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  • Other Sources  (45)
  • Springer Nature
  • American Institute of Physics
  • 1
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    Muted multidecadal climate variability in central Europe during cold stadial periods (2021)
    Springer Nature
    Details
    Publication Date: 2024-02-07
    Description: During the last ice age, the Northern Hemisphere experienced a series of abrupt millennial-scale climatic changes linked to variations in the strength of the Atlantic Meridional Overturning Circulation and sea-ice extent. However, our understanding of their impacts on decadal-scale climate variability in central Europe has been limited by the lack of high-resolution continental archives. Here, we present a near annual-resolution climate proxy record of central European temperature reconstructed from the Eifel maar lakes of Holzmaar and Auel in Germany, spanning the past 60,000 years. The lake sediments reveal a series of previously undocumented multidecadal climate cycles of around 20 to 150 years that persisted through the last glacial cycle. The periodicity of these cycles suggests that they are related to the Atlantic multidecadal climate oscillations found in the instrumental record and in other climate archives during the Holocene. Our record shows that multidecadal variability in central Europe was strong during all warm interstadials, but was substantially muted during all cold stadial periods. We suggest that this decrease in multidecadal variability was the result of the atmospheric circulation changes associated with the weakening of the Atlantic Meridional Overturning Circulation and the expansion of North Atlantic sea-ice cover during the coldest parts of the last ice age.
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  • 2
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    Trans-European Suture Zone (2020)
    Springer Nature
    In:  In: Encyclopedia of Solid Earth Geophysics. , ed. by Gupta, H. Encyclopedia of Earth Sciences Series . Springer Nature, Cham, Switzerland, , 11 pp. ISBN 978-3-030-10475-7
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    Publication Date: 2021-02-10
    Description: The Trans-European Suture Zone (TESZ) is the transition zone from the Precambrian East European Craton in the north and east to the younger Phanerozoic mobile belts to the south and west. It is the most prominent lithospheric tectonic feature of Europe. The term Trans-European Suture Zone was only adapted around year 2000 during the Pan-European EUROPROBE program of the European Science Foundation. Until then, parts of the zone were termed Teisseyre-Tornquist Zone, Sorgenfrei-Tornquist Zone, Trans-European Fault, and Tornquist Fan.
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    Integration of triaxial testing and pore-scale visualization of methane hydrate bearing sediments (2019)
    American Institute of Physics
    In:  Review of Scientific Instruments, 90 (12). p. 124504.
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    Publication Date: 2021-01-08
    Description: Understanding mechanical interactions between hydrate and hosting sediments is critical for evaluating formation stability and associated environmental impacts of hydrate-bearing sediments during gas production. While core-scale studies of hydrate-bearing sediments are readily available and some explanations of observed results rely on pore-scale behavior of hydrate, actual pore-scale observations supporting the larger-scale phenomena are rarely available for hydrate-bearing sediments, especially with methane as guest molecules. The primary reasons for the scarcity include the challenge of developing tools for small-scale testing apparatus and pore-scale visualization capability. We present a testing assembly that combines pore-scale visualization and triaxial test capability of methane hydrate-bearing sediments. This testing assembly allows temperature regulation and independent control of four pressures: influent and effluent pore pressure, confining pressure, and axial pressure. Axial and lateral effective stresses can be applied independently to a 9.5 mm diameter and 19 mm long specimen while the pore pressure and temperature are controlled to maintain the stability of methane hydrate. The testing assembly also includes an X-ray transparent beryllium core holder so that 3D computed tomography scanning can be conducted during the triaxial loading. This testing assembly permits pore-scale exploration of hydrate-sediment interaction in addition to the traditional stress-strain relationship. Exemplary outcomes are presented to demonstrate applications of the testing assembly on geomechanical property estimations of methane-hydrate bearing sediments.
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    Toward one-meter resolution in 3D seismic (2018)
    American Institute of Physics
    In:  The Leading Edge, 37 (11). pp. 818-828.
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    Publication Date: 2019-01-02
    Description: High-resolution 3D (HR3D) seismic data are important for hydrocarbon exploration of shallow reservoirs, site characterization, and geohazard assessments. The goal of this contribution is to identify and quantify the parameters to increase the resolution of HR3D seismic data to meter scale. The main acquisition parameters controlling the resolution of the collected data are the spectrum of the seismic source, source-receiver offset range, and trace density. An evolution to one-meter-scale resolution of 3D seismic will rely on combining a reproducible seismic source with high frequencies up to at least 600 Hz, a high uniform trace density of more than 4 million traces per square kilometer, and an offset range shorter than approximately 200 m. The resulting 3D seismic data volume will reach meter-scale resolution for water and target depths of less than 600 m. The proposed HR3D system will be suitable for 3D and 4D characterization of seabed properties and shallow stratigraphy, the identification of geohazards and hydrocarbon leakage, and monitoring the environmental impact of offshore activities. The P-Cable 3D system is an excellent starting point for achieving one-meter-scale resolution due to its flexible and tight meter-scale shot and receiver spacing.
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    Function and functional redundancy in microbial systems (2018)
    Springer Nature
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    Publication Date: 2023-02-10
    Description: Microbial communities often exhibit incredible taxonomic diversity, raising questions regarding the mechanisms enabling species coexistence and the role of this diversity in community functioning. On the one hand, many coexisting but taxonomically distinct microorganisms can encode the same energy-yielding metabolic functions, and this functional redundancy contrasts with the expectation that species should occupy distinct metabolic niches. On the other hand, the identity of taxa encoding each function can vary substantially across space or time with little effect on the function, and this taxonomic variability is frequently thought to result from ecological drift between equivalent organisms. Here, we synthesize the powerful paradigm emerging from these two patterns, connecting the roles of function, functional redundancy and taxonomy in microbial systems. We conclude that both patterns are unlikely to be the result of ecological drift, but are inevitable emergent properties of open microbial systems resulting mainly from biotic interactions and environmental and spatial processes.
