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  • Inorganic Chemistry  (83,671)
  • Cell & Developmental Biology  (25,032)
  • 42.74
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  • 1
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    Frontiers Media SA
    Publication Date: 2024-04-04
    Description: The Frontiers in Chemistry Editorial Office team are delighted to present the inaugural “Frontiers in Chemistry: Rising Stars” article collection, showcasing the high-quality work of internationally recognized researchers in the early stages of their independent careers. All Rising Star researchers featured within this collection were individually nominated by the Journal’s Chief Editors in recognition of their potential to influence the future directions in their respective fields. The work presented here highlights the diversity of research performed across the entire breadth of the chemical sciences, and presents advances in theory, experiment and methodology with applications to compelling problems. This Editorial features the corresponding author(s) of each paper published within this important collection, ordered by section alphabetically, highlighting them as the great researchers of the future. The Frontiers in Chemistry Editorial Office team would like to thank each researcher who contributed their work to this collection. We would also like to personally thank our Chief Editors for their exemplary leadership of this article collection; their strong support and passion for this important, community-driven collection has ensured its success and global impact.
    Keywords: Green and Sustainable Chemistry ; Analytical Chemistry ; Theoretical and Computational Chemistry ; Polymer Chemistry ; Medicinal and Pharmaceutical Chemistry ; Organic Chemistry ; Nanoscience ; Catalysis and Photocatalysis ; Supramolecular Chemistry ; Electrochemistry ; Inorganic Chemistry ; Chemical Biology ; thema EDItEUR::P Mathematics and Science::PD Science: general issues
    Language: English
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  • 2
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2017-02-10
    Description: Author: Jake Yeston
    Keywords: Inorganic Chemistry
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 3
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2017-01-27
    Description: Author: Jake Yeston
    Keywords: Inorganic Chemistry
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 4
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2017-01-27
    Description: Polynitrogens have the potential for ultrahigh-performing explosives or propellants because singly or doubly bonded polynitrogens can decompose to triply bonded dinitrogen (N2) with an extraordinarily large energy release. The large energy content and relatively low activation energy toward decomposition makes the synthesis of a stable polynitrogen allotrope an extraordinary challenge. Many elements exist in different forms (allotropes)—for example, carbon can exist as graphite, diamond, buckyballs, or graphene. However, no stable neutral allotropes are known for nitrogen, and only two stable homonuclear polynitrogen ions had been isolated until now—namely, the N3− anion (1) and the N5+ cation (2). On page 374 of this issue, Zhang et al. (3) report the synthesis and characterization of the first stable salt of the cyclo-N5− anion, only the third stable homonuclear polynitrogen ion ever isolated. Author: Karl O. Christe
    Keywords: Inorganic Chemistry
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 5
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2016-09-09
    Description: Author: Jake Yeston
    Keywords: Inorganic Chemistry
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2016-11-11
    Description: Author: Jake Yeston
    Keywords: Inorganic Chemistry
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 7
    Publication Date: 2015-11-07
    Description: The earliest known crabs are of Early and Middle Jurassic age; in general, they are rare. Here we describe a new species of homolodromioid from the late Bathonian of Sarthe (France), based on a single dorsal carapace, Tanidromites raboeufi n. sp. This specimen has mostly well-preserved cuticle, and shows two episkeletozoans (bryozoan colonies) on its dorsal side, which is unique amongst early brachyurans (Early and Middle Jurassic). These bryozoans are identified as juvenile colonies of the morphogenus Berenicea (sheet-like tubuluporines), typical encrusters of hard substrates. Their presence directly on the carapace crab shows that they were closely cohabitating with this early brachyuran in its palaeoenvironment. One of these colonies appears to have attached to the internal carapace surface, indicative of post-mortem settlement and growth. Colony sizes suggest a growth phase of at least several months on the sea floor, implying a certain resistance to decomposition of the crab carapace. This is of note in the light of extant homolodromioids which are known to have extremely fragile carapaces. This association demonstrates that post-mortem associations may yield palaeoecological insights into both substrate and colonising organisms.
    Keywords: Bathonian ; cyclostome bryozoans ; epibiosis ; episkeletozoans ; Homolodromioidea ; 38.22 ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
    Type: Article / Letter to the editor
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  • 8
    Publication Date: 2016-05-06
    Description: All squat lobsters of the families Galatheidae, Munididae and Munidopsidae from the Miocene of the Central Paratethys are reviewed taxonomically. Based on additional observations emended diagnoses are provided for Agononida cerovensis and Galathea weinfurteri, from the Lower and Middle Miocene, respectively. Munidopsis is represented by two species in the study area; additional data for M. lieskovensis from the Lower Miocene of Slovakia are presented and a new species, M. palmuelleri, from the Middle Miocene of Slovenia is erected. Implications for palaeoenvironmental reconstructions are briefly discussed for each taxon.
    Keywords: Neogene ; Austria ; Slovakia ; revision ; new species ; 42.74 ; 38.22
    Repository Name: National Museum of Natural History, Netherlands
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  • 9
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    In:  Various articles (0007-4977) vol.91 (2015) nr.2 p.205
    Publication Date: 2016-08-18
    Keywords: gall crab ; Opecarcinus hypostegus ; Curaçaoan reef ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
    Type: Article / Letter to the editor
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  • 10
    Publication Date: 2016-08-18
    Description: A new species of gall crab is described from the free-living stony coral Trachyphyllia geoffroyi. Specimens were collected during field work in Lembeh Strait (Indonesia) and of Kudat (Malaysian Borneo). This new species, here named Lithoscaptus semperi sp. n., is the ninth species assigned to the genus. It can be separated from its congeners by not having the internal orbital angle extending beyond the external orbital angle, and by the stout female P2 merus with prominent distomesial projection. In addition, the carapace surface appears smooth, despite having small tubercles on the anterior half, and is without noticeable spines, other than those on the frontal margin. The distinctive carapace pattern in life is a diagnostic character in male specimens.
    Keywords: Cospeciation ; host specificity ; Indonesia ; Malaysia ; Thoracotremata ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 11
    Publication Date: 2015-12-07
    Description: The emergence of king crabs from a hermit crab-like ancestor is one of the most curious events in decapod evolution. King crabs comprise two taxa, Lithodidae and Hapalogastridae, and while lithodids have formed the focus of various anatomical studies, the internal anatomy of hapalogastrids has never been studied although this group might represent a more ancestral morphological condition within king crabs than lithodids do. To better understand the evolutionary transformation of pagurid-like hermit crabs into king crabs, we studied the hemolymph vascular system and associated organs of representatives of Hapalogaster and present here the first micro-computer tomography data pertaining to the internal anatomy of hapalogastrids. Our results for Hapalogastridae are compared with existing and new data on Paguridae and Lithodidae and are discussed in the light of the process of carcinization or evolutionary transformation into a crab-like habitus. Hapalogaster resembles both pagurids on the one hand and lithodids on the other, not only with regard to external morphological characters but also in terms of certain internal anatomical features. In this and other respects, Hapalogaster represents an evolutionary intermediate form that connects pagurids and lithodids.
    Keywords: Anomala ; carcinization ; circulatory system ; evolutionary morphology ; structural coherence ; variability ; 42.74 ; 38.22 ; 42.62
    Repository Name: National Museum of Natural History, Netherlands
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  • 12
    Publication Date: 2015-10-27
    Description: The centipedes of the clade Epimorpha change slightly during post-embryonic growth but there is huge variation between species in the maximum body size. New specimens of the rarely collected Neotropical genus Dinogeophilus provide further evidence that this genus comprises the smallest species of the Epimorpha, with a recorded maximum length of 5.5 mm. Up to now Dinogeophilus has been invariantly classified in Geophilidae but different sources of evidence (examination by SEM, cladistic evaluation of morphology, similarity and phylogenetic analysis of molecular data) agree on a very different phylogenetic hypothesis: Dinogeophilus is actually a derived lineage of Schendylidae, only distantly related to Geophilidae, and possibly belong to a mainly Neotropical subgroup of schendylids. A comparison of Dinogeophilus with the most closely related taxa suggests that body miniaturization was accompanied by possibly paedomorphic traits, including lower number of some multiple elements (antennal sensilla, processes on the mouth-parts, coxal organs) and shorter setae. Possibly associated with miniaturization are also a few novel features of Dinogeophilus, among which the unique subterminal denticles of the forcipules, suggesting a possible change in the feeding behaviour.
    Keywords: Geophilidae ; miniaturization ; molecular phylogeny ; paedomorphosis ; Schendylidae ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 13
    Publication Date: 2016-08-18
    Description: A new species of cryptochirid crab, Fizesereneia panda van der Meij, is described and illustrated based on specimens collected from the scleractinian corals Lobophyllia cf. hemprichii and L. cf. corymbosa from the Farasan Banks, Farasan Islands, and the reefs off Thuwal in the Saudi Arabian Red Sea, and from Symphyllia recta from reefs in the Gulf of Oman. This is the second cryptochirid species with the Red Sea as type locality. It can be separated from its congeners by the subrectangular carapace, raised midline and the complete division of the carapace depressions, and reddish black colour pattern of these concavities in live specimens. This new species is the seventh assigned to Fizesereneia. A DNA barcode for the new species has been deposited in GenBank.
    Keywords: DNA barcoding ; gall crabs ; host specificity ; Lobophylliidae ; Saudi Arabia ; Scleractinia ; taxonomy ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 14
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    In:  Various articles (1445-5226) vol.28 (2014) p.491
    Publication Date: 2016-08-18
    Description: The enigmatic gall crab family Cryptochiridae has been proposed to be phylogenetically derived from within the Grapsidae (subsection Thoracotremata), based on the analysis of 16S mtDNA of one cryptochirid, Hapalocarcinus marsupialis, among a wide array of thoracotremes, including 12 species of the family Grapsidae. Here,wetest the monophyly and phylogenetic position of Cryptochiridae using the same gene, but with an extended representation of cryptochirids spanning nine species in eight of 21 genera, in addition to further thoracotreme representatives. The results show that gall crabs form a highly supported monophyletic clade within the Thoracotremata, which evolved independently of grapsid crabs. Therefore, the Cryptochiridae should not be considered as highly modified Grapsidae, but as an independent lineage of Thoracotremata, deserving its current family rank. Further molecular and morphological studies are needed to elucidate the precise placement of the cryptochirids within the Eubrachyura.
    Keywords: 16S mtDNA ; coral-associated organisms ; evolutionary origin ; superfamily ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 15
    Publication Date: 2016-08-18
    Description: Coral-associated invertebrates dominate the biodiversity of coral reefs. Some of the associations involving symbiotic invertebrates remain unknown or little studied. This holds true even for relatively wellstudied coral reefs, like those in the Caribbean Sea. Coral gall crabs (Cryptochiridae), obligate symbionts of stony corals, form a much-overlooked component of coral reef communities. Most recent studies on the Atlantic members of Cryptochiridae have been conducted off Brazil and little recent data have become available from the Caribbean region. During fieldwork off Curaçao (southern Caribbean Sea), eight new host coral species, belonging to four coral families, were recorded for three cryptochirid species. Kroppcarcinus siderastreicola Badaro, Neves, Castro and Johnsson, 2012, previously only known from Brazil, and Opecarcinus hypostegus (Shaw and Hopkins, 1977) are new additions to the fauna of Curaçao. Besides the new hosts and geographic range extensions, a free-living male Troglocarcinus corallicola Verrill, 1908 was observed visiting a female of the same species lodged in her gall in an Orbicella annularis (Ellis and Solander, 1786) colony. This is the first photodocumented record of the “visiting” mating system in Cryptochiridae.
    Keywords: shallow-water gall crabs ; Decapoda ; Cryptochiridae ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 16
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    In:  Contributions to Zoology (13834517) vol.75, 1/2 (2006) p.1
    Publication Date: 2014-11-07
    Description: We have examined the caudal regions of diverse peracarid and pancarid malacostracans using light and scanning electronic microscopy. The traditional view of malacostracan posterior anatomy is not sustainable, viz., that the free telson, when present, bears the anus near the base. The anus either can occupy a terminal, sub-terminal, or mid-ventral position on the telson; or can be located on the sixth pleomere – even when a free telson is present. Furthermore, there is information that might be interpreted to suggest that in some cases a telson can be absent. Embryologic data indicates that the condition of the body terminus in amphipods cannot be easily characterized, though there does appear to be at least a transient seventh segment that seems to fuse with the sixth segment. Our understanding of the genesis of the so-called telson of amphipods could be subject to alternative interpretations than those traditionally put forth.
    Keywords: anus ; Pancarida ; Peracarida ; pleomeres ; proctodaeum ; teloblasts ; telson ; urosome ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 17
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    In:  Contributions to Zoology (13834517) vol.75, 3/4 (2006) p.189
    Publication Date: 2014-11-07
    Description: Small populations of several species of the groundwater dwelling amphipod genus Ingolfiella are found in caves, wells, seabottoms, beaches and riverbed interstitial habitats. To gain insight in the socio-ecology of these elusive species, we used data from collected specimens to explore the relationships between sexratios, display of secondary sexual characters and other morphological features, and habitat use. We extracted data on the sex ratios and the presence-absence of secondary sexual characters of 13 species from the literature and through examination of museum material. We found a clearly skewed sex ratio with a preponderance of females, both in the individual species as in the genus as a whole. However, sex ratio and the display of secondary sexual characters were not correlated, nor did these characters correlate with the amount of sexual dimorphism. It remains unknown why so many ingolfiellids have evolved these costly features.
    Keywords: arthropod sex ratio ; socio-ecology ; groundwater amphipods ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 18
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    In:  Contributions to Zoology (13834517) vol.75, 3/4 (2006) p.169
    Publication Date: 2014-11-07
    Description: The amphipod family Stenothoidae contains more than 200 species in about 40 genera; these genera are at present often defined not by the presence, but by the absence of synapomorphies, thus defining grades rather than clades. Our phylogenetic analyses yielded 4 groups of stenothoids: a basic proboloidid clade; an advanced and always clearly separated Austral-Antarctic thaumatelsonid clade, with a possibly related Arctic mesometopid clade; and finally a poorly resolved group, the stenothoids sensu stricto, including the large and probably polyphyletic genera Stenothoe and Metopa, each with more than 50 species. It is proposed to study and analyse these groups separately in future, based on better redescriptions of the individual species. Our analyses support the family status of the Thaumatelsonidae, erected as a family by Gurjanova in 1938, but reduced to subfamily rank by Barnard in 1972.
