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  • General Chemistry  (2,260)
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  • 1995-1999  (3,493)
  • 1945-1949  (327)
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  • 1995-1999  (3,493)
  • 1945-1949  (327)
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  • 1
    Electronic Resource
    Electronic Resource
    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 10 (1997), S. 687-696 
    ISSN: 0894-3230
    Keywords: bsorption ; fluorescence ; solvatochromism ; hydrogen bonding ; dipole moment ; naphthalenones ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Electronic absorption and steady-state fluorescence emission of seven 3,4-dihydro-1-(2-p-substituted benzylidene)naphthalenones (1-7) show sizable solvent dependence. The charge-transfer (CT) absorption maxima of these compounds in various solvents show a red shift for the electron-donating substituted compounds (1-5), whereas a blue shift is observed for compounds possessing electron-withdrawing substituents (6, 7). Excitation into the lowest energy absorption gives emission from the locally excited state, which relaxes to the emitting intramolecular charge-transfer state for compounds with strong electron-donating substituents (1-3) in hydroxylic solvents. However, in moderately polar solvents, dual emissions are observed for these compounds. No CT emission is observed for the compounds with moderate electron-donating substituents (3 and 4) or those with electron-withdrawing substituents (6 and 7). Compound 1 with an -N(CH3)2 substituent shows an excited-state dipole moment of 17 D. © 1997 John Wiley & Sons, Ltd.
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  • 2
    Electronic Resource
    Electronic Resource
    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 10 (1997), S. 717-724 
    ISSN: 0894-3230
    Keywords: SN1 solvolysis ; carbocation ; Grunwald-Winstein relationship ; solvent effect ; solvation ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The rates of solvolysis in various solvents at 25 °C were determined for five tertiary alkyl chlorides: 2-chloro-2,4,4-trimethylpentane (4), 2-chloro-2,4-dimethylpentane, 2-chloro-2-methylpentane, 1-chloro-1,3,3-trimethylcyclopentane (7) and 1-chloro-1-methylcyclopentane. The rate data were analysed on the basis of the original and extended Grunwald-Winstein-type equation [log(k/k0)=mYCl+c and log(k/k0)=lNT+mYCl+c] and the results were compared with those reported for 2-chloro-2-methylpropane (1) and 2-chloro-2,3,3-trimethylbutane (3). The rate data for 4 in 18 solvents give an excellent correlation with l=0·00±0·02 and m=0·74±0·01. The neopentyl group in 4 more effectively shields the rear-side of the reaction center than the tert-butyl group in 3 that is correlated by l=0·10±0·04 and m=0·81±0·04. The rate ratio between 4 and 1 at 25 °C is 275 in TFE and predicted to increase to 950 in TFA. The previous 4/1 rate ratio of 21 in 80% ethanol evidently underestimates the B-strain effect on the solvolysis rate of 4 by a factor of at least 40. The remote methyl groups in 7 works to increase rear-side shielding without increasing B-strain. The marked difference in the effect of the remote methyl groups between 4 and 7 suggests that the leaving chloride ion in 4 takes a locus that is nearly antiperiplanar to the tert-butyl group. © 1997 John Wiley & Sons, Ltd.
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  • 3
    Electronic Resource
    Electronic Resource
    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 10 (1997), S. 725-730 
    ISSN: 0894-3230
    Keywords: p-nitrophenyl N-phenylcarbamates ; stepwise mechanism ; rate-limiting breakdown of T± ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Kinetic studies of the reactions of p-nitrophenyl N-phenylcarbamates with benzylamines were carried out in acetonitrile at 25·0 °C. Second-order (k2) and third-order (k3) rate constants were observed for all the Y-substituted carbamates except for Y=m-Cl. The relatively large magnitude of ρX (for X-substituted benzylamines) and ρY together with a positive cross-interaction constant ρXY supports a stepwise mechanism involving rate-limiting breakdown of the zwitterionic tetrahedral intermediate T±. Kinetic isotope effect studies with deuterated benzylamine (XC6H4CH2ND2) indicate that in the base-catalyzed path, k3, rate-limiting deprotonation occurs at the amino group of benzylamine within the T± intermediate. The low δH≠ and δS≠ values for the k3 process are in accord with the proposed mechanism © 1997 John Wiley & Sons, Ltd.
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  • 4
    ISSN: 0894-3230
    Keywords: ureido sugars ; amino acids ; 1H NMR ; IR ; H-D exchange ; intramolecular hydrogen bonding ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Ureido 2-deoxy-β-D-glucopyranosides with seven different amino acid ester residues were studied by means of IR and 1H NMR spectroscopy. The H-D exchange rates increase in the order L-Val〈L-Leu〈L-Ala〈Gly for both NH protons; however, the exchange rate at N-1-H (linked to the glucopyranoside) is significantly faster than that at N-3-H (at the amino acid residue). The analysis of IR spectra in the region of the NH stretching vibrations shows, in agreement with other investigations, that the signals at 3454, 3423 and 3355 cm-1 are due to the free and the intramolecular associated NH groups forming a five- and seven-membered ring, respectively. It was found that the C7 associated ring is formed by hydrogen bonding between the N-1-H function and the C=O of the acetyl group at the C-3 position in the glucopyranoside. The N-3-H group is involved in a hydrogen bond with the C=O; function of the ester group protecting the amino acid residue. Furthermore, it was found that the ureido sugar with L-Val exhibits a stronger C7 hydrogen bond than the other amino acid residues. This result conforms with the lowest H-D exchange rate at the N-1 position of this compound. Steric effects resulting in the shielding of this hydrogen bond against OD attack are considered as a reason for this peculiarity. © 1997 John Wiley & Sons, Ltd.
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  • 5
    ISSN: 0894-3230
    Keywords: solvent effects ; aromatic nucleophilic substitutions ; empirical polarity parameter ; halonitrobenzenes ; aliphaticamines ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Empirical solvent polarity parameters ET(30) were determined by UV/VIS spectroscopy, using Dimroth-Reichardt's betaine dye, as a function of composition, for several binary solvent mixtures [i.e. polar hydrogen bond acceptor (PHBA) solvents+chloroform or dichloromethane]. Each solvent system was analyzed according to its deviations from additivity due to preferential solvation of the chemical probe and also from complicated intermolecular interactions of the mixed solvents. The ET(30) parameter of many of these mixtures has presented synergism. The synergetic effects were more significant for those binary solvent systems in which chloroform is the co-solvent. These results were related to the solvent effects on some aromatic nucleophilic substitution reactions. The kinetics of the reactions between 1-halo-2,4-dinitrobenzenes and primary or secondary aliphatic amines were studied in three solvent systems (PHBA+chloroform) where the synergism for the ET(30) polarity parameter is the rule. In all the aminodehalogenation reactions discussed the formation of the intermediate is the rate-determining step. The kinetic data show a tendency to decrease with decrease in the overall solvation capability of the binary mixture. In general, the reaction rates presented a gradual decrease in the PHBA solvent-rich zone and a large decrease at high co-solvent concentrations. The ET(30) values corresponding to binary dipolar hydrogen bond acceptor-hydrogen bond donor mixtures may be not generally valid for interpreting solvation effects on the reactions under consideration. © 1997 John Wiley & Sons, Ltd.
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  • 6
    Electronic Resource
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    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 10 (1997), S. 835-840 
    ISSN: 0894-3230
    Keywords: N-methylaminopyridines ; polar properties ; spectroscopic properties ; solvent effect ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Dipole moments of 2-N-methylamino-5-nitro-6-methylpyridine (I) and 2-N-methylamino-3-nitro-6-methylpyridine (II) were determined in solvents of different polarity and basicity. The solvent effect is discussed in terms of the two-parameter (π*-β) Kamlet-Taft expression. The solvent dependences of the energy of intramolecular charge-transfer transition and the frequency of the ν(NH) stretching vibration are in keeping with the dielectric results. It was found that the solvent-induced disturbance in the electronic structure of I is brought about by hydrogen bond interaction with the NH group. The strong intramolecular hydrogen bond in II is stable in weakly basic solvents and the electronic structure is insensitive to the environment. However, in more basic solvents the intramolecular hydrogen bond is partly broken and an N - H· · ·solvent hydrogen bond is formed, bringing about distinct changes in polarity and spectroscopic properties. © 1997 John Wiley & Sons, Ltd.
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  • 7
    ISSN: 0894-3230
    Keywords: thiapyrylium salt ; photoinduced electron transfer ; laser flash photolysis ; trans-stilbene cation radical ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Photoinduced electron transfer reactions of trans-stilbene sensitized by 2,4,6-triphenylthiapyrylium tetrafluoroborate (STPP) were carried out by steady-state and laser flash photolysis techniques in the presence and absence of oxygen in dichloromethane. Rapid dimerization of the trans-stilbene cation radical with its neutral species was observed, as previously observed in 2,4,6-triphenylpyrylium tetrafluoroborate (TPP)-sensitized reactions in dichloromethane. Electrochemical and photophysical properties such as fluorescence quantum yield and T-T absorption spectrum of STPP were also studied, and the results were compared with those for TPP. The properties of STPP as an electron transfer sensitizer are discussed. © 1997 John Wiley & Sons, Ltd.