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    What genomic data can reveal about eco-evolutionary dynamics (2017)
    Springer Nature
    In:  Nature Ecology & Evolution, 2 . pp. 9-15.
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    Publication Date: 2020-06-25
    Description: Recognition that evolution operates on the same timescale as ecological processes has motivated growing interest in eco-evolutionary dynamics. Nonetheless, generating sufficient data to test predictions about eco-evolutionary dynamics has proved challenging, particularly in natural contexts. Here we argue that genomic data can be integrated into the study of eco-evolutionary dynamics in ways that deepen our understanding of the interplay between ecology and evolution. Specifically, we outline five major questions in the study of eco-evolutionary dynamics for which genomic data may provide answers. Although genomic data alone will not be sufficient to resolve these challenges, integrating genomic data can provide a more mechanistic understanding of the causes of phenotypic change, help elucidate the mechanisms driving eco-evolutionary dynamics, and lead to more accurate evolutionary predictions of eco-evolutionary dynamics in nature.
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  • 7
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    Open discussion of negative emissions is urgently needed (2017)
    Springer Nature
    In:  Nature Energy, 2 (12). pp. 902-904.
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    Publication Date: 2020-06-25
    Description: Although nearly all 2 °C scenarios use negative CO2 emission technologies, only relatively small investments are being made in them, and concerns are being raised regarding their large-scale use. If no explicit policy decisions are taken soon, however, their use will simply be forced on us to meet the Paris climate targets.
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    Interactions of microplastic debris throughout the marine ecosystem (2017)
    Springer Nature
    In:  Nature Ecology & Evolution, 1 (Article number: 0116).
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    Publication Date: 2020-06-25
    Description: Marine microscopic plastic (microplastic) debris is a modern societal issue, illustrating the challenge of balancing the convenience of plastic in daily life with the prospect of causing ecological harm by careless disposal. Here we develop the concept of microplastic as a complex, dynamic mixture of polymers and additives, to which organic material and contaminants can successively bind to form an ‘ecocorona’, increasing the density and surface charge of particles and changing their bioavailability and toxicity. Chronic exposure to microplastic is rarely lethal, but can adversely affect individual animals, reducing feeding and depleting energy stores, with knock-on effects for fecundity and growth. We explore the extent to which ecological processes could be impacted, including altered behaviours, bioturbation and impacts on carbon flux to the deep ocean. We discuss how microplastic compares with other anthropogenic pollutants in terms of ecological risk, and consider the role of science and society in tackling this global issue in the future.
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  • 9
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    Targeting autophagy in cancer (2017)
    Springer Nature
    In:  Nature Reviews Cancer, 17 (9). pp. 528-542.
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    Publication Date: 2020-06-24
    Description: Autophagy is a mechanism by which cellular material is delivered to lysosomes for degradation, leading to the basal turnover of cell components and providing energy and macromolecular precursors. Autophagy has opposing, context-dependent roles in cancer, and interventions to both stimulate and inhibit autophagy have been proposed as cancer therapies. This has led to the therapeutic targeting of autophagy in cancer to be sometimes viewed as controversial. In this Review, we suggest a way forwards for the effective targeting of autophagy by understanding the context-dependent roles of autophagy and by capitalizing on modern approaches to clinical trial design.
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    Adaptation of phytoplankton to a decade of experimental warming linked to increased photosynthesis (2017)
    Springer Nature
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    Publication Date: 2023-07-11
    Description: Phytoplankton photosynthesis is a critical flux in the carbon cycle, accounting for approximately 40% of the carbon dioxide fixed globally on an annual basis and fuelling the productivity of aquatic food webs. However, rapid evolutionary responses of phytoplankton to warming remain largely unexplored, particularly outside the laboratory, where multiple selection pressures can modify adaptation to environmental change. Here, we use a decade-long experiment in outdoor mesocosms to investigate mechanisms of adaptation to warming (+4 °C above ambient temperature) in the green alga Chlamydomonas reinhardtii, in naturally assembled communities. Isolates from warmed mesocosms had higher optimal growth temperatures than their counterparts from ambient treatments. Consequently, warm-adapted isolates were stronger competitors at elevated temperature and experienced a decline in competitive fitness in ambient conditions, indicating adaptation to local thermal regimes. Higher competitive fitness in the warmed isolates was linked to greater photosynthetic capacity and reduced susceptibility to photoinhibition. These findings suggest that adaptive responses to warming in phytoplankton could help to mitigate projected declines in aquatic net primary production by increasing rates of cellular net photosynthesis.
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    Unusual marine unicellular symbiosis with the nitrogen-fixing cyanobacterium UCYN-A (2016)
    Springer Nature
    In:  Nature Microbiology, 2 (16214).