    Keywords: Taxonomy ; Amphipoda ; Stenothoidae ; Thaumatelsonidae ; phylogenetic analysis ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 19
    Publication Date: 2014-11-07
    Description: Two new brachyuran species are described for the Upper Cretaceous Mexcala Formation, Guerrero State, Mexico. Longusorbis quadratus new species (Coniacian, Temalac region) is the oldest and southernmost record for the genus. Xanthosia zoquiapensis new species (Campanian, Zoquiapa region) is the first record for the genus in Mexico. In addition, the age for Costacopluma bishopi Vega and Feldmann is discussed (Coniacian, Temalac region) and represents the oldest and southernmost record for Cretaceous representatives of this genus in North America. All specimens are considerably smaller compared to other species of the same genera and are interpreted as the first example of brachyuran dwarfism in the geological record. These species add new insight into possible migratory routes during the Late Cretaceous. Within Longusorbis, a northwestern migratory route is documented from the Coniacian in Mexico to the Campanian - Maastrichtian of the west coast of North America (Canada), whereas within the genus Xanthosia, a western migratory route from the Albian of Europe to the Campanian of Mexico is indicated. Costacopluma migrated east and north to the west coast of Africa, southeast North America and Greenland.
    Keywords: Dwarfism ; decapoda ; Cretaceous ; new species ; Mexico ; 38.22 ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 20
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    In:  Zoologische Mededelingen (0024-0672) vol.80 (2006) nr.4 p.33
    Publication Date: 2010-12-12
    Description: A new species of sponge-associated pontoniine shrimp from Zanzibar is described and illustrated and its systematic position is discussed.
    Keywords: Crustacea ; Decapoda ; Pontoniinae ; Periclimenaeus fawatu spec. nov. ; sponge associate ; Zanzibar ; Indian Ocean ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 21
    Publication Date: 2014-11-07
    Description: A phylogenetic analysis was conducted including representatives from all recognized extant and extinct families of the Xanthoidea sensu lato, resulting in one new family, Hypothalassiidae. Four xanthoid families are elevated to superfamily status, resulting in Carpilioidea, Pilumnoidoidea, Eriphioidea, Progeryonoidea, and Goneplacoidea, and numerous subfamilies are elevated to family status. The Mathildellidae is moved from the Goneplacidae to the Portunoidea. Diagnoses for all superfamilies and families discussed herein are provided, embracing characters typically used by biologists as well as readily fossilized features of the dorsal carapace, sternum, abdomen, and chelipeds. All genera known from the fossil record at one time referred to the Xanthidae sensu lato, Xanthoidea sensu lato, or Goneplacidae sensu lato were evaluated as to their family level placement and as a result, the family-level placement of many of these genera has been changed herein. Balcacarcinus new substitute name, is provided herein for Bittneria Schweitzer and Karasawa, 2004.
    Keywords: Crustacea ; Decapoda ; Brachyura ; Xanthoidea ; Portunidae ; systematics ; phylogeny ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 22
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    In:  Zoologische Mededelingen (00240672) vol.80 (2006) nr.4 p.9
    Publication Date: 2010-12-12
    Description: The debate on a proper subdivision of the large genus Uca was initiated by the conflicting proposals of Bott (1973) and Crane (1975). In spite of recent computer-aided mending attempts, the overall situation (instability of Uca systematics and nomenclature) has not convincingly improved. Here we try to settle the debate by presenting a simple cladistic analysis sensu Hennig (1950) based on selected morphological characters supplemented by functional remarks and a few behavioural data resulting from fieldwork. All 94 species (except six) were examined, mostly by using the authors’ collection of Uca (partly in Marburg and partly deposited in the Leiden Museum) and all species (see list in chapter 5) are assigned to one of the eight subgenera recognized: Australuca, Cranuca subgen. nov., Gelasimus, Leptuca, Minuca, Paraleptuca, Tubuca, Uca s. str. Some emphasis is laid on a differentiation within the synapomorphies selected: five “major unique inventions” (table 1) are delimited from normal apomorphic character states. The discussion is confined to zoogeographical conclusions, which refer to an early dispersal within “Wegener’s Indo-Atlantic Ocean” and which favour Australia as the centre of origin of the genus Uca.
    Keywords: fiddler crabs ; subgenera ; cladistic analysis ; morphology ; “major unique inventions” ; zoogeography ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 23
    Publication Date: 2010-12-12
    Description: A new species of crayfish, Cherax (Cherax) holthuisi spec. nov., is described and illustrated on the basis of nine specimens collected from Aitinjo Lake, Irian Jaya, Indonesia.
    Keywords: Crustacea ; Decapoda, Parastacidae ; Cherax (Cherax) holthuisi ; new species ; freshwater crayfish, Irian Jaya ; Indonesia ; West New Guinea ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 24
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    In:  Zoologische Mededelingen (0024-0672) vol.80 (2006) nr.4 p.71
    Publication Date: 2010-12-12
    Description: A new genus, Soceulia, is established for Leucosia species with third to fifth segments of the male abdomen fused, the first male pleopod with shaft coiled once on its axis, and terminating in a digitate apical process encased in a setose muff: L. marmorea Bell, 1855, L. brunnea Miers, 1877, L. major Chen & Ng, 2003, and a new species, S. alainia. The species are described or redescribed and illustrated, extended synonymies are given, and a key for their identification is provided.
    Keywords: Decapoda ; Leucosiidae ; Leucosia ; Soceulia ; new genus ; new species ; Indo-Pacific ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 25
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    In:  Zoologische Mededelingen (0024-0672) vol.80 (2006) nr.4 p.55
    Publication Date: 2010-12-12
    Description: A new genus, Coleusia, is established for Leucosia species with segments 3-5 of the male abdomen fused, the shaft of the male’s first pleopod coiled thrice on its axis, bearing distally a setose lobe and an elongate apical process: L. biannulata Tyndale-Biscoe & George, 1962, L. magna Tyndale-Biscoe & George, 1962, L. signata Paulson, 1875, and L. urania (Herbst, 1801), and a new species: C. rangita. The species are described or redescribed and illustrated, extended synonymies are given, and a key for their identification is provided.
    Keywords: Decapoda ; Leucosiidae ; Leucosia ; Coleusia ; new genus ; new species ; Indo-Pacific ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 26
    Publication Date: 2010-12-12
    Description: During the DIVA-2 cruise (May 31 - July 4, 1994, see Desbruyères et al., 1994) and the PICO cruise (June 25 – July 11, 1998, N/O Nadir, PI: D. Desbruyères) to the Azores Triple Junction Area, two rare species of caridean shrimp were collected. Seven specimens of the pandalid Plesionika alexandri (A. Milne Edwards, 1883) were collected at the Lucky Strike hydrothermal vent field (37°20’N), and one specimen of the pontoniine Periclimenes kornii (Lo Bianco, 1903), at the Menez Gwen hydrothermal vent field (37°50’N). These hydrothermal vent fields are located on the Mid-Atlantic Ridge SW of the Azores. Both species of shrimp are only known from a few specimens. The original description of Plesionika alexandri was based on an incomplete specimen. It is now re-described on the bases of the present material
    Keywords: Crustacea ; Decapoda ; Caridea ; Plesionika alexandri, re-description, Periclimenes kornii ; Mid-Atlantic Ridge ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 27
    Publication Date: 2007-01-16
    Description: Two new species of sesarmid crabs are described from the mangroves of Timika in Papua (= Irian Jaya), Indonesia. Haberma kamora spec. nov. is the second species in the genus described from Singapore, differing from the type species in the form of its male first pleopods and possessing relatively more slender ambulatory legs. Parasesarma charis spec. nov. resembles P. erythrodactyla, P. tripectinis and to some extent, P. lepidum, but has different ambulatory leg proportions and a distinctive male first pleopod structure. Parasesarma acis Davie, 1993, is regarded as a junior synonym of P. tripectinis Shen, 1940.
    Keywords: Crustacea ; Decapoda ; Brachyura ; Sesarmidae ; taxonomy ; Haberma ; Parasesarma ; new species ; Indonesia ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 28
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    In:  Zoologische Mededelingen (00240672) vol.79-2 (2005) p.9
    Publication Date: 2007-01-16
    Description: A new genus, Urnalana, is established for Leucosia species with an urn-shaped carapace: L. angulata Rathbun, 1911, L. chevretii Haswell, 1880, L. cumingii Bell, 1855, L. elata A. Milne Edwards, 1874, L. elatoides Bouvier, 1915, L. hilaris Nobili, 1905, L. haematostica Adams & White, 1849, L. insularis Takeda & Kurata, 1976, L. margaritata A. Milne Edwards, 1874, L. pulchella Bell, 1855, L. purarensis Ovaere, 1987, L. thysanotus George & Clark, 1976, L. whitei Bell, 1855, and three new species: U. elatula, U. granulimera, and U. parahaematostica. The species are described or redescribed and illustrated, extended synonymies are given, and a key for their identification is provided.
    Keywords: Decapoda ; Leucosiidae ; Leucosia ; new genus ; new species ; Indo-Pacific ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 29
    Publication Date: 2014-11-07
    Description: A small collection of copepod samples from several wells in the Canterbury region, South Island, was examined. It contained a few cosmopolitan cyclopoid species, three interesting harpacticoids, as well as two new cyclopoid genera. The latter are presented in this paper, together with a redescription and first description of the male of Goniocyclops silvestris Harding, 1958, a cyclopoid species previously known only from North Island. Both new genera are from the Diacyclops-Acanthocyclops complex. Abdiacyclops gen. nov. is easily distinguishable from the complex by its unique swimming legs segmentation formula (2/2, 3/3, 3/3, 3/3), and is so far monospecific and known only after females. The most important characters of the second new genus, Zealandcyclops gen. nov. are: the swimming legs segmentation formula of 2/2, 3/2, 3/2, 3/2; a very small and two-segmented fifth leg; 11-segmented antennula; and sexual dimorphism in the swimming legs, with a transformed apical spine on the third leg endopod in the male. Four species were included in this genus: Zealandcyclops fenwicki sp. nov., from a well in the South Canterbury region; Z. haywardi sp. nov., from a well in the North Canterbury region; Z. eulitoralis (Alekseev and Arov, 1986) comb. nov., from the interstitial of several beaches on the southern shore of Lake Baikal; and Z. biceri (Boxshall et al., 1993) comb. nov., from a sandy beach on the western shore of Lake Baikal. Zealandcyclops gen. nov. seems to be an archaic cyclopoid genus, having survived only in New Zealand and in the ancient Lake Baikal. With the present report, the New Zealand cyclopoid fauna numbers 16 species, a systematic list of which is presented in this paper. The majority of them are cosmopolitan elements, probably introduced here by early European settlers. Only one genus (8%) and six species (38%) are endemic, which is probably a reflection of the absence of any comprehensive research on the New Zealand cyclopoids.
    Keywords: Stygofauna ; Cyclopoida ; New Zealand ; taxonomy ; Abdiacyclops ; Zealandcyclops ; Goniocyclops ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 30
    Publication Date: 2014-11-07
    Description: Strandesia kimberleyi n. sp. is described from subterranean waters of the Kimberley Region (Western Australia). It belongs to the group of relatively elongated Strandesia Stuhlmann, 1888 species, with no projection on the carapace and with a finely serrated posterior margin of the CR and its claws. The new species is characterized by the asymmetrical valves, elongated terminal segment of the maxillular palp, and the presence of a sensory organ antero-proximally on the first segment of the antennula. This is the first time that this organ is reported in the genus Strandesia. Strandesia purpurascens (Brady, 1886) is redescribed, while for S. variegata (Sars, 1901) and S. obliqua (Brady, 1868) some additional notes on the morphology are provided. A key to identification of 67 species of Strandesia is here given. This number includes a new species and two new combinations (S. iheringi (Sars, 1901) comb. nov., and S. mollis (Furtos, 1936) comb. nov.). Strandesia ewaldi is proposed as a nomen novum for S. labiata Roessler, 1990, while 31 species are proposed to be synonyms.
    Keywords: taxonomy ; Ostracoda ; Cyprididae ; Strandesia ; key ; 42.74
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  • 31
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    Unknown
    In:  Contributions to Zoology (13834517) vol.74, 3/4 (2005) p.313
    Publication Date: 2014-11-07
    Keywords: Arthropods ; Crustacea ; review ; festschrift ; Fredrick R. Schramm ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
    Type: Book review
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  • 32
    Publication Date: 2014-11-07
    Description: A new species of amphipod, Bathyporeia watkini sp. nov. from the Atlantic coasts of North Africa is described. This very characteristic species is abundant in some lagoons and estuaries near 28°N. New morphological information on B. elkaimi d’Udekem d’Acoz and Menioui, 2004 is given after specimens that were recently collected on the Atlantic coasts of southern Spain and South Portugal. The male of B. ledoyeri d’Udekem d’Acoz and Menioui, 2004 is described for the first time and new records of North African B. guilliamsoniana (Bate, 1857) and B. chevreuxi d'Udekem d'Acoz and Vader, 2005a are discussed.
    Keywords: Bathyporeia ; Crustacea ; Amphipoda ; taxonomy ; North Africa ; Spain ; Portugal ; eastern Atlantic ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 33
    facet.materialart.
    Unknown
    In:  Scripta Geologica (03757587) vol.130 (2005) p.187
    Publication Date: 2007-01-15
    Description: For fossil verrucid barnacles, the name Verruca withersi appears to have been used twice; Schram & Newman described material from the Albian-Cenomanian (Cretaceous) of Colombia, while Kruizinga had previously recorded a new species from the Pleistocene(?) or perhaps younger strata of Sumba (Indonesia). We do not consider V. withersi Schram & Newman to be a cirripede, therefore no replacement name is needed for this junior synonym. Verruca withersi Kruizinga is a valid species related to the extant V. cookei.