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  • 8
    ISSN: 0894-3230
    Keywords: merocyanines ; solvatochromism ; solvent polarity ; VBHB model ; SA-SAB-SB model ; binary solvent mixtures ; solvation equilibria ; spectra simulation ; pyridinium betaines ; 7H-indolo[1,2-a]quinolinium betaines ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---A quantitative model of solvatochromism in a binary solvent system is presented. Although it is derived for merocyanine and betaine dyes, it explains a majority of known examples of solvatochromism in binary solvents. The model provides an estimation of equilibrium constants between particular types of solvates present therein. UV-VIS absorption spectra of solvated species can be simulated. They perfectly fit the experimental data. The model proposed describes the internal solvent picture from the solute point of view, which differs from other known models and may be useful for studying the structure of liquids © 1997 John Wiley & Sons, Ltd.
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  • 9
    ISSN: 0894-3230
    Keywords: complex stabilities ; alkali metals ; alkaline earth metals ; dibenzo crown ethers ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---An experimental method was developed to determine the stability constants with nearly insoluble ligands in homogeneous solution. This method was tested using dibenzo crown ethers, which have a very low solubility in aqueous solution. The stability constants for the complexation of alkali and alkaline earth metal cations with different dibenzo crown ethers were determined in aqueous solution. Owing to the complex formation the total concentration of the ligand in solution increases. Dibenzo crown ethers absorb in the ultraviolet spectral range, hence the increase in the ligand concentration can be easily detected. Without the knowledge of the molar absorptivities of the ligands and of the corresponding complexes and of the solubilities, the stabilities of the complexes formed can be calculated under certain assumptions. To verify these assumptions, the solubilities of the dibenzo crown ethers and the molar absorptivities were determined. The kinetics of the solubilization process of the ligands was followed by spectrophotometric measurements. © 1997 John Wiley & Sons, Ltd.
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  • 10
    Electronic Resource
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    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 10 (1997), S. 777-780 
    ISSN: 0894-3230
    Keywords: tandem energy transfer-electron transfer ; photosensitized alkylation ; α,β-Unsaturated ketones ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: -α,β-Unsaturated ketones are not conveniently alkylated by radicals generated from tetraalkylstannanes via photoinduced electron transfer (PET), either by direct irradiation or when a singlet sensitizer (an aromatic nitrile, a pyrilium salt) is used. However, the procedure is successful with tetramethyl pyromellitate (TMPM) as the sensitizer. TMPM is promoted to the triplet state by energy transfer from the unsaturated ketones and then sensitizes the cleavage of alkylstannanes by electron transfer. The alkyl radicals thus formed finally add to the unsaturated ketones, giving the β-alkyl derivatives. © 1997 John Wiley & Sons, Ltd.
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  • 11
    Electronic Resource
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    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 10 (1997), S. 662-668 
    ISSN: 0894-3230
    Keywords: propan-1-ol oxidation ; alkaline hexacyanoferrate(III) ; ruthenium trichloride catalyst ; kinetic ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The oxidation kinetics of propan-1-ol by alkaline hexacyanoferrate(III) catalyzed by ruthenium trichloride were studied spectrophotometrically. The initial rate method was used for kinetic analysis. The reaction rate shows a fractional order in [oxidant] and [substrate] and a first-order dependence on [RuCl3]. The dependence on [OH-] is complicated. A reaction mechanism involving two active catalytic species is proposed. Each one of these species forms an intermediate complex with the substrate. The attack of these complexes by hexacyanoferrate(III) in rate-determining step produces a radical species which is further oxidized in the subsequent step. © 1997 John Wiley & Sons, Ltd.
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  • 12
    Electronic Resource
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    Chichester : Wiley-Blackwell
    Journal of Physical Organic Chemistry 10 (1997), S. 731-736 
    ISSN: 0894-3230
    Keywords: solvatochromism ; preferential solvation ; aryliminomethylpyridinium iodides ; binary mixtures ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Studies on the solvatochromic behaviour of N-methyl-4- and N-methyl-2-[(4-dimethylaminophenyl)iminomethyl]pyridinium iodide dyes in a variety of solvents and the preferential solvation of the former dye in binary mixtures of protic and non-protic solvents are presented and interpreted in terms of solute-solvent and solvent-solvent interactions. © 1997 John Wiley & Sons, Ltd.
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  • 13
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    Journal of Physical Organic Chemistry 10 (1997), S. 787-796 
    ISSN: 0894-3230
    Keywords: carbonyl oxide ; ozone ; structure and reactivity ; oxygen atom transfer ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The structural and chemical properties of 1,3-dipolar peroxidic species (X - O - O) such as ozone (X=O) and carbonyl oxides (X=R2C) depend significantly on the nature of X. Although cyclic O3 is thermodynamically unstable, dioxiranes, cyclic isomers of carbonyl oxides, are isolable and have been fully characterized. In contrast to the well known electrophilic nature of ozone, carbonyl oxides usually act as a nucleophilic oxygen transfer agent, but their reactivity could be altered by substituents. It is expected that the chemistry of R2C - O2 species will provide a good starting point for a better understanding of dioxygen complexes (X - O2) with various Xs. Interesting aspects of carbonyl oxide chemistry are discussed, including methods of generation, cyclization to dioxiranes and the nature of their oxygen transfer activities. © 1997 John Wiley & Sons, Ltd.
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  • 14
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    Journal of Physical Organic Chemistry 10 (1997), S. 825-834 
    ISSN: 0894-3230
    Keywords: N-tert-butoxycarbonyl-L-phenlylalanine-pyridine complex ; isotope effect ; x-ray structure ; vibrational spectroscopy ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The x-ray structure of the complex between N-tert-butoxycarbonyl-L-phenylalanine and pyridine shows that the crystals are held together by short hydrogen bonds between the OH group and the N atom of the pyridine ring [RO(H)· · ·N=2·574(3) Å]. Deuteration of the OH and NH groups results in a small expansion of the unit cell associated with an elongation of the O· · ·N distance [RO(D)· · ·N=2·610(3) Å]. The infrared spectra show very broad stretching protonic bands in the range 2750-600 cm-1. The isotopic ratio ν(OH· · ·H)/ν(OD· · ·N) of nearly unity suggests a double minimum potential with a low barrier for the hydrogen bridge. The Raman and near-infrared spectra are discussed. The perturbation of the fundamental modes and of the overtones of pyridine suggests that the complex is not of the proton transfer type. The broad absorptions of the hydrogen bridge disappear in the near-infrared region. The perturbation of the pyridine overtones is discussed. © 1997 John Wiley & Sons, Ltd.
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  • 15
    ISSN: 0894-3230
    Keywords: 13C and 1H magic angle spinning NMR ; x-ray diffraction ; 1,8-bis(dimethylamino)naphthalene ; picrolonic acid ; multicentre hydrogen bonding ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: An ionic complex of 1,8-bis(dimethylamino)naphthalene with picrolonic acid was studied by 13C and 1H magic angle spinning and x-ray diffraction. Structural and spectroscopic features of this compound were investigated. The detailed x-ray structure of this complex is described. A multicentre model of hydrogen bonding in proton sponges {[Me2N - H· · ·NMe2]+· · ·Xδ-} is proposed and the influence of weak intermolecular intractions with the nearest electronegative atom in crystal lattice of a proton sponge on the strong intramolecular [N - H· · ·N]+ hydrogen bonding is demonstrated. It appears that weak interactions of electronegative atoms with the nearest methyl hydrogen atoms can influence the localization of the proton in the intramolecular [N - H· · ·N]+ hydrogen bridge. © 1997 John Wiley & Sons, Ltd.
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  • 16
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    Journal of Physical Organic Chemistry 10 (1997), S. 797-813 
    ISSN: 0894-3230
    Keywords: statistics ; regression ; correlation analysis ; incorrect data processing ; least-squares method ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Examples are given from older and more recent literature (kinetics, ionization equilibria, complex formation in solution, dipole moment determination, thermochemistry, resonance energies, NMR shifts, photoelectron spectroscopy) where experimental data were processed in an incorrect way from the point of view of statistics. The results were more or less biased, sometimes completely wrong. Corrected procedures, based entirely on the least-squares method, are reported; in several cases methods are proposed. Some hints are given as to how these mistakes can be avoided, how they can be revealed in the literature and how the literature data can be recalculated: the last task is the most difficult. © 1997 John Wiley & Sons, Ltd.
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  • 17
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    Journal of Physical Organic Chemistry 10 (1997), S. 879-884 
    ISSN: 0894-3230
    Keywords: solvolysis ; correlation analysis ; azide salt effect ; β-deuterium kinetic isotope effect ; YBnCl ; 1-alkyl-1-chloro-1-(4-methyl)phenylmethanes ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The solvolysis of 1-alkyl-1-chloro-1-(4-methyl)phenylmethanes (4a-d) in aqueous acetone, aqueous ethanol, aqueous methanol and ethanol-trifluoroethanol was studied. Grunwald-Winstein-type correlation analysis using the YBnCl scale suggests significant nucleophilic solvent intervention in the case of 1-chloro-1-(4-methyl)phenylethane (4a). Increasing bulkiness of the 1-alkyl substituent from methyl (4a) to ethyl (4b), to isopropyl (4c) and to tert-butyl (4d) resulted in a gradual change to limiting SN1 mechanisms. The observed excellent linear correlations with YBnCl and the good solubility in high-water-containing binary solvents made 4d a suitable reference standard for deriving more YBnCl values. A positive azide salt effect was realized in the solvolysis of 4a but not 4d. A small decrease in the β-deuterium kinetic isotope effect from 4a to 1-chloro-1-(4-methoxyphenyl)propane (5) suggested the presence of additional stabilization of the benzylic cationic transition state. Howver, no relationship between k(CH3)/k(CD3) and the solvent effect was found. The superiority of employing the YBnCl scale over the combination of YCl and I scales in the mehanistic study was observed. © 1997 John Wiley & Sons, Ltd.