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    Publication Date: 2020-06-24
    Description: Nitrogen fixation — the reduction of dinitrogen (N2) gas to biologically available nitrogen (N) — is an important source of N for terrestrial and aquatic ecosystems. In terrestrial environments, N2-fixing symbioses involve multicellular plants, but in the marine environment these symbioses occur with unicellular planktonic algae. An unusual symbiosis between an uncultivated unicellular cyanobacterium (UCYN-A) and a haptophyte picoplankton alga was recently discovered in oligotrophic oceans. UCYN-A has a highly reduced genome, and exchanges fixed N for fixed carbon with its host. This symbiosis bears some resemblance to symbioses found in freshwater ecosystems. UCYN-A shares many core genes with the 'spheroid bodies' of Epithemia turgida and the endosymbionts of the amoeba Paulinella chromatophora. UCYN-A is widely distributed, and has diversified into a number of sublineages that could be ecotypes. Many questions remain regarding the physical and genetic mechanisms of the association, but UCYN-A is an intriguing model for contemplating the evolution of N2-fixing organelles.
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  • 12
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    Ray-trace modeling of acoustic Green's function based on the semiclassical (eikonal) approximation (2016)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 140 (4). pp. 2695-2702.
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    Publication Date: 2020-07-16
    Description: The Green's function (GF) for the scalar wave equation is numerically constructed by an advanced geometric ray-tracing method based on the eikonal approximation related to the semiclassical propagator. The underlying theory is first briefly introduced, and then it is applied to acoustics and implemented in a ray-tracing-type numerical simulation. The so constructed numerical method is systematically used to calculate the sound field in a rectangular (cuboid) room, yielding also the acoustic modes of the room. The simulated GF is rigorously compared to its analytic approximation. Good agreement is found, which proves the devised numerical approach potentially useful also for low frequency acoustic modeling, which is in practice not covered by geometrical methods.
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    Genomic and enzymatic evidence for acetogenesis among multiple lineages of the archaeal phylum Bathyarchaeota widespread in marine sediments (2016)
    Springer Nature
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    Publication Date: 2023-12-13
    Description: Members of the archaeal phylum Bathyarchaeota are widespread and abundant in the energy-deficient marine subsurface sediments. However, their life strategies have remained largely elusive. Here, we provide genetic evidence that some lineages of Bathyarchaeota are acetogens, being capable of homoacetogenesis, a metabolism so far restricted to the domain Bacteria. Metabolic reconstruction based on genomic bins assembled from the metagenome of deep-sea subsurface sediments shows that the metabolism of some lineages of Bathyarchaeota is similar to that of bona fide bacterial homoacetogens, by having pathways for acetogenesis and for the fermentative utilization of a variety of organic substrates. Heterologous expression and activity assay of the acetate kinase gene ack from Bathyarchaeota, demonstrate further the capability of these Bathyarchaeota to grow as acetogens. The presence and expression of bathyarchaeotal genes indicative of active acetogenesis was also confirmed in Peru Margin subsurface sediments where Bathyarchaeota are abundant. The analyses reveal that this ubiquitous and abundant subsurface archaeal group has adopted a versatile life strategy to make a living under energy-limiting conditions. These findings further expand the metabolic potential of Archaea and argue for a revision of the role of Archaea in the carbon cycle of marine sediments.
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  • 14
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    Sources of variability in consonant perception of normal-hearing listeners (2015)
    American Institute of Physics
    In:  The Journal of the Acoustical Society of America, 138 (3). pp. 1253-1267.
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    Publication Date: 2020-05-11
    Description: Responses obtained in consonant perception experiments typically show a large variability across stimuli of the same phonetic identity. The present study investigated the influence of different potential sources of this response variability. It was distinguished between source-induced variability, referring to perceptual differences caused by acoustical differences in the speech tokens and/or the masking noise tokens, and receiver-related variability, referring to perceptual differences caused by within- and across-listener uncertainty. Consonant-vowel combinations consisting of 15 consonants followed by the vowel /i/ were spoken by two talkers and presented to eight normal-hearing listeners both in quiet and in white noise at six different signal-to-noise ratios. The obtained responses were analyzed with respect to the different sources of variability using a measure of the perceptual distance between responses. The speech-induced variability across and within talkers and the across-listener variability were substantial and of similar magnitude. The noise-induced variability, obtained with time-shifted realizations of the same random process, was smaller but significantly larger than the amount of within-listener variability, which represented the smallest effect. The results have implications for the design of consonant perception experiments and provide constraints for future models of consonant perception.
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  • 15
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    Quantitative genetics of immunity and life history under different photoperiods (2012)
    Springer Nature
    In:  Heredity, 108 (5). pp. 569-576.
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    Publication Date: 2020-07-29
    Description: Insects with complex life-cycles should optimize age and size at maturity during larval development. When inhabiting seasonal environments, organisms have limited reproductive periods and face fundamental decisions: individuals that reach maturity late in season have to either reproduce at a small size or increase their growth rates. Increasing growth rates is costly in insects because of higher juvenile mortality, decreased adult survival or increased susceptibility to parasitism by bacteria and viruses via compromised immune function. Environmental changes such as seasonality can also alter the quantitative genetic architecture. Here, we explore the quantitative genetics of life history and immunity traits under two experimentally induced seasonal environments in the cricket Gryllus bimaculatus. Seasonality affected the life history but not the immune phenotypes. Individuals under decreasing day length developed slower and grew to a bigger size. We found ample additive genetic variance and heritability for components of immunity (haemocyte densities, proPhenoloxidase activity, resistance against Serratia marcescens), and for the life history traits, age and size at maturity. Despite genetic covariance among traits, the structure of G was inconsistent with genetically based trade-off between life history and immune traits (for example, a strong positive genetic correlation between growth rate and haemocyte density was estimated). However, conditional evolvabilities support the idea that genetic covariance structure limits the capacity of individual traits to evolve independently. We found no evidence for G × E interactions arising from the experimentally induced seasonality.