    Keywords: Crustacea ; Cirripedia ; Thoracica ; Verrucidae ; homonymys ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 34
    Publication Date: 2007-01-16
    Description: The main aim of the present paper is to delimit ‘true’ Spermophora, i.e. the group of species most closely related to the type species S. senoculata (Dugès). Apart from the type species, only three previously described species are included in this core group (S. estebani Simon, S. paluma Huber, S. yao Huber), together with nine newly described species: S. kerinci, S. tumbang, S. dumoga, S. maros, S. deelemanae, S. palau, S. kaindi, S. luzonica, and S. sumbawa. Except for the Holarctic and anthropophilic type species, all species have limited distributions in Southeast Asia, northeastern Australia, and the Pacific Islands, where they inhabit the leaf litter layer of tropical forests as well as caves. A tight correlation is documented in Spermophora between the male cheliceral apophyses (distance between the tips) and the pockets on the female external genitalia. In addition, three new Southeast Asian genera are described that appear similar to Spermophora but do not share the synapomorphies of the genus: Aetana n. gen. with three new species from the Philippines (A. omayan), Borneo (A. kinabalu), and Fiji (A. fiji); Savarna n. gen., with one new species from southern Thailand (S. thaleban) and two species from Sumatra and Malaysia transferred from Spermophora [Savarna tessellata (Simon) n. comb., and S. baso (Roewer) n. comb.]; and Khorata n. gen., with four new species from Thailand (K. bangkok, K. schwendingeri) and Laos (K. khammouan, K. jaegeri).
    Keywords: Araneae ; Pholcidae ; Spermophora ; revision ; taxonomy ; Southeast Asia ; Pacific ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 35
    facet.materialart.
    Unknown
    In:  Zoologische Mededelingen (00240672) vol.79-2 (2005) p.41
    Publication Date: 2007-01-16
    Description: A new genus, Seulocia, is established for Leucosia species with segments 3-6 of the male abdomen fused, and the first male pleopod with straight shaft, twisted once on its axis: L. laevimana Miers, 1884, L. latirostrata Shen & Chen, 1978, L. pubescens Miers, 1877, L. pulchra Shen & Chen, 1978, L. rhomboidalis de Haan, 1841, L. truncata Alcock, 1896, and L. vittata Stimpson, 1858, and three new species: S. anahita, S. crepuscula, S. cristata. The species are described or redescribed and illustrated, extended synonymies are given, and a key for their identification is provided. The choice of the lectotype of L. rhomboidalis is discussed.
    Keywords: Decapoda ; Leucosiidae ; Leucosia ; Seulocia ; new genus ; new species ; Indo-Pacific ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 36
    Publication Date: 2014-11-07
    Description: We investigated mtDNA genetic differentiation and the phylogenetic relationships of 11 populations of the oniscidean genus Ligidium. We studied nine populations from Greece, assigned to three nominal species (L. euboicum, L. germanicum and L. beieri), and two from central Europe (L. germanicum and L. hypnorum), applying RFLP analysis of two mtDNA segments (12S rDNA and 16S rDNA) amplified by PCR. The analysis revealed seven monomorphic and four polymorphic populations, and 17 different haplotypes, each one present in one population only. Several restriction enzymes produced population specific patterns, enabling discrimination among the different populations. The estimated net nucleotide divergence between populations ranges from 1.06 to 16.52%, while the high NST value (0.96) indicates the existence of increased interpopulation genetic differentiation that can be attributed to the extreme isolation among Ligidium populations. The relationships between haplotypes and populations are not congruent with their geographical distribution and the established taxonomy within the genus.
    Keywords: Oniscidea ; Greece ; mtDNA ; RLFPs ; genetic isolation ; Ligidium ; isopods ; 16S rDNA ; 12S rDNA ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 37
    Publication Date: 2007-01-18
    Description: In recent sampling along the Colombian Caribbean coast, three species of the genus Plesionika (P. gigliolii, P. longicauda, and P. willesi) have been added to the seven reported upon by Campos et al. (in press). P. gigliolii is now recorded for the first time from the West Atlantic. The taxonomic status of P. acanthonotus is discussed. A key to the Atlantic species of Plesionika is provided.
    Keywords: Caridea ; Pandalidae ; Plesionika ; range extensions ; West Atlantic ; Colombia ; key ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 38
    Publication Date: 2007-01-18
    Description: New localities and records of pseudoscorpions are given for the Leeward Islands, the Windward Islands and Curaçao. The protonymph of Serianus gratus Hoff, 1964, from Curaçao is described.
    Keywords: Pseudoscorpiones ; Aphelolpium scitulum ; Aphelolpium brachytarsus ; Pachyolpium arubense arubense ; Serianus gratus ; Leeward Islands ; Windward Islands ; Curaçao ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 39
    facet.materialart.
    Unknown
    In:  Zoologische Mededelingen (00240672) vol.78, 1-16 (2004) p.275
    Publication Date: 2007-01-18
    Description: Cordylochernes scorpioides (Linnaeus, 1758) (Pseudoscorpiones: Chernetidae) is redescribed and illustrated.
    Keywords: Chernetidae ; Cordylochernes scorpioides ; Brazil ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 40
    Publication Date: 2007-01-09
    Description: Eoferreola rhombica, a pompilid new to the Dutch fauna, and its remarkable host, Eresus sandaliatus (Hymenoptera: Pompilidae; Araneae: Eresidae) In 1998 a female specimen of Eoferreola rhombica (Christ, 1791) was collected in a road-verge on the Veluwe. The nearest populations of this species are found in northern France and eastern Germany. It is possible that this insect was transported by traffic from one of these populations. However at the collection site a large population of the rare host spider Eresus sandaliatus (Martini & Goeze, 1778) is known to be present for many years. Therefore the presence of a population of E. rhombica cannot be excluded. Future observations have to reveal the status of this spider wasp in the Netherlands.
    Keywords: Hymenoptera ; Pompilidae ; Eoferreola rhombica ; Araneae ; Eresidae ; Eresus sandaliatus ; Biologie ; Verspreiding ; Herkenning ; Nederland ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 41
    facet.materialart.
    Unknown
    In:  Nederlandse Faunistische Mededelingen (01692453) vol.9 (1999) p.7
    Publication Date: 2007-01-09
    Description: The amphipod Echinogammarus stoerensis not extinct in The Netherlands (Crustacea: Amphipoda: Gammaridea) The gammaridean amphipod Echinogammarus stoerensis has never been a common species in the Netherlands, due to the scarcity of suitable habitats. It is typically found under boulders on a gravelly substrate, where a freshwater flow occurs over the littoral zone. As a result of reinforcement of sea dykes, the typical habitat disappeared from The Netherlands. However, E. stoerensis proves to survive in less suited substrates with more silt, and freshwater supply only from rain.
    Keywords: Crustacea ; Amphipoda ; Gammaridea ; Verspreiding ; Herkenning ; Nederland ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 42
    facet.materialart.
    Unknown
    In:  Nederlandse Faunistische Mededelingen (01692453) vol.9 (1999) p.103
    Publication Date: 2007-01-10
    Description: The millipede Archiboreoiulus pallidus, new to the Dutch fauna (Myriapoda: Diplopoda) Some specimens of the millipede Archiboreoiulus pallidus (Brade-Birks, 1920) were found in April 1996 in ‘het Bovenste Bos’, a deciduous forest south of Epen, in the province of Limburg. Two weeks later, a visit was paid to the collection of the Plant Protection Service and this resulted in a second record of this species. This specimen was found in June 1977 in an agricultural field near Maastricht, about 15 km west of Epen (province of Limburg). This is the first record of A. pallidus for the Dutch fauna. This species is morphologically very similar to Blaniulus guttulatus. The most important characteristics in which A. pallidus differs from B. guttulatus are described and illustrated. A short introduction to the ecology of A. pallidus is given and the distribution in Europe is shown. With this new species, 47 millipedes are now known to occur in the Netherlands.
    Keywords: Arthropoda ; Myriapoda ; Diplopoda ; Archiboreoiulus pallidus ; Nederland ; Verspreiding ; Biotopen ; Herkenning ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 43
    facet.materialart.
    Unknown
    In:  Nederlandse Faunistische Mededelingen (01692453) vol.8 (1999) p.67
    Publication Date: 2007-01-09
    Description: Checklist of the Dutch centipedes (Myriapoda: Chilopoda) An updated checklist for the centipedes of the Netherlands is presented. One species, Lithobius subtilis, is new compared with the previous checklist. The updated list will be used for the project ‘The centipedes of the Netherlands’ of the European Invertebrate Survey - Nederland.
    Keywords: Arthropoda ; Myriapoda ; Chilopoda ; Naamlijst ; Nederland ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 44
    facet.materialart.
    Unknown
    In:  Nederlandse Faunistische Mededelingen (01692453) vol.9 (1999) p.11
    Publication Date: 2007-01-09
    Description: Arrenurus boruzkii, een nieuwe watermijt voor Nederland, met opmerkingen over de morfologie (Acari: Hydrachnidia) In 1998 werd de watermijt Arrenurus boruzkii Ssujetow, 1931 voor het eerst in Nederland aangetroffen. Een vrouwtje werd verzameld in een sloot in Overijssel. De morfologische verschillen met Zweedse exemplaren en beschrijvingen in de literatuur worden besproken.
    Keywords: Acari ; Hydrachnidia ; Nederland ; Verspreiding ; Herkenning ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 45
    Publication Date: 2007-01-10
    Description: The influence of recent inundations on the distribution pattern of the isopod Eluma purpurascens in the province of Zeeland (Crustacea: Isopoda: Oniscoidea) Small scale mapping of Eluma purpurascens Budde-Lund, 1885 in the province of Zeeland revealed a remarkable distribution pattern. The species proved to be absent in parts which have been inundated during and after the second world war. This study shows that for the interpretation of distribution patterns the history of the study area should be considered.
    Keywords: Arthropoda ; Crustacea ; Isopoda ; Oniscoidea ; Nederland ; Verspreiding ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 46
    facet.materialart.
    Unknown
    In:  Zoologische Mededelingen (00240672) vol.73, 1-11 (1999) p.63
    Publication Date: 2007-01-23
    Description: During the Rumphius Biohistorical Expedition (RBE) to Ambon, 33 species of swimming crabs were collected in the littoral and upper sublittoral zone by hand on tidal flats, using SCUBA, and using a Holthuis dredge. Lissocarcinus arkati, L. laevis, Charybdis (C.) hellerii, C. (C.) orientalis, C. (C.) variegata, Portunus hastatoides, P. iranjae, P. longispinosus, P. stephensoni, T. chaptalii, T. cooperi, T. stephensoni are recorded at Ambon and in the Moluccas for the first time. The Portunus tenuipes complex is partly revised and P. rugosus sensu Stephenson (1961) is considered a synonym of P. tenuipes De Haan, 1835. A new species, P. pseudotenuipes occurring at Ambon, in the Philippines and off South-East Asia is described. The Ambon fauna includes 55 swimming crab species, while for the Moluccas fauna 70 species are known. This makes Ambon probably one of the best studied local portunid faunas in the Indo-Pacific. According to the RBE collection and literature data, several groups of species with certain habitat preferences are discussed. 1) Upper sublittoral dwellers. 2) Shore dwellers occur in the intertidal zone, mostly on tidal flats, and in the upper sublittoral. 3) Primarily rock, rubble and reefflat dwellers belonged mainly to the genus Thalamita. 4) Symbiotic species of Caphyra are associated with alcyonarians while Lissocarcinus are commensals of anthozoans and echinoderms. A new association was recorded for the first time for Lissocarcinus arkati (with sea urchins), and the association of L. laevis with ceriantharians was confirmed.
    Keywords: Crustacea ; Decapoda ; Brachyura ; Portunidae ; Indonesia ; Ambon ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 47
    facet.materialart.
    Unknown
    In:  Zoologische Mededelingen (00240672) vol.73, 1-11 (1999) p.27
    Publication Date: 2007-01-23
    Description: Twenty-four species of trapeziid crabs, symbionts of scleractinian corals and other colonial cnidarians, are listed from Ambon and other locations throughout Indonesia. Sixteen of these species were collected by the Rumphius Biohistorical Expedition to Ambon (1990). Eight species (Quadrella reticulata Alcock, 1898, Tetraloides heterodactyla (Heller, 1861), Trapezia flavopunctata Eydoux & Souleyet, 1842, T. formosa Smith, 1869, T. garthi Galil, 1983, T. lutea Castro, 1997, T. punctipes Castro, 1997 and T. serenei Odinetz, 1984) are new records for Indonesia. The taxonomic status of Quadrella boopsis, Q. reticulata, Tetralia rubridactyla Garth, 1971 and Trapezia garthi Galil, 1983 are also revised. A key for the identification of the Indonesian species of Quadrella, Tetralia and Trapezia is given.
    Keywords: Crustacea ; Brachyura ; Trapeziidae ; symbiosis ; new records ; Ambon ; Indonesia ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 48
    facet.materialart.
    Unknown
    In:  Nederlandse Faunistische Mededelingen (01692453) vol.8 (1999) p.77
    Publication Date: 2007-01-09
    Description: Cylisticus convexus, a rare synanthropic woodlouse in The Netherlands (Crustacea: Isopoda: Cylisticidae) Until recently, the occurrence of Cylisticus convexus (De Geer, 1778) in the Netherlands was uncertain. The only certain old record dates from March 1927, when the species was collected at the coal-shed of the Zoological Museum at Amsterdam. During the last years, two specimens have been collected on semi-natural sites. Both were found on a dike, one near Everdingen, in the province of Gelderland, and one near Ritthem, in the province of Zeeland. These are the first records of C. convexus in the field. Yet the species certainly is very rare in The Netherlands. The most important morphological characteristics of the species are described and illustrated. Some information on the ecology and distribution in Europe is provided.
    Keywords: Crustacea ; Isopoda ; Oniscoidea ; Cylisticus convexus ; Verspreiding ; Herkenning ; Biotopen ; Nederland ; 42.74
    Repository Name: National Museum of Natural History, Netherlands
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  • 49
    Publication Date: 2007-01-23
    Description: A new species of scyllarid lobster, Ibacus chacei, from eastern Australia is described and illustrated. The new species can be distinguished from all other known Ibacus species by the shape of the third maxilliped. Ibacus brevipes Bate, 1888 is recorded from Australia for the first time. Seven out of the eight known species of Ibacus are now recorded from Australia. Colour descriptions, and updated distributions for all Australian Ibacus species are included, plus further comments on the type locality of Ibacus peronii Leach, 1815. Colour illustrations and a key to the eight known species of Ibacus are also provided.