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  • 18
    ISSN: 0894-3230
    Keywords: N-1-adamantyl-N-p-tolylcarbamoyl chloride ; solvolysis ; decompositions ; hydroxylic solvent ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---In hydroxylic solvents, N-1-adamantyl-N-p-tolylcarbamoyl chloride undergoes a facile rate-determing ionization with very little assistance from nucleophilic solvation (very low sensitivity to changes in solvent nucleophilicity). In the relatively nucleophilic aqueous ethanol or aqueous acetone, the cation formed reacts directly with the solvent. In fluoroalcohols, the low nucleophilicity of the solvent allows an effective competition from a pathway involving disproportionation to the 1-adamantyl cation and p-tolyl isocyanate, followed by reaction of the new cation either with solvent or with the chloride ion formed in the initial ionization. Grunwald-Winstein plots against YC1 values show for different binary solvent systems a marked dispersion, which can be considerably reduced by incorporation into the analyses of a term governed by the aromatic ring parameter (I). © 1997 John Wiley & Sons, Ltd.
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  • 19
    ISSN: 0894-3230
    Keywords: Electron transfer properties ; substituted flouranthene derivatives ; redox potentials ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The oxidation and reduction potentials of a series of related even non-alternant derivatives of 7,14-disubstituted acenaphth[1,2-k] fluoranthenes, and also fluoranthene, 7,10-diphenylfluoranthene and 8,9-dihydrodiindeno[1,2-j;2′,1′-] fluoranthene, were determined in organic solvents by cyclic voltammetry. The effects of steric hindrance on conjugation of the substituents with the central polycyclic aromatic hydrocarbon nucleus were evaluated. The semi-empirical molecular orbital calculation programs OMEGAMO, Extended Hückel, AM1 and PM3 were used to obtain optimal geometries and calculated HOMO and LUMO energies. As a further refinement, COSMO solvation was included in the AM1 calculations. The redox properties were correlated with data derived from the various semi-empirical calculations and the quality of these correlations is discussed. Inclusion of solvation energies in the computed molecular orbital energies results in a significant improvement in the correlation between observed and calculated oxidation potentials. © 1997 John Wiley & Sons, Ltd.
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  • 20
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    Journal of Physical Organic Chemistry 10 (1997), S. 697-715 
    ISSN: 0894-3230
    Keywords: silanes ; polysilanes ; molecular mechanics calculations ; MM3 ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: -Molecular structures, conformational energies, heats of formation and vibrational spectra have all been fit using the MM3 force field for a group of 48 silanes and polysilanes for which experimental data are available. © 1997 John Wiley & Sons, Ltd.
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  • 21
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    Journal of Physical Organic Chemistry 10 (1997), S. 680-686 
    ISSN: 0894-3230
    Keywords: 8-aminoquinoline ; x-ray structure ; vibrational spectra ; three-center hydrogen bond ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: -The x-ray structure of 8-aminoquinoline indicates that one of the NH bonds of the NH2 group forms a three-center hydrogen bond, the major component being the intramolecular hydrogen bond and the minor component the intermolecular hydrogen bond. The IR and Raman spectra of 8-aminoquinoline and of its N-deuterated counterpart reflect the non-equivalence of the two NH(D) bonds and the weakness of the hydrogen bridge. © 1997 John Wiley & Sons, Ltd.
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  • 22
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    Journal of Physical Organic Chemistry 10 (1997), S. 675-679 
    ISSN: 0894-3230
    Keywords: chemical contrast ; scanning near-field optical microscopy ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Repeatable and stable scanning near-field optical microscopy (SNOM) images are obtained under shear-force control if uncoated, i.e. cold and sharp, tapered fiber tips are used. True chemical contrast is seen for the first time on organic crystals due to the different near-field reflectivities of different chemical species on partly oxidized anthracene. The topography spans a Z-range of 500 nm. The surface roughness is tolerable and the sites of reaction can be related to crystal structure data. A submicroscopic local resolution of 18 nm has been obtained for chemical contrast, discriminating different chemical species even with poorly reflecting organics on rough crystal surfaces. Thus, reflection-back-to-the-fiber SNOM will find wide applications for both transparent and opaque samples. All drawbacks with blunt and hot metal-coated tips at a 〈10 nm distance from the surface in previous SNOM setups are overcome. © 1997 John Wiley & Sons, Ltd.
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  • 23
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    Journal of Physical Organic Chemistry 10 (1997), S. 607-611 
    ISSN: 0894-3230
    Keywords: electron transfer photochemistry ; 7-(spirocyclopropane)quadricyclane ; cyclopropylcarbinyl rearrangements ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The electron transfer photo-sensitized reaction of 7-(spirocyclopropane)quadricyclane (1) with methanol produces two rearranged mono-methanol adducts, 2 and 3, and a bis-methanol adduct, 4. The products reveal that 1·+ reacts by stereo- and regiospecific attack of methanol on one trisubstituted cyclopropane ring. The resulting free radical rapidly undergoes one or two (consecutive) cyclopropylcarbinyl to butenyl rearrangements. The mono-adducts are formed by net hydrogen abstraction, the di-adduct via a (secondary) electron transfer reaction of 3. © 1997 John Wiley & Sons, Ltd.
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  • 24
    ISSN: 0894-3230
    Keywords: γ-lactones ; base-catalysed hydrolysis ; substituted isobenzofuranones ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Rate coefficients were measured for the base-catalysed hydrolysis of a series of γ-lactones, i.e. 39 substituted 3-(aryl- and alkylmethylene)-(Z)-1(3H)-isobenzofuranones (3-aryl- and alkylmethylenephthalides) in 70% (v/v) aqueous dioxane at 30·0 °C. A Hammett reaction constant for the 3- or 4-substituted phenyl series is ca 1·5, whereas those for the 2-substituted phenyl and 4-substituted 1-naphthyl series, using para-σ values, are ca 1·0 and 1·9. These results are related to an electrostatic field effect model. A very successful correlation between the rates of alkaline hydrolysis of all 39 phthalides and the carbonyl stretching frequencies in chloroform was found. Substituent effects in widely different environments give linearly related effects on both reactivity and physical properties. Computational studies using the semi-empirical AM1 method correctly modelled both the details of the mechanistic pathway and the substituent effects. © 1997 John Wiley & Sons, Ltd.
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  • 25
    ISSN: 0894-3230
    Keywords: competitive reactivity ; reaction coordinates ; gas-phase ion-molecule chemistry ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Using the method of competitive reactivity of two functional groups in the same molecule, anionic elimination reactions show considerable kinetic selectivity for small differences in leaving group thermochemistry, in structures of the general type YCH2CH2CH2Z, where Y and Z are good anionic leaving groups. © 1997 John Wiley & Sons, Ltd.
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  • 26
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    Journal of Physical Organic Chemistry 10 (1997), S. 612-622 
    ISSN: 0894-3230
    Keywords: neural networks ; structure-odour relationships ; sandalwood ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Neural networks have proved to be particularly successful in their ability to identify non-linear relationships. This paper shows that a three-layer back-propagation neural network is able to learn the relationship between the sandalwood odour and molecular structures of 85 organic compounds belonging to acyclic, cyclohexyl, norbornyl, campholenyl and decalin derivatives. Four steric and three electronic parameters were used to describe each molecular structure. Odour was coded by a binary variable. The neural network was used to classify the compounds into two groups and to predict their odours (sandalwood or non-sandalwood). The results obtained were compared with those given by discriminant analysis, and found to be better. The most important descriptors were revealed on the basis of correlation analysis. © 1997 John Wiley & Sons, Ltd.
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  • 27
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    Journal of Physical Organic Chemistry 10 (1997), S. 631-636 
    ISSN: 0894-3230
    Keywords: chlorine transfer ; N-chlorosuccinimide ; amino compounds ; kinetics ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---A kinetic study of the reactions of N-chlorosuccinimide (NCS) with glycine (Gly), sarcosine (Sar), 2-methylalanine (2MA), proline (Pro) and pyrrolidine (Pyr) was carried out. The reactions were found to be first order with respect to both NCS and the amine or amino acid and order -1 in proton concentration. In order to calculate the experimental activation parameters, the effect of temperature on the reaction rates was studied. The ionic strength and buffer concentration were found to have no effect on the rate constant. A reaction mechanism involving Cl+ transfer from NCS to the amine or amino acid to form an N-chloro compound is proposed © 1997 John Wiley & Sons, Ltd.