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  • 16
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    Noninvasive cell-tracking methods (2011)
    Springer Nature
    In:  Nature Reviews Clinical Oncology, 8 (11). pp. 677-688.
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    Publication Date: 2020-06-24
    Description: Cell-based therapies, such as adoptive immunotherapy and stem-cell therapy, have received considerable attention as novel therapeutics in oncological research and clinical practice. The development of effective therapeutic strategies using tumor-targeted cells requires the ability to determine in vivo the location, distribution, and long-term viability of the therapeutic cell populations as well as their biological fate with respect to cell activation and differentiation. In conjunction with various noninvasive imaging modalities, cell-labeling methods, such as exogenous labeling or transfection with a reporter gene, allow visualization of labeled cells in vivo in real time, as well as monitoring and quantifying cell accumulation and function. Such cell-tracking methods also have an important role in basic cancer research, where they serve to elucidate novel biological mechanisms. In this Review, we describe the basic principles of cell-tracking methods, explain various approaches to cell tracking, and highlight recent examples for the application of such methods in animals and humans.
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    Ongoing climate change following a complete cessation of carbon dioxide emissions (2011)
    Springer Nature
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    Publication Date: 2022-10-06
    Description: A threat of irreversible damage should prompt action to mitigate climate change, according to the United Nations Framework Convention on Climate Change, which serves as a basis for international climate policy. CO2-induced climate change is known to be largely irreversible on timescales of many centuries1, as simulated global mean temperature remains approximately constant for such periods following a complete cessation of carbon dioxide emissions while thermosteric sea level continues to rise1,2,3,4,5,6. Here we use simulations with the Canadian Earth System Model to show that ongoing regional changes in temperature and precipitation are significant, following a complete cessation of carbon dioxide emissions in 2100, despite almost constant global mean temperatures. Moreover, our projections show warming at intermediate depths in the Southern Ocean that is many times larger by the year 3000 than that realized in 2100. We suggest that a warming of the intermediate-depth ocean around Antarctica at the scale simulated for the year 3000 could lead to the collapse of the West Antarctic Ice Sheet, which would be associated with a rise in sea level of several metres2,7,8.
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    Surrogate-based Optimization of Biogeochemical Transport Models (2010)
    American Institute of Physics
    In:  [Paper] In: 8. International Conference of Numerical Analysis and Applied Mathematics (ICNAAM 2010), 19.-25.09.2010, Rhodes, Greece ; pp. 612-616 .
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    Publication Date: 2020-08-03
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    The rock physics basis for 4D seismic monitoring of CO2 fate: Are we there yet? (2010)
    American Institute of Physics
    In:  The Leading Edge, 29 (2). pp. 156-162.
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    Publication Date: 2019-06-17
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  • 20
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    Primitive soft-bodied cephalopods from the Cambrian (2010)
    Springer Nature
    In:  Nature, 465 (7297). pp. 469-472.
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    Publication Date: 2021-08-26
    Description: The exquisite preservation of soft-bodied animals in Burgess Shale-type deposits provides important clues into the early evolution of body plans that emerged during the Cambrian explosion1. Until now, such deposits have remained silent regarding the early evolution of extant molluscan lineages—in particular the cephalopods. Nautiloids, traditionally considered basal within the cephalopods, are generally depicted as evolving from a creeping Cambrian ancestor whose dorsal shell afforded protection and buoyancy2. Although nautiloid-like shells occur from the Late Cambrian onwards, the fossil record provides little constraint on this model, or indeed on the early evolution of cephalopods. Here, we reinterpret the problematic Middle Cambrian animal Nectocaris pteryx3,4 as a primitive (that is, stem-group), non-mineralized cephalopod, based on new material from the Burgess Shale. Together with Nectocaris, the problematic Lower Cambrian taxa Petalilium5 and (probably) Vetustovermis6,7 form a distinctive clade, Nectocarididae, characterized by an open axial cavity with paired gills, wide lateral fins, a single pair of long, prehensile tentacles, a pair of non-faceted eyes on short stalks, and a large, flexible anterior funnel. This clade extends the cephalopods’ fossil record2 by over 30 million years, and indicates that primitive cephalopods lacked a mineralized shell, were hyperbenthic, and were presumably carnivorous. The presence of a funnel suggests that jet propulsion evolved in cephalopods before the acquisition of a shell. The explosive diversification of mineralized cephalopods in the Ordovician may have an understated Cambrian ‘fuse’.
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    Geo- and hydro-acoustic manifestations of shallow gas and gas seeps in the Dnepr paleodelta, northwestern Black Sea (2009)
    American Institute of Physics
    In:  The Leading Edge, 28 (9). pp. 1030-1040.
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    Publication Date: 2016-05-24
    Description: Shallow gas occurs between 0 and 1000 m below the sea floor. It consists mainly of microbial-formed or thermogenic methane or a combination of both, sometimes with a limited admixture of higher hydrocarbons (propane, butane, etc.).
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    Noise reduction in 2D and 3D seismic imaging by the CRS method (2008)
    American Institute of Physics
    In:  The Leading Edge, 27 (2). pp. 258-265.
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    Publication Date: 2015-12-16
    Description: The definition of noise and signal in seismic data will vary widely with the viewer's perspective and methods to process and visualize the data. Thus we begin with our definition from the perspective of presenting structural subsurface information.
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    A new equation for the accurate calculation of sound speed in all oceans (2008)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 124 (5). pp. 2774-2782.
