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  • 1
    Publication Date: 2011-11-17
    Description: Author(s): L. Holender, M. A. Santos, M. T. D. Orlando, and I. V. Vancea [Phys. Rev. D 84, 105024] Published Wed Nov 16, 2011
    Keywords: Field theory, formal particle theory
    Print ISSN: 0556-2821
    Electronic ISSN: 1089-4918
    Topics: Physics
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  • 2
    Publication Date: 2012-10-27
    Description: Interference of organotin with animal endocrine systems represents a notable case of physiological disruption. Caenogastropod molluscs are particularly sensitive to exposure to these compounds, developing a condition termed imposex, the superimposition of male sexual secondary features onto females. Recently, various studies have shown that the retinoic X receptor is a high-affinity ligand to tributyltin (TBT), while simultaneously hampering expression of the receptor gene. Curiously, in ascidians TBT has been shown to downregulate the expression of alcohol dehydrogenase class III ( Adh3 ), an enzyme controversially linked with retinol oxidation. Here we isolate an Adh3 orthologue in Nucella lapillus , characterize its basal tissue expression profile and determine the gene expression dynamics in gonads and digestive gland upon TBT and retinol exposure. We find that TBT does not affect Adh3 expression in the tested tissues of N. lapillus . However, exposure to retinol, the precursor of retinoic acid in vertebrates, caused a significant downregulation of Adh3 levels in female gonads.
    Print ISSN: 0260-1230
    Electronic ISSN: 1464-3766
    Topics: Biology
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  • 3
    Publication Date: 2016-05-13
    Description: Author(s): B. Mettout, P. Tolédano, A. S. B. Sombra, A. F. G. Furtado Filho, J. P. C. do Nascimento, M. A. Santos da Silva, P. Gisse, and H. Vasseur Multiferroic materials are intensively investigated as potential candidates for a new generation of solar cells, due to the coexistence in their phases of ferroelectricity and magnetic order with low band gap. However, symmetry considerations, which determine the interplay between the magnetoelectri… [Phys. Rev. B 93, 195123] Published Thu May 12, 2016
    Keywords: Electronic structure and strongly correlated systems
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
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  • 4
  • 5
    Publication Date: 2012-08-16
    Description: Author(s): M. C. B. Abdalla, L. Holender, M. A. Santos, and I. V. Vancea In this paper, we construct for the first time the noncommutative fluid with the deformed Poincaré invariance. To this end, the realization formalism of the noncommutative spaces is employed and the results are particularized to the Snyder space. The noncommutative fluid generalizes the fluid model ... [Phys. Rev. D 86, 045019] Published Wed Aug 15, 2012
    Keywords: Field theory, formal particle theory
    Print ISSN: 0556-2821
    Electronic ISSN: 1089-4918
    Topics: Physics
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  • 6
    Publication Date: 2014-12-20
    Description: El Complejo Migmatítico de Mindelo aflora en la zona costera de Portugal al norte de Oporto y se compone de un conjunto de litologías migmatíticas y graníticas. Las relaciones de campo, petrografía, geoquímica y las características isotópicas de las diferentes litologías permiten inferir la secuencia de procesos anatécticos que dio lugar a su típica heterogeneidad litológica. La composición química e isotópica de la secuencia metasedimentaria del Complejo Esquisto-Grauváquico es idéntica a la de las metatexitas, lo que sugiere que sea el protolito de las litologías del Complejo de Mindelo. La fusión se ha producido en varios niveles estructurales y por lo tanto en diferentes condiciones de presión y temperatura, dando lugar a rocas con características específicas: i) en niveles relativamente superficiales ( 〈 3,5 kbar), las metatexitas se forman principalmente por fusión parcial húmeda seguida de fusión incongruente de biotita produciendo cordierita peritéctica, cuarzo, plagioclasa y cantidades menores de feldespato potásico. Los leucogranitos y venas de leucogranito son consecuencia de la migración de leucosomas. En niveles ligeramente más profundas la tasa de fusión es superior, lo que conduce a la formación de diatexitas y de granitos de dos micas que intruyen a las metatexitas. Este material se eleva en la corteza e incorpora abundantes xenolitas formando un cuerpo granítico muy heterogéneo. La turmalinización de leucogranitos, granitos de dos micas, migmatitas y metasedimentos tuvo lugar en condiciones subsolidus, asociada a aplitas/pegmatitas que cortan al resto de litologías. Una última entrada de fluidos acuosos condujo a la moscovitización de metatexitas, granitoides y metasedimentos. La migmatización comenzó después de la fase de engrosamiento cortical de la Orogenia Varisca y estuvo activa durante la siguiente etapa de deformación y cizalla. Los pulsos de diferentes fluidos que afectaron el Complejo Migmatítico de Mindelo probablemente están relacionados con el emplazamiento de los cuerpos graníticos sin y tardi -D 3 . El Complejo Migmatítico de Mindelo representa un ejemplo de migmatitas formadas en condiciones de baja presión e ilustra algunas de las reacciones que implican la fusión de rocas pelíticas en alto grado y sus alteraciones minerales posteriores debido a la infiltración de diferentes tipos de fluidos.