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  • 28
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    Journal of Physical Organic Chemistry 10 (1997), S. 577-584 
    ISSN: 0894-3230
    Keywords: carbenium ions ; reduction ; NAD(P)H analogues ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Hydride transfer mechanisms of the reductions of xanthylium ion by NAD(P)H analogues (i.e. BNAH, HEH and AcrH2) were investigated. Both the kinetic observations and an analysis of thermodynamic driving forces for each mechanistic step in all the possible mechanisms indicate that the reductions are initiated by a rate-determining electron transfer, followed by a fast hydrogen atom abstraction. The mechanism of the reductions of 9-phenylxanthylium and triphenylmethylium ions by BNAH were also investigated and are similarly discussed. © 1997 John Wiley & Sons, Ltd.
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  • 29
    ISSN: 0894-3230
    Keywords: peroxyoxalate reaction intermediate ; chemiluminescent decomposition ; kinetics ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The peroxyoxalate system undergoes one of the most efficient chemiluminescence reactions and is the only one considered to involve an intermolecular chemically initiated electron exchange luminescence mechanism, with proven high efficiency. Several reactive intermediates have been proposed, which, upon interaction with a fluorescent activator, lead to excited-state generation. The synthesis and spectral characterization of 4-chlorophenyl O,O-hydrogen monoperoxyoxalate (1), a compound analogous to one of the proposed reactive intermediates, was recently reported. Here the results of a kinetic study on the chemiluminescent decomposition of this peracid 1, catalyzed by oxygen bases (potassium hydroxide, potassium tert-butoxide and potassium p-chlorophenolate) or nitrogen bases [pyridine, imidazole and 1,8-bis(dimethylamino)naphthalene] are presented. Based on the dependence of the observed rate constants on the base concentration, kinetic schemes are proposed for the catalyzed decomposition of 1 and rate constants are assigned to specific reaction steps. The results obtained with the nitrogen bases give further support in favor of 1,2-dioxetane dione as the reactive intermediate in the peroxyoxalate reaction. © 1997 John Wiley & Sons, Ltd.
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  • 30
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    Journal of Physical Organic Chemistry 10 (1997), S. 637-645 
    ISSN: 0894-3230
    Keywords: 3-nitropyrazole ; structure ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The molecular and crystal structure of 3-nitropyrazole was determined by X-ray analysis. The triclinic unit cell contains 12 molecules which form four hydrogen-bonded (N - H···N) trimers. Each trimer comprises of pseudo-ring in a flattened envelope distorted towards a chair conformation. The crystal packing consists of layers formed by centrosymmetric related trimers joined through C - H···O interactions. Ab initio calculations were performed on 3(5)-nitro- and 4-nitropyrazole and their corresponding protonated forms up to the MP2/6-31G** level of theory. The origin of the difference in aqueous basicities between both nitropyrazoles is discussed. © 1997 John Wiley & Sons, Ltd.
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  • 31
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    Journal of Physical Organic Chemistry 10 (1997), S. 669-674 
    ISSN: 0894-3230
    Keywords: azoles ; diiodine complexes ; basicity ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The diiodine basicity (a soft Lewis basicity) of 15 azoles (imidazoles, pyrazoles and triazoles) was measured by means of the formation constant of the diiodine-azole complexes in heptane at 298 K. The preferred sites of diiodine fixation are the nitrogens N-3 in imidazoles, N-2 in pyrazoles and N-4 in 1,2,4-triazoles. The diiodine basicity decreases with (i) the number of ring nitrogens, (ii) benzofusion, (iii) field electron-withdrawing effects of substituents on N-1 and (iv) for pyrazoles only, steric effect of substituents on N-1. In imidazoles and 1,2,4-triazoles, the lengthening and branching of alkyl groups on N-1 increase significantly the basicity, and 1-(adamant-1-yl)imidazole is the most basic of the azoles studied. © 1997 John Wiley & Sons, Ltd.
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  • 32
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    Journal of Physical Organic Chemistry 10 (1997), S. 755-767 
    ISSN: 0894-3230
    Keywords: substitution ; singlet-triplet gaps ; carbenes ; vinylidenes ; density functional calculations ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---NDensity functional theory calculations of multiplet splittings are presented that agree closely with experimental measurements for six carbenes and six vinylidenes. The calculations are further analyzed to gauge the relative importance of different factors influencing the stabilities of the different spin and electronic states. In the carbene series, with halogen substituents, orbital rehybridization effects and charge redistribution effects are large. The magnitude of π-conjugation (back-bonding) is calculated to be only moderately larger (6-8 kcal mol-1) for singlets than for triplets based on natural bond orbital-derived conjugation energies. In the vinylidene series, substituion effects are primarily associated with through-space and through-bond inductive stabilization effects, especially hyperconjugation; π-conjugation effects are found to be small © 1997 John Wiley & Sons, Ltd.
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  • 33
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    Journal of Physical Organic Chemistry 10 (1997), S. 768-776 
    ISSN: 0894-3230
    Keywords: Diels-Alder addition ; butadiene ; thiocarbonyl oxides ; heterodienophiles ; heterocumulene ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Diels-Alder reactions of various thiocarbonyl S-oxides and thiocarbonyl S,S-dioxides with buta-1,3-diene were studied by semiempirical AM1 and PM3 methods. Calculations show that the reactions of such unsymmetrical heterodienophiles pass through asynchronous transition states (TSs) with C=S π* involved in the reaction. Calculated activation energies indicate that the reactivity of these heterodienophiles, viz. R2C=S, R2C=SO and R2C=SO2, decrease gradually with successive addition of oxygen atoms to the thiocarbonyl sulfur. This is in good agreement with the experimental observations. The predictions based on LUMO and deformation energies show that the above reactivity trend corresponds to a gradual destabilization of LUMO of the dienophile and increase in deformation energy of both diene and dienophile with increase in the number of oxygen atoms around sulfur. Thiophosgene and their S-oxides in Diels-Alder reactions are found to be less reactive than the parent analogues. Monosubstituted (Z/E)-sulfines react with buta-1,3-diene to form cis and trans products through closely lying TSs. Calculations predict that (E)-sulfine has a higher reactivity than the Z-isomer, in reasonable agreement with experimental results. © 1997 John Wiley & Sons, Ltd.
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  • 34
    ISSN: 0894-3230
    Keywords: iminoxyl radicals ; spectra ; kinetics ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---A series of new iminoxyl radicals, Et3C(C=NO·)Bu-tert (1), tert-C5H11(C=NO·) Bu-tert (2), (tert-C5H11)2C=NO· (3), Et3C(C=NO·)Ph (4), PhCH2CMe2(C=NO·)Bu-tert (5), PhCMe2(C=NO·)Bu-tert (6) and Me2CH(C=NO·)C5H11-tert (7), was characterized by EPR and in some cases visible spectra and decay kinetics in solution. Isolation of 1H and 3-tert-butyl-4,4-diethyl-5-methyl-4,5-dihydro-5-isoxazolol (9) among the decomposition products of 1 was consistent with a previously unrecognized mode of iminoxyl reaction in which the initial step is an internal β-H abstraction. Molecular orbital calculations on H2C=NO· indicate a C-N-O angle of about 140° and a 10 kcal mol-1 barrier to inversion. Rate constants for the reaction of tert-Bu2C=NO· (8) with a series of olefins were measured. © 1997 John Wiley & Sons, Ltd.
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  • 35
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    Journal of Physical Organic Chemistry 10 (1997), S. 27-32 
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: 1,3-Dihydro-1-oxido-3-methyl-1,2,3-benziodoxaphosphole 3-oxide (4) and 1-H-1-oxido-5-methyl-1,2,3-benziodoxathiole 3,3-dioxide (5) were used to cleave p-nitrophenyl diphenyl phosphate (PNPDPP) (2) in aqueous micellar cetyltrimethylammonium chloride (CTACI) in phosphate buffer at pH 8. The maximum pseudo-first-order cleavage rate constants (with 1·0×10-4 M 4 or 5 and 1·0×10-5 M 2) were 0·0016 s-1 for 4 ([CTAC1]=0·01 M) and 0·0013 s-1 for 5 ([CTAC1]=0·001 M). Reagents 4 and 5 were, respectively, 44 and 57 times less reactive toward PNPDPP than iodosobenzoate (1) under comparable conditions. Ab initio electronic structure calculations were carried out on 1, 4 and 5 and their protonated forms. Calculated structural parameters were compared with crystallographic data where possible. The computed atomic net charge on the oxido oxygens of 1, 4 and 5 was found to track the reactivity toward PNPDPP. © 1997 John Wiley & Sons, Ltd.
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  • 36
    ISSN: 0894-3230
    Keywords: Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The 13C chemical shifts of eight series of para- or meta-substituted benzaldehyde 2-aminobenzoylhydrazones possessing both amide and imine functionalities were measured. The 13C chemical shifts were used to study the transmission of electronic substituent effects along the heteroaromatic side-chain of the substituted aromatic ring. In addition to the C=N bond, the benzoylhydrazones possess in their side-chain polarizable C=O and phenyl π-units. The benzylidenic ring-substituent chemical shifts were analysed by the dual substituent parameter approach to separate the inductive and resonance effects. The negative ρI and ρR values observed (i.e. reverse substituent effects) indicate a significant π-polarization of the C=N bond. The highly negative ρR values, especially those in the case of meta substitution, suggest a contribution from a marked secondary field-transmitted resonance effect. The results are compared with those obtained for other hydrazones or imines. Variation of the electron-withdrawing ability of the N2 substituent is seen to have a systematic effect on the ρI values. Reverse substituent effects are also observed at the C-1″ site of the 2-aminobenzoyl ring while C-4″ shifts show normal behaviour, consistent with the general concept of the π-polarization that each π-unit of the side-chain is polarized largely as a localized system. Accordingly, the π-polarization effect is seen efficiently to propagate also along a heteroaromatic chain. On the other hand, the C=O sites exhibit normal, although fairly slight, dependence on the benzylidenic substituent indicating an insignificant role of π-polarization at that site. The effects of the solvent, CDCl3 vs. DMSO-d6, on the ρI and ρR values are also considered. © 1997 John Wiley & Sons, Ltd.
