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  • 1
    Publication Date: 2021-07-16
    Description: Shrimp production increasing rapidly in the world and in2013 the production reaches 4.2 MT. In Iran the shrimp production is under development and estimated in 1393, 20 thousand tons produced. In this regards the important subject is health and disease in shrimp farm. The white spot syndrome virus for second time appears in chabahar and damage many farms. Because the aquaculture activity expand in the world in national, regional and international scale, many emerge disease are endanger. In this regard the viral disease is very important and not only decrease the production but also has a side effect in business and national economy. For control and prevention the viral disease, the accurate methods such as PCR kit were developed. In this project the PCR methods with sensitivity, specificity and efficacy was designed and used for detection viral disease. Many viruses have several serotypes and in different area maybe new serotype induce the disease. For this reason, the specific kit will be design. Three viruses consist of MBV, TSV and IHHNV are very pathogenic in shrimp farm and need the specific PCR kit for detection them. In this project the MBV virus was identified and designs a new primer with Oligo software and the primer amplified a part of DNA with 185 bp in the gel. The specificity and sensitivity of primer were checked by IQ2000 Kit and the primer used for detection unknown samples.
    Keywords: Aquaculture ; Health ; Iran ; Identification ; Virus ; Kit detection ; New molecular methods ; Aquatic ; TSV ; HPV ; MBV
    Repository Name: AquaDocs
    Type: monograph
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    Format: 72
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  • 2
    Publication Date: 2021-07-16
    Description: In order to do this study, 150 Persian sturgeon having 75g mean weight transferred to tanks with 500L volume. After dividing the fishes into two groups (experimental and control group), the fingerlings fed by concentrate food that contained different levels of Zataria multiflora essential oil (15g/kg, 25g/kg, 50g/kg, 100g/kg) for 8 weeks. Finally, sampling carried out on blood and serum of fishes. After preparing the samples based on standard methods, haematology and serology studies, performed. The results showed significant difference in mean and standard deviation of monocytes between experimental and control groups (P〈0.05). In treatment 25g/kg, monocyte count was more than other treatments. But there are no significant differences in mean and standard deviation of other white blood cells. The results of serologic studies showed no significant differences in serum indices (C3, C4 and total protein) (P〈0.05), but there is significant difference in mean and standard deviation of albumin. So that , the mean and standard deviation in treatments 15g/kg and 25g/kg and control group were more than treatments 50g/kg and 100g/kg of Zataria multiflora essential oil. Also , this is the first record of the anesthetic effect of Zataria multiflora essence on fish. In this research the effect of 50 and 100 ppm concentrations of Zataria multiflora essence on the rainbow trout (Oncorhynchus mykiss) fry with average weight of 15±2 grams and Salmo trutta caspius with average weight of 40±4 grams has been studied. In this research the water temperature was 16-17 ºC, dissolved oxygen 7±0.2 and pH═8. The average time of coming to unconscious in 50 ppm and 100 ppm concentration in both Oncorhyncus mykiss and Salmo trutta caspius was 3 and 2 minutes respectively; and the means of balance and return of anesthesia were 2 and 3 minutes respectively, and the average time of inducing balance and recovering consciousness was 2 and 3 minutes respectively. Moreover, in contrast there is a significant difference between the time of inducing unconsciousness and recovery in all kinds of fish (p 〈 0.0001). The fish anesthetized with 100 ppm concentration after transference to water without Zataria multiflora essence were calm for 30 minutes and showed no reaction to weak stimuli (such as touching). In regard of the time of falling into unconsciousness and the time of recovery by different degrees of concentration of Zataria multiflora essence there is no significant difference between Oncorhyncus mykiss and Salmo trutta caspius (p 〉 0.05). This research also shows that Zataria multiflora essence has an anesthetic effect but because of its unwanted severe irreparable breathing (respiration) side effects and also the deformation of the fish which is against the fisheries’ ethics (death accompanied with extreme pain) it would be better not to be used as anesthetics. One of the advantages of Zataria multiflora essence as anesthetics is its low concentration (25 ppm) for anesthetizing the fish and also its economical cost. In addition, this essence has antimicrobial and disinfecting effects and, therefore, it can remove the infection from the external surface of the body of the fish. One of the most noticeable defects of Zataria multiflora essence is that at the time of anesthetizing it causes a state of excitement and irritability in the fish which manifests itself in the speed of swimming and the possibility of jumping out of water. As a result, although Zataria multiflora essence has anesthetizing effects, it is recommended not to be used for anaesthetizing the fish, because it posses unwanted side effects that may even cause the death of the fish; however, it may be used as a sedative during manipulating the fish.
