after cervical spinal cord injury, the expression of chondroitin sulphate proteoglycans (CSPGs) associated with the perineuronal net (PNN) is upregulated around the phrenic motor neurons. Digestion of these potently inhibitory extracellular matrix molecules with chondroitinase ABC (denoted ChABC) could, by itself, promote the plasticity of tracts that were spared and restore limited activity to the paralysed diaphragm. However, when combined with a peripheral nerve autograft, ChABC treatment resulted in lengthy regeneration of serotonin-containing axons and other bulbospinal fibres and remarkable recovery of diaphragmatic function. After recovery and initial transection of the graft bridge, there was an unusual, overall increase in tonic electromyographic activity of the diaphragm, suggesting that considerable remodelling of the spinal cord circuitry occurs after regeneration. This increase was followed by complete elimination of the restored activity, proving that regeneration is crucial for the return of function. Overall, these experiments present a way to markedly restore the function of a single muscle after debilitating trauma to the central nervous system, through both promoting the plasticity of spared tracts and regenerating essential pathways.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163458/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3163458/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Alilain, Warren J -- Horn, Kevin P -- Hu, Hongmei -- Dick, Thomas E -- Silver, Jerry -- HL080318/HL/NHLBI NIH HHS/ -- NS060767/NS/NINDS NIH HHS/ -- NS25713/NS/NINDS NIH HHS/ -- R01 NS025713/NS/NINDS NIH HHS/ -- R01 NS025713-25/NS/NINDS NIH HHS/ -- R01 NS060767/NS/NINDS NIH HHS/ -- R01 NS060767-04/NS/NINDS NIH HHS/ -- R37 NS025713/NS/NINDS NIH HHS/ -- R37 NS025713-24/NS/NINDS NIH HHS/ -- England -- Nature. 2011 Jul 13;475(7355):196-200. doi: 10.1038/nature10199.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Neurosciences, Case Western Reserve University School of Medicine, 2109 Adelbert Road, Cleveland, Ohio 44106, USA. wja4@case.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21753849" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Axons/physiology ; Chondroitin ABC Lyase/metabolism ; Chondroitin Sulfate Proteoglycans/metabolism ; Diaphragm/physiology ; Disease Models, Animal ; Electromyography ; Extracellular Matrix/metabolism ; Nerve Net/physiology ; Nerve Regeneration/*physiology ; Neuronal Plasticity/physiology ; Phrenic Nerve/cytology/physiology/surgery/transplantation ; Rats ; *Respiration ; Spinal Cord Injuries/*physiopathology
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 6
    Publication Date: 2014-10-16
    Description: Brown adipose tissue (BAT) is specialized in energy expenditure, making it a potential target for anti-obesity therapies. Following exposure to cold, BAT is activated by the sympathetic nervous system with concomitant release of catecholamines and activation of beta-adrenergic receptors. Because BAT therapies based on cold exposure or beta-adrenergic agonists are clinically not feasible, alternative strategies must be explored. Purinergic co-transmission might be involved in sympathetic control of BAT and previous studies reported inhibitory effects of the purinergic transmitter adenosine in BAT from hamster or rat. However, the role of adenosine in human BAT is unknown. Here we show that adenosine activates human and murine brown adipocytes at low nanomolar concentrations. Adenosine is released in BAT during stimulation of sympathetic nerves as well as from brown adipocytes. The adenosine A2A receptor is the most abundant adenosine receptor in human and murine BAT. Pharmacological blockade or genetic loss of A2A receptors in mice causes a decrease in BAT-dependent thermogenesis, whereas treatment with A2A agonists significantly increases energy expenditure. Moreover, pharmacological stimulation of A2A receptors or injection of lentiviral vectors expressing the A2A receptor into white fat induces brown-like cells-so-called beige adipocytes. Importantly, mice fed a high-fat diet and treated with an A2A agonist are leaner with improved glucose tolerance. Taken together, our results demonstrate that adenosine-A2A signalling plays an unexpected physiological role in sympathetic BAT activation and protects mice from diet-induced obesity. Those findings reveal new possibilities for developing novel obesity therapies.