    Print ISSN: 0367-0449
    Electronic ISSN: 1988-3250
    Topics: Geosciences
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  • 7
    Publication Date: 2009-05-26
    Description: Candida species are the most common cause of opportunistic fungal infection worldwide. Here we report the genome sequences of six Candida species and compare these and related pathogens and non-pathogens. There are significant expansions of cell wall, secreted and transporter gene families in pathogenic species, suggesting adaptations associated with virulence. Large genomic tracts are homozygous in three diploid species, possibly resulting from recent recombination events. Surprisingly, key components of the mating and meiosis pathways are missing from several species. These include major differences at the mating-type loci (MTL); Lodderomyces elongisporus lacks MTL, and components of the a1/2 cell identity determinant were lost in other species, raising questions about how mating and cell types are controlled. Analysis of the CUG leucine-to-serine genetic-code change reveals that 99% of ancestral CUG codons were erased and new ones arose elsewhere. Lastly, we revise the Candida albicans gene catalogue, identifying many new genes.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2834264/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2834264/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Butler, Geraldine -- Rasmussen, Matthew D -- Lin, Michael F -- Santos, Manuel A S -- Sakthikumar, Sharadha -- Munro, Carol A -- Rheinbay, Esther -- Grabherr, Manfred -- Forche, Anja -- Reedy, Jennifer L -- Agrafioti, Ino -- Arnaud, Martha B -- Bates, Steven -- Brown, Alistair J P -- Brunke, Sascha -- Costanzo, Maria C -- Fitzpatrick, David A -- de Groot, Piet W J -- Harris, David -- Hoyer, Lois L -- Hube, Bernhard -- Klis, Frans M -- Kodira, Chinnappa -- Lennard, Nicola -- Logue, Mary E -- Martin, Ronny -- Neiman, Aaron M -- Nikolaou, Elissavet -- Quail, Michael A -- Quinn, Janet -- Santos, Maria C -- Schmitzberger, Florian F -- Sherlock, Gavin -- Shah, Prachi -- Silverstein, Kevin A T -- Skrzypek, Marek S -- Soll, David -- Staggs, Rodney -- Stansfield, Ian -- Stumpf, Michael P H -- Sudbery, Peter E -- Srikantha, Thyagarajan -- Zeng, Qiandong -- Berman, Judith -- Berriman, Matthew -- Heitman, Joseph -- Gow, Neil A R -- Lorenz, Michael C -- Birren, Bruce W -- Kellis, Manolis -- Cuomo, Christina A -- BB/F00513X/1/Biotechnology and Biological Sciences Research Council/United Kingdom -- BB/F013566/1/Biotechnology and Biological Sciences Research Council/United Kingdom -- G0400284/Medical Research Council/United Kingdom -- HHSN266200400001C/AO/NIAID NIH HHS/ -- R01 AI050113/AI/NIAID NIH HHS/ -- R01 AI075096/AI/NIAID NIH HHS/ -- R01 DE015873/DE/NIDCR NIH HHS/ -- R01 HG004037/HG/NHGRI NIH HHS/ -- R01 HG004037-02/HG/NHGRI NIH HHS/ -- U54 HG003067/HG/NHGRI NIH HHS/ -- U54 HG003067-06/HG/NHGRI NIH HHS/ -- Wellcome Trust/United Kingdom -- England -- Nature. 2009 Jun 4;459(7247):657-62. doi: 10.1038/nature08064.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉UCD School of Biomolecular and Biomedical Science, Conway Institute, University College Dublin, Belfield, Dublin 4, Ireland. geraldine.butler@ucd.ie〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19465905" target="_blank"〉PubMed〈/a〉
    Keywords: Candida/classification/genetics/*pathogenicity/*physiology ; Codon/genetics ; Conserved Sequence ; Diploidy ; *Evolution, Molecular ; Genes, Fungal/genetics ; Genome, Fungal/*genetics ; Meiosis/genetics ; Polymorphism, Genetic ; Reproduction/*genetics ; Saccharomyces/classification/genetics ; Virulence/genetics
