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  • Chesapeake Bay  (5)
  • Stratification  (3)
  • Atmosphere-ocean interaction  (1)
  • 1
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    Physical controls on hypoxia in Chesapeake Bay : a numerical modeling study (2013)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2013. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 118 (2013): 1239–1256, doi:10.1002/jgrc.20138.
    Description: A three-dimensional circulation model with a relatively simple dissolved oxygen model is used to examine the role that physical forcing has on controlling hypoxia and anoxia in Chesapeake Bay. The model assumes that the biological utilization of dissolved oxygen is constant in both time and space, isolating the role that physical forces play in modulating oxygen dynamics. Despite the simplicity of the model, it demonstrates skill in reproducing the observed variability of dissolved oxygen in the bay, highlighting the important role that variations in physical forcing have on the seasonal cycle of hypoxia. Model runs demonstrate significant changes in the annual integrated hypoxic volume as a function of river discharge, water temperature, and wind speed and direction. Variations in wind speed and direction had the greatest impact on the observed seasonal cycle of hypoxia and large impacts on the annually integrated hypoxic volume. The seasonal cycle of hypoxia was relatively insensitive to synoptic variability in river discharge, but integrated hypoxic volumes were sensitive to the overall magnitude of river discharge at annual time scales. Increases in river discharge were shown to increase hypoxic volumes, independent from the associated biological response to higher nutrient delivery. However, increases in hypoxic volume were limited at very high river discharge because increased advective fluxes limited the overall length of the hypoxic region. Changes in water temperature and its control on dissolved oxygen saturation were important to both the seasonal cycle of hypoxia and the overall magnitude of hypoxia in a given year.
    Description: The funding for this research was obtained from NSF Grant OCE-0954690 and supported by NOAA via the U.S. IOOS Office (Award Numbers NA10NOS0120063 and NA11NOS0120141) and managed by the Southeastern Universities Research Association.
    Description: 2013-09-14
    Keywords: Hypoxia ; Stratification ; Mixing ; Wind
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
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    Mixing of dissolved oxygen in Chesapeake Bay driven by the interaction between wind-driven circulation and estuarine bathymetry (2016)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 5639–5654, doi:10.1002/2016JC011924.
    Description: Field observations collected in Chesapeake Bay demonstrate how wind-driven circulation interacts with estuarine bathymetry to control when and where the vertical mixing of dissolved oxygen occurs. In the across-Bay direction, the lateral Ekman response to along-Bay wind forcing contributes to the vertical mixing of dissolved oxygen in two ways. First, the lateral tilting of the pycnocline/oxycline, consistent with the thermal wind relationship, advects the region of high vertical gradient into the surface and bottom boundary layers where mixing can occur. Second, upwelling of low-oxygen water to the surface enhances the atmospheric influx. In the along-Bay direction, the abrupt change in bottom depth associated with Rappahannock Shoal results in surface convergence and downwelling, leading to localized vertical mixing. Water that is mixed on the shoal is entrained into the up-Bay residual bottom flow resulting in increases in bottom dissolved oxygen that propagate up the system. The increases in dissolved oxygen are often associated with increases in temperature and decreases in salinity, consistent with vertical mixing. However, the lagged arrival moving northward suggests that the propagation of this signal up the Bay is due to advection.
    Description: National Science Foundation Grant Number: OCE-1338518
    Description: 2017-02-08
    Keywords: Mixing ; Hypoxia ; Chesapeake Bay
    Repository Name: Woods Hole Open Access Server
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  • 3
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    Sediment pumping by tidal asymmetry in a partially mixed estuary (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 112 (2007): C07028, doi:10.1029/2006JC003784.