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gnad, Thorsten -- Scheibler, Saskia -- von Kugelgen, Ivar -- Scheele, Camilla -- Kilic, Ana -- Glode, Anja -- Hoffmann, Linda S -- Reverte-Salisa, Laia -- Horn, Philipp -- Mutlu, Samet -- El-Tayeb, Ali -- Kranz, Mathias -- Deuther-Conrad, Winnie -- Brust, Peter -- Lidell, Martin E -- Betz, Matthias J -- Enerback, Sven -- Schrader, Jurgen -- Yegutkin, Gennady G -- Muller, Christa E -- Pfeifer, Alexander -- England -- Nature. 2014 Dec 18;516(7531):395-9. doi: 10.1038/nature13816. Epub 2014 Oct 15.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Pharmacology and Toxicology, University Hospital, University of Bonn, 53127 Bonn, Germany. ; 1] Institute of Pharmacology and Toxicology, University Hospital, University of Bonn, 53127 Bonn, Germany [2] Research Training Group 1873, University of Bonn, 53127 Bonn, Germany. ; The Centre of Inflammation and Metabolism and the Centre for Physical Activity Research, Department of Infectious Diseases, Rigshospitalet, 2100 Copenhagen, Denmark. ; Pharmaceutical Institute, Pharmaceutical Chemistry I, University of Bonn, 53121 Bonn, Germany. ; Helmholtz-Zentrum Dresden - Rossendorf, Institute of Radiopharmaceutical Cancer Research, Research Site Leipzig, 04318 Leipzig, Germany. ; Department of Medical and Clinical Genetics, Institute of Biomedicine, The Sahlgrenska Academy, University of Gothenburg, 413 90 Gothenburg, Sweden. ; Department for Molecular Cardiology, University of Dusseldorf, 40225 Dusseldorf, Germany. ; Medicity Research Laboratory, University of Turku, 20520 Turku, Finland. ; 1] Pharmaceutical Institute, Pharmaceutical Chemistry I, University of Bonn, 53121 Bonn, Germany [2] Pharma Center, University of Bonn, 53127 Bonn, Germany. ; 1] Institute of Pharmacology and Toxicology, University Hospital, University of Bonn, 53127 Bonn, Germany [2] Pharma Center, University of Bonn, 53127 Bonn, Germany.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25317558" target="_blank"〉PubMed〈/a〉
    Keywords: Adenosine/analogs & derivatives/*metabolism/pharmacology ; Adenosine A2 Receptor Agonists/pharmacology ; Adipocytes/*metabolism ; Adipose Tissue, Brown/drug effects/*metabolism ; Animals ; Cells, Cultured ; Cricetinae ; Diet ; Humans ; Male ; Mesocricetus ; Mice ; Mice, Inbred C57BL ; Phenethylamines/pharmacology ; Receptor, Adenosine A2A/*metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 7
    Publication Date: 2009-10-17
    Description: Chondroitin sulfate proteoglycans (CSPGs) present a barrier to axon regeneration. However, no specific receptor for the inhibitory effect of CSPGs has been identified. We showed that a transmembrane protein tyrosine phosphatase, PTPsigma, binds with high affinity to neural CSPGs. Binding involves the chondroitin sulfate chains and a specific site on the first immunoglobulin-like domain of PTPsigma. In culture, PTPsigma(-/-) neurons show reduced inhibition by CSPG. A PTPsigma fusion protein probe can detect cognate ligands that are up-regulated specifically at neural lesion sites. After spinal cord injury, PTPsigma gene disruption enhanced the ability of axons to penetrate regions containing CSPG. These results indicate that PTPsigma can act as a receptor for CSPGs and may provide new therapeutic approaches to neural regeneration.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2811318/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2811318/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Shen, Yingjie -- Tenney, Alan P -- Busch, Sarah A -- Horn, Kevin P -- Cuascut, Fernando X -- Liu, Kai -- He, Zhigang -- Silver, Jerry -- Flanagan, John G -- R01 EY011559/EY/NEI NIH HHS/ -- R01 NS025713/NS/NINDS NIH HHS/ -- R37 HD029417/HD/NICHD NIH HHS/ -- R37 NS025713/NS/NINDS NIH HHS/ -- R37 NS025713-22/NS/NINDS NIH HHS/ -- New York, N.Y. -- Science. 2009 Oct 23;326(5952):592-6. doi: 10.1126/science.1178310. Epub 2009 Oct 15.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Cell Biology and Program in Neuroscience, Harvard Medical School, Boston, MA 02115, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19833921" target="_blank"〉PubMed〈/a〉
    Keywords: Aggrecans/metabolism ; Animals ; Astrocytes/metabolism ; Axons/physiology ; Binding Sites ; Cells, Cultured ; Chondroitin Sulfate Proteoglycans/chemistry/*metabolism ; Chondroitin Sulfates/metabolism ; Female ; Ganglia, Spinal/cytology/metabolism ; Ligands ; Mice ; *Nerve Regeneration ; Nerve Tissue Proteins/chemistry/*metabolism ; Neurites/physiology ; Neurons/*physiology ; Protein Binding ; Protein Interaction Domains and Motifs ; Proteoglycans/chemistry/*metabolism ; Receptor-Like Protein Tyrosine Phosphatases, Class ; 2/chemistry/genetics/*metabolism ; Recombinant Fusion Proteins/chemistry/metabolism ; Spinal Cord/metabolism/pathology ; Spinal Cord Injuries/*metabolism/pathology/physiopathology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