    Keywords: Decapoda ; Scyllaridae ; Ibacus ; new species ; Australia ; 42.74
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  • 50
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Cellular Physiology 177 (1998), S. 377-386 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Apoptosis in cells of different lineages is restrained by survival signals which depend upon cell-to-cell communication. The aim of this study was to determine whether colonic cells deprived of crypt ambient are doomed to die prior to their normal chronological demise. Apoptosis was studied in rat whole colonic tissue, in isolated intact crypts, and in colonic cell populations collected from the crypt axis at different stages of proliferation and differentiation. In a number of experiments, cell harvest was performed in the presence of either a tetrapeptide (YVAD-CMK) inhibitor of interleukin-1β-converting enzyme (ICE), or tyrphostin A25, a protein tyrosine kinase inhibitor, or sodium-orthovanadate, a phosphatase inhibitor. DNA fragmentation was assessed by electrophoretic and nonisotopic-labeling procedures. The ultrastructure of colonic tissue specimens and isolated cells was examined by transmission electron microscopy. Apoptosis in whole colonic tissue and in isolated crypts was confined predominantly to cells resident in the upper crypt regions. In contrast, extensive apoptotic death was observed in isolated colonic cells, irrespective of their developmental stage and positional hierarchy within the crypt continuum at harvest time. An apoptotic gradient, however, was evident. Exposure to YVAD-CMK resulted in a marked decrease in the number of apoptotic cells. Treatment with tyrphostin A25 caused a sharp rise in the apoptotic index; conversely, vanadate significantly impeded apoptosis. Cumulatively, these results indicate that disordered intercellular communication provokes unscheduled ICE-mediated apoptosis of colonocytes, and that local signals along the crypt continuum control both the reprieve from death and the timely demise of distinct colonic cell populations. Attenuation of tyrosine phosphorylation may be a contributory event in the acquisition of the apoptotic phenotype. J. Cell. Physiol. 177:377-386, 1998. © 1998 Wiley-Liss, Inc.
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  • 51
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Cellular Physiology 177 (1998), S. 518-524 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: No abstract.
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  • 52
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Cellular Physiology 177 (1998), S. 525-534 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: No abstract.
    Additional Material: 1 Ill.
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  • 53
    Electronic Resource
    Electronic Resource
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Cellular Physiology 177 (1998), S. 575-584 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The role of hsp27 as an inhibitor of actin polymerization was considered in the context of the actin cytoskeleton and its relationship with focal adhesion formation. The aim of this study was to evaluate the potential effects of hsp27 on focal adhesion formation as a relevant biological consequence of actin stress fiber formation. When hsp27 was overexpressed in stably transfected cells, cell attachment was delayed and recovery of disrupted stress fibers and focal adhesions was limited. In ROS 17/2.8 cells, heat shock caused the reversible disruption of stress fibers and focal adhesions. The loss of stress fibers and focal adhesions was associated with reduced phosphotyrosine on the focal adhesion kinase (FAK). Microinjection of recombinant 6-His hsp27 and phosphorylated 6-His hsp27 was used to demonstrate that nonphosphorylated hsp27 prevented the recovery of stress fibers and focal adhesions. These results provide in vivo evidence that hsp27 acts as an inhibitor of actin polymerization that can alter cellular interactions with extracellular environments by perturbation of stress fibers, and subsequently focal adhesions. J Cell Physiol 177:575-584, 1998. © 1998 Wiley-Liss, Inc.
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  • 54
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Hepatocytes entrapped in collagen gel and cultured in serum-free conditions survived longer than cells cultured on plastic (5 days vs. 3 weeks), showed fewer signs of early cell senescence (no increase in c-fos oncoprotein expression), and maintained the expression of differentiated hepatic metabolic functions over a longer period of time. Cells cultured in collagen gels retained their ability to respond to hormones. The insulin-stimulated glycogen synthesis rate remained fairly constant during 18 days in culture (between 5.4 ± 0.37 and 9 ± 2.7 nmol glucose/h/μg DNA). Collagen-cultured hepatocytes recovered glycogen stores to levels similar to those found in liver, or in hepatocytes isolated from fed rats. Urea synthesis from ammonia remained stable for more than 2 weeks (average value, 23 ± 4 nmol urea/h/μg DNA). The rate of albumin synthesis in collagen-entrapped cells was maintained above the day-1 level during 18 days in culture. Cells showed high levels of glutathione (GSH) (1,278 ± 152 pmol/μg DNA). Biotransformation activities CYP4501A1, CYP4502A2, CYP4502B1, and CYP4503A1 remained fairly stable in collagen-cultured hepatocytes. CYP4502E1 and CYP4502C11 decreased but were still measurable after 18 days. After 4 days in culture, GST activity returned to levels observed in isolated hepatocytes. In contrast with plastic cultures, cells responded to CYP450 inducers (methylcholanthrene for CYP4501A1, CYP4501A2, and gluthatione-transferase, and ethanol for CYP4502E1) for more than 2 weeks. CYP4501A1, CYP4501A2, and glutathione-transferase A2 (GST A2) induction was preceded by an increase in specific mRNA, while the effects on CYP4502E1 seemed to be at a posttranslational level. Analysis of the expression of relevant hepatic genes by reverse Northern and semiquantitative reverse transcriptase-polymerase chain reaction (RT-PCR) revealed that culturing hepatocytes in collagen gels results in a sustained higher expression of key liver transcription factor genes DBP, C/EBP-α and -β, and HNF-1 and -4, as well as specific liver enzyme genes (phosphoenol pyryvate carboxykinase, and carbamoylphosphate-synthetase I). J Cell Physiol 177:553-562, 1998. © 1998 Wiley-Liss, Inc.
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  • 55
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    Journal of Cellular Physiology 177 (1998), S. 535-552 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The viral Crk oncogene (v-Crk) is known to induce sarcomas in chicken and its cellular homologs c-Crk I, c-Crk II, and Crk-like (CRKL) have been implicated in many signal transduction events. These include cell differentiation, cell migration, and the induced nonresponsiveness of T-cells to stimulation of the T-cell receptor (TCR), a state known as anergy. CRKL is also the most prominent substrate of the Bcr-Abl oncoprotein which causes human chronic myelogenous leukemias (CML). The modular composition of the Crk family adapters which largely consist of Src homology (SH2 and SH3) domains has prompted an intensive search for physiological and pathological upstream and downstream signalling partners which selectively bind to these adapters. Upstream proteins include various receptors and large multisite docking proteins, while several protein kinases and guanine nucleotide release proteins (GNRPs) have been suggested to function downstream of c-Crk and CRKL. Most Crk/CRKL SH2- and SH3-binding proteins contain several docking sites with considerable sequence similarity. Thus the binding requirements of Crk/CRKL SH2 and SH3 domains are now well defined, providing a basis for the design of small inhibitory molecules to block the function of these adapter proteins. The enzymatic cascades activated through Crk family adapters are only partially known, but stress kinases (SAPKs/JNKs) and the GTPase Rap1, as well as the B-Raf isoform of the Raf protein kinases, are affected in some systems. Several yet unidentified, highly selective Crk interacting proteins detectable in specific cell types remain to be studied. More detailed analyses of the enzymatic activities triggered through Crk-type adapters will also be crucial to fully define the signalling pathways controlled by this protein family. J Cell Physiol 177:535-552, 1998. © 1998 Wiley-Liss, Inc.
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  • 56
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: We have previously described a specific, saturable receptor for rat collagenase-3 in the rat osteosarcoma cell line, UMR 106-01. Binding of rat collagenase-3 to this receptor is coupled to the internalization and eventual degradation of the enzyme and correlates with observed extracellular levels of the enzyme. In this study we have shown that decreased binding, internalization, and degradation of 125I-rat collagenase-3 were observed in cells after 24 h of parathyroid hormone treatment; these activities returned to control values after 48 h and were increased substantially (twice control levels) after 96 h of treatment with the hormone. Subcellular fractionation studies to identify the route of uptake and degradation of collagenase-3 localized intracellular accumulation of 125I-rat collagenase-3 initially in Golgi-associated lysosomes and later in secondary lysosomes. Maximal lysosomal accumulation of the radiolabel and stimulation of general lysosomal activity occurred after 72 h of parathyroid hormone treatment. Preventing fusion of endosomes with lysosomes (by temperature shift, colchicine, or monensin) resulted in no internalized 125I-collagenase-3 in either lysosomal fraction. Treatment of UMR cells with the above agents or ammonium chloride decreased excretion of 125I-labeled degradation products of collagenase-3. These experiments demonstrated that degradation of collagenase-3 required receptor-mediated endocytosis and sequential processing by endosomes and lysosomes. Thus, parathyroid hormone regulates the expression and synthesis of collagenase-3 as well as the abundance and functioning of the collagenase-3 receptor and the intracellular degradation of its ligand. The coordinate changes in the secretion of collagenase-3 and expression of the receptor determine the net abundance of the enzyme in the extracellular space. J Cell Physiol 177:563-574, 1998. © 1998 Wiley-Liss, Inc.
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    Journal of Cellular Physiology 177 (1998), S. 585-592 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The effect of metabolic inhibitors on nontransferrin bound iron transport by K562 cells was investigated. Incubation with 1 μM rotenone, 10 μM antimycin, or 0.5 mM 2,4-dinitrophenol effectively reduced ATP levels by ∼50%. Both the rate and extent of Fe+3 uptake were impaired in ATP-depleted cells, which display a reduced Vmax for uptake. K562 cell ferrireductase activity was also lowered by metabolic inhibitors, suggesting that the apparent energy requirements for transport reside in the reduction of Fe+3 to Fe+2. However, ATP depletion was found to inhibit the rate and extent of Fe+2 uptake as well. Thus, the transbilayer passage of Fe+2 and/or Fe+3 appears to be an energy-requiring process. These features possibly reflect properties of the transport mechanism associated with a recently identified K562 cell transport protein, called SFT for “Stimulator of Fe Transport,” since exogenous expression of its activity is also affected by ATP depletion. J Cell Physiol 177:585-592, 1998. © 1998 Wiley-Liss, Inc.
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  • 58
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    Journal of Cellular Physiology 177 (1998), S. 593-605 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Clusterin (ApoJ) is an extracellular glycoprotein expressed during processes of tissue differentiation and regression that involve programmed cell death (apoptosis). Increased clusterin expression has also been found in tumors, however, the mechanism underlying this induction is not known. Apoptotic processes in tumors could be responsible for clusterin gene activation. Alternatively, oncogenic mutations could modulate signal transduction, thereby inducing the gene. We examined the response of the rat clusterin gene to two oncogenes, Ha-ras and c-myc, in transfected Rat1 fibroblasts. While c-myc overexpression did not modify clusterin gene activity, the Ha-ras oncogene produced a seven to tenfold repression of clusterin mRNA; this down-regulation was also observed in the presence of c-myc. Since no induction of the clusterin gene was observed by the two oncogenes, we tested the alternative mechanism involving apoptosis. Growth factor withdrawal induced apoptosis, as shown by DNA degradation and micronuclei formation in the floating cells. Concomittantly we observed a three to tenfold increase in the amount of clusterin mRNA in the adhering cells of Rat1 and the c-myc transformed cell lines, and a weaker induction in the Ha-ras transformed cell line. On the basis of our results, we suggest that clusterin gene induction in the vital cells is produced by signaling molecules that are generated by the apoptotic cells. We conclude that apoptotic processes, not oncogenic mutations, are responsible for increased clusterin expression in tumors. J Cell Physiol 177:593-605, 1998. © 1998 Wiley-Liss, Inc.
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    Journal of Cellular Physiology 177 (1998), S. 618-627 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: We previously reported that the enterocytic differentiation of human colonic Caco-2 cells correlated with down-regulation of fibronectin (FN) and laminin (LN), two extracellular matrix components interacting with cell surface integrin receptors. We now investigated whether Caco-2 cell differentiation was associated with alterations in integrin signaling with special interest in the expression and activity of focal adhesion kinase (FAK) and mitogen-activated protein (MAP) kinase. The differentiation of Caco-2 cells was associated with: (1) down-regulation of β1 integrin expression at the mRNA and protein levels; (2) increased FAK expression together with decreased FAK autophosphorylation; (3) decreased FAK's ability to associate with PI3-kinase and pp60c-src; and (4) increased MAP kinase expression along with decreased MAP activity. In addition, we show that FAK and MAP kinase belong to distinct integrin signaling pathways and that both pathways remain functional during Caco-2 cell differentiation since the coating of differentiating cells on FN and LN but not on polylysine increased the tyrosine phosphorylation of FAK and of its endogenous substrate paxillin, and stimulated MAP kinase activity. In conclusion, our results provide evidence that FAK and MAP kinase, two signaling molecules activated independently by β1 integrins in Caco-2 cells, undergo alterations of both expression and activity during the enterocytic differentiation of this cell line. J Cell Physiol 177:618-627, 1998. © 1998 Wiley-Liss, Inc.
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Salivary glands contain two major epithelial cell types: acinar cells which produce the primary salivary secretion, including amylase, and ductal cells which reabsorb electrolytes but also secrete kallikrein. Here we investigated salivary acinar cell differentiation in vitro using the activity of the salivary amylase and tissue kallikrein promoters as markers of acinar cell and ductal cell differentiation, respectively. Each of the promoter sequences was cloned into a replication-deficient adenoviral vector containing the luciferase reporter gene. Previous studies showed that a human submandibular gland cell line (HSG) differentiated into acinar cells when cultured on a reconstituted basement membrane matrix (Matrigel). The luciferase activity of the amylase promoter vector (AdAMY-luc) was low in HSG cells cultured on plastic, where they grow as an epithelial monolayer. The promoter activity increased approximately tenfold when HSG cells were cultured on Matrigel and developed an acinar phenotype. Under the same conditions, the luciferase activity of the kallikrein promoter (AdKALL-luc) was not induced. Because HSG cells demonstrate acinar cell morphology, but not amylase gene expression, when cultured on laminin-1, certain soluble components of Matrigel were tested for their ability to induce the amylase promoter during in vitro differentiation of acinar cells. We find that epidermal growth factor (EGF) and transforming growth factor-alpha (TGF-α), which are present in the basement membrane, and hepatocyte growth factor (HGF) increase activity of the amylase promoter. Other basement membrane-derived growth factors such as TGF-β, basic fibroblast growth factor (bFGF), and platelet-derived growth factor (PGDF), as well as tumor necrosis factor (TNF-α), keratinocyte growth factor (KGH), nerve growth factor (NGF) and interferon gamma (IFN-γ) were inactive. This system will be further exploited to study the mechanisms by which extracellular matrix molecules and growth factors regulate salivary acinar cell differentiation. J Cell Physiol 177:628-635, 1998. Published 1998 Wiley-Liss, Inc.