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    Publication Date: 2020-07-16
    Description: A new equation is proposed for the calculation of sound speed in seawater as a function of temperature, salinity, depth, and latitude in all oceans and open seas, including the Baltic and the Black Sea. The proposed equation agrees to better than ±0.2m∕s with two reference complex equations, each fitting the best available data corresponding to existing waters of different salinities. The only exceptions are isolated hot brine spots that may be found at the bottom of some seas. The equation is of polynomial form, with 14 terms and coefficients of between one and three significant figures. This is a substantial reduction in complexity compared to the more complex equations using pressure that need to be calculated according to depth and location. The equation uses the 1990 universal temperature scale (an elementary transformation is given for data based on the 1968 temperature scale). It is hoped that the equation will be useful to those who need to calculate sound speed in applications of marine acoustics.
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    Fracture properties from seismic scattering (2007)
    American Institute of Physics
    In:  The Leading Edge, 26 (9). pp. 1186-1196.
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    Publication Date: 2019-04-29
    Description: The seismic trace is a complex aggregate of reflected and scattered signals from subsurface formation interfaces and heterogeneities. Although many varieties of random noise may also be present in the trace, we know from reacquiring the same seismic survey that seismic data are highly repeatable, indicating that significant information about the subsurface is contained in the trace but not yet used by our standard analysis methods. Seismic scattering is a type of signal contained in the data that is generally not utilized.
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    Seismic characterization and continuity analysis of gas-hydrate horizons near Mallik research wells, Mackenzie Delta, Canada (2006)
    American Institute of Physics
    In:  The Leading Edge, 25 (5). pp. 599-604.
    Details
    Publication Date: 2015-11-25
    Description: Gas-hydrate accumulations located onshore in Arctic permafrost regions are seen as a potential source of natural gas. Surprisingly, most of the gas hydrate found in the Mackenzie Delta and Beaufort Sea areas was indirectly discovered or inferred from conventional hydrocarbon exploration programs. One of these occurrences, the Mallik gas-hydrate field (Figure 1), has received particular attention over the last 10 years. Two internationally partnered research well programs have intersected three intervals of gas hydrates and have allowed successful extraction of subpermafrost core samples with significant gas hydrates. The gas-hydrate intervals are up to 40 m thick and have high gas-hydrate saturation, sometimes exceeding 80% of pore volume of unconsolidated clastic sediments with average porosities from 25–40%. At Mallik, the gas-hydrate intervals are located at depths of 900–1100 m and are localized on the crest of an anticline.
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    Seafloor reflectivity—An important seismic property for interpreting fluid/gas expulsion geology and the presence of gas hydrate (2006)
    American Institute of Physics
    In:  The Leading Edge, 25 (5). pp. 620-628.
    Details
    Publication Date: 2020-01-20
    Description: A bottom-simulating reflection (BSR) is a seismic reflectivity phenomenon that is widely accepted as indicating the base of the gas-hydrate stability zone. The acoustic impedance difference between sediments invaded with gas hydrate above the BSR and sediments without gas hydrate, but commonly with free gas below, are accepted as the conditions that create this reflection. The relationship between BSRs and marine gas hydrate has become so well known since the 1970s that investigators, when asked to define the most important seismic attribute of marine gas-hydrate systems, usually reply, “a BSR event.” Research conducted over the last decade has focused on calibrating seafloor seismic reflectivity across the geology of the northern Gulf of Mexico (GoM) continental slope surface to the seafloor. This research indicates that the presence and character of seafloor bright spots (SBS) can be indicators of gas hydrates in surface and near-surface sediments (Figure 1). It has become apparent that SBSs on the continental slope generally are responses to fluid and gas expulsion processes. Gas-hydrate formation is, in turn, related to these processes. As gas-hydrate research expands around the world, it will be interesting to find if SBS behavior in other deepwater settings is as useful for identifying gas-hydrate sites as in the GoM.
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  • 27
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    ‘Lophenteropneust’ hypothesis refuted by collection and photos of new deep-sea hemichordates (2005)
    Springer Nature
    In:  Nature, 434 (7031). pp. 374-376.
    Details
    Publication Date: 2021-09-07
    Description: The deep ocean is home to a group of broad-collared hemichordates—the so-called ‘lophenteropneusts’—that have been photographed gliding on the sea floor1,2,3,4,5,6,7,8 but have not previously been collected. It has been claimed that these worms have collar tentacles and blend morphological features of the two main hemichordate body plans, namely the tentacle-less enteropneusts and the tentacle-bearing pterobranchs. Consequently, lophenteropneusts have been invoked as missing links to suggest that the former evolved into the latter5. The most significant aspect of the lophenteropneust hypothesis is its prediction that the fundamental body plan within a basal phylum of deuterostomes was enteropneust-like. The assumption of such an ancestral state influences ideas about the evolution of the vertebrates from the invertebrates9,10,11,12,13,14. Here we report on the first collected specimen of a broad-collared, deep-sea enteropneust and describe it as a new family, genus and species. The collar, although disproportionately broad, lacks tentacles. In addition, we find no evidence of tentacles in the available deep-sea photographs (published and unpublished) of broad-collared enteropneusts, including those formerly designated as lophenteropneusts. Thus, the lophenteropneust hypothesis was based on misinterpretation of deep-sea photographs of low quality and should no longer be used to support the idea that the enteropneust body plan is basal within the phylum Hemichordata.
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  • 28
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    Cephalopod Hox genes and the origin of morphological novelties (2003)
    Springer Nature
    In:  Nature, 424 (6952). pp. 1061-1065.