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  • 37
    ISSN: 0894-3230
    Keywords: 2-(2′-methoxy-3′-α-cumylphenyl)benzotriazole ; conformational preference ; light stabilizers ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---A pronounced conformational preference of the 3′-α-cumyl substituent in 2-(2′-methoxy-3′-α-cumylphenyl)benzotriazole is suggested from the results of molecular dynamics simulations. This suggestion is supported by both solution NMR spectral and solid-state x-ray crystallographic data. The orientation of the α-cumyl substituent may have implications on the relative performance of 3′-substituted 2′-hydroxyphenylbenzotriazole light stabilizers in polar media. © 1997 by John Wiley & Sons, Ltd.
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  • 38
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    Journal of Physical Organic Chemistry 10 (1997), S. 196-206 
    ISSN: 0894-3230
    Keywords: ethane-1,1-diol ; ethane-1,1,2-triol ; conformation ; ab initio study ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Ab initio optimizations at the HF/6-31G level and single-point calculations at the MP2/6-31G**//6-31G level were performed on ethane-1,1-diol and ethane-1,1,2-triol. Their conformational properties are discussed in terms of the anomeric effect, gauche effect and internal O-H interactions. The results showed a parallel behaviour with ethane-1,2-diol. The solvent effect was taken into account using the SCRF theory with a general cavity shape which is defined by the molecular surface. © 1997 John Wiley & Sons, Ltd.
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  • 39
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    Journal of Physical Organic Chemistry 10 (1997), S. 233-241 
    ISSN: 0894-3230
    Keywords: surface effects ; radical anions ; benzoyl radical ; coupling of radicals ; surface catalysis ; electron transfer ; reactions in the double laye ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Benzaldehyde in THF reacts with lithium metal to give the expected reduction product, benzyl alcohol, plus benzoin and benzyl as minor products. The kinetics of the overall reaction as well as the partial rate coefficients of the several steps have been determined under various reaction conditions. It was found that adsorption on the surface and electron transfer from the lithium to benzaldehyde are the slow steps. The experimental results show interesting surface effects, and evidence for significant radical intermediates, which were characterized by their epr spectra and trapping experiments, results useful to gain insight into the mechanisms of these and other related reactions. © 1997 John Wiley & Sons, Ltd.
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  • 40
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    Journal of Physical Organic Chemistry 10 (1997), S. 292-304 
    ISSN: 0894-3230
    Keywords: calixarenes ; bipyridine ; lanthanides ; luminescence ; preorganization ; solvent effect ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Based on MD simulations, the structures of Eu3+ and EuCl3 complexes of bipyridine-substituted calixarenes in different environments (in vacuo and in acetonitrile and water solutions) were modelled. The data account for the differences in their luminescence properties. The role of the calixarene platform, preorganization of the ligands, and an explicit account of counterions in different environments are analysed. © 1997 John Wiley & Sons, Ltd.
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  • 41
    ISSN: 0894-3230
    Keywords: aryliminodimagnesium ; condensation with NO2 and CO groups ; addition to CN group ; single electron transfer efficiency ; σ-complexation ability ; inter- and intramolecular competition ; bifunctional substrates ; positional effect of functional groups ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The reactions of aryliminodimagnesium [ArN(MgBr)2, IDMg] with p′-substituted p-cyanobenzophenones, 1-cyano-9-fluorenone, o-, m- and p-dicyanobenzenes and o-, m- and p-nitrobenzonitriles were examined, and the relative yields of products were referred to the previous results of electron spin resonance studies. The products of condensation with carbonyl and nitro groups and of addition to cyano groups were formed. From the variations of the yields caused by the molar ratio of the magnesium reagent versus substrates and by the substituents of both reactants, the preferred groups were determined. The groups of p- and m-substrates are consistent with the position of highest density of free electrons in the anion radicals, whereas those of the o-substrates are inconsistent. The consistency indicates competition of functional groups reflecting the relative ability of single electron acceptance from the reagent, whereas the inconsistency is ascribed to cooperation of neighbouring groups for σ-complexation with the Mg atom of the reagent. The categories of competition and cooperation are discussed in relation to fundamental features and general governing factors proposed for the IDMg reactions of monofunctional substrates. © 1997 John Wiley & Sons, Ltd.
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  • 42
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    Journal of Physical Organic Chemistry 10 (1997), S. 305-310 
    ISSN: 0894-3230
    Keywords: non-covalent interactions ; host-guest complexes ; fluorinated phenyl compounds ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Complexation constants with the macrocyclic azoniacyclophane CP44 and phenyl guest compounds with at least four fluorine atoms or alternatively protons at the ring were obtained by NMR shift titrations in water. The fluorinated compounds show free energies of complexation which are smaller by ΔΔG=3·4-7·7 kJ mol-1 in comparison with the protonated compounds. The NMR shifts induced upon 100% complexation (CIS values) were obtained simultaneously from non-linear least-squares fitting and indicate intra-cavity inclusion in all cases. The CIS values agree roughly with screening constants calculated from aromatic ring current and linear electric field effects, the latter resulting from the permanent charges at the host compound. Molecular mechanics calculations (CHARMm) indicate that intracavity inclusion is possible with all compounds with negligible strain induced (〈1 kJ mol-1) in the macrocycle upon complexation. In contrast, α-cyclodextrin can accommodate fluorinated phenyl compounds only at the rim of the cavity without larger strain. Preliminary data with α-cyclodextrin, obtained by competitive UV-visible titration with methyl orange, indicate again a smaller association free energy (ΔΔG=1·-7 kJ mol-1) for pentafluorphenol compared with normal phenol as guest. © 1997 John Wiley & Sons, Ltd.
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  • 43
    ISSN: 0894-3230
    Keywords: hydrophobic cavity characterization ; cyclophanes ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The guest-binding behavior of two different cyclophane hosts, each being capable of providing a three-dimensionally extended hydrophobic cavity toward aromatic guests, was examined in aqueous media: a steroid cyclophane bearing four rigid cholate moieties and an octopus cyclophane having four flexible double-chain segments. Even though the binding constant for 2,7-dihydroxynaphthalene with the steroid cyclophane was comparable to that with the octopus cyclophane, the guest binding modes were very different from each other, as confirmed by 1H NMR spectroscopy. That is, the steroid cyclophane incorporates the guest into its rigid macrocyclic cavity with axial geometry whereas the octopus cyclophane provides a three-dimensional space created by the macrocyclic skeleton and the flexible hydrocarbon chains so that the long axis of the guest becomes more or less perpendicular to the molecular axis of the host upon complexation. Temperature-dependent molecular recognition by these hosts toward 8-anilinonaphthalene-1-sulfonate was examined by means of fluorescence spectroscopy. Characteristic differences in the guest-binding mode between these hosts were sensitively reflected in the thermodynamic entropy change on host-guest complexation and the temperature-dependent microscopic viscosity experienced by the guest at the binding site. © 1997 John Wiley & Sons, Ltd.
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  • 44
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    Journal of Physical Organic Chemistry 10 (1997), S. 254-272 
    ISSN: 0894-3230
    Keywords: π-π interactions ; self-assembly ; catenanes ; cyclophanes ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The recent surge of interest in the control of molecular organization in both the solution state (i.e. self-assembly) and the solid state (i.e. crystal engineering) has led researchers to recognize increasingly the importance of weak non-covalent interactions. The design and synthesis of an efficient molecular construction set are dependent upon a very close interplay between x-ray crystallography and synthetic chemistry. π-π Stacking interactions between π-donors, such as hydroquinone, resorcinol or dioxynaphthalene residues, and π-accepting ring systems, such as bipyridinium or π-extended viologen units, can govern the self-assembly of a variety of complexes and interlocked molecular compounds in both the solid and solution states. Non-covalent bonding interactions (i.e. π-π interactions) can be considered as information vectors: they define and rule the self-assembly processes that lead to the formation of the desired molecular and supramolecular architectures, and thereafter they still govern the dynamic processes occurring within the self-assembled structures and superstructures. The manner in which such molecules and supermolecules can contribute to an understanding of non-covalent interactions at both structural and superstructural levels is described, with reference to numerous examples of self-assembly processes in synthesis, of dynamic processes in the solution state, and of the packing of molecules and molecular complexes in the solid state. © 1997 John Wiley & Sons, Ltd.