    Keywords: Aquaculture ; Health ; Iran ; Zataria multiflora ; Essential oils ; Persian Sturgeon ; Trout ; Zataria multiflora
    Repository Name: AquaDocs
    Type: monograph
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  • 3
    Publication Date: 2021-07-16
    Description: Study on Viral Nervouse necrosis (isolation, characterisation and pathogenesis) in Golden grey mullet in the Caspian Sea and study of pathogenecity and possibility of transmission to the other fish species (Sturgeon fishes, Rutilus frisii kutum and reared Rainbow trout and Carp) Viral Nervous Necrosis (VNN) is a worldwide disease affecting several species of cultured marine fish. For the past two decades, betanodavirus infections that cause Viral Nervous Necrosis (VNN) have emerged as major constraints on the culture and sea ranching of marine fish in almost all parts of the world. More than forty species mainly of marine origin have been so far affected and this number is likely to rise in future following the introduction of new species and the increase of aquaculture trade. Unknown acute mortality occurred in wild golden grey mullet Lisa auratus and Liza saliens in Iranian waters of Caspian Sea in recent years. In order to isolation and confirmation of causative agents of golden grey mullet mortality in the Caspian Sea, a complementary research investigation project was designed in 2005 and approved immediately in Iranian Fisheries Research Organization (IFRO). Many diagnostic aspects such as Virology (Cell culture and Elctereone Microscopy), Hemathology, Bacteriology, Histopathology, Molecular biology (NestedRT-PCR), Heavy metals measuerment and Serology (IFAT and IHC) were employed in mentioned multidiciplinary project. About 322 moribund fish samples which revealed skin darkening, erratic swimming behavior such as spiral and belly-up at rest and high distention of swimming bladder. Suspected samples were collected from coastal capture sites in iranian north proviences in 2006 till 2009. Targets tissue such as brain and eye were removed in strile condition and then kept in -80oC frezzer for cell culture and Nested-RT-PCR. Other tissue samples from liver, kidney, intestine, stomach, gill, skin and muscle, gall bladder and gonads were taken and fixed in 10% buffer formalin and same parts fixed in glutaraldehyde 3% for histopathology, IHC and EM respectively. Cytopathic effect (CPE) was observed in those cell cultures just six days after inoculation with the dilutions of the tested 312 homogenate supernatants. CPE in monolayers of cells cultured (SSN-1 cell line) was characterised by thin or rounded, refractile, granular cells with vacuoles. Nine samples were positive in virology assay. Nested- RT-PCR was done on suspected tissue samples and supernatant of CPE positive samples and 21 tissue samples and all CPE positive samples were positive. IFAT was selected as a confirmatory method for identifying viral strains replicating on cell cultures and carried out with rabbit anti-betanodavirus serum on suspected tissue samples and some smears of CPE positive samples. Some bright points approved betanodavirus antigen and confirmed cell culture and Nested-RT-PCR findings. In fixed tissue samples widespread and massive vacuolation were observed in brain, spinal cord, retina and optical nerve. In order to confirmation of diagnostic findings , IHC was done with monoclonal antibody antibetanodavirus and some red-brown points were observed. Theses findings revealed expected viral antigens and confirmed previous results. Moreover, virus particles with 25-30 nm in diameter were visualized in infected brain and retina using positive staining in TEM. Also pathogenicity test was employed to confirm the obtained results. So Guppy fish Poecilia reticulata and sturgeon fry were used instead of the experimental host due to ease of handling and susceptibility. After 15 days post infection, guppy bathed in VNN-infected tissue culture with 104 TCID50 showed clinical signs similar to naturally infected Golden grey mullet, and the mortality rate reached up to 100% in 75 dpi. When target organs were examined by cell culture isolation, serology, and histopathology, all revealed the presence of virus in the Guppy. Suspected supernatant injected to sturgeon fry through intravitreous injection and widespread vacuolation were observed in brain and spinal cord buy IHC and Real time PCR were negative. In conclusion, with attntion to obtained results in this investigation such as ecological factors, clinical signs, histopathological, virological and bacteriological results, molecular analysis, (IHC, IFAT, PCR), TEM demonstration, serological and hematological findings, it could be confirmed that VNNV was the main causative agent for disease outbreak in Golden grey mullet in Southern coastline of Caspian Sea.