    Details
    Publication Date: 2021-07-14
    Description: Cephalopods are a diverse group of highly derived molluscs, including nautiluses, squids, octopuses and cuttlefish. Evolution of the cephalopod body plan from a monoplacophoran-like ancestor1 entailed the origin of several key morphological innovations contributing to their impressive evolutionary success2. Recruitment of regulatory genes3, or even pre-existing regulatory networks4, may be a common genetic mechanism for generating new structures. Hox genes encode a family of transcriptional regulatory proteins with a highly conserved role in axial patterning in bilaterians5; however, examples highlighting the importance of Hox gene recruitment for new developmental functions are also known6,7. Here we examined developmental expression patterns for eight out of nine Hox genes8 in the Hawaiian bobtail squid Euprymna scolopes, by whole-mount in situ hybridization. Our data show that Hox orthologues have been recruited multiple times and in many ways in the origin of new cephalopod structures. The manner in which these genes have been co-opted during cephalopod evolution provides insight to the nature of the molecular mechanisms driving morphological change in the Lophotrochozoa, a clade exhibiting the greatest diversity of body plans in the Metazoa.
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  • 29
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    Seismic detection of marine methane hydrate (2002)
    American Institute of Physics
    In:  The Leading Edge, 21 (7). pp. 686-689.
    Details
    Publication Date: 2016-07-13
    Description: As offshore petroleum exploration and development move into deeper water, industry must contend increasingly with gas hydrate, a solid compound that binds water and a low-molecular-weight gas (usually methane). Gas hydrate has been long studied in industry from an engineering viewpoint, due to its tendency to clog gas pipelines. However, hydrate also occurs naturally wherever there are high pressures, low temperatures, and sufficient concentrations of gas and water. These conditions prevail in two natural environments, both of which are sites of active exploration: permafrost regions and marine sediments on continental slopes. In this article we discuss seismic detection of gas hydrate in marine sediments. Gas hydrate in deepwater sediments poses both new opportunities and new hazards. An enormous quantity of natural gas, likely far exceeding the global inventory of conventional fossil fuels, is locked up worldwide in hydrates. Ex-traction of this unconventional resource presents unique exploration, engineering, and economic challenges, and several countries, including the United States, Japan, Canada, India, and Korea, have initiated joint industry-academic-governmental programs to begin studying those challenges. Hydrates also constitute a potential drilling hazard. Because hydrates are only stable in a restricted range of pressure and temperature, any activity that sufficiently raises temperature or lowers pressure could destabilize them, releasing potentially large volumes of gas and decreasing the shear strength of the host sediments. Assessment of the opportunities and hazards associated with hydrates requires reliable methods of detecting hydrate and accurate maps of their distribution and concentration. Hydrate may occur only within the upper few hundred meters of deepwater sediment, at any depth between the seafloor and the base of the stability zone, which is controlled by local pressure and temperature. Hydrate is occasionally exposed at the seafloor, where it can be detected either visually or acoustically by strong seismic reflection amplitudes or high backscatter …
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  • 30
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    Dependence of multiple-attenuation techniques on the geological setting: A case study from offshore Taiwan (1999)
    American Institute of Physics
    In:  The Leading Edge, 18 (1). pp. 74-80.
    Details
    Publication Date: 2018-01-18
    Type: Article , NonPeerReviewed
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  • 31
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    Depth-pressure relationships in the oceans and seas (1998)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 103 (3). pp. 1346-1352.
    Details
    Publication Date: 2020-07-16
    Description: Two sets of equations, covering all world oceans and seas, are presented to calculate pressure from depth for the computation of sound speed, and depth from pressure for use in ocean engineering. They are based on the algorithm of UNESCO 1983 [N. P. Fofonoff and R. C. Millard, Jr., Unesco Tech. Papers in Mar. Sci. No. 44 (1983)], and on calculations from temperature and salinity profiles. The pressure to depth conversion is presented first. The equations can be used in those cases where the desired accuracy is reduced to ±0.8 m. The equations to convert depth to pressure provide an overall accuracy between ±8000 Pa and ±1000 Pa. This leads to errors in sound speed consistently smaller than ±0.02 m/s. The discussion, and comparisons with results and other formulas, suggest that the new equations are a substantial improvement on the previous simplified ones, which should now be abandoned.
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  • 32
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    Seismic attributes and their classification (1996)
    American Institute of Physics
    In:  The Leading Edge, 15 (10). p. 1090.
    Details
    Publication Date: 2016-08-30
    Description: Attributes have proliferated recently with different selections available on different workstations. What do they all mean? When do we use one and when another? The answers to these questions are not easy but the first step is to understand what our options are, and herein lies the purpose of this article.
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  • 33
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    Colour-blind camouflage (1996)
    Springer Nature
    In:  Nature, 382 (6590). pp. 408-409.
    Details
    Publication Date: 2021-09-02
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  • 34
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    3-D seismic discontinuity for faults and stratigraphic features: The coherence cube (1995)
    American Institute of Physics
    In:  The Leading Edge, 14 (10). pp. 1053-1058.
    Details
    Publication Date: 2016-07-26
    Description: Seismic data are usually acquired and processed for imaging reflections. This paper describes a method of processing seismic data for imaging discontinuities (e.g., faults and stratigraphic features). One application of this nontraditional process is a 3-D volume, or cube, of coherence coefficients within which faults are revealed as numerically separated surfaces. Figure 1 compares a traditional 3-D reflection amplitude time slice with the results of the new method. To our knowledge, this is the first published method of revealing fault surfaces within a 3-D volume for which no fault reflections have been recorded.
