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  • Female  (7)
  • Biological Physics  (6)
  • Electronic structure and strongly correlated systems  (5)
  • 2015-2019  (15)
  • 2000-2004  (3)
  • 1
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    Incorporating pushing in exclusion-process models of cell migration (2015)
    American Physical Society (APS)
    Details
    Publication Date: 2015-05-27
    Description: Author(s): Christian A. Yates, Andrew Parker, and Ruth E. Baker The macroscale movement behavior of a wide range of isolated migrating cells has been well characterized experimentally. Recently, attention has turned to understanding the behavior of cells in crowded environments. In such scenarios it is possible for cells to interact, inducing neighboring cells t... [Phys. Rev. E 91, 052711] Published Fri May 22, 2015
    Keywords: Biological Physics
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
    Topics: Physics
    Published by American Physical Society (APS)
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  • 2
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    How domain growth is implemented determines the long-term behavior of a cell population through its effect on spatial correlations (2016)
    American Physical Society (APS)
    Details
    Publication Date: 2016-07-15
    Description: Author(s): Robert J. H. Ross, R. E. Baker, and C. A. Yates Domain growth plays an important role in many biological systems, and so the inclusion of domain growth in models of these biological systems is important to understanding how these systems function. In this work we present methods to include the effects of domain growth on the evolution of spatial … [Phys. Rev. E 94, 012408] Published Thu Jul 14, 2016
    Keywords: Biological Physics
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
    Topics: Physics
    Published by American Physical Society (APS)
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  • 3
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    Spin-liquid ground state in the frustrated J_{1} −J_{2} zigzag chain system BaTb_{2} O_{4} (2015)
    American Physical Society (APS)
    Details
    Publication Date: 2015-07-14
    Description: Author(s): A. A. Aczel, L. Li, V. O. Garlea, J.-Q. Yan, F. Weickert, V. S. Zapf, R. Movshovich, M. Jaime, P. J. Baker, V. Keppens, and D. Mandrus We have investigated polycrystalline samples of the zigzag chain system BaTb 2 O 4 with magnetic susceptibility, heat capacity, neutron powder diffraction, and muon spin relaxation ( μ SR ) . No magnetic transitions are observed in the bulk measurements, while neutron diffraction reveals the presence of lo… [Phys. Rev. B 92, 041110(R)] Published Mon Jul 13, 2015
    Keywords: Electronic structure and strongly correlated systems
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
    Published by American Physical Society (APS)
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  • 4
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    Survival probability for a diffusive process on a growing domain (2015)
    American Physical Society (APS)
    Details
    Publication Date: 2015-04-04
    Description: Author(s): Matthew J. Simpson, Jesse A. Sharp, and Ruth E. Baker We consider the motion of a diffusive population on a growing domain, 0〈x〈L(t), which is motivated by various applications in developmental biology. Individuals in the diffusing population, which could represent molecules or cells in a developmental scenario, undergo two different kinds of mot... [Phys. Rev. E 91, 042701] Published Fri Apr 03, 2015
    Keywords: Biological Physics
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
    Topics: Physics
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  • 5
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    One-dimensional mimicking of electronic structure: The case for exponentials (2015)
    American Physical Society (APS)
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    Publication Date: 2015-06-27
    Description: Author(s): Thomas E. Baker, E. Miles Stoudenmire, Lucas O. Wagner, Kieron Burke, and Steven R. White An exponential interaction is constructed so that one-dimensional atoms and chains of atoms mimic the general behavior of their three-dimensional counterparts. Relative to the more commonly used soft-Coulomb interaction, the exponential greatly diminishes the computational time needed for calculatin… [Phys. Rev. B 91, 235141] Published Wed Jun 24, 2015
    Keywords: Electronic structure and strongly correlated systems
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
    Published by American Physical Society (APS)
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  • 6
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    Reconciling transport models across scales: The role of volume exclusion (2015)
    American Physical Society (APS)
    Details
    Publication Date: 2015-10-03
    Description: Author(s): P. R. Taylor, C. A. Yates, M. J. Simpson, and R. E. Baker Diffusive transport is a universal phenomenon, throughout both biological and physical sciences, and models of diffusion are routinely used to interrogate diffusion-driven processes. However, most models neglect to take into account the role of volume exclusion, which can significantly alter diffusi… [Phys. Rev. E 92, 040701(R)] Published Fri Oct 02, 2015
    Keywords: Biological Physics
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
    Topics: Physics
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  • 7
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    Gene expression during the life cycle of Drosophila melanogaster (2002)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2002-09-28