    Keywords: Aquaculture ; Health ; Iran ; Caspian Sea ; Viral nervous necrosis ; Golden grey mullet ; Liza aurata ; Liza saliens ; Histopathology ; Virology ; Bacteriology ; IHC ; IFAT ; PCR ; TEM ; Species ; Sturgeon ; Rutilus frisii kutum ; Rainbow trout ; Carp
    Repository Name: AquaDocs
    Type: monograph
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    Format: 184
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  • 4
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    Iranian Fisheries Science Research Institute | Tehran, Iran
    In:  http://aquaticcommons.org/id/eprint/25652 | 18721 | 2018-10-08 08:43:54 | 25652 | Iranian Fisheries Science Research Institute
    Publication Date: 2021-07-16
    Description: For the first time white spot disease (WSD) was reported in shrimp farms of khoozestan province, in southwest of IRAN in 2002. Then in 2005 the neighbor province, boushehr, was contaminated. In 2008 WSD outbreak reported in sistan-bloochestan province in southeast of Iran. In 2015 all of southern shrimp farms of country except Hormozgan, the middle southern province, which has remained free of WSD, are being contaminated. White Spot disease suspended shrimp culture in thousands hectares of shrimp farms. Considering that white spot disease has not been observed in Hormozgan province yet, the question is; to what extent environmental and management factors participated in preventing WSD outbreak or cause WSD outbreak. In this study (20102012), the effects of environmental factors and management, stressors that decrease immune system function of shrimp are discussed. In addition, the role of pathogen as the main factor of outbreak is discussed. The goal of this study is to define environmental parameters and management practices associates with outbreak of white spot disease in affected provinces and discover reasons of being Hormozgan province free of this disease. In this study the role of the local environmental factors and management practice stressors in susceptibility to WSD was determine. Both the effects of environmental factors in water of ponds including total ammonia, nitrogen, dissolved oxygen, pH, salinity, transparency, and temperature and management issues related to biosecurity are studied. There were overlaps on physical and chemical parameter values obtained in clear areas with contaminated areas .Results of the data analysis suggest that lack of association with WSD incidence was 7 times greater than WSD incidence despite of disease outbreak in sistan-bloochestan province, so other sources of white spot disease virus incidence was suspected in affected areas. Histopathological examinations and polymerase chain reaction (PCR) tests during project performance did not reveal white spot disease virus evidences in post larvae examined from khoozestan province stocked in farms but disease outbreak was happened in that farms , so we suspected to management practice include feed , pond preparation and carrier of disease. Recorded values of temperature and salinity in some months during inspection in Hormozgan province specified stressful condition that may lead to WSD outbreak, however the disease did not appear. Therefore the hypothesis that the water physical and chemical conditions are reasons to prevent disease outbreak in Hormozgan province is being rejected. The policy of Hormozgan’s fishery authorities, to replaced Fenneropenaeus indicus with specific pathogen free Litopenaeus vannamei, that is more resistant to some of diseases, before incidence of WSD in farms and to before being endemic in the Hormozgan province, made an advantage compare to affected southern provinces that introduced Litopenaeus vannamei after WSD prevalence to their farms. However it does not guarantee to maintain current trend of being Hormozgan province farms free of white spot disease. Therefore establishing the principals of biosecurity are strongly emphasized. Strategies taken by the proficient authorities in preparation of SPF shrimp broodstock can be the most important factor in preventing WSD. Regarding biosecurity principals purchased feed must be free of shrimp head powder. Construction the new shrimp farms should be as far as it could be away from contaminated areas.
    Keywords: Aquaculture ; Ecology ; Health ; Iran ; Khouzestan Province ; Boushehr province ; Sistan and Balochestan province ; Hormozgan Province ; Epidemiological study ; WSD ; Fenneropenaeus indicus ; Penaeus vannamei ; Shrimp ; White Spot Disease ; Temperature ; Salinity ; PCR ; Polymerase Chain Reaction ; Ammonia ; Nitrogen ; Dissolved oxygen ; pH ; Transparency
    Repository Name: AquaDocs
    Type: monograph
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    Format: 468
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  • 5
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    University of Liverpool | Liverpool, UK
    In:  dis@fba.org.uk | http://aquaticcommons.org/id/eprint/11002 | 1256 | 2013-03-26 13:47:03 | 11002 | Environment Agency, UK (Freshwater Biological Association)
    Publication Date: 2021-06-26
    Description: This is the Limnological survey of the Cheshire, Shropshire, and Staffordshire Meres: Interim data report produced by the University of Liverpool in 1992. This report looks at the Limnological survey data from Cheshire, Shropshire and Staffordshire Meres. Limnological data of the report covers: changes in water conductivity, Phenolphthalein Alkalinity, Total Alkalinity, pH, Chloride concentrations, Soluble reactive Phosphorus, Total Phosphorus, Nitrate Nitrogen, Ammonium Nitrogen, Silicate, Chlorophyll, Carotenoids, Secci disk depth, changes in Trophic Score, changes in DAFOR scores for submerged and floating plants and Oxygen saturation during summer. This report also contains Seasonal maps of different Meres. The more important limnological data are plotted as seasonal means in relation to the sampling sites. Conductivity is shown as μSiemens per cm, alkalinity as milliequivalents per litre. Total and soluble reactive (available inorganic) phosphorus are shown in terms of P in μg per litre. Nitrate and ammonium are shown in terms of N in mg per litre. Chlorophyll a is given as μg per litre. A profile of oxygen saturation is shown. These profiles were obtained towards the middle of the day in August and September.