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  • 61
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
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    Topics: Biology , Medicine
    Notes: The role of HSP27 in cell growth and resistance to stress was investigated using murine fibrosarcoma L929 cells (normally devoid of constitutively expressed small HSPs) and human osteoblast-like SaOS-2 cells stably transfected with a human hsp27 expression vector. Our data showed that our L929 cells were more resistant to oxidative stress than generally observed for this line. Production of HSP27 in these cells led to a marked decrease in growth rate associated with a series of phenotypical changes, including cell spreading, cellular and nuclear hypertrophy, development of an irregular outline, and a tremendous accumulation of actin stress fibers. By contrast, none of these changes was observable in SaOS-2/hsp27 transfectants overexpressing the protein product. Together, these observations are consistent with a cause-to-effect cascade relationship between increased (or induced) HSP27 expression, changes in cytoskeletal organization, and decreased growth. On the other hand, whereas the transfection of the hsp27 gene increased the cell resistance to heat in both cell lines, only in SaOS-2 cells was this associated with protection to the cytotoxic action of tumor necrosis factor-alpha (TNF-α) and etoposide. Unexpectedly, L929/hsp27 transfectants exhibited an increased sensitivity to both agents and also to H2O2. These data thus imply that different mechanisms are involved in the cell resistance to heat shock and to the cytotoxic action of TNF-α, etoposide, and H2O2. They also plead against the simple view that overexpression of a phosphorylatable HSP27 would necessarily be beneficial in terms of increased cell resistance to any type of stress. Our data further indicate that the role of HSP27 in cellular resistance to stress and in cell proliferation involves different targets and that the ultimate result of its interference with these processes depends on the intracellular context in which the protein is expressed. J Cell Physiol 177:606-617, 1998. © 1998 Wiley-Liss, Inc.
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Using an expression cloning approach, we identified and cloned a novel intracellular protein produced by osteoclasts that indirectly induces osteoclast formation and bone resorption, termed OSF. Conditioned media from 293 cells transiently transfected with the 0.9 kb OSF cDNA clone stimulated osteoclast-like cell formation in both human and murine marrow cultures in the presence or absence 10-9 M 1,25-dihydroxyvitamin D3. In addition, conditioned media from 293 cells transfected with the OSF cDNA clone enhanced the stimulatory effects of 1,25-(OH)2D3 on bone resorption in the fetal rat long bone assay. In situ hybridization studies using antisense oligomers showed expression of OSF mRNA in highly purified osteoclast-like cells from human giant cell tumors of the bone. Northern blot analysis demonstrated ubiquitous expression of a 1.3 kb mRNA that encodes OSF in multiple human tissues. Sequence analysis showed the OSF cDNA encoded a 28 kD peptide that contains a c-Src homology 3 domain (SH3) and ankyrin repeats, suggesting that it was not a secreted protein, but that it was potentially involved in cell signaling. Consistent with these data, immunoblot analysis using rabbit antisera against recombinant OSF demonstrated OSF expression in cell lysates but not in the culture media. Furthermore, recombinant OSF had a high affinity for c-Src, an important regulator of osteoclast activity. Taken together, these data suggest that OSF is a novel intracellular protein that indirectly enhances osteoclast formation and osteoclastic bone resorption through the cellular signal transduction cascade, possibly through its interactions with c-Src or other Src-related proteins. J Cell Physiol 177:636-645, 1998. © 1998 Wiley-Liss, Inc.
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The addition of dexamethasone (dex) to human fibroblast cultures has been found to elicit enhanced proliferation. This enhancement is manifested by an increase in the initial growth rate, saturation density, and proliferative life span of WI-38 fibroblast cultures grown in the presence of dex. We examined the acute effects of dex on a number of growth-related genes in WI-38 cells. Our results show a decrease in the level of the cyclin-dependent kinase inhibitor p21Waf1/Cip1/Sdi1 in response to dex. In addition, the level of the insulin-like growth factor type 1 receptor (IGF-1R) is increased in dex-treated cells. These changes are correlated with changes in the activity of the p21Waf1/Cip1/Sdi1 and IGF-1R promoters. The results presented in this report suggest that dex may delay growth arrest in response to contact inhibition, as well as during cellular senescence. Thus, dex may act at multiple levels to enhance cellular proliferation in WI-38 cells: first, to decrease the level of an inhibitor of cell-cycle progression, and second, to increase the sensitivity of WI-38 cells to the proliferative effects of IGF-1. These acute effects may cooperate with other, as yet uncharacterized effects, to result in the enhanced proliferation seen in the presence of dex. J. Cell. Physiol. 177:396-401, 1998. © 1998 Wiley-Liss, Inc.
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    Journal of Cellular Physiology 177 (1998), S. 402-410 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Potassium (K+) conductances are known to be involved in cell proliferation of a number of nonexcitable cell types. The nature of the mechanism by which K+ channel inhibition reduces cell proliferation has remained elusive despite intensive search. We investigated whether such a phenomenon could be demonstrated in excitable cells, using the GH3 pituitary cell line as a cell model. Our aims were: (1) to study the effect of K+ channel inhibition on the proliferation of GH3 cells; and (2) to investigate the putative intracellular signals involved in this inhibition. Tetraethylammonium chloride (TEA), a blocker of the calcium (Ca2+)-dependent K+ conductances of GH3, was found to reversibly inhibit cell proliferation, as measured by 3H-thymidine incorporation. Cell cycle block specifically occurred at the G1/S phase of the cell cycle. This inhibition of proliferation was observed for 1-4 mM TEA, which suppressed most of the Ca2+-activated K+ current and part of the inward rectifying K+ current, as shown by electrophysiological experiments. Increasing extracellular K+ concentrations with KCl also inhibited cell proliferation in a dose-dependent manner. Both TEA and KCl depolarized the cells and increased intracellular Ca2+ levels ([Ca2+]i), showing that, in this type of excitable cell, inhibition of cell proliferation can be associated with elevated Ca2+ levels. Ca2+ and membrane resting potential (MRP) were considered as possible messengers of this inhibition. Our results suggest that cell cycle arrest of GH3 cells by K+ channel block probably involves an additional pathway, distinct from those of Ca2+ and MRP. J. Cell. Physiol. 177:402-410, 1998. © 1998 Wiley-Liss, Inc.
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    Journal of Cellular Physiology 177 (1998), S. 387-395 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Previously, we reported that unaggressive, growth factor-dependent FET human colon carcinoma cells downregulated their transforming growth factor alpha (TGFα) expression in a quiescent state (G0/G1) induced by growth factor and nutrient deprivation (Mulder, 1991, Cancer Res., 51:2256-2262). In contrast, highly aggressive, growth factor-independent HCT116 human colon carcinoma cells aberrantly upregulated this autocrine activity in the quiescent state (Mulder, 1991, Cancer Res., 51:2256-2262; Howell et al., 1998, Mol. Cell. Biol., 18:303-313). In this report, the role of autocrine TGFα and the mechanism of its regulation of expression during reentry into the cell cycle from a noncycling growth state were determined in FET cells. Optimal induction of DNA synthesis from a quiescent state in FET cells is dependent upon autocrine TGFα as well as exogenous transferrin and insulin. Reentry into the cell cycle resulting from treatment with exogenous transferrin and insulin resulted in ∼3-fold induction of TGFα expression within 1 hr. TGFα induction was controlled at the transcription level, and the cis-controlling element was localized to the region between bp -370--201 relative to the translation start codon within the TGFα promoter. Thus neutralization of autocrine TGFα protein revealed that the induced TGFα autocrine activity was necessary for DNA synthesis and acted only in the early G1 phase of the cell cycle. Blockade of autocrine TGFα expression early in the cell cycle resulted in the reduction of DNA synthesis, whereas treatment with neutralization antibody at later times had no effect. This suggested that autocrine TGFα functions to initiate cell growth from noncycling states. This was further confirmed by the dependence of FET cells upon autocrine TGFα for colony formation in experiments where the plating density was sufficiently low to generate a lag phase in tissue culture. In contrast, TGFα autocrine activity was not required for exponential phase cells, as evidenced by the failure of TGFα neutralizing antibody to inhibit proliferation in this growth state. Taken together, these results suggest that autocrine TGFα acts primarily in the process of growth initiation by moving cells from a noncycling state back into the cell cycle, rather than supporting cell growth already initiated. J. Cell. Physiol. 177:387-395, 1998. © 1998 Wiley-Liss, Inc.
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  • 66
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Basic fibroblast growth factor (bFGF, FGF-2) is progressively lost from mammary epithelial cells as they become malignant. To investigate the effects of restoring the expression of bFGF in breast cancer cells, we constructed MCF-7 cells that permanently overexpress 18-kD cytoplasm-localizing bFGF (MCF-7/ΔAFGF(18) cells) and cells that express both the 18-kD along with the 22- and 24-kD nucleus-localizing bFGF peptides (MCF-7/NCFFGF(18,22,24) cells), using retroviral transduction. These stable cell constructs grew more slowly and had a larger fraction of their populations in the G0/G1 phase of the cell cycle than control cells. All forms of bFGF were eluted from MCF-7/NCFFGF(18,22,24) cell monolayers with 2 M NaCl, in contrast to fibroblasts that were demonstrated to secrete only the 18-kD bFGF isoform. High-affinity binding of 18-kD 125I-bFGF to these cells was significantly decreased, probably because of competitive binding by the autocrine-secreted bFGF. Recombinant 18-kD bFGF that was previously demonstrated in our laboratory to inhibit proliferation, activate MAP kinase, and induce the cyclin-dependent kinase inhibitor p21WAF1/CIP1 in MCF-7 cells, further inhibited MCF-7/ΔAFGF(18) cells but had no effect on MCF-7/NCFFGF(18,22,24) cells. The total cellular content of the high-affinity FGF receptors 1-3 was unchanged, but FGF receptor 4 was decreased in MCF-7/NCFFGF(18,22,24) cells. Both cell types overexpressing bFGF isoforms had elevated levels of the cyclin-dependent kinase inhibitor p27Kip1 but not that of p21WAF1/CIP1. In MCF-7/ΔAFGF(18) cells, FGFR1 and MAP kinase were constitutively phosphorylated. Exogenous recombinant 18-kD bFGF did not accentuate these effects but did induce an increase in the levels of p21WAF1/CIP1 corresponding to the further inhibition induced by exogenous bFGF in these cells. In MCF-7/NCFFGF(18,22,24) cells, FGFR1 and MAP kinase were not phosphorylated at baseline nor upon stimulation with recombinant bFGF, and exogenous bFGF only had a minimal effect on low steady-state p21WAF1/CIP1 levels. However, stimulation of these cells with phorbol ester or insulin did result in MAP kinase phosphorylation. While growth-inhibited in the G1 phase of the cell cycle, MCF-7/NCFFGF(18,22,24) cells retained active isoforms of cdk2 and the hyperphosphorylated form of Rb. These data suggest that high molecular weight forms of bFGF overexpressed in MCF-7 cells do not activate the receptor-mediated MAP kinase pathway, and do not induce p21WAF1/CIP1 in an autocrine manner, but inhibit proliferation through other, possibly direct nuclear signalling mechanisms. J. Cell. Physiol. 177:411-425, 1998. © 1998 Wiley-Liss, Inc.
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  • 67
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Bone marrow stromal cells (BMSCs) are a heterogeneous population of cells derived from colony-forming units-fibroblastic (CFU-Fs). These cells reside in the bone marrow cavity and are capable of differentiating into several cell phenotypes including osteoblasts, chondroblasts, hematopoiesis-supporting stromal cells, and adipocytes. However, the factors that regulate the proliferation and differentiation of the BMSC population are for the most part unknown. Since many members of the receptor tyrosine kinase (RTK) family have been shown to participate in growth control of various mesenchymal cell populations, in this study we examined the expression and function of RTKs in the BMSC population. Degenerate oligonucleotides corresponding to two conserved catalytic domains of the RTK family and RT-PCR were used initially to determine which RTKs are expressed in the human BMSC (hBMSC) system. After subcloning the amplification product generated from mRNA of a multicolony-derived hBMSC strain, PDGF receptor (β), EGF receptor, FGF receptor 1, and Axl were identified by DNA sequencing of 26 bacterial colonies. Furthermore, PDGF and EGF were found to enhance BMSC growth in a dose-dependent manner and to induce tyrosine phosphorylation of intracellular molecules, including the PDGF and EGF receptors themselves, demonstrating the functionality of these receptors. On the other hand, bFGF was found to have little effect on proliferation or tyrosine phosphorylation. Since single colony-derived hBMSC strains are known to vary from one colony to another in colony habit (growth rate and colony structure) and the ability to form bone in vivo, the expression levels of these RTKs were determined in 18 hBMSC clonal strains by semiquantitative RT-PCR and were found to vary from one clonal strain to another. While not absolutely predictive of the osteogenic capacity of individual clonal strains, on average, relatively high levels of PDGF-receptor were found in bone-forming strains, while on average, nonbone-forming strains had relatively high levels of EGF-receptor. Taken together, these results indicate that RTKs play a role in the control of hBMSC proliferation, and that the differential pattern of RTK expression may be useful in correlating the biochemical properties of individual clonal strains with their ability to produce bone in vivo. J. Cell. Physiol. 177:426-438, 1998. © 1998 Wiley-Liss, Inc.