    Description: Observations collected at two laterally adjacent locations are used to examine the processes driving sediment transport in the partially mixed York River Estuary. Estimates of sediment flux are decomposed into advective and pumping components, to evaluate the importance of tidal asymmetries in turbulent mixing. At the instrumented location in the estuarine channel, a strong asymmetry in internal mixing due to tidal straining is documented, with higher values of eddy viscosity occurring during the less-stratified flood tide. As a result of this asymmetry, more sediment is resuspended during the flood phase of the tide resulting in up-estuary pumping of sediment despite a net down-estuary advective flux. At the instrumented location on the adjacent shoal, where no pronounced tidal asymmetry in internal mixing was found, both the pumping flux and advective flux were directed down-estuary. The down-estuary pumping of sediment on the shoal appears to be driven by asymmetries in bed stress. The impact of tidal asymmetries in bed stress at the channel location was negated because the amount of sediment available for resuspension was limited. As a result, the pumping flux was dominated by the overlying asymmetries in internal mixing. The asymmetries in stratification appear to exert an important control on the vertical distribution of sediment by both impacting the eddy diffusivity as well as the fall velocity. During the more turbulent flood tide, the fall velocities are smaller suggesting the Kolmogorov microscale is setting the upper bound on floc diameter.
    Description: Support for this research at VIMS was provided by the National Science Foundation Division of Ocean Sciences grants OCE-9984941 and OCE-0536572.
    Keywords: Sediment transport ; Tidal asymmetry ; Stratification
    Repository Name: Woods Hole Open Access Server
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  • 4
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    Estimating hypoxic volume in the Chesapeake Bay using two continuously sampled oxygen profiles (2018)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Journal of Geophysical Research: Oceans 123 (2018): 6392-6407, doi:10.1029/2018JC014129.
    Description: Low levels of dissolved oxygen (DO) occur in many embayments throughout the world and have numerous detrimental effects on biota. Although measurement of in situ DO is straightforward with modern instrumentation, quantifying the volume of water in a given embayment that is hypoxic (hypoxic volume (HV)) is a more difficult task; however, this information is critical for determining whether management efforts to increase DO are having an overall impact. This paper uses output from a three‐dimensional numerical model to demonstrate that HV in Chesapeake Bay can be estimated well with as few as two vertical profiles. In addition, the cumulative hypoxic volume (HVC; the total amount of hypoxia in a given year) can be calculated with relatively low uncertainty (〈10%) if continuous DO data are available from two strategically positioned vertical profiles. This is because HV in the Chesapeake Bay is strongly constrained by the geometry of the embayment. A simple Geometric HV calculation method is presented and numerical model results are used to illustrate that for calculating HVC, the results using two daily‐averaged profiles are typically more accurate than those of the standard method that interpolates bimonthly cruise data. Bimonthly data produce less accurate estimates of HVC because high‐frequency changes in oxygen concentration, for example, due to regional‐weather‐ or storm‐induced changes in wind direction and magnitude, are not resolved. The advantages of supplementing cruise‐based sampling with continuous vertical profiles to estimate HVC should be applicable to other systems where hypoxic water is constrained to a specific area by bathymetry.
    Description: NOAA Grant Number: NA13NOS0120139
    Keywords: Chesapeake Bay ; Oxygen ; Dead zone ; Hypoxia ; Observing systems ; Estuary
    Repository Name: Woods Hole Open Access Server
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  • 5
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    Mixing by shear instability at high Reynolds number (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 37 (2010): L22607, doi:10.1029/2010GL045272.
    Description: Shear instability is the dominant mechanism for converting fluid motion to mixing in the stratified ocean and atmosphere. The transition to turbulence has been well characterized in laboratory settings and numerical simulations at moderate Reynolds number—it involves “rolling up”, i.e., overturning of the density structure within the cores of the instabilities. In contrast, measurements in an energetic estuarine shear zone reveal that the mixing induced by shear instability at high Reynolds number does not primarily occur by overturning in the cores; rather it results from secondary shear instabilities within the zones of intensified shear separating the cores. This regime is not likely to be observed in the relatively low Reynolds number flows of the laboratory or in direct numerical simulations, but it is likely a common occurrence in the ocean and atmosphere.
    Description: This research was supported by NSF grant OCE‐0824871 and ONR grant N00014‐0810495.
    Keywords: Stratification ; Turbulence ; Mixing
    Repository Name: Woods Hole Open Access Server
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  • 6
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    Combining observations and numerical model results to improve estimates of hypoxic volume within the Chesapeake Bay, USA (2014)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Journal of Geophysical Research: Oceans 118 (2013): 4924–4944, doi:10.1002/jgrc.20331.