    Description: Environment Agency Archives North West
    Keywords: Fisheries ; Limnology ; Management ; England ; Cheshire Mere ; Shropshire Mere ; Staffordshire Mere ; Inland waters ; Limnology ; Limnological survey ; DAFOR scores ; Trophic scores ; Water quality
    Repository Name: AquaDocs
    Type: monograph
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    Format: 58
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  • 6
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    Texas Water Quality Board | Austin, TX
    In:  http://aquaticcommons.org/id/eprint/14162 | 9596 | 2020-08-31 20:23:31 | 14162 | Galveston Bay Information Collection
    Publication Date: 2021-06-24
    Description: The Houston Ship Channel is an area of intense interest with respect to water water quality. Frequent inquiries regarding its condition are received from diverse groups including industries, concerned citizens, environmental groups, school teachers, and students. In order to provide current and accurate information, the Water Quality Board is publishing herein water quality and biological data collected during the period July 1973 through June 1974. This information provides a fairly complete picture of the range of variation that is seen in Channel quality. The locations of all Water Quality Board monitoring stations, and of major industrial and municipal discharges, is given in Table I. Data from five representative sampling stations between Morgan's Point (Mile 0) and the Turning Basin (Mile 25), are sufficient to illustrate general conditions in the Ship Channel. Table II contains field measurements and laboratory results for water samples collected at depth of one foot (surface) and 40 feet. All values are expressed as milligrams/liter, essentially equivalent to parts/million, with the following exceptions: temperature (oF), pH (pH units), turbidity (Jackson Turbidity Units), conductivity (micromhs/cm), and coliform bacteria (Number/100 milliliters). The heavy metals results in Table III are based on samples collected by composting water from the surface to the bottom. Plankton samples (Table IV) were collected at or near each of the five stations. Nekton, the animals that are larger and stronger swimmers than plankton, were collected at the intake screens of Diamond Shamrock, Deer Park Plant, and Houston Lighting and Power Company, Deepwater Plant (Table V). It is important to realize that the Houston Ship Channel is a dynamic estuarine system. At no time will precisely the same conditions prevail that were previously found at the same location. The dissolved oxygen concentration may be the same as it was yesterday, for instance, but never will the combination of temperature, conductivity, pH, and all other parameters be the same.
    Keywords: Conservation ; Limnology ; Management ; monitoring program ; water quality
    Repository Name: AquaDocs
    Type: monograph
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    Format: application/pdf
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  • 7
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    National Rivers Authority | Bristol, UK
    In:  dis@fba.org.uk | http://aquaticcommons.org/id/eprint/10982 | 1256 | 2013-03-26 13:51:31 | 10982 | Environment Agency, UK (Freshwater Biological Association)
    Publication Date: 2021-06-25
    Description: This is the report on Lakes – Classification and Monitoring, a strategy for the classification of lakes by the National Rivers Authority.This report describes a scheme for the assessment and monitoring of water and ecological quality in standing waters, greater than about 1ha in area, in England and Wales although it is generally relevant to Northwest Europe. Thirteen hydrological, chemical and biological variables are used to characterize the standing water body in any current sampling. Statistical testing on the chemical variables showed that at least six samples during a year would be needed to produce a representative sampling mean; but in this scheme the choice of variables minimizes logistic cost by not using boat sampling and time costs by not demanding extensive taxonomic work. Standing waters are classified in a state-changed system in which the contemporary values of the variables are compared with a reference baseline state and then placed in categories of percentage change from this baseline. The scheme is presently designed for use at about five year intervals on all lakes greater than 2ha area plus additional lakes of significant amenity or conservation interest.