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  • 68
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    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Vascular endothelial growth factor-C (VEGF-C) is a recently characterized member of the VEGF family of angiogenic polypeptides. We demonstrate here that VEGF-C is angiogenic in vitro when added to bovine aortic or lymphatic endothelial (BAE and BLE) cells but has little or no effect on bovine microvascular endothelial (BME) cells. As reported previously for VEGF, VEGF-C and basic fibroblast growth factor (bFGF) induced a synergistic in vitro angiogenic response in all three cells lines. Unexpectedly, VEGF and VEGF-C also synergized in the in vitro angiogenic response when assessed on BAE cells. Characterization of VEGF receptor (VEGFR) expression revealed that BME, BAE, and BLE cell lines express VEGFR-1 and -2, whereas of the three cell lines assessed, only BAE cells express VEGFR-3. We also demonstrate that VEGF-C increases plasminogen activator (PA) activity in the three bovine endothelial cell lines and that this is accompanied by a concomitant increase in PA inhibitor-1. Addition of α2-antiplasmin to BME cells co-treated with bFGF and VEGF-C partially inhibited collagen gel invasion. These results demonstrate, first, that by acting in concert with bFGF or VEGF, VEGF-C has a potent synergistic effect on the induction of angiogenesis in vitro and, second, that like VEGF and bFGF, VEGF-C is capable of altering endothelial cell extracellular proteolytic activity. These observations also highlight the notion of context, i.e., that the activity of an angiogenesis-regulating cytokine depends on the presence and concentration of other cytokines in the pericellular environment of the responding endothelial cell. J. Cell. Physiol. 177:439-452, 1998. © 1998 Wiley-Liss, Inc.
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  • 69
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Cell cycle control of histone H4 gene transcription is mediated by the multipartite promoter domain H4-Site II, which supports transcriptional activation at the G1/S phase transition and modulates basal H4 gene transcription. Proliferation-specific transcription is determined by the integrated activities of three distinct promoter factors interacting with H4-Site II: the interferon regulatory factor IRF-2 (synonymous with HiNF-M), HiNF-D (a complex between the homeodomain protein CDP-cut and the cell cycle mediators CDC2, cyclin A and pRB), as well as HiNF-P/H4TF-2. However, the contribution of HiNF-D to the enhancement and/or suppression of H4 gene transcription at specific cell cycle stages remains to be established. We used a panel of synchronized HeLa S3 cell lines containing stably integrated H4 promoter/CAT reporter gene constructs with mutations in H4-Site II. The temporal regulation of CAT mRNA accumulation under the control of the H4 promoter was analyzed by RNase protection analysis. Our main finding is that mutation of the HiNF-D/CDP-cut binding site alters the timing of histone gene activation during the cell cycle. Furthermore, our data indicate that HiNF-P/H4TF-2 may functionally compensate for HiNF-M/IRF-2 at Site II to regulate histone H4 gene transcription in HeLa S3 cervical carcinoma cells during early S phase. We postulate that HiNF-D (CDP-cut/cyclin A/CDC2/pRB containing complex) promotes HiNF-M/IRF-2 (and/or HiNF-P/H4TF-2) dependent histone H4 gene activation at the G1/S phase transition and attenuates H4 gene transcription at later cell cycle stages. The mechanistic division in the gene regulatory functions of the three H4-Site II binding proteins may ensure that histone H4 gene expression is stringently coupled with the onset of S phase in response to growth factor/cytokine-induced cell cycle progression. J. Cell. Physiol. 177:453-464, 1998. © 1998 Wiley-Liss, Inc.
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  • 70
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    Journal of Cellular Physiology 177 (1998), S. 465-473 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Human dermal fibroblasts suspended in a collagen matrix exhibit a 4-day delay in cell division, while the same cells in monolayer divided by day 1. The initial rates of 3H-thymidine incorporation by cells in monolayer or suspended in collagen were not significantly different. When suspended in collagen, there was a threefold increase in the proportion of cells in a tetraploidal (4N) DNA state compared to the same cells in monolayer. Flow cytometry analysis and 3H-thymidine incorporation studies identified the delay of cell division as a consequence of a block in the G2/M of the cell cycle and not an inhibition of DNA synthesis. The inclusion of 150 μ/ml of hyaluronic acid (HA) in the manufacture of fibroblast populated collagen lattices (FPCL) caused a stimulation of cell division, as determined by cell counting; increased the expression of tubulin, as determined by Western blot analysis; and reduced the proportion of cells in a 4N state, as determined by flow cytometry. HA added to the same cells growing in monolayer produced a minimal increase in the rate of cell division or DNA synthesis. HA supplementation of FPCLs stimulated cell division as well as tubulin concentrations, but it did not enhance lattice contraction. The introduction of tubulin isolated from pig brain or purchased tubulin into fibroblasts by electroporation prior to their transfer into collagen lattices promoted cell division in the first 24 hours and enhanced FPCL contraction. It is proposed that tubulin protein, the building blocks of microtubules, is limited in human fibroblasts residing within a collagen matrix. When human fibroblasts are suspended in collagen, one effect of added HA may be to stimulate the synthesis of tubulin which assists cells through the cell cycle. J. Cell. Physiol. 177:465-473, 1998. © 1998 Wiley-Liss, Inc.
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  • 71
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    Journal of Cellular Physiology 177 (1998), S. 474-482 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: In this study we examined the regulation of cdk1 expression in normal human epidermal keratinocytes (HEKs) and neoplastic keratinocytes. Keratinocytes were growth-arrested by allowing the cells to grow to confluence or by treating them with interferon-gamma (IFNγ) or 12-O-tetradecanoyl phorbol-13-acetate (TPA). RT-PCR and Western blot analysis demonstrated that cdk1 was profoundly reduced in growth-arrested HEKs when compared with dividing HEKs. In contrast, a squamous carcinoma cell line, SCC25, did not growth-arrest in response to growth inhibitors and did not downregulate cdk1 expression. Transfection of HEKs with a reporter gene driven off a 2.5-kb fragment of the human cdk1 promoter indicated that the downregulation of cdk1 upon growth arrest was transcriptional. Deletion mapping of the cdk1 promoter indicated that a repressor region was located between -949--722 bp. This repressor region was not operative in the SCC25 cells. Examination of DNA:protein binding complexes by gel-shift analysis indicated that nuclear factors from both proliferative and growth-arrested cells bound to the DNA fragment spanning -949--722 bp. Further analysis revealed that this binding could be resolved into a constitutive and growth arrest-specific complex that bound in a similar fashion to regions spanning -892--831 bp and -831--774 bp, respectively. The putative growth arrest-specific complex was not found in contact-inhibited fibroblasts and was found at very low levels in SCC25 cells, indicating that the putative repressor binding was growth arrest-specific and possibly keratinocyte-specific. The binding complexes bound to these two fragments were localized, by competition analysis, to regions -874--853 bp and -830--800 bp. This is the first report of a transcriptional repressor being operative during keratinocyte growth arrest. J. Cell. Physiol. 177:474-482, 1998. © 1998 Wiley-Liss, Inc.
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  • 72
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    Journal of Cellular Physiology 177 (1998), S. 483-492 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Treatment with the sulfhydryl oxidant diamide denatures and aggregates cellular proteins, which prior studies have implicated as an oxidative damage that activates the heat shock transcription factor and induces thermotolerance. This study was initiated to further characterize cellular response to diamide-denatured proteins, including their involvement in diamide cytotoxicity. Cytotoxic diamide exposures at 37.0°C denatured and aggregated cellular proteins in a manner that was proportional to cell killing, but this correlation was different than that established for heated cells. Diamide exposures at 24.0°C were orders of magnitude less cytotoxic, with little additional killing occurring after diamide was removed and cells were returned to 37.0°C. Thus, protein denaturation that occurred at 37.0°C, after proteins were chemically destabilized by diamide at 24.0°C [Freeman et al., J. Cell. Physiol., 164:356-366 (1995) Senisterra et al., Biochemistry 36: 11002-11011 (1997)], had little effect on cell killing. Thermotolerance protected cells against diamide cytotoxicity but did not reduce the amount of denatured and aggregated protein observed immediately following diamide exposure. However, denatured/aggregated proteins in thermotolerant cells were disaggregated within 17 h following diamide exposure, while no disaggregation was observed in nontolerant cells. This more rapid disaggregation of proteins may be one mechanism by which thermotolerance protects cells against diamide toxicity, as it has been postulated to do against heat killing. As with heat shock, nontoxic diamide exposures induced maximal tolerance against heat killing; however, there was no detectable, increased synthesis of heat shock proteins. Thus, diamide treatment proved to be a reproducible procedure for inducing a phase of thermotolerance that does not require new heat shock protein (HSP) synthesis, without having to use transcription or translation inhibitors to suppress HSP gene expression.These results complement those from studies with other stresses to establish the importance of protein denaturation/aggregation as a cytotoxic consequence of stress and a trigger for thermotolerance induction. The data also illustrate that differences in how proteins are denatured and aggregated can affect their cytotoxicity and the manner in which thermotolerance is expressed. J. Cell. Physiol. 177:483-492, 1998. © 1998 Wiley-Liss, Inc.
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  • 73
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    Journal of Cellular Physiology 177 (1998), S. 499-499 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: No abstract.
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  • 74
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    Journal of Cellular Physiology 177 (1998), S. 501-506 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: CDK9 is a cdc2-related kinase protein. Previously named PITALRE, this protein is a serine-threonine kinase involved in many physiological processes. Unlike most of the cdc2-like kinases, its activity is not cell cycle-regulated. CDK9 acts preferentially in processes different from cell-cycle regulation, such as differentiation. Its cyclin partners, cyclins of T family, recently have been isolated. CDK9 immunoprecipitates with several unidentified polypeptides that may regulate its kinase activity. CDK9 has been shown to associate with the HIV-Tat protein, suggesting a possible involvement in AIDS. CDK9 recently was shown to be responsible for the kinase activity associated with the TAK complex and with the P-TEFb complex, suggesting activity also in the transcription process. J Cell Physiol 177:501-506, 1998. © 1998 Wiley-Liss, Inc.
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  • 75
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    Journal of Cellular Physiology 177 (1998), S. 493-498 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Ultraviolet light A (UVA) is shown to play an augmentative or synergistic role with UVB in pathophysiological conditions induced by solar radiation. Thus, UVA would contribute significantly to the development of skin malignancies. It remains unclear, however, how UVA contributes to solar radiation-induced immune suppression. Keratinocytes (KC) produce cytokines which are a significant mediator of inflammatory and immunologic reactions in skin exposed to solar radiation and are a potent mediator in the induction of immune suppression. To examine if UVA alters the expression and production of cytokines from KC, normal human keratinocytes (HuSK) were cultured and exposed to UVA at doses ranging between 2.5 and 20 kJ/m2. Constitutive expression of the p35 subunit of interleukin (IL)-12 was detected by reverse transcription-polymerase chain reaction (RT-PCR) and the p40 subunit was induced by UVA irradiation dose dependently. IL-12 protein was also detected in the supernatants from UVA-irradiated HuSK by enzyme-linked imuunosorbent assay (ELISA) and confirmed by a bioassay. On the other hand, the same doses of UVA did not induce IL-10 mRNA or IL-10 protein which has been shown to be one of the cytokines responsible for the induction of UVB-induced immunosuppression. Considering that IL-12 promotes activation of Th1 cells and prevents the activation of Th2 cells and that administration of IL-12 has been shown to block the induction of immune suppression in UV-irradiated animals, our results suggest that UVA modulates skin immune function distinctively from UVB by affecting the balance between IL-10 and IL-12 produced from KC. J. Cell. Physiol. 177:493-498, 1998. © 1998 Wiley-Liss, Inc.
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  • 76
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    Journal of Cellular Physiology 177 (1998), S. 507-517 
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Neuropeptides, including mammalian bombesin-like peptides, act as potent cellular growth factors and have been implicated in a variety of normal and abnormal processes, including development, inflammation, and malignant transformation. These signaling peptides exert their characteristic effects on cellular processes by binding to specific G protein-coupled receptors (GPCR) on the surface of their target cells. Typically, the binding of a neuropeptide to its cognate GPCR triggers the activation of multiple signal transduction pathways that act in a synergistic and combinatorial fashion to relay the mitogenic signal to the nucleus and promote cell proliferation. A rapid increase in the synthesis of lipid-derived second messengers with subsequent activation of protein phosphorylation cascades is an important early response to neuropeptides. An emerging theme in signal transduction is that these agonists also induce rapid and coordinate tyrosine phosphorylation of cellular proteins including the nonreceptor tyrosine kinase p125fak and the adaptor proteins p130cas and paxillin. This tyrosine phosphorylation pathway depends on the integrity of the actin cytoskeleton and requires functional Rho. The purpose of this article is to review recent advances in unraveling the pathways that play a role in transducing mitogenic and migratory responses induced by G protein-coupled neuropeptide receptor agonists. J Cell Physiol 177:507-517, 1998. © 1998 Wiley-Liss, Inc.
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  • 77
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The pentameric B subunit of verotoxin (VT) mediates the attachment to cell surface globotriaosyl ceramide (Gb3) to facilitate receptor-mediated endocytosis of the toxin. In highly toxin-sensitive tumor cells, the holotoxin and VT1 B subunit is targeted intracellularly to elements of the endoplasmic reticulum (ER)/nuclear membrane. In less sensitive cells, the toxin is targeted to components of the Golgi apparatus. We have studied two cell systems: the induced VT hypersensitivity of human astrocytoma cell lines cultured in the presence of sodium butyrate (compared to sodium propionate and capronate) and the increased VT sensitivity of multiple drug-resistant mutants as compared to parental human ovarian carcinoma cells. In both cases, a difference in the intracellular retrograde transport of the receptor-bound internalized toxin to the ER/nuclear envelope, as opposed to the Golgi, correlated with a 〉1,000-fold increase in cell sensitivity to VT. This change in intracellular routing may be due to sorting of Gb3 fatty acid isoforms, since nuclear targeting was found in turn to correlate with the preferential synthesis of Gb3 containing shorter chain (primarily C16) fatty acid species. We propose that the isoform-dependent traffic of Gb3 from the cell surface to the ER/nuclear membrane provides a new signal transduction pathway for Gb3 binding proteins. J Cell Physiol 177:646-660, 1998. © 1998 Wiley-Liss, Inc.