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  • 35
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    High‐frequency bottom backscattering: Roughness versus sediment volume scattering (1992)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 92 (2). pp. 962-977.
    Details
    Publication Date: 2020-07-16
    Description: High‐frequency bottom acoustic and geoacoustic data from three well‐characterized sites of different bottom composition are compared with scattering models in order to clarify the roles played by interface roughness and sediment volume inhomogeneities. Model fits to backscattering data from two silty sites lead to the conclusion that scattering from volume inhomogeneities was primarily responsible for the observed backscattering. In contrast, measured bottom roughness was sufficient to explain the backscattering seen at a sandy site. Although the sandy site had directional ripples, the model and data agree in their lack of anisotropy.
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  • 36
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    Foraging behaviour of emperor penguins as a resource detector in winter and summer (1992)
    Springer Nature
    In:  Nature, 360 (6402). pp. 336-339.
    Details
    Publication Date: 2021-04-22
    Description: The emperor penguin (Aptenodytes forsteri), which feeds only at sea, is restricted to the higher latitudes of the antarctic sea-ice habitat1–3. It breeds on the winter fast ice when temperatures are−30 °C and high winds are frequent3. Assuming entirely the task of incubating the single egg, the male fasts for about 120 days in the most severe conditions. When it is relieved by the female around hatching time, the distance between the colony and the open sea may be 100km or more4,5, but where emperors go to forage at that time or during the summer is unknown. The polynias are areas of open water in sea-ice and during winter, with the under-ice habitats at any time of the year, they are among the most difficult of all Antarctic areas to sample. Here we monitor by satellite the routes taken by emperor penguins for foraging and compare them with satellite images of sea-ice. Winter birds walking over fast ice travelled up to 296 km to feed in polynias, whereas those swimming in light pack-ice travelled as far as 895km from the breeding colony. One record of diving showed that although most dives are to mid-water depths, some are near the bottom. Obtaining such detailed information on foraging in emperor penguins means that this bird now offers a unique opportunity to investigate the Antarctic sea-ice habitat.
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  • 37
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    Classification of heterogeneous seafloor topography through surface slope distributions (1991)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 90 (4, Pt. 2). pp. 2255-2256.
    Details
    Publication Date: 2020-07-16
    Description: Seafloor topography is neither spatially homogeneous, nor does it obey Gaussian statistics; deviations from both of these assumptions are important from a geological and acoustic point of view. It has been found that the distribution of topographic slopes can be used as a primary tool for understanding the sources and extent of spatial heterogeneities and patterns on the seafloor. The covariance function has been widely used to characterize seafloor topography, but requires the assumption of Gaussian joint probability statistics to be valid. For heterogeneous topography characterized by large transient signals such as steep scarps and volcanoes, the covariance becomes dominated by the transients; in contrast the family slope distributions can still be used to derive stable descriptors for regions with large transient signals, as well as regions containing asymmetric features, and regions with only limited sampling. Knowledge of slopes is useful because a direct relation exists between the covariance and the slope distributions at different spatial scales. Studies of the slope distribution provide a means of identifying the presence of the non‐Gaussian elements in the topography, and flagging their spatial locations. The methods used here are demonstrated by applying them to three small patches of topography located within 20 km of each other in the Eastern Pacific. It is found that dominant azimuthal directions and dip angles differ widely between the patches. In addition, asymmetries in the cross‐sectional shapes of faulted abyssal hills are documented. [Work supported by ONR.]
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    Measurements of the acoustic backscatter of manganese nodules (1985)
    American Institute of Physics
    In:  The Journal of the Acoustical Society of America, 78 (6). pp. 2115-2121.
    Details
    Publication Date: 2020-05-11
    Description: The acoustic backscatter of eight well‐curated ferromanganese nodules has been measured in 1 °C seawater at frequencies from 45 to 167 kHz. The nodules have diameters from 37 to 121 mm and are thought to be representative of the Cu–Ni–Co‐rich nodules from the area around 14° 40’ N, 125° 25’ W (DOMES site C). They had been collected in box cores on the Echo 1 expedition and were kept refrigerated and water soaked in air‐tight plastic bags. Acoustic backscatter variations of over 10 dB were observed while the nodule was rotated 10° to 30° about one of its principal axes. The complicated fine structure, as well as the target strength, makes it clear that nodules cannot be modeled as simple spheres.
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  • 39
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    Sound velocity as a function of depth in marine sediments (1985)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 78 (4). pp. 1348-1355.
    Details
    Publication Date: 2020-07-16
    Description: Additional data from sonobuoys and the Deep Sea Drilling Project (DSDP) justify separating sound‐velocity‐depth functions and velocity gradients (in the first layer of soft marine sediments) into some geographic areas and sediment types. Based on sonobuoy and core measurements (where V is sound velocity in km/s, and h is depth in sediments in km), the following data are obtained: continental shelf basins off Sumatra and Java—V=1.484+0.710h−0.085h2; U. S. Atlantic continental rise—V=1.513+0.828h−0.138h2; deep‐sea terrigenous sediments—V=1.519+1.227h−0.473h2; and siliceous sediments of the Bering Sea— V=1.509+0.869h−0.267h2. Selected DSDP data (through leg 74) in similar areas yield: continental terrace silt–clays—V=1.505+0.712h; deep‐sea terrigenous sediments—V=1.510+1.019h; and deep‐sea siliceous sediments—V=1.533+0.761h. Computed velocity gradients from sonobuoy measurements are generally supported by the DSDP gradients. Only DSDP data give the following: hemipelagic sediments—V=1.501+1.151h; deep‐sea calcareous sediments—V=1.541+0.928h; and deep‐sea pelagic clay—V=1.526+1.046h. Where fast sediment accumulation occurs, there has not been enough time to reduce sediment pore spaces under overburden pressure; areas of slow accumulation may have relatively high sediment structural strength. Both cases have lower velocity gradients because higher porosities and consequent lower velocities persist to deeper depths.