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  • 45
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    Journal of Physical Organic Chemistry 10 (1997), S. 323-334 
    ISSN: 0894-3230
    Keywords: redox-switched amphiphiles ; ferrocene derivatives ; vesicles ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Thirty ferrocene derivatives were prepared and their ability to form vesicles in aqueous solution when oxidized was assessed. The compounds included alkyl ferrocenylmethyl ether derivatives of the form C10H9FeCH2OR in which R=octyl, dodecyl, tetradecyl, hexadecyl, octadecyl and eicosanyl. One single-tailed amine derivative, C10H9FeCH2NR2, R=octadecyl, was studied. Alkylferrocene derivatives had the form C10H9FeR in which R=butyl, decyl, tetradecyl, hexadecyl, octadecyl, eicosanyl and docosanyl. Sixteen symmetrical 1,1′-disubstituted ferrocenes were also studied. Three ethers were of the form C10H8Fe-1,1′-(CH2OR),2, R=tetradecyl, hexadecyl and octadecyl. Four corresponding dialkyl derivatives of the form C10H8Fe-1,1′-R2, R=decyl, tetradecyl, hexadecyl and octadecyl, were assessed. Finally, a range of 1,1′-disubstituted ferrocene derivatives were analyzed. These all had the form C10H8Fe-1,1′-(COR)2, for which R has the following identities: octyl, tridecyl, pentadecyl and heptadecyl (ketones); heptadecyloxy, 3-cholesteryl and 3-cholestanyl (esters); and two amides, R=NHC18H37 and N(C18H37)2. The alkyl and ether derivatives could be readily oxidized and formed vesicular aggregates upon sonication. The ketones, esters and amides could be oxidized but the ferricenium derivatives did not form stable aggregates. An interesting observation is that the aggregates formed were vesicular whether the ferrocene derivative had one or two alkyl tails. © 1997 John Wiley & Sons, Ltd.
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  • 46
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    Journal of Physical Organic Chemistry 10 (1997), S. 273-285 
    ISSN: 0894-3230
    Keywords: cation-π interactions ; calix[n]arenes ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Non-covalent intermolecular forces have been recognized as a very important part of molecular interactions in complex biological systems. The fundamental functions of living matter such as transcription of genetic information in DNA, spatial arrangement of protein molecules, enzymatic functions or immunity system response are enabled owing to the presence of weak non-covalent forces based on hydrogen bonding interactions, van der Waals interactions, electrostatic interactions, hydrophobic effects, etc. Recently, among them so-called "cation-π" interactions have been proved to contribute to the overall binding process in various artificial or biological systems. Calix[n]arenes have emerged as an important family of molecules with promising applications in many branches of chemistry. Because of their suitable molecular preorganization with aromatic units being "concentrated' in a relatively small space, calix[n]arenes represent interesting compounds exhibiting an enhanced ability for cation-π interactions. The importance of such forces in calix[n]arene chemistry is demonstrated here on several recent examples. © 1997 John Wiley & Sons, Ltd.
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  • 47
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    Journal of Physical Organic Chemistry 10 (1997), S. 335-342 
    ISSN: 0894-3230
    Keywords: hydrophobic interactions ; aqueous solutions ; living systems ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Evidence is provided for the enormous role of hydrophobic interactions in aqueous solutions. It is concluded that complementary functions of hydrophilic and of hydrophobic species are in continuous operation and that these are a conditio sine qua non for the existence of the liquid. With regard to the supermolecular aggregations, hydrophobic interactions are operative on the highest hierarchic levels of the system organization, i.e. at the interface and at the holes around dissolved hydrophobic species. It is further emphasized that water is essential both for the unity and for the differentiation of each living organism. With regard to its role for the differentiation of the body, the hydrophobic interactions are of paramount importance, notably those provided by amphipathic solutes. The cell membrane is considered to be the result of interactions between the highest hierarchic levels of intracellular and extracellular water. The hydrophobic double layer provides the barriers for the separation of intracellular and extracellular water and at the same time the connections for recognition and for exchange of information between them. The DNA structures obtain conservative boundary conditions for their surrounding water systems which do not freeze at -60 °C. These water systems are dynamically superior to all other parts of the water system of the organism. It is suggested that more knowledge about the abilities of liquid water can be obtained by giving appropriate attention to its properties within the living body. © 1997 John Wiley & Sons, Ltd.
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  • 48
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    Journal of Physical Organic Chemistry 10 (1997), S. 514-524 
    ISSN: 0894-3230
    Keywords: eterocycles ; donor/acceptor units ; push-pull conjugated molecules ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The synthesis and spectroscopic investigation of a number of push-pull ethenes in which the donor moiety is represented by a π-excessive five-membered heterocycle (pyrrole, indole and thiophene) and the acceptor group is a π-deficient heterocyclic azine ring (pyridine, pyrazine, pyrimidine, pyridazine) are described. The intramolecular charge transfer in both the neutral compounds and the corresponding N-alkylpyridinium triflates is discussed and confirmed on the basis of three different descriptors, ΔλHetPh,Δλ+n, and Δλsolv1solv2, that take into account the substitution of a phenyl with a heterocyclic donor ring, charge effects and solvatochromism, respectively. According to the ΔλHetPh descriptor, the intramolecular charge transfer in the described diheteroarylethenes increases upon increasing the electron-withdrawing capacity of the acceptor, sustained by the presence of either more than one nitrogen atom or the positive charge in the heterocyclic azine. The described pyridinium derivatives belong to the rarely investigated class of dimethine cyanine dyes. The response of the 13C and 15N NMR chemical shift data appears to be less clear because of the low sensitivity of the NMR probes to remote substitution. © 1997 John Wiley & Sons, Ltd.
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  • 49
    ISSN: 0894-3230
    Keywords: trianylmethanes ; 9-arylxanthenes ; ion and radical staleclitres ; amphihydric compounds ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Thermodynamic stability properties of 11 p-substituted trityl and seven 9-phenylxanthyl carbocations are reported in sulfolane and of their conjugate carbanions in DMSO. The cations are compared by calorimetric heats of hydride transfer from cyanoborohydride ion, their first and second reduction potentials, their pKR+s in aqueous sulfuric acid, 13C chemical shifts and free energies of methoxy exchange. Carbanions are compared by their heats and free energies (pKHA) of deprotonation and their first and second oxidation potentials. Radicals are compared by their oxidation and reduction potentials. Their bond dissociation energies are derived by alternative routes: from the carbocation and its reduction potential and from the carbanion and its oxidation potential. The various properties are correlated against each other and against appropriate Hammett-type substituent parameters. Correlations between the different measured properties reported here range from fair to excellent. Despite their importance as historic prototypes for the three trivalent oxidation states of carbon, trityl and xanthyl systems are atypical models for comparing transmission of electron demand in other series of carbocations, radicals or carbanions with significantly different structures. The 9-arylxanthyl series is especially poor because of its insensitivity to substituent effects. The effects of substituents on various properties which represent the stabilities of R+s correlate surprisingly well against those for corresponding R-s. Accordingly, compensating effects on the oxidation and reduction of a series of related R·s may lead to a nearly constant electron transfer energy and absolute hardness for the series. In contrast, the free energies for interconversion of the carbocations and carbanions which determine the gap between pKR+ and pKHA are very sensitive to structural change. © 1997 John Wiley & Sons, Ltd.
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  • 50
    ISSN: 0894-3230
    Keywords: n-Butyllithium ; benzoic acid ; nucleophilic addition ; deprotonation ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---An evaluation of a branching vs sequential mechanism for the reaction of benzoic acid with n-butyllithium favors the latter. © 1997 John Wiley & Sons, Ltd.
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  • 51
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    Journal of Physical Organic Chemistry 10 (1997), S. 347-350 
    ISSN: 0894-3230
    Keywords: benzene · · · hexafluorobenzene ; supramolecular synthon ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The benzene · · · hexafluorobenzene stacking interaction was evaluated at several levels of theory. At the MP2/6-31G** level, it is estimated that the interaction is stabilizing by approximately 3.7 kcal mol-1. Lower levels of theory perform poorly on this system. This is a fairly strong non-covalent interaction, suggesting this motif may be a valuable supramolecular synthon. © 1997 John Wiley & Sons, Ltd.
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  • 52
    ISSN: 0894-3230
    Keywords: N-(aminoalkyl)-9-phenanthrenecarboxamides ; molecular structures ; folded conformations ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The molecular structures of three tertiary N-(aminoalkyl)-9-phenanthrenecarboxamides were investigated in solution and the solid state by means of 1H NMR spectroscopy and x-ray crystallography. The tertiary amides exist as a mixture of E and Z isomers in solution and the aminoalkyl groups exist as a mixture extended and folded conformers. A crystalline N-(aminoethyl)amide was obtained as the pure Z isomer in which the phenanthrene and amide planes are nearly perpendicular and the aminoethyl group is folded over the less hindered face of the amide group. Rotation about the Ar-C(O) bond is slow in resolution rendering these molecules chiral on the NMR time-scale. As a consequence, the α-methylene protons display large diasterotopic splittings when the aminoalkyl group is syn to the amide carbonyl. Folded conformations place the Z and E aminoalkyl groups in the deshielding and shielding regions, respectively, of the phenanthrene rings, resulting in large differences in chemical shifts. © 1997 John Wiley & Sons, Ltd.