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  • 78
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    Journal of Cellular Biochemistry 71 (1998), S. 313-327 
    ISSN: 0730-2312
    Keywords: articular cartilage repair ; tissue engineering ; collagen type II ; collagen type IX ; collagen network ; pyridinium crosslinks ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: The function of articular cartilage as a weight-bearing tissue depends on the specific arrangement of collagen types II and IX into a three-dimensional organized collagen network that can balance the swelling pressure of the proteoglycan/ water gel. To determine whether cartilage engineered in vitro contains a functional collagen network, chondrocyte-polymer constructs were cultured for up to 6 weeks and analyzed with respect to the composition and ultrastructure of collagen by using biochemical and immunochemical methods and scanning electron microscopy. Total collagen content and the concentration of pyridinium crosslinks were significantly (57% and 70%, respectively) lower in tissue-engineered cartilage that in bovine calf articular cartilage. However, the fractions of collagen types II, IX, and X and the collagen network organization, density, and fibril diameter in engineered cartilage were not significantly different from those in natural articular cartilage. The implications of these findings for the field of tissue engineering are that differentiated chondrocytes are capable of forming a complex structure of collagen matrix in vitro, producing a tissue similar to natural articular cartilage on an ultrastructural scale. J. Cell. Biochem. 71:313-327, 1998. © 1998 Wiley-Liss, Inc.
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  • 79
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    Journal of Cellular Biochemistry 71 (1998), S. 328-339 
    ISSN: 0730-2312
    Keywords: insulin ; heart ; development ; PI 3-kinase ; protein kinase B ; S6 kinase ; casein kinase 2 ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: The control of glucose uptake and glycogen metabolism by insulin in target organs is in part mediated through the regulation of protein-serine/ threonine kinases. In this study, the expression and phosphotransferase activity levels of some of these kinases in rat heart ventricle were measured to investigate whether they might mediate the shift in the energy dependency of the developing heart from glycogen to fatty acids. Following tail-vein injection of overnight fasted adult rats with 2 U of insulin per kg body weight, protein kinase B (PKB), the 70-kDa ribosomal S6 kinase (S6K), and casein kinase 2 (CK2) were activated (30-600%), whereas the MAP/ extracellular regulated kinases (ERK)1 and ERK2 were not stimulated under these conditions. When the expression levels of the insulin-activated kinases were probed with specific antibodies in ventricular extracts from 1-, 10-, 20-, 50-, and 365-day-old rats, phosphatidylinositol 3-kinase (PI3K), PKB, S6K, and CK2 were downregulated (40-60%) with age. By contrast, ventricular glycogen synthase kinase-3β (GSK3β) protein levels were maintained during postnatal development. Similar findings were obtained when the expression of these kinases was investigated in freshly isolated ventricular myocytes, where they were detected predominantly in the cytosolic fraction of the myocytes. Compared to other adult rat tissues such as brain and liver, the levels of PI3K, PKB, S6K, and GSK3β were relatively low in the heart. Even though CK2 protein and activity levels were reduced by ∼60% in 365 day as compared to 1-day-old rats, expression of CK2 in the adult heart was as high as detected in any of the other rat tissues. The high basal activities of CK2 in early neonatal heart may be associated with the proliferating state of myocytes. J. Cell. Biochem. 71:328-339, 1998. © 1998 Wiley-Liss, Inc.
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  • 80
    ISSN: 0730-2312
    Keywords: vitamin D analogues ; vitamin D receptor ; ligand binding ; limited protease digestion ; ligand-dependent gel shift assay ; gene regulation ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: The nuclear hormone 1α,25-dihydroxyvitamin D3 (VD) has important cell-regulatory functions but also a strong calcemic effect. Therefore, various VD analogues have been synthesized and screened for their biological profile. In order to gain more insight into the molecular basis of the high antiproliferative but low calcemic action of the VD analogue EB1089, we characterized this compound in comparison to five structurally related VD analogues. The activities of the six VD analogues in in vitro assays (limited protease digestion assays for determining interaction with monomeric vitamin D receptor (VDR), ligand-dependent gel shift assays for showing the increase of DNA binding of VDR-retinoid X receptor (RXR) heterodimers, and reporter gene assays on different types of VD response elements for demonstrating the efficacy in nuclear VD signalling) were found to represent their biological potency (antiproliferative effect on different malignant cell lines). In this series, EB1089 proved to be the most potent VD analogue; that is, every structural modification (20-epi configuration, cis-configuration at position C24, or changes at the ethyl groups at position C25) appeared to reduce the determined activities mediated through the VDR of these analogues. Moreover, the modifications of EB1089 resulted in a loss of VD response element selectivity, suggesting that this parameter is very critical for the biological profile of this VD analogue. J. Cell. Biochem. 71:340-350, 1998. © 1998 Wiley-Liss, Inc.
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  • 81
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    Journal of Cellular Biochemistry 71 (1998), S. 363-374 
    ISSN: 0730-2312
    Keywords: nuclear matrix proteins ; preparation method ; two-dimensional polyacrylamide gel electrophoresis ; heterogeneous nuclear ribonucleoproteins ; vanadyl ribonucleoside complexes ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Comparative analysis of nuclear matrix proteins by two-dimensional electrophoresis may be greatly impaired by copurifying cytoskeletal proteins. The present data show that the bulk of adhering cytofilaments may mechanically be removed by shearing of nuclei pretreated with vanadyl ribonucleoside complexes. Potential mechanisms of action not based on ribonuclease inhibition are discussed. To individually preserve the integrity of nuclear structures, we developed protocols for the preparation of nuclear matrices from three categories of cells, namely leukocytes, cultured cells, and tissue cells. As exemplified with material from human lymphocytes, cultured amniotic cells, and liver tissue cells, the resulting patterns of nuclear matrix proteins appeared quite similar. Approximately 300 spots were shared among the cell types. Forty-nine of these were identified, 21 comprising heterogeneous nuclear ribonucleoproteins. Heterogeneous nuclear ribonucleoproteins L and nuclear lamin B2 isoforms were identified by amino acid sequencing and mass spectrometry. However, individually expressed proteins, such as the proliferating cell nuclear antigen, also pertained following application of the protocols. Thus, enhanced resolution and comparability of proteins improve systematic analyses of nuclear matrix proteins from various cellular sources. J. Cell. Biochem. 71:363-374, 1998. © 1998 Wiley-Liss, Inc.
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  • 82
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    Journal of Cellular Biochemistry 71 (1998), S. 375-381 
    ISSN: 0730-2312
    Keywords: insulin-like growth factor-I ; insulin-like growth factor binding protein-5 ; smooth muscle cells ; atherosclerosis ; substratum ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Insulin-like growth factor binding protein-5 (IGFBP-5) is synthesized and secreted by smooth muscle cells (SMC). IGFBP-5 synthesis is stimulated five- to sixfold by IGF-I, and IGFBP-5 has been shown to augment IGF-I-stimulated DNA synthesis in this cell type. The ability of IGFBP-5 to augment the SMC response to IGF-I is dependent upon its binding to extracellular matrix. A highly charged region of IGFBP-5 that contains amino acids in positions 201-218 has been shown to mediate binding of IGFBP-5 to human fibroblast extracellular matrix (ECM), and a synthetic peptide containing this sequence inhibits IGFBP-5 binding to fibroblast ECM. In this study we show that exposure of SMC cultures that are constituitively synthesizing IGFBP-5 to a synthetic peptide (termed peptide A) containing this sequence has no effect on its synthesis but reduces its abundance within the ECM. The addition of increasing concentrations of the peptide to SMC cultures resulted in a concentration-dependent reduction in ECM-associated IGFBP-5. In contrast, a control peptide (peptide B), which contained the region of amino acids in positions 131-141 and had a similar charge-to-mass ratio, caused a minimal decrease in ECM binding. This effect was functionally significant since the addition of 10 μg/ ml of peptide A inhibited the cellular replication response to 10 ng/ ml IGF-I by 51%, and peptide B had no effect. The effects of peptide A were not due to nonspecific cytotoxicity since it had no inhibitory effect on the response of these cells to human serum and was associated with only minimal inhibition of the cellular response to platelet-derived growth factor. The findings suggest that inhibiting IGFBP-5 binding to porcine SMC ECM results in reduced cellular responses to IGF-I. J. Cell. Biochem. 71:375-381, 1998. © 1998 Wiley-Liss, Inc.
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  • 83
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    Journal of Cellular Biochemistry 71 (1998), S. 382-391 
    ISSN: 0730-2312
    Keywords: dexamethasone ; bone marrow cell cultures ; IGF-I ; vertebrae ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Osteoblast-like cell cultures have been established from the marrow of adult rat vertebrae. We have simultaneously examined the response to dexamethasone (dex) treatment in cultures of young adult female vertebral and femoral marrow cells. Alkaline phosphatase (AP) activity was analyzed as well as the expression of mRNAs for osteocalcin (OC) and insulin-like growth factor I (IGF-I). The vertebral and femoral marrow cells were maintained for 7 days in primary culture with or without 10-8 M dex and then 6 days in secondary culture without dex or with 10-8 M or 10-7 M dex. All cells were examined on day 6 of secondary culture. Vertebral and femoral cultures each expressed the highest AP enzyme levels when grown with dex in primary culture (10-8 M) and secondary culture (10-7 M). Under all experimental conditions, vertebral cultures had lower AP enzyme activity than femoral cultures. When dex was omitted from secondary culture, OC gene expression was not detected in either vertebral or femoral passaged cells even if dex was present in primary culture. For dex conditions where OC was expressed, vertebral cultures had higher OC mRNA steady-state levels than femoral cultures. IGF-I gene expression was detected by Northern analysis in both vertebral and femoral secondary cultures. However, vertebral marrow cultures had much higher IGF-I mRNA levels compared to femoral cultures whether or not dex was present in primary culture. These findings demonstrate that dex supports the differentiation of both vertebral and femoral adult marrow osteogenic cells into osteoblasts. Our results support the hypothesis that osteoblastic marrow cultures differ depending upon which location in the skeleton they are from and that there are skeletal site-dependent differences in the insulin-like growth factor system components. J. Cell. Biochem. 71:382-391, 1998. © 1998 Wiley-Liss, Inc.
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  • 84
    ISSN: 0730-2312
    Keywords: apoptosis ; necrosis ; phospholipases ; tumor necrosis factor ; Fas ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Phospholipases generate important secondary messengers in several cellular processes, including cell death. Tumor necrosis factor (TNF) can induce two distinct modes of cell death, viz. necrosis and apoptosis. Here we demonstrate that phospholipase D (PLD) and cytosolic phospholipase A2 (cPLA2) are differentially activated during TNF-induced necrosis or apoptosis. Moreover, a comparative study using TNF and anti-Fas antibodies as cell death stimuli showed that PLD and cPLA2 are specifically activated by TNF. These results indicate that both the mode of cell death and the type of death stimulus determine the potential role of phospholipases as generators of secondary messengers. J. Cell. Biochem. 71:392-399, 1998. © 1998 Wiley-Liss, Inc.
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  • 85
    ISSN: 0730-2312
    Keywords: IGFBP ; cAMP ; PKA ; prostaglandin ; bone ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Insulin-like growth factor (IGF)-I and IGF-II are expressed at biologically effective levels by bone cells. Their stability and activity are modulated by coexpression of IGF binding proteins (IGFBPs). Secreted IGFBPs may partition to soluble, cell-associated, and matrix-bound compartments. Extracellular localization may sequester, store, or present IGFs to appropriate receptors. Of the six IGFBPs known, rat osteoblasts synthesize all but IGFBP-1. Of these, IGFBP-3, -4, and -5 mRNAs are induced by an increase in cAMP. Little is known about extracellular IGFBP localization in bone and nothing about IGFBP expression by nonosteoblastic periosteal bone cells. We compared basal IGFBP expression in periosteal and osteoblast bone cell cultures and assessed the effects of changes in cAMP-dependent protein kinase A or protein kinase C. Basal IGFBP gene expression differed principally in that more IGFBP-2 and -5 occurred in osteoblast cultures, and more IGFBP-3 and -6 occurred in periosteal cultures. An increase in cAMP enhanced IGFBP-3, -4, and -5 mRNA and accordingly increased soluble IGFBP-3, -4, and -5 and matrix-bound IGFBP-3 and -5 in both bone cell populations. In contrast, protein kinase C activators suppressed IGFBP-5 mRNA, and its basal protein levels remained very low. We also detected low Mr bands reactive with antisera to IGFBP-2, -3, and -5, suggesting proteolytic processing or degradation. Our studies reveal that various bone cell populations secrete and bind IGFBPs in selective ways. Importantly, inhibitory IGFBP-4 does not significantly accumulate in cell-associated compartments, even though its secretion is enhanced by cAMP. Because IGFBPs bind IGFs less tightly in cell-bound compartments, they may prolong anabolic effects by agents that increase bone cell cAMP. J. Cell. Biochem. 71:351-362, 1998. © 1998 Wiley-Liss, Inc.
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  • 86
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    Journal of Cellular Biochemistry 72 (1998), S. 8-17 
    ISSN: 0730-2312
    Keywords: eukaryote ; DNA replication ; replication origin ; pre-replication complex ; initiation proteins ; origin recognition complex ; DNA unwinding ; nuclear structure ; chromatin structure ; DNA methylation ; animal development ; metazoa ; mammal ; frog ; fly ; yeast ; Xenopus ; Drosophila ; Sciara ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Our understanding of the process by which eukaryotes regulate initiation of DNA replication has made remarkable advances in the past few years, thanks in large part to the explosion of genetic and biochemical information on the budding yeast, Saccharomyces cerevisiae. At least three major concepts have emerged: 1) The sequence of molecular events that determines when replication begins and how frequently each replication site is used are conserved among most, if not all, eukaryotes; 2) specific replication origins are used in most, if not all, eukaryotes that consist of a flexible modular anatomy; and 3) epigenetic factors such as chromatin structure and nuclear organization determine which of many potential replication origins are used at different stages in animal development. Thus, the current state of our knowledge suggests a simple unifying concept - all eukaryotes utilize the same basic proteins and DNA sequences to initiate replication, but the metazoa can change both the number and locations of replication origins in response to the demands of animal development. J. Cell. Biochem. Suppls. 30/31:8-17, 1998.