    Description: The overall size of the “dead zone” within the main stem of the Chesapeake Bay and its tidal tributaries is quantified by the hypoxic volume (HV), the volume of water with dissolved oxygen (DO) less than 2 mg/L. To improve estimates of HV, DO was subsampled from the output of 3-D model hindcasts at times/locations matching the set of 2004–2005 stations monitored by the Chesapeake Bay Program. The resulting station profiles were interpolated to produce bay-wide estimates of HV in a manner consistent with nonsynoptic, cruise-based estimates. Interpolations of the same stations sampled synoptically, as well as multiple other combinations of station profiles, were examined in order to quantify uncertainties associated with interpolating HV from observed profiles. The potential uncertainty in summer HV estimates resulting from profiles being collected over 2 weeks rather than synoptically averaged ∼5 km3. This is larger than that due to sampling at discrete stations and interpolating/extrapolating to the entire Chesapeake Bay (2.4 km3). As a result, sampling fewer, selected stations over a shorter time period is likely to reduce uncertainties associated with interpolating HV from observed profiles. A function was derived that when applied to a subset of 13 stations, significantly improved estimates of HV. Finally, multiple metrics for quantifying bay-wide hypoxia were examined, and cumulative hypoxic volume was determined to be particularly useful, as a result of its insensitivity to temporal errors and climate change. A final product of this analysis is a nearly three-decade time series of improved estimates of HV for Chesapeake Bay.
    Description: Funding for this study was provided by the IOOS COMT Program through NOAA grants NA10NOS0120063 and NA11NOS0120141. Additional funding was provided by NSF grant OCE-1061564.
    Keywords: Hypoxia ; Hypoxic volume ; Chesapeake Bay ; Dead zone ; Water quality ; Dissolved oxygen
    Repository Name: Woods Hole Open Access Server
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  • 7
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    A diel method of estimating gross primary production: 1. Validation with a realistic numerical model of Chesapeake Bay (2019)
    American Geophysical Union
    Details
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 123(11), (2018): 8411-8429, doi: 10.1029/2018JC014178.
    Description: A method for estimating gross primary production (GPP) is presented and validated against a numerical model of Chesapeake Bay that includes realistic physical and biological forcing. The method statistically fits a photosynthesis‐irradiance response curve using the observed near‐surface time rate of change of dissolved oxygen and the incoming solar radiation, yielding estimates of the light‐saturated photosynthetic rate and the initial slope of the photosynthesis‐irradiance response curve. This allows estimation of GPP with 15‐day temporal resolution. The method is applied to the output from a numerical model that has high skill at reproducing both surface and near‐bottom dissolved oxygen variations observed in Chesapeake Bay in 2013. The rate of GPP predicted by the numerical model is known, as are the contributions from physical processes, allowing the proposed diel method to be rigorously assessed. At locations throughout the main stem of the Bay, the method accurately extracts the underlying rate of GPP, including pronounced seasonal variability and spatial variability. Errors associated with the method are primarily the result of contributions by the divergence in turbulent oxygen flux, which changes sign over the surface mixed layer. As a result, there is an optimal vertical location with minimal bias where application of the method is most accurate.
    Description: This paper is the result of research funded in part by NOAA's U.S. Integrated Ocean Observing System (IOOS) Program Office as a subcontract to the Woods Hole Oceanographic Institution under award NA13NOS120139 to the Southeastern University Research Association. All of the model output, as well as both the CBIBS data (2010–2016) and the bottom oxygen data of Scully (2016b), are publicly available through the THREDDS server associated with the IOOS Coastal Modeling Testbed site: https://comt.ioos.us/projects/cb_hypoxia.
    Description: 2019-05-24
    Keywords: Gross primary production ; Vertical mixing ; Numerical model ; Chesapeake Bay
    Repository Name: Woods Hole Open Access Server
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  • 8
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    A diel method of estimating gross primary production: 2. Application to 7 years of near-surface dissolved oxygen data in Chesapeake Bay. (2019)
    American Geophysical Union
    Details
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 123(11), (2018): 8430-8443, doi: 10.1029/2018JC014179.