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  • 53
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    Journal of Physical Organic Chemistry 10 (1997), S. 563-576 
    ISSN: 0894-3230
    Keywords: free energies of solvation ; chloroform ; water ; linear response ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---Monte Carlo statistical mechanics simulations were used to compute absolute free energies of solvation in chloroform for 16 organic molecules. The intermolecular interactions were described by classical potential functions consisting of Coulomb and Lennard-Jones interactions. The partial charges for the solutes were derived from fitting to the electrostatic potential surfaces of ab initio 6-31G* wavefunctions. First, free energy perturbation (FEP) calculations yielded relative free energies of solvation. These were converted to absolute quantities through perturbations to the reference molecule, methane, which was annihilated. The average error in the FEP-computed free energies of solvation is 0·8 kcal mol-1. Then, a linear response equation, which contains terms proportional to the Lennard-Jones (van der Waals) and Coulombic components of the solute-solvent energy and to the solvent-accessible surface area of the solute, was optimized and reproduced both the FEP-calculated and experimental free energies of solvation with average errors of ca 0·5 kcal mol-1. In addition, an existing solute dataset for water, which had previously been fitted to the same equation, was expanded from 16 to 35 molecules. The fit of the Monte Carlo results for this set of molecules in TIP4P water to the experimental free energies of hydration yielded an average error of 0·8 kcal mol-1. Combination of the predictions of free energies of solvation in water and chloroform yields partition coefficients, log P, with an average error of 0·3-0·4 log unit. © 1997 John Wiley & Sons, Ltd.
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  • 54
    ISSN: 0894-3230
    Keywords: inclusion complexation ; cyclobis (paraquat-p-phenylene) ; cyclophanes ; substituted aromatics ; cooperative non-covalent cavity ; external interactions ; Chemistry ; Theoretical, Physical and Computational Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: ---The cooperative nature of non-covalent interactions which give rise to inclusion complexes involving cyclobis(paraquat-p-phenylene), 14+, and related cyclophane derivatives, 24+-44+, with substituted 1,4-phenyl and 4,4′-biphenyl guests has been studied by spectroscopic techniques and ab initio and semiempirical molecular orbital methods. Inclusion complex formation and stability are primarily determined by the combination of two main interaction modes involving aromatic stacking of the guest within the cyclophane cavity and external interactions between guest side arms and the exterior of the cyclophane. A balance between cavity and external forces results in supramolecular association and is shown to change depending upon the functionality and substitution of the guest. Cavity binding was probed using 1,4-phenyl and 4,4′-biphenyl guests, where for the 1,4-phenyl guests the primary basis for energy stabilization with 14+ is found to be short-range stabilizing electrostatic forces complemented by small amounts of polarizability and charge-transfer. In contrast, the cavity binding between substituted 4,4′-biphenyl guests and 14+ is determined by almost equal contributions of polarizability and electrostatics. The effect of solvent is shown to have only a small effect on the computed geometry of 14+ complexes, but its impact upon binding energies is substantial. The first solvation shell of the cyclophanes is computationally approximated by 12 acetonitriles and satisfies the requirements of the 16 relatively acidic protons on the bipyridinium groups. Good correlations between the computed (with solv ation) and experimental 14+ binding energies are found. The degree of linear correlation improves substantially when the comparison between computed and experimentally observed binding energies is restricted to structurally similar (number of aromatic rings, number of substituents and position of substitution) molecular guests. Furthermore, computed molecular properties, such as polarizability, maximum hardness, softness and electronegativity of the isolated guests, correlate well with 14+ binding energies based upon the same requirement of guest similarity. The non-covalent forces associated with the external cyclophane interactions were studied with guest molecules built from symmetrical 1,4-extensions of hydroquinone composed of aliphatic or ethyleneoxy side arms. In particular, side arm length and functionality, and the position and type of heteroatoms along the chain, were systematically varied to define the external interactions between the guest side arms and different host cyclophanes. Specifically, the ethyleneoxy linkages are shown to provide a large chelate and cooperative effect which direct the binding with 14+. In order to probe further the special geometric and electronic character of 14+, we have synthesized and tested a new supramolecular host, 24+, similar to 14+ but where a pentacycloundecane unit replaces one of the xylyl groups. Both experimental and computed data on the new host emphasize the ideal geometry and electronic nature of the 14+ molecular receptor for aromatic guests. The inclusion complexes discussed in this paper are important not only because they, or similar entities, are the main components of many rotaxanes, catenanes and other switchable molecules, but because the intermolecular interactions involved, such as electrostatics, polarizability and charge-transfer, are ubiquitous in supramolecular chemistry. The information reported on the specific interactions involving the 14+-44+ molecular receptors with substituted aromatic guests can also be extended by analogy to many systems of broad interest. © 1997 John Wiley & Sons, Ltd.
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  • 55
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    Chemistry - A European Journal 3 (1997), S. 1238-1243 
    ISSN: 0947-6539
    Keywords: gels ; electron microscopy ; scanning tunneling microscopy ; self-assembly ; ureas ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: New low molecular weight gelators based on the structure R—NHCONH—X—NHCONH—R have been synthesized and tested for their ability to cause gelation of organic solvents. Compounds 2 (R = n-dodecyl, X = -(CH2)9-), 3 (R = n-dodecyl, X = -(CH2)12-), 4 (R = n-dodecyl, X = 4, 4′-biphenyl), and 5 (R = benzyl, X = -(CH2)9-) form thermoreversible gels with a wide range of organic solvents, at concentrations well below 10 mgmL-1. Depending on the nature of the R and X groups, the solvents that undergo gelation include hexadecane, p-xylene, 1-octanol, n-butyl actetate, cyclohexanone, and tetralin. The gels are stable up to temperatures well above 100°C, but are easily disrupted by mechanical agitation. Light microscopic investigations revealed that compounds 2-5 spontaneously aggregate to form thin flat fibers, which can be several hundreds of micrometers long and only 2-10 μm wide. Depending on the solvent, multiple twists in the fibers are observed. In the gels, these fibers form an extended three-dimensional network, which is stabilized by multiple mechanical contacts between the fibers. Electron microscopy and X-ray powder diffraction revealed that the fibers consist of stacks of sheets. The thickness of the sheets is 3.65 and 3.85 nm for 2 and 3, respectively. Scanning tunneling microscopic investigations of 2 absorbed on graphite showed that 2 forms long ribbons with a width of 5.0 nm. In the ribbons the molecules have a parallel arrangement, with the long molecular axis perpendicular to the long ribbon axis. The two urea groups within a given molecule are each part of mutually parallel extended chains of hydrogen bonds. Based on these observations a model is proposed for the arrangement of the molecules in the fibers. In this model the bisurea molecules aggregate through hydrogen-bond formation into long ribbons, which assemble into sheets. In these sheets the ribbons are tilted. Finally, the sheets stack to form long thin fibers. This model is supported by molecular dynamics simulations.
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  • 56
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    Chemistry - A European Journal 3 (1997), S. 1254-1268 
    ISSN: 0947-6539
    Keywords: peptide bundles ; peptides ; pseudo-peptides ; template synthesis ; tripodal ligands ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The stereochemical course of the formation of the two diastereomers of trimethyl 2,2′,2″-nitrilotris[2-(benzoylamino)acetate], 2a and 2b, is described. The structures of both isomers were confirmed by X-ray diffraction studies. Diastereomer 2b could be obtained in larger quantities by epimerisation of 2 a to 2 b with catalytical amounts of NaOMe. The (RRR/SSS)-triester 2 b is a suitable template for the synthesis of tripodal peptide bundles. Saponification of 2 b yielded the C3-symmetrical racemic triacid 4 b, which was coupled with amino acid methyl esters and dipeptide esters to give pseudo-hexapeptides and pseudo-nonapeptides, respectively. The resulting mixtures of diastereomers were easily separated by crystallisation. Their absolute configuration at the template unit (RRR or SSS) was established by means of the CD spectra. The pseudo-hexapeptide (SSS)N(BzGly*ValOMe)3 (14) was saponified to yield the optically pure triacid (SSS)N(BzGly*ValOH)3 (23). Compound 23 is an ideally preorganised template for the production of longer tripodal peptides. This was illustrated by the synthesis of two pseudo-pentadecapeptides. Peptide bundles with polar side chains (histidine and serine) or end groups (catechol or hydroxamate units) were synthesised by using the templates 4 b, 22 and 23 as anchors.
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  • 57
    ISSN: 0947-6539
    Keywords: calixarenes ; hydrogen bonds ; molecular boxes ; noncovalent assembly ; supramolecular chemistry ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Calix[4]arenes diametrically substituted at the upper rim with two melamine units spontaneously form well-defined box-like assemblies in the presence of two equivalents of 5,5-diethylbarbituric acid. These assemblies, consisting of nine different components, are held together by 36 hydrogen bonds and are stable in apolar solvents at concentrations of up to 10-4M. This paper reports the first X-ray crystal structure, and the MALDI TOF mass spectra together with the complete 1H NMR spectroscopic characterization of these hydrogen-bonded assemblies. The crystal structure clearly shows that the assemblies are stereogenic, as a result of the antiparallel orientation of the two rosette motifs. Furthermore, the synthesis of twelve new 1,3-bis(melamine)calix[4]arenes carrying different numbers and types of functionalities at the upper rim is described. Detailed 1H NMR spectroscopic studies on the assembly behavior of these functionalized calix[4]arenes shows that 1) polar substituents (e.g. nitro, cyano) hardly affect the stability of the hydrogen-bonded assembly; 2) hydrogen bond donating or accepting groups, like amino and acetamido, can disturb assembly of the boxes under certain conditions by destabilizing the calix[4]arene pinched cone conformation as a result of intramolecular hydrogen bond formation; and 3) sterically bulky groups (e.g. tBu) can significantly inhibit the formation of the hydrogen-bonded assembly, but this effect very much depends on the exact positions of the groups.