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 8
    Publication Date: 2010-07-31
    Description: Programmed genetic rearrangements in lymphocytes require transcription at antigen receptor genes to promote accessibility for initiating double-strand break (DSB) formation critical for DNA recombination and repair. Here, we showed that activated B cells deficient in the PTIP component of the MLL3 (mixed-lineage leukemia 3)-MLL4 complex display impaired trimethylation of histone 3 at lysine 4 (H3K4me3) and transcription initiation of downstream switch regions at the immunoglobulin heavy-chain (Igh) locus, leading to defective immunoglobulin class switching. We also showed that PTIP accumulation at DSBs contributes to class switch recombination (CSR) and genome stability independently of Igh switch transcription. These results demonstrate that PTIP promotes specific chromatin changes that control the accessibility of the Igh locus to CSR and suggest a nonredundant role for the MLL3-MLL4 complex in altering antibody effector function.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3008398/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3008398/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Daniel, Jeremy A -- Santos, Margarida Almeida -- Wang, Zhibin -- Zang, Chongzhi -- Schwab, Kristopher R -- Jankovic, Mila -- Filsuf, Darius -- Chen, Hua-Tang -- Gazumyan, Anna -- Yamane, Arito -- Cho, Young-Wook -- Sun, Hong-Wei -- Ge, Kai -- Peng, Weiqun -- Nussenzweig, Michel C -- Casellas, Rafael -- Dressler, Gregory R -- Zhao, Keji -- Nussenzweig, Andre -- Z01 AR041149-03/Intramural NIH HHS/ -- Z01 AR041149-04/Intramural NIH HHS/ -- Z01 DK047055-01/Intramural NIH HHS/ -- Z01 DK047055-02/Intramural NIH HHS/ -- Z01 DK075003-04/Intramural NIH HHS/ -- Z01 DK075003-05/Intramural NIH HHS/ -- Z99 DK999999/Intramural NIH HHS/ -- ZIA AR041149-05/Intramural NIH HHS/ -- ZIA DK075017-03/Intramural NIH HHS/ -- ZIADK047055-03/DK/NIDDK NIH HHS/ -- ZIADK075003-06/DK/NIDDK NIH HHS/ -- ZIADK075017-01/DK/NIDDK NIH HHS/ -- Howard Hughes Medical Institute/ -- New York, N.Y. -- Science. 2010 Aug 20;329(5994):917-23. doi: 10.1126/science.1187942. Epub 2010 Jul 29.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Experimental Immunology Branch, National Cancer Institute, National Institutes of Health (NIH), Bethesda, MD 20892, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/20671152" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Antibody Specificity/genetics ; Carrier Proteins/genetics/*physiology ; Cytidine Deaminase/metabolism ; Dna ; Histones/metabolism ; Immunoglobulin Class Switching/genetics/*physiology ; Immunoglobulin Switch Region ; Methylation ; Mice ; Nuclear Proteins/genetics/*physiology ; Promoter Regions, Genetic ; Recombination, Genetic ; Transcriptional Activation
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 9
    Publication Date: 2016-03-11
    Description: Journal of Medicinal Chemistry DOI: 10.1021/acs.jmedchem.5b01098
    Topics: Chemistry and Pharmacology
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  • 10
    Publication Date: 2014-08-01