    Description: Environment Agency Archives North West
    Keywords: Fisheries ; Limnology ; Management ; England ; Wales ; Lake classification ; Monitoring ; Eutrophication ; Acidification ; Infilling ; Water quality ; Ecological quality ; State-changed schemes ; Export coefficient models ; Nutrients ; Aquatic plants
    Repository Name: AquaDocs
    Type: monograph
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  • 8
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    In:  http://aquaticcommons.org/id/eprint/14822 | 8 | 2014-12-10 22:52:53 | 14822
    Publication Date: 2021-06-25
    Description: A distinct, 1- to 2-cm-thick flood deposit found in Santa Barbara Basin with a varve-date of 1605 AD ± 5 years testifies to an intensity of precipitation that remains unmatched for later periods when historical or instrumental records can be compared against the varve record. The 1605 AD ± 5 event correlates well with Enzel's (1992) finding of a Silver Lake playa perennial lake at the terminus of the Mojave River (carbon-14-dated 1560 AD ± 90 years), in relative proximity to the rainfall catchment area draining into Santa Barbara Basin. According to Enzel, such a persistent flooding of the Silver Lake playa occurred only once during the last 3,500 years and required a sequence of floods, each comparable in magnitude to the largest floods in the modern record. To gain confidence in dating of the 1605 AD ± 5 event, we compare Southern California's sedimentary evidence against historical reports and multi-proxy time-series that indicate unusual climatic events or are sensitive to changes in large-scale atmospheric circulation patterns. The emerging pattern supports previous suggestions that the first decade of the 17th century was marked by a rapid cooling of the Northern Hemisphere, with some indications for global coverage. A burst of volcanism and the occurrence of El Nino seem to have contributed to the severity of the events. The synopsis of the 1605 AD ± 5 years flood deposit in Santa Barbara Basin, the substantial freshwater body at Silver Lake playa, and much additional paleoclimatic, global evidence testifiesfor an equatorward shift of global wind patterns as the world experienced an interval of rapid, intense, and widespread cooling.
    Keywords: Atmospheric Sciences ; Earth Sciences ; Limnology ; Oceanography ; PACLIM ; dendrochronology
    Repository Name: AquaDocs
    Type: conference_item
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    Format: 39-62
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  • 9
    Publication Date: 2021-07-05
    Description: Upland stream systems have been extensively investigated in Europe, North America and Australasia and many of the central ideas concerning their function are based on these systems. One central paradigm, the river continuum concept is ultimately derived from those North American streams whose catchments remain forested with native vegetation. Streams of the tropics may or may not fit the model. They have been little studied. The Amani Nature Reserve in the East Usambara Mountains of north-eastern Tanzania offers an opportunity to bring these naturally forested systems to the attention of the ecological community. This article describes a comparison made between two lengths of the River Dodwe in this area. The work was carried out by a group of postgraduate students from eighteen European and African countries with advice from five staff members, as part of a course organised by the Tropical Biology Association. Rigorous efforts were made to standardise techniques, in a situation where equipment and laboratory facilities were very basic, through a management structure and deliberate allocation of work to specialists in each area.The article offers a summary of invertebrate communities found in the stream and its biomass. Crabs seem to be the key organism in both sections of the streams.
    Keywords: Ecology ; Limnology ; Freshwater crustaceans ; Taxonomy ; Biomass ; Rivers ; Flood plains ; Site surveys ; Tanzania ; River Dodwe
    Repository Name: AquaDocs
    Type: article , FALSE
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    Format: application/pdf
    Format: 27-47
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  • 10
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    Freshwater Biological Association | Windermere, UK
    In:  http://aquaticcommons.org/id/eprint/4845 | 1256 | 2011-09-29 15:49:33 | 4845 | Freshwater Biological Association
    Publication Date: 2021-07-06
    Description: The connection between the activity of the gonadotropic cells of the hypophysis and the neurosecretion in the pre-optico neuro-hypophysial system in different groups of vertebrates has been examined by many authors. It has been established that in many species there exists some kind of synchronism between the sexual cycle and the cellular activity of neurosecretion, a fact that has led to the prevailing idea that gonadotropic activity in the hypophysis is regulated by the hypothalamus. This paper summarises the results of experiments made in this direction on Cyclostomata. The materials for research came from adult individuals of Eudontomyson danfordi Regan taken from the rivers Somes-Rece and Ivo (Harghita district) at different times of the year.
    Description: Translated from Romanian into English
    Keywords: Biology ; Ecology ; Limnology ; Freshwater fish ; Histology ; Cytology ; Secretion ; Staining
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
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