    Description: Molecular genetic studies of Drosophila melanogaster have led to profound advances in understanding the regulation of development. Here we report gene expression patterns for nearly one-third of all Drosophila genes during a complete time course of development. Mutations that eliminate eye or germline tissue were used to further analyze tissue-specific gene expression programs. These studies define major characteristics of the transcriptional programs that underlie the life cycle, compare development in males and females, and show that large-scale gene expression data collected from whole animals can be used to identify genes expressed in particular tissues and organs or genes involved in specific biological and biochemical processes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Arbeitman, Michelle N -- Furlong, Eileen E M -- Imam, Farhad -- Johnson, Eric -- Null, Brian H -- Baker, Bruce S -- Krasnow, Mark A -- Scott, Matthew P -- Davis, Ronald W -- White, Kevin P -- Howard Hughes Medical Institute/ -- New York, N.Y. -- Science. 2002 Sep 27;297(5590):2270-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biological Sciences, Stanford University, Stanford, CA 94305, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12351791" target="_blank"〉PubMed〈/a〉
    Keywords: Algorithms ; Animals ; Cluster Analysis ; Drosophila Proteins/genetics/physiology ; Drosophila melanogaster/embryology/*genetics/*growth & development ; Embryo, Nonmammalian/physiology ; Female ; *Gene Expression ; Gene Expression Profiling ; Gene Expression Regulation, Developmental ; *Genes, Insect ; Germ Cells/physiology ; Larva/genetics ; Life Cycle Stages/*genetics ; Male ; Oligonucleotide Array Sequence Analysis ; Organ Specificity ; Pupa/genetics ; RNA, Messenger/genetics/metabolism ; Sex Characteristics ; Transcription, Genetic
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
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    Linkage of plasma Abeta42 to a quantitative locus on chromosome 10 in late-onset Alzheimer's disease pedigrees (2000)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2000-12-23
    Description: Plasma Abeta42 (amyloid beta42 peptide) is invariably elevated in early-onset familial Alzheimer's disease (AD), and it is also increased in the first-degree relatives of patients with typical late-onset AD (LOAD). To detect LOAD loci that increase Abeta42, we used plasma Abeta42 as a surrogate trait and performed linkage analysis on extended AD pedigrees identified through a LOAD patient with extremely high plasma Abeta. Here, we report linkage to chromosome 10 with a maximal lod score of 3.93 at 81 centimorgans close to D10S1225. Remarkably, linkage to the same region was obtained independently in a genome-wide screen of LOAD sibling pairs. These results provide strong evidence for a novel LOAD locus on chromosome 10 that acts to increase Abeta.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ertekin-Taner, N -- Graff-Radford, N -- Younkin, L H -- Eckman, C -- Baker, M -- Adamson, J -- Ronald, J -- Blangero, J -- Hutton, M -- Younkin, S G -- AG06656/AG/NIA NIH HHS/ -- MH59490/MH/NIMH NIH HHS/ -- P50 AG16574/AG/NIA NIH HHS/ -- New York, N.Y. -- Science. 2000 Dec 22;290(5500):2303-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Mayo Clinic Jacksonville, Jacksonville, FL 32224, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11125143" target="_blank"〉PubMed〈/a〉
    Keywords: Adult ; Age of Onset ; Aged ; Aged, 80 and over ; Alzheimer Disease/*blood/*genetics ; Amyloid beta-Peptides/*blood/genetics ; Chromosomes, Human, Pair 10/*genetics ; Female ; *Genetic Linkage ; Genetic Markers ; Genetic Predisposition to Disease ; Humans ; Lod Score ; Male ; Middle Aged ; Pedigree ; Peptide Fragments/*blood/genetics ; Phenotype ; *Quantitative Trait, Heritable
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 9
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    Matriarchs as repositories of social knowledge in African elephants (2001)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2001-04-21
    Description: Despite widespread interest in the evolution of social intelligence, little is known about how wild animals acquire and store information about social companions or whether individuals possessing enhanced social knowledge derive biological fitness benefits. Using playback experiments on African elephants (Loxodonta africana), we demonstrated that the possession of enhanced discriminatory abilities by the oldest individual in a group can influence the social knowledge of the group as a whole. These superior abilities for social discrimination may result in higher per capita reproductive success for female groups led by older individuals. Our findings imply that the removal of older, more experienced individuals, which are often targets for hunters because of their large size, could have serious consequences for endangered populations of advanced social mammals such as elephants and whales.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉McComb, K -- Moss, C -- Durant, S M -- Baker, L -- Sayialel, S -- New York, N.Y. -- Science. 2001 Apr 20;292(5516):491-4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Experimental Psychology, School of Biological Sciences, University of Sussex, Brighton BN1 9QG, UK. karenm@biols.susx.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/11313492" target="_blank"〉PubMed〈/a〉
    Keywords: *Aging ; Animals ; *Behavior, Animal ; Biological Evolution ; Conservation of Natural Resources ; *Discrimination (Psychology) ; *Elephants/physiology ; Exploratory Behavior ; Female ; Kenya ; Reproduction ; Social Behavior ; *Vocalization, Animal
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 10
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    Filling the gaps: A robust description of adhesive birth-death-movement processes (2016)
    American Physical Society (APS)
    Details
    Publication Date: 2016-04-22
    Description: Author(s): Stuart T. Johnston, Ruth E. Baker, and Matthew J. Simpson Existing continuum descriptions of discrete adhesive birth-death-movement processes provide accurate predictions of the average discrete behavior for limited parameter regimes. Here we present an alternative continuum description in terms of the dynamics of groups of contiguous occupied and vacant l… [Phys. Rev. E 93, 042413] Published Thu Apr 21, 2016
    Keywords: Biological Physics
    Print ISSN: 1539-3755
    Electronic ISSN: 1550-2376
    Topics: Physics
    Published by American Physical Society (APS)
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