    Description: Self-renewal is the hallmark feature both of normal stem cells and cancer stem cells. Since the regenerative capacity of normal haematopoietic stem cells is limited by the accumulation of reactive oxygen species and DNA double-strand breaks, we speculated that DNA damage might also constrain leukaemic self-renewal and malignant haematopoiesis. Here we show that the histone methyl-transferase MLL4, a suppressor of B-cell lymphoma, is required for stem-cell activity and an aggressive form of acute myeloid leukaemia harbouring the MLL-AF9 oncogene. Deletion of MLL4 enhances myelopoiesis and myeloid differentiation of leukaemic blasts, which protects mice from death related to acute myeloid leukaemia. MLL4 exerts its function by regulating transcriptional programs associated with the antioxidant response. Addition of reactive oxygen species scavengers or ectopic expression of FOXO3 protects MLL4(-/-) MLL-AF9 cells from DNA damage and inhibits myeloid maturation. Similar to MLL4 deficiency, loss of ATM or BRCA1 sensitizes transformed cells to differentiation, suggesting that myeloid differentiation is promoted by loss of genome integrity. Indeed, we show that restriction-enzyme-induced double-strand breaks are sufficient to induce differentiation of MLL-AF9 blasts, which requires cyclin-dependent kinase inhibitor p21(Cip1) (Cdkn1a) activity. In summary, we have uncovered an unexpected tumour-promoting role of genome guardians in enforcing the oncogene-induced differentiation blockade in acute myeloid leukaemia.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4410707/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4410707/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Santos, Margarida A -- Faryabi, Robert B -- Ergen, Aysegul V -- Day, Amanda M -- Malhowski, Amy -- Canela, Andres -- Onozawa, Masahiro -- Lee, Ji-Eun -- Callen, Elsa -- Gutierrez-Martinez, Paula -- Chen, Hua-Tang -- Wong, Nancy -- Finkel, Nadia -- Deshpande, Aniruddha -- Sharrow, Susan -- Rossi, Derrick J -- Ito, Keisuke -- Ge, Kai -- Aplan, Peter D -- Armstrong, Scott A -- Nussenzweig, Andre -- CA140575/CA/NCI NIH HHS/ -- CA66996/CA/NCI NIH HHS/ -- P30 CA008748/CA/NCI NIH HHS/ -- R00 CA139009/CA/NCI NIH HHS/ -- R01 DK098263/DK/NIDDK NIH HHS/ -- R01 DK100689/DK/NIDDK NIH HHS/ -- Intramural NIH HHS/ -- England -- Nature. 2014 Oct 2;514(7520):107-11. doi: 10.1038/nature13483. Epub 2014 Jul 27.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA. ; 1] Laboratory of Genome Integrity, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA [2]. ; The Genetics Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA. ; Laboratory of Endocrinology and Receptor Biology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892, USA. ; 1] Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, Massachusetts 02115, USA [2] Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, Massachusetts 02138, USA. ; Human Oncology and Pathogenesis Program and Department of Pediatrics, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA. ; Experimental Immunology Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20892, USA. ; Ruth L. and David S. Gottesman Institute for Stem Cell and Regenerative Medicine Research, Departments of Cell Biology and Medicine, Albert Einstein Cancer Center, Albert Einstein College of Medicine, Bronx, New York 10461, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25079327" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Ataxia Telangiectasia Mutated Proteins/metabolism ; BRCA1 Protein/genetics/metabolism ; Cell Transformation, Neoplastic ; Cyclin-Dependent Kinase Inhibitor p21/metabolism ; DNA Breaks, Double-Stranded ; *DNA Damage ; DNA Repair ; Female ; Gene Expression Regulation, Neoplastic ; Genes, BRCA1 ; Hematopoietic Stem Cells/cytology/metabolism/pathology ; Histone-Lysine N-Methyltransferase/deficiency/genetics/metabolism ; Leukemia, Myeloid, Acute/*enzymology/*pathology ; Male ; Mice ; *Myelopoiesis ; Oncogene Proteins, Fusion/genetics/metabolism ; Reactive Oxygen Species/metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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