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  • 87
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    Journal of Cellular Biochemistry 72 (1998), S. 168-176 
    ISSN: 0730-2312
    Keywords: cadherin ; catenin ; differentiation ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Cadherins form a family of cell-cell adhesion proteins that are critical to normal embryonic development. Expression of the various family members is regulated in a complex pattern during embryogenesis. Both reduced and inappropriate expression of cadherins have been associated with abnormal tissue formation in embryos and tumorigenesis in mature organisms. Evidence is accumulating that signals unique to individual members of the cadherin family, as well as signals common to multiple cadherins, contribute to the differentiated phenotype of various cell types. While a complete understanding of the regulation of cadherin expression of the molecular nature of intracellular signaling downstream of cadherin adhesion is essential to an understanding of embryogenesis and tumorigenesis, our knowledge in both areas is inadequate. Clearly, elucidating the factors and conditions that regulate cadherin expression and defining the signaling pathways activated by cadherins are frontiers for future research. J. Cell. Biochem. Suppls. 30/31:168-176, 1998. © 1998 Wiley-Liss, Inc.
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  • 88
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    Journal of Cellular Biochemistry 72 (1998), S. 129-136 
    ISSN: 0730-2312
    Keywords: protein kinase CK2 ; holoenzyme ; α- and β-subunits ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Protein kinase CK2 is a ubiquitous eukaryotic ser/thr protein kinase. The active holoenzyme is a heterotetrameric protein composed of catalytic (α and α′) and regulatory (β) subunits that phosphorylates many different protein substrates and appears to be involved in the regulation of cell division. Despite important structural studies, the intimate details of the interactions of the α catalytic subunits with the β regulatory subunits are unknown. Recent evidence that indicates that both CK2 subunits can interact promiscuously with other proteins in a manner that excludes the binding of their complementary CK2 partners has opened the possibility that the phosphorylating activity of this enzyme may be regulated in a novel way. These alternative interactions could limit the in vivo availability of CK2 subunits to generate fully active holoenzyme CK2 tetramers. Likewise, variations in the ratio of α- and β-subunits could determine the activity of several phosphorylating and dephosphorylating activities. The promiscuity of the CK2 subunits can be extrapolated to a more widespread phenomenon in which “wild-card” proteins could act as general switches by interacting and regulating several catalytic activities. J. Cell. Biochem. Suppls. 30/31:129-136, 1998. © 1998 Wiley-Liss, Inc.
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  • 89
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    Journal of Cellular Biochemistry 72 (1998), S. 177-184 
    ISSN: 0730-2312
    Keywords: nucleosome ; chromosomes ; DNA ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: No abstract.
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  • 90
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    Journal of Cellular Biochemistry 72 (1998), S. 194-202 
    ISSN: 0730-2312
    Keywords: acute leukemias ; hematopoietic cells ; histone deacetylase complexes ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Accumulating evidence points to a connection between cancer and transcriptional control by histone acetylation and deacetylation. This is particularly true with regard to the acute leukemias, many of which are caused by fusion proteins that have been created by chromosomal translocations. Genetic rearrangements that disrupt the retinoic acid receptor-α and acute myeloid leukemia-1 genes create fusion proteins that block terminal differentiation of hematopoietic cells by repressing transcription. These fusion proteins interact with nuclear hormone co-repressors, which recruit histone deacetylases to promoters to repress transcription. This finding suggests that proteins within the histone deacetylase complexes may be potential targets for pharmaceutical intervention in many leukemia patients. J. Cell. Biochem. Suppls. 30/31:194-202, 1998. © 1998 Wiley-Liss, Inc.
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  • 91
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    Journal of Cellular Biochemistry 72 (1998), S. 185-193 
    ISSN: 0730-2312
    Keywords: steroid receptor action ; co-repressors ; co-activators ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: During the past few years, our understanding of nuclear receptor action has dramatically improved as a result of the identification and functional analysis of co-regulators such as factors involved in chromatin remodeling, transcription intermediary factors (co-repressors and co-activators), and direct interactions with the basal transcriptional machinery. Furthermore, the elucidation of the crystal structures of the empty ligand-binding domains of the nuclear receptor and of complexes formed by the nuclear receptor's ligand-binding domain bound to agonists and antagonists has contributed significantly to our understanding of the early events of nuclear receptor action. However, the picture of hormone- and hormone receptor-mediated mechanisms of gene regulation remain incomplete and extremely complicated when one also considers the “nontraditional” interactions of hormone-activated nuclear receptors, for example, interactions between the activated steroid receptors and components of the chromatin/nuclear matrix; and finally the nongenomic effects that steroid hormones can exhibit with other signaling pathways. In this prospectus on steroid receptors, we discuss the implications of various steroid hormone and nuclear receptor interactions and potential future directions of investigation. J. Cell. Biochem. Suppls. 30/31:185-193, 1998. © 1999 Wiley-Liss, Inc.
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  • 92
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    Journal of Cellular Biochemistry 72 (1998), S. 214-219 
    ISSN: 0730-2312
    Keywords: nucleus ; nuclear envelope ; nuclear export ; nuclear import ; regulation ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: The control of transcription and translation is of fundamental importance in cell biology. In this regard, the nuclear envelope is in a unique position to contribute to the regulation of these events, by directing macromolecular exchanges between the nucleus and cytoplasm. Such exchanges occur through the nuclear pore complexes, mainly by signal-mediated processes. Different signals are required for import and export. Specific cytoplasmic or nuclear receptors initially bind the signal-containing substrate, and the complex subsequently interacts with the pores. Additional factors then assist in translocation across the envelope. Current research is focused mainly on further characterization of transport receptors, translocation factors, as well as components of the nuclear pore complex, i.e., the nucleoporins. The ultimate goal is to understand the molecular interactions that occur among the different components of the transport apparatus, the energy sources for transport, and how variations in transport capacity are generated. J. Cell. Biochem. Suppls. 30/31:214-219, 1998. © 1998 Wiley-Liss, Inc.
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  • 93
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    Journal of Cellular Biochemistry 72 (1998), S. 220-231 
    ISSN: 0730-2312
    Keywords: nuclear architecture ; gene expression ; tumor cells ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Functional interrelationships between components of nuclear architecture and control of gene expression are becoming increasingly evident. There is growing appreciation that multiple levels of nuclear organization integrate the regulatory cues that support activation and suppression of genes as well as the processing of gene transcripts. The linear organization of genes and promoter elements provide the potential for responsiveness to physiological regulatory signals. Parameters of chromatin structure and nucleosome organization support synergism between activities at independent regulatory sequences and render promoter elements accessible or refractory to transcription factors. Association of genes, transcription factors, and the machinery for transcript processing with the nuclear matrix facilitates fidelity of gene expression within the three-dimensional context of nuclear architecture. Mechanisms must be defined that couple nuclear morphology with enzymatic parameters of gene expression. The recent characterization of factors that mediate chromatin remodeling and intranuclear targeting signals that direct transcription factors to subnuclear domains where gene expression occurs, reflect linkage of genetic and structural components of transcriptional control. Nuclear reorganization and aberrant intranuclear trafficking of transcription factors for developmental and tissue-specific control that occurs in tumor cells and in neurological disorders provides a basis for high resolution diagnostics and targeted therapy. J. Cell. Biochem. Suppls. 30/31:220-231, 1998. © 1998 Wiley-Liss, Inc.
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  • 94
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    Journal of Cellular Biochemistry 72 (1998), S. 232-237 
    ISSN: 0730-2312
    Keywords: cytoskeleton, mechanotransduction, integrins, cell architecture, tensegrity ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: The field of molecular cell biology has experienced enormous advances over the last century by reducing the complexity of living cells into simpler molecular components and binding interactions that are amenable to rigorous biochemical analysis. However, as our tools become more powerful, there is a tendency to define mechanisms by what we can measure. The field is currently dominated by efforts to identify the key molecules and sequences that mediate the function of critical receptors, signal transducers, and molecular switches. Unfortunately, these conventional experimental approaches ignore the importance of supramolecular control mechanisms that play a critical role in cellular regulation. Thus, the significance of individual molecular constituents cannot be fully understood when studied in isolation because their function may vary depending on their context within the structural complexity of the living cell. These higher-order regulatory mechanisms are based on the cell's use of a form of solid-state biochemistry in which molecular components that mediate biochemical processing and signal transduction are immobilized on insoluble cytoskeletal scaffolds in the cytoplasm and nucleus. Key to the understanding of this form of cellular regulation is the realization that chemistry is structure and hence, recognition of the importance of architecture and mechanics for signal integration and biochemical control. Recent work that has unified chemical and mechanical signaling pathways provides a glimpse of how this form of higher-order cellular control may function and where paths may lie in the future. J. Cell. Biochem. Suppls. 30/31:232-237, 1998. © 1998 Wiley-Liss, Inc.
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  • 95
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    Journal of Cellular Biochemistry 72 (1998), S. 250-263 
    ISSN: 0730-2312
    Keywords: signal transduction ; cell adhesion complexes ; membrane skeleton ; nucleo-cytoplasmic translocation ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Understanding how the information is conveyed from outside to inside the cell is a critical challenge for all biologists involved in signal transduction. The flow of information initiated by cell-cell and cell-extracellular matrix contacts is mediated by the formation of adhesion complexes involving multiple proteins. Inside adhesion complexes, connective membrane skeleton (CMS) proteins are signal transducers that bind to adhesion molecules, organize the cytoskeleton, and initiate biochemical cascades. Adhesion complex-mediated signal transduction ultimately directs the formation of supramolecular structures in the cell nucleus, as illustrated by the establishment of multi complexes of DNA-bound transcription factors, and the redistribution of nuclear structural proteins to form nuclear subdomains. Recently, several CMS proteins have been observed to travel to the cell nucleus, suggesting a distinctive role for these proteins in signal transduction. This review focuses on the nuclear translocation of structural signal transducers of the membrane skeleton and also extends our analysis to possible translocation of resident nuclear proteins to the membrane skeleton. This leads us to envision the communication between spatially distant cellular compartments (i.e., membrane skeleton and cell nucleus) as a bidirectional flow of information (a dynamic reciprocity) based on subtle multilevel structural and biochemical equilibria. At one level, it is mediated by the interaction between structural signal transducers and their binding partners, at another level it may be mediated by the balance and integration of signal transducers in different cellular compartments. J. Cell. Biochem. Suppls. 30/31:250-263, 1998. © 1998 Wiley-Liss, Inc.
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  • 96
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    Journal of Cellular Biochemistry 72 (1998), S. 284-285 
    ISSN: 0730-2312
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: No abstract.
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  • 97
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    Journal of Cellular Biochemistry 72 (1998), S. 297-303 
    ISSN: 0730-2312
    Keywords: tissue engineering ; biomaterials ; cell culture ; polymers ; transplants ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: This article reviews the important developments in the field of tissue engineering over the last 10 years. Research in the area of biomaterials is examined from the perspective of providing the foundation for the development of tissue engineering. Early efforts combining cells with biocompatible materials are described and applications of this technology presented, with particular focus on uses in orthopaedics and maxillofacial surgery. The basic principles of tissue engineering and state-of-the-art technology in cell biology and materials science as used currently in the field are presented. Finally, futures challenges are outlined from the perspective of integrating technologies from medicine, biology, and engineering, in hopes of translating tissue engineering to clinical applications. J. Cell. Biochem. Suppls. 30/31:297-303, 1998. © 1998 Wiley-Liss, Inc.
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  • 98
    ISSN: 0730-2312
    Keywords: EST ; cDNA microarray ; RDA ; osteoblast differentiation ; pax-6 ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Elucidation of the changes in gene expression associated with biological processes is a central problem in biology. Advances in molecular and computational biology have led to the development of powerful, high-thoughput methods for the analysis of differential gene expression. These tools have opened up new opportunities in disciplines ranging from cell and developmental biology to drug development and pharmacogenomics. In this review, the attributes of five commonly used differential gene expression methods are discussed: expressed sequence tag (EST) sequencing, cDNA microarray hybridization, subtractive cloning, differential display, and serial analysis of gene expression (SAGE). The application of EST sequencing and microarray hybridization is illustrated by the discovery of novel genes associated with osteoblast differentiation. The application of subtractive cloning is presented as a tool to identify genes regulated in vivo by the transcription factor pax-6. These and other examples illustrate the power of genomics for discovering novel genes that are important in biology and which also represent new targets for drug development. The central theme of the review is that each of the approaches to identifying differentially expressed genes is useful, and that the experimental context and subsequent evaluation of differentially expressed genes are the critical features that determine success. J. Cell. Biochem. Suppls. 30/31:286-296, 1998. © 1998 Wiley-Liss, Inc.
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  • 99
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    Journal of Cellular Biochemistry 72 (1998), S. 264-276 
    ISSN: 0730-2312
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Genes involved in chromosomal translocations, associated with the formation of fusion proteins in leukemia, are modular in nature and regulatory in function. It is likely that they are involved in the initiation and maintenance of normal hematopoiesis. A conceptual model is proposed by which disruption of these different genes leads to the development of acute leukemia. Central to this model is the functional interaction between the mammalian trithorax and polycomb group protein complexes. Many of the genes identified in leukemia-associated translocations are likely upstream regulators, co-participators or downstream targets of these complexes. In the natural state, these proteins interact with each other to form multimeric higher-order structures, which sequentially regulate the development of the normal hematopoietic state, either through HOX gene expression or other less defined pathways. The novel interaction domains acquired by the chimaeric fusion products subvert normal cellular control mechanisms, which result in both a failure of cell maturation and activation of anti-apoptotic pathways. The mechanisms by which these translocation products are able to affect these processes are thought to lie at the level of chromatin-mediated transcriptional activation and/or repression. The stimuli for proliferation and development of clinically overt disease may require subsequent mutations in more than one oncogene or tumor suppressor gene, or both. A more comprehensive catalogue of mutation events in malignant cells is therefore required to understand the key regulatory networks that serve to maintain multipotentiality and in particular the modifications which initiate and coordinate commitment in differentiating hematopoietic cells. We propose a model in which common pathways for leukemogenesis lie along the cell cycle control of chromatin structure in terms of transcriptional activation or repression. A clearer understanding of this cascade will provide opportunities for the design and construction of novel biological agents that are able to restore normal regulatory mechanisms. J. Cell. Biochem. Suppls. 30/31:264-276, 1998. © 1998 Wiley-Liss, Inc.
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  • 100
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    Journal of Cellular Biochemistry 72 (1998), S. 313-336 
    ISSN: 0730-2312
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: No abstract.
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