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  • 1
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    An essential cell cycle regulation gene causes hybrid inviability in Drosophila (2015)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2015-12-19
    Description: Speciation, the process by which new biological species arise, involves the evolution of reproductive barriers, such as hybrid sterility or inviability between populations. However, identifying hybrid incompatibility genes remains a key obstacle in understanding the molecular basis of reproductive isolation. We devised a genomic screen, which identified a cell cycle-regulation gene as the cause of male inviability in hybrids resulting from a cross between Drosophila melanogaster and D. simulans. Ablation of the D. simulans allele of this gene is sufficient to rescue the adult viability of hybrid males. This dominantly acting cell cycle regulator causes mitotic arrest and, thereby, inviability of male hybrid larvae. Our genomic method provides a facile means to accelerate the identification of hybrid incompatibility genes in other model and nonmodel systems.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4703311/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4703311/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Phadnis, Nitin -- Baker, EmilyClare P -- Cooper, Jacob C -- Frizzell, Kimberly A -- Hsieh, Emily -- de la Cruz, Aida Flor A -- Shendure, Jay -- Kitzman, Jacob O -- Malik, Harmit S -- 5T32 HD0741/HD/NICHD NIH HHS/ -- HG006283/HG/NHGRI NIH HHS/ -- R01 GM074108/GM/NIGMS NIH HHS/ -- R01 GM115914/GM/NIGMS NIH HHS/ -- Howard Hughes Medical Institute/ -- New York, N.Y. -- Science. 2015 Dec 18;350(6267):1552-5. doi: 10.1126/science.aac7504.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, University of Utah, Salt Lake City, UT 84112, USA. nitin.phadnis@utah.edu hsmalik@fhcrc.org. ; Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA. ; Department of Biology, University of Utah, Salt Lake City, UT 84112, USA. ; Genome Sciences, University of Washington, Seattle, WA 98195, USA. Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA. ; Genome Sciences, University of Washington, Seattle, WA 98195, USA. Department of Human Genetics, University of Michigan, Ann Arbor, MI 48109, USA. ; Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA. Howard Hughes Medical Institute, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA. nitin.phadnis@utah.edu hsmalik@fhcrc.org.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26680200" target="_blank"〉PubMed〈/a〉
    Keywords: Alleles ; Animals ; Carrier Proteins/genetics/*physiology ; Cell Cycle/*genetics ; Chimera/genetics ; Crosses, Genetic ; Drosophila melanogaster/*genetics/growth & development ; Drosophila simulans/*genetics/growth & development ; Gene Expression Regulation, Developmental ; Genes, Essential/genetics/physiology ; Genes, Insect ; Genes, Lethal/genetics/*physiology ; *Genetic Speciation ; Male ; Molecular Sequence Data ; *Reproductive Isolation
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 2
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    Pathogenic CD4 T cells in type 1 diabetes recognize epitopes formed by peptide fusion (2016)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2016-02-26
    Description: T cell-mediated destruction of insulin-producing beta cells in the pancreas causes type 1 diabetes (T1D). CD4 T cell responses play a central role in beta cell destruction, but the identity of the epitopes recognized by pathogenic CD4 T cells remains unknown. We found that diabetes-inducing CD4 T cell clones isolated from nonobese diabetic mice recognize epitopes formed by covalent cross-linking of proinsulin peptides to other peptides present in beta cell secretory granules. These hybrid insulin peptides (HIPs) are antigenic for CD4 T cells and can be detected by mass spectrometry in beta cells. CD4 T cells from the residual pancreatic islets of two organ donors who had T1D also recognize HIPs. Autoreactive T cells targeting hybrid peptides may explain how immune tolerance is broken in T1D.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Delong, Thomas -- Wiles, Timothy A -- Baker, Rocky L -- Bradley, Brenda -- Barbour, Gene -- Reisdorph, Richard -- Armstrong, Michael -- Powell, Roger L -- Reisdorph, Nichole -- Kumar, Nitesh -- Elso, Colleen M -- DeNicola, Megan -- Bottino, Rita -- Powers, Alvin C -- Harlan, David M -- Kent, Sally C -- Mannering, Stuart I -- Haskins, Kathryn -- 1K01DK094941/DK/NIDDK NIH HHS/ -- 1R01DK081166/DK/NIDDK NIH HHS/ -- 5U01DK89572/DK/NIDDK NIH HHS/ -- DK104211/DK/NIDDK NIH HHS/ -- New York, N.Y. -- Science. 