    Publication Date: 2013-07-26
    Description: [1]  Accurate air temperature observations in urban areas are important for meteorology and energy demand planning. They are indispensable to study the urban heat island effect and the adverse effects of high temperatures on human health. However, the availability of temperature observations in cities is often limited. Here we show that relatively accurate air temperature information for the urban canopy layer can be obtained from an alternative, nowadays omnipresent source: smartphones. In this study, battery temperatures were collected by an Android application for smartphones. A straightforward heat transfer model is employed to estimate daily mean air temperatures from smartphone battery temperatures for eight major cities around the world. The results demonstrate the enormous potential of this crowdsourcing application for real-time temperature monitoring in densely populated areas.
    Print ISSN: 0094-8276
    Electronic ISSN: 1944-8007
    Topics: Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 9
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    American Association of Stratigraphic Palynologists (AASP)
    Publication Date: 2017-06-03
    Description: Charcoal records of past fires are important for reconstruction of palaeoenvironments and palaeoclimate, particularly when compared with pollen records of past vegetation, but such records are scarce in the southeastern US. To address the question of how fire activity changed from the Last Glacial Maximum (LGM) into the Holocene as vegetation changed, we chose a site in central Tennessee for which a pollen record exists back to 23,000 cal yr BP. We developed a new microscopic charcoal record based on point counting of microscopic charcoal fragments on pollen slides from Anderson Pond studied by Hazel Delcourt (1979) . The record we produced spans the interval from the LGM to recent and is directly tied to the original pollen record. Charcoal:pollen ratios and charcoal area concentrations are high during the late glacial and track the coniferous pollen record from the LGM to the late glacial, at which point spruce and jack pine pollen markedly diminished along with fire activity. From around 15,000 cal yr BP to the beginning of the middle Holocene, charcoal indices are low. High fire activity began around 8200 cal yr BP, and remained high from ca. 8200–5000 cal yr BP, an interval broadly corresponding to the Mid-Holocene Warm Period (MHWP). The evidence of higher fire activity during the MHWP is coincident with increased percentages of indeterminate pollen grains that are interpreted to signal drier conditions. Charcoal area concentrations declined following the MHWP. Viewed against the original pollen record, the patterns in microscopic charcoal abundance from the LGM to recent at Anderson Pond argue for the strong influence of vegetation as well as climate in driving fire occurrence in eastern temperate North America.
    Print ISSN: 0191-6122
    Electronic ISSN: 1558-9188
    Topics: Geosciences
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  • 10
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1979-06-15
    Description: Norepinephrine reversibly antagonizes three calcium-dependent potentials recorded from rat postganglionic neurons. Norepinephrine inhibits the development of a shoulder on the aciton potential, the magnitude of the hyperpolarizing afterpotential, and the rate of rise and amplitude of the calcium spike. The action of norepinephrine is antagonized by the alpha-adrenergic antagonist phentolamine, but not by MJ 1999, a beta-adrenergic antagonist. These results suggest that activation of an alpha-adrenergic receptor may antagonize a voltage-sensitive calcium current.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Horn, J P -- McAfee, D A -- New York, N.Y. -- Science. 1979 Jun 15;204(4398):1233-5.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/221979" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Calcium/antagonists & inhibitors/*physiology ; Dopamine/pharmacology ; Electric Conductivity ; Ganglia, Autonomic/*drug effects ; In Vitro Techniques ; Ion Channels/*drug effects ; Isoproterenol/pharmacology ; Membrane Potentials/*drug effects ; Neurons/drug effects ; Norepinephrine/*pharmacology ; Rats ; Receptors, Adrenergic, alpha/drug effects
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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