    Description: A diel method for estimating gross primary production (GPP) is applied to nearly continuous measurements of near‐surface dissolved oxygen collected at seven locations throughout the main stem of Chesapeake Bay. The data were collected through the Chesapeake Bay Interpretive Buoy System and span the period 2010–2016. At all locations, GPP exhibits pronounced seasonal variability consistent temperature‐dependent phytoplankton growth. At the Susquehanna Buoy, which is located within the estuarine turbidity maximum, rates of GPP are negatively correlated with uncalibrated turbidity data consistent with light limitation at this location. The highest rates of GPP are located immediately down Bay from the estuarine turbidity maximum and decrease moving seaward consistent with nutrient limitation. Rates of GPP at the mouth (First Landing Buoy) are roughly a factor of 3 lower than the rates in the upper Bay (Patapsco). At interannual time scales, the summer (June–July) rate of GPP averaged over all stations is positively correlated (r2 = 0.62) with the March Susquehanna River discharge and a multiple regression model that includes spring river discharge, and summer water temperature can explain most (r2 = 0.88) of the interannual variance in the observed rate of GPP. The correlation with river discharge is consistent with an increase in productivity fueled by increased nutrient loading. More generally, the spatial and temporal patterns inferred using this method are consistent with our current understanding of primary production in the Bay, demonstrating the potential this method has for making highly resolved measurements in less well studied estuarine systems.
    Description: This paper is the result of research funded in part by NOAA's U.S. Integrated Ocean Observing System (IOOS) Program Office as a subcontract to the Woods Hole Oceanographic Institution under award NA13NOS120139 to the Southeastern University Research Association. All of the data analyzed in this paper are publicly available including the CBIBS data (http://buoybay.noaa.gov), the NCEP NARR data (https://www.esrl.noaa.gov/psd), and the Kd‐490 MODIS data (ftp://ftp.star.nesdis.noaa.gov/pub/socd1/ecn/data/modis/k490noaa/monthly/cd/). Model output analyzed in this paper is publicly available through the THREDDS server associated with the IOOS Coastal and Ocean Modeling Testbed (COMT) site (https://comt.ioos.us/projects/cb_hypoxia). Postprocessed and compiled data for all seven CBIBS locations including the interpolated values of incoming solar radiation and satellite‐derived Kd‐490 can also be download from the COMT site.
    Description: 2019-05-25
    Keywords: Gross primary production ; Chesapeake Bay ; Observing system ; Diel variability
    Repository Name: Woods Hole Open Access Server
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  • 9
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    Surface wave effects on the translation of wind stress across the air–sea interface in a fetch-limited, coastal embayment (2017)
    American Meteorological Society
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    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2017. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 47 (2017): 1921-1939, doi:10.1175/JPO-D-16-0146.1.
    Description: The role of surface gravity waves in structuring the air–sea momentum flux is examined in the middle reaches of Chesapeake Bay. Observed wave spectra showed that wave direction in Chesapeake Bay is strongly correlated with basin geometry. Waves preferentially developed in the direction of maximum fetch, suggesting that dominant wave frequencies may be commonly and persistently misaligned with local wind forcing. Direct observations from an ultrasonic anemometer and vertical array of ADVs show that the magnitude and direction of stress changed across the air–sea interface, suggesting that a stress divergence occurred at or near the water surface. Using a numerical wave model in combination with direct flux measurements, the air–sea momentum flux was partitioned between the surface wave field and the mean flow. Results indicate that the surface wave field can store or release a significant fraction of the total momentum flux depending on the direction of the wind. When wind blew across dominant fetch axes, the generation of short gravity waves stored as much as 40% of the total wind stress. Accounting for the storage of momentum in the surface wave field closed the air–sea momentum budget. Agreement between the direction of Lagrangian shear and the direction of the stress vector in the mixed surface layer suggests that the observed directional difference was due to the combined effect of breaking waves producing downward sweeps of momentum in the direction of wave propagation and the straining of that vorticity field in a manner similar to Langmuir turbulence.
    Description: This work was supported by National Science Foundation Grants OCE-1061609 and OCE-1339032.
    Description: 2018-01-13
    Keywords: Atmosphere-ocean interaction ; Coastal flows ; Mixing ; Momentum ; Wind stress ; Wind waves
    Repository Name: Woods Hole Open Access Server
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