2016 Feb 12;351(6274):711-4. doi: 10.1126/science.aad2791.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Immunology and Microbiology, University of Colorado School of Medicine, Denver, Anschutz Medical Campus, Aurora, CO 80045, USA. thomas.delong@ucdenver.edu katie.haskins@ucdenver.edu. ; Department of Immunology and Microbiology, University of Colorado School of Medicine, Denver, Anschutz Medical Campus, Aurora, CO 80045, USA. ; Pharmaceutical Sciences, University of Colorado School of Medicine, Aurora, CO 80045, USA. ; Immunology and Diabetes Unit, St. Vincent's Institute of Medical Research, 9 Princes Street, Fitzroy, Victoria 3065, Australia. ; Department of Medicine, Diabetes Division, Diabetes Center of Excellence, University of Massachusetts Medical School, Worcester, MA, USA. ; Institute of Cellular Therapeutics, Allegheny-Singer Research Institute, Allegheny Health Network, Pittsburgh, PA, USA. ; Division of Diabetes, Endocrinology, and Metabolism, Department of Medicine, and Department of Molecular Physiology and Biophysics, Vanderbilt University Medical Center, Nashville, TN, USA. VA Tennessee Valley Healthcare System, Nashville, TN, USA. ; Immunology and Diabetes Unit, St. Vincent's Institute of Medical Research, 9 Princes Street, Fitzroy, Victoria 3065, Australia. University of Melbourne, Department of Medicine, St. Vincent's Hospital, Fitzroy, Victoria 3065, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26912858" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Animals ; C-Peptide/chemistry/*immunology ; CD4-Positive T-Lymphocytes/*immunology ; Clone Cells ; Diabetes Mellitus, Experimental/*immunology/pathology ; Diabetes Mellitus, Type 1/*immunology/pathology ; Epitopes/*immunology ; Immune Tolerance ; Insulin-Secreting Cells/*immunology/pathology ; Mice ; Mice, Inbred NOD ; Molecular Sequence Data ; Peptides/chemistry/immunology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 3
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    Mineralogy and Genesis of the Windjana Sandstone, Kimberley Area, Gale Crater, Mars (2015)
    In:  CASI
    Details
    Publication Date: 2019-07-13
    Description: MSL Curiosity investigated the Windjana sandstone outcrop, in the Kimberley area of Gale Crater, and obtained mineralogical analyses with the CheMin XRD instrument. Windjana is remarkable in containing an abundance of potassium feldspar (and thus K in its bulk chemistry) combined with a low abundance of plagioclase (and low Na/K in its chemistry). The source of this enrichment in K is not clear, but has significant implications for the geology of Gale Crater and of Mars. The high K could be intrinsic to the sediment and imply that the sediment source area (Gale Crater rim) includes K-rich basalts and possibly more evolved rocks derived from alkaline magmas. Alternatively, the high K could be diagenetic and imply that the Gale Crater sediments were altered by K-rich aqueous fluids after deposition.
    Keywords: Geophysics
    Type: JSC-CN-32824 , Lunar and Planetary Science Conference; Mar 16, 2015 - Mar 20, 2015; The Woodlands, TX; United States
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  • 4
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    SAMPEX Observations of the South Atlantic Anomaly Secular Drift During Solar Cycles 22-24 (2017)
    In:  Other Sources
    Details
    Publication Date: 2019-07-13
    Description: It is observed that charged particle intensities are very high near the South Atlantic anomaly (SAA) and are a potential hazard to spacecraft passing through the region. In this study, we examine the secular drift of the SAA location at approximately 400-600 kilometers altitude over nearly two solar cycles, using particle count rates to trace the geomagnetic field lines in the region near the SAA. We use data from the Low-Energy Ion Composition Analyzer sensor on board the SAMPEX (Solar, Anomalous, and Magnetospheric Particle Explorer) spacecraft to measure both the longitudinal and latitudinal drifts of the SAA. We find that the longitudinal drift rate is 0.20 plus or minus 0.04 degrees west per year and that the latitudinal drift rate is 0.11 plus or minus 0.01 degrees south per year. These measurements are compared with the IGRF12 (International Geomagnetic Reference Field) model calculations based on an analysis of magnetic field minima in the region of the SAA. Our results, which are in good agreement with model results and prior measurements when declining spacecraft altitude is taken into account, have important space weather implications.