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  • 40
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    Optimum frequencies for noise‐limited active sonar detection (1981)
    American Institute of Physics
    In:  The Journal of the Acoustical Society of America, 70 (5). pp. 1336-1338.
    Details
    Publication Date: 2020-05-11
    Description: The curves of optimum frequencies versus maximum range for active sonar detection under specific sets of assumptions are presented for the more recent expressions for attenuation given by Lovett [J. Acoust. Soc. Am. 58, 620–625 (1975)] for the eastern North Pacific and Thorp [J. Acoust. Soc. Am. 42, 270 (1967)] for the western North Atlantic as corrected at low frequencies by Kibblewhite et al. [J. Acoust. Soc. Am. 60, 1040–1047 (1976)].
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  • 41
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    Vp/Vs and Poisson’s ratios in marine sediments and rocks (1979)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 66 (4). pp. 1093-1101.
    Details
    Publication Date: 2020-07-16
    Description: The ratio of compressional wavevelocityV p to shear wavevelocityV s , and Poisson’s ratio in marine sediments and rocks are important in modeling the sea floor for underwater acoustics,geophysics, and foundation engineering. V p and V s versus depth information was linked at common depths in terrigenous sediments (to 1000 m) and in sands (to 20 m) to yield data on V p vs V s , and V p /V s and Poisson’s ratios versus depth. Soft, terrigenous sediments usually grade with depth into mudstones and shales; V p /V s ratios vary from about 13 or more at the sea floor to about 2.6 at 1000 m. Poisson’s ratios vary from above 0.49 at the sea floor to about 0.41 at 1000 m. In sands, V p , V s , and V p /V s have very high gradients in the first few meters; below about 5 m, V p /V s ratios decrease from about 9 to about 6 at 20 m; Poisson’s ratios vary from above 0.49 at the surface to above 0.48 at 20 m. The mean value of V p /V s in 30 laboratory samples of chalk and limestone is 1.90 (standard error: 0.03); mean Poisson’s ratio is 0.31. Literature data on basalts from the sea floor are reviewed. Equations relating V p to V s are given for terrigenous sediments, sands, and basalts.
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  • 42
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    Sound velocity-density relations in sea-floor sediments and rocks (1978)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 63 (2). pp. 366-377.
    Details
    Publication Date: 2020-07-16
    Description: In studies in underwater acoustics,geophysics, and geology, the relations between soundvelocity and density allow assignment of approximate values of density to sediment and rock layers of the earth’s crust and mantle, given a seismicmeasurement of velocity. In the past, single curves of velocity versus density represented all sediment and rock types. A large amount of recent data from the Deep Sea Drilling Project (DSDP), and reflection and refraction measurements of soundvelocity, allow construction of separate velocity–density curves for the principal marine sediment and rock types. The paper uses carefully selected data from laboratory and i n s i t umeasurements to present empirical sound velocity–density relations (in the form of regression curves and equations) in terrigenous silt clays, turbidites, and shale, in calcareous materials (sediments, chalk, and limestone), and in siliceous materials (sediments, porcelanite, and chert); a published curve for DSDP basalts is included. Speculative curves are presented for composite sections of basalt and sediments. These velocity–density relations, with seismicmeasurements of velocity, should be useful in assigning approximate densities to sea‐floor sediment and rock layers for studies in marine geophysics, and in forming geoacoustic models of the sea floor for underwater acoustic studies.
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  • 43
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    Speed of sound in water: A simple equation for realistic parameters (1975)
    American Institute of Physics
    In:  The Journal of the Acoustical Society of America, 58 (6). pp. 1318-1319.
    Details
    Publication Date: 2020-05-11
    Description: A simple equation is presented for the dependence of sound speed on temperature, salinity, and depth of water. The comparison with Del Grosso’s NRL II shows discrepancies of the order of tenths of m/sec for realistic values of the parameters.
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  • 44
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    New equation for the speed of sound in natural waters (with comparisons to other equations) (1974)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 56 (4). p. 1084.
    Details
    Publication Date: 2020-07-16
    Description: A new equation for the speed of sound in sea water has been developed with validity not only for realistic combinations of the parameters salinity, temperature, and pressure, but with extension to pure water as well. This new equation, referred to as NRL II, has a standard deviation of 0.05 m/sec. Tables are presented comparing calculations using this new model to each of eight earlier equations. Graphs are also included indicating approximate corrections that could be applied to existing sound speed profiles, but it is recommended that such profiles be recalculated and new ones obtained according to NRL II.
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  • 45
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    Speed of sound in sea water as a function of temperature, pressure, and salinity (1960)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 32 (6). pp. 641-644.
    Details
    Publication Date: 2020-07-16
    Description: Tables for the speed of sound in sea water are presented. These tables have been prepared from an empirical formula which was derived to fit measured sound‐speed data obtained over the temperature range −3°C to 30°C, the pressure range 1.033 kg/cm2 to 1000 kg/cm2, and the salinity range 33‰ to 37‰. The discrepancy of −3.0 m/sec found by Del Grosso at 1 atm., as compared to the tables of Kuwahara, is substantiated. In addition, the pressure coefficient of sound speed observed in the present work differs from that predicted by Kuwahara.
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