    Keywords: Geophysics
    Type: GSFC-E-DAA-TN51140 , Space Weather (ISSN 1542-7390) (e-ISSN 1542-7390); 15; 1; 44-52
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  • 5
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    Transient, Small-Scale Field-Aligned Currents in the Plasma Sheet Boundary Layer During Storm Time Substorms (2016)
    In:  Other Sources
    Details
    Publication Date: 2019-07-13
    Description: We report on field-aligned current observations by the four Magnetospheric Multiscale (MMS) spacecraft near the plasma sheet boundary layer (PSBL) during two major substorms on 23 June 2015. Small-scale field-aligned currents were found embedded in fluctuating PSBL flux tubes near the Separatrix region. We resolve, for the first time, short-lived earthward (downward) intense field-aligned current sheets with thicknesses of a few tens of kilometers, which are well below the ion scale, on flux tubes moving equatorward earth ward during outward plasma sheet expansion. They coincide with upward field-aligned electron beams with energies of a few hundred eV. These electrons are most likely due to acceleration associated with a reconnection jet or high-energy ion beam-produced disturbances. The observations highlight coupling of multiscale processes in PSBL as a consequence of magnetotail reconnection.
    Keywords: Geophysics
    Type: GSFC-E-DAA-TN41203 , Geophysical Research Letters (ISSN 0094-8276) (e-ISSN 1944-8007); 43; 10; 4841–4849
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  • 6
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    A Telescopic and Microscopic Examination of Acceleration in the June 2015 Geomagnetic Storm: Magnetospheric Multiscale and Van Allen Probes Study of Substorm Particle Injection (2016)
    In:  Other Sources
    Details
    Publication Date: 2019-07-13
    Description: An active storm period in June 2015 showed that particle injection events seen sequentially by the four (MagnetosphericMultiscale) MMS spacecraft subsequently fed the enhancement of the outer radiation belt observed by Van Allen Probes mission sensors. Several episodes of significant southward interplanetary magnetic field along with a period of high solar wind speed (Vsw 500kms) on 22 June occurred following strong interplanetary shock wave impacts on the magnetosphere. Key events on 22 June 2015 show that the magnetosphere progressed through a sequence of energy-loading and stress-developing states until the entire system suddenly reconfigured at 19:32 UT. Energetic electrons, plasma, and magnetic fields measured by the four MMS spacecraft revealed clear dipolarization front characteristics. It was seen that magnetospheric substorm activity provided a seed electron population as observed by MMS particle sensors as multiple injections and related enhancements in electron flux.
    Keywords: Geophysics
    Type: GSFC-E-DAA-TN40973 , Geophysical Research Letters (ISSN 0094-8276) (e-ISSN 1944-8007); 43; 12; 6051-6059
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  • 7
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    Evaluating GPP and Respiration Estimates over Northern Midlatitude Ecosystems Using Solar-Induced Fluorescence and Atmospheric CO2 Measurements (2018)
    In:  CASI
    Details
    Publication Date: 2019-09-28
    Description: On regional to global scales, few constraints exist on gross primary productivity (GPP) and ecosystem respiration (Re) fluxes. Yet constraints on these fluxes are critical for evaluating and improving terrestrial biosphere models. In this study, we evaluate the seasonal cycle of GPP, Re, and net ecosystem exchange (NEE) produced by four terrestrial biosphere models and FLUXCOM, a datadriven model, over northern midlatitude ecosystems. We evaluate the seasonal cycle of GPP and NEE using solarinduced fluorescence retrieved from the Global Ozone Monitoring Experiment2 and columnaveraged dryair mole fractions of CO2 (XCO2) from the Total Carbon Column Observing Network, respectively. We then infer Re by combining constraints on GPP with constraints on NEE from two flux inversions. An ensemble of optimized Re seasonal cycles is generated using five GPP estimates and two NEE estimates. The optimized Re curves generally show high consistency with each other, with the largest differences due to the magnitude of GPP. We find optimized Re exhibits a systematically broader summer maximum than modeled Re, with values lower during JuneJuly and higher during the fall than Re. Further analysis suggests that the differences could be due to seasonal variations in the carbon use efficiency (possibly due to an ecosystemscale Kok effect) and to seasonal variations in the leaf litter and fine root carbon pool. The results suggest that the inclusion of variable carbon use efficiency for autotrophic respiration and carbon pool dependence for heterotrophic respiration is important for accurately simulating Re.
    Keywords: Geophysics
    Type: GSFC-E-DAA-TN63347 , Journal of Geophysical Research: Biogeosciences (ISSN 2169-8953) (e-ISSN 2169-8961); 123; 9; 2976-2997
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