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  • 58
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    Chemistry - A European Journal 3 (1997), S. 1846-1851 
    ISSN: 0947-6539
    Keywords: disproportionations ; dithiocarba-mate ; homogeneous catalysis ; vulcanization ; zinc ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Model studies have shown that cross-link precursors, that is, intermediates in the sulfur vulcanization of rubber, are transformed into cross-links by a nonsymmetric but regioselective disproportionation mechanism. Thus, two equivalents of the crosslink precursor of the type R—S—S—X are transformed into X—S—X and the actual cross-link R—S—S—S—R. Exchange of sulfur atoms is a prerequisite. A mechanism involving an SNi′ reaction with an allylic moiety, suggested in the literature, has not been observed. The disproportionation reaction is catalyzed by rubber-soluble zinc-dithiocarbamate complexes, an important class of vulcanization accelerators. By virtue of ligand-functional-group exchange reactions these complexes serve to transport and exchange sulfur atoms.
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  • 59
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    Chemistry - A European Journal 3 (1997), S. 1852-1859 
    ISSN: 0947-6539
    Keywords: conductivity ; europium ; gold ; magnetic properties ; superstructures ; tin ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The title compound was prepared from the elements by reaction in a sealed tantalum tube at 1320 K followed by slow cooling to 970 K. EuAuSn crystallizes with a pronounced subcell of space group Imma (KHg2 type). Additional very weak reflections required a quintupled b axis. The superstructure was refined from single-crystal four-circle diffractometer data (Imm 2, a = 479.1(1) pm, b = 3833.6(5) pm, c = 820.1(1) pm, Z = 20, wR2 = 0.0834, 3675 F2 values and 94 variables). Six crystallographically different europium sites occur in the superstructure. Each europium site has an ordered near-neighbour environment of six gold and six tin atoms in the form of two tilted hexagons. Magnetic susceptibility measurements show Curie-Weiss behaviour above 50 K with an experimental magnetic moment of 7.6(1) μB/Eu, indicating divalent europium. EuAuSn orders antiferromagnetically at about 12 K and undergoes a metamagnetic transition at a critical field of 2.0(2) T. Electrical conductivity measurements show metallic behaviour with a room temperature value of 260 μΩcm. 151Eu and 119Sn Mössbauer spectroscopic experiments are compatible with divalent europium and show complex magnetic hyperfine field splitting at low temperature.
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  • 60
    ISSN: 0947-6539
    Keywords: ab initio calculations ; aluminum ; boron ; pi interactions ; sulfur ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The structures of H2X—Y—XH2 compounds (X = B, Al; Y = O, S) have been studied by means of ab initio calculations at the MP4/6-311 G**/MP2/6-311G** level. The potential energy surface (PES) of the aluminoxane species H2Al—O—AlH2 is rather flat: the energy differences between the various located extrema are less than 1.5 kcal mol-1, and this shows that the observed geometrical preference is not due to electronic factors. For the sulfur analogues H2X—S—XH2 (X = B, Al), three minima are located on the PES: a planar C2v structure, a Cs structure in which one hydrogen atom bridges the two X atoms, and a C2v structure with two bridging hydrogen atoms. For H2Al—S—AlH2, the Cs structure is the most stable, and the planar C2v and the dibridged structures lie 3.2 and 6.7 kcal mol-1 higher, respectively. Qualitatively similar results are obtained for H2B—S—BH2: the Cs and planar C2v structures are nearly isoenergetic, and the dibridged minimum lies 19.4 kcal mol-1 above the planar C2v minimum. These results are rationalized by analyzing the ability of these systems to bend, depending on the nature (oxygen or sulfur) of the central Y atom. The conjugation in these species is also discussed, and calculations on model systems H2X—YH (X = B, Al; Y = O, S) are presented.
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  • 61
    ISSN: 0947-6539
    Keywords: immobilized catalysts ; polysiloxanes ; P ligands ; rhodium ; sol-gel processes ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The reaction of four equivalents of the monomeric trimethoxysilyl(T)-functionalized ether-phosphine ligand CyP(CH2CH2OCH3)(CH2)3SiR3 (R = OMe [1 a(T0)], Me [1 b]) with [{μ-ClRh(COE)2}2] yielded the monomeric pseudo 14 electron rhodium(I) complexes [ClRh(PO)(P∼O)] (2a(T0)2, 2 b). For the sol-gel process the complex 2 a(T0)2 was protected by introduction of the volatile, reversibly binding ligand pyridine. Thus, the monomeric compound 2 a(T0)2 was co-condensed with two and eight equivalents of the co-condensation agent MeSi(OMe)2(CH2)6(MeO)2SiMe (D0-C6-D0) to give the polysiloxane-bound congeners 2(Tn)2(Di-C6-Di)y (y = 2 and 8, respectively; i = 0-2; n = 0-3). The polysiloxane-bound complex 2(Tn)2-(Di-C6-Di)2 was treated with a variety of small molecules in the gas/solid and liquid/solid interphases. It was shown that a facile cleavage of the Rh-O bond in the ether-phosphine chelate occurred even in the solid state. The reaction of 2(Tn)2-(Di-C6-Di)2 with carbon monoxide, carbon disulfide, and diphenylacetylene resulted in the irreversible coordination of the molecule to the metal. In the presence of pyridine, the polysiloxane-bound complex 2(Tn)2-(Di-C6-Di)2 oxidatively added hydrogen to give the octahedrally configurated complex [ClRhH2(Py)(P ∼ O)2] [6(Tn)2(Di-C6-Di)2]. Treatment of dry 2(Tn)2-(Di-C6-Di)2 with ethene led to the reversible formation of the corresponding complex. Although the materials display low surface areas, at least 75% of the rhodium centers within the matrix are accessible to the rather bulky tolan molecules. The complexes 2(Tn)2(Di-C6-Di)y (y (y = 2, 8) show high activities and selectivities in the hydrogenation of tolan. The conversion was found to depend markedly on the amount of co-condensate (D0-C6-D0) and on the polarity of the solvent. The polysiloxane-bound complexes 2(Tn)2(Di-C6-Di)y are more active than their monomeric congener 2 a(T0)2.
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  • 62
    ISSN: 0947-6539
    Keywords: alkoxy radicals ; Barton reaction ; density functional calculations ; mass spectrometry ; radicals ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The reactivity of neutral alkoxy radicals in the absence of any interfering intermolecular interactions is investigated by means of the recently introduced method of neutral and ion decomposition difference (NIDD) spectra. These are obtained from quantitative analysis of the corresponding neutralization-reionization (NR) and charge reversal (CR) mass spectra. The following trends emerge: alkoxy radicals with short (C1—C3) or branched alkyl chains give rise to α-cleavage products, whereas longer-chained alkoxy radicals undergo 1,5-hydrogen migrations from carbon to oxygen, that is, Barton-type chemistry. This facile rearrangement has been studied in detail for n-pentoxy radicals by isotopic labeling experiments and computation at the Becke 3 LYP/6-31 G* level of theory. Further, the NIDD spectra of 3-methylpentoxy radicals permit for the first time the identification of the diastereoselectivity of the gas-phase hydrogen migrations. The results from the NIDD method are compared to those from earlier studies in the condensed phase. This new mass spectrometric approach is suggested as a tool for the examination of intramolecular reactions of free alkoxy radicals which can usefully complement theoretical studies.
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  • 63
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    Chemistry - A European Journal 3 (1997), S. 1894-1902 
    ISSN: 0947-6539
    Keywords: asymmetric synthesis ; chirality ; diselenides ; selenium ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The synthesis of various nonracemic diselenides by different methods is described. These diselenides are precursors for optically active selenium electrophiles. Their facial selectivity upon addition to styrene was investigated with respect to the chiral moiety neighboring the selenium. Diselenides 1 i, 1 n, and 1 v yielded addition products 7 with diastereomeric excesses up to 95%. Some diselenides, intermediates, and products of the addition reaction were investigated by 77Se NMR spectroscopy.
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  • 64
    ISSN: 0947-6539
    Keywords: heterocycles ; fluorine ; porphyrinoids ; zinc ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: 2,3,7,8,12,13,17,18-Octafluoro-5,10,15,20-tetraphenylporphyrin has been prepared from 3,4-difluoropyrrole and benzaldehyde under Lindsey conditions. An X-ray crystal structure study of its ZnII complex has shown that the macrocycle core is nonplanar, a result in apparent contradiction with a blue-shifted UV/Vis spectrum. The results reported here demonstrate that a wide range of β-octafluoro-meso-arylated porphyrins, a new class of highly electron-deficient ligands, are potentially accessible from 3,4-difluoropyrrole, thus opening the door to, inter alia, efficient and robust oxidation catalysts.
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  • 65
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    Chemistry - A European Journal 3 (1997), S. cpi 
    ISSN: 0947-6539
    Keywords: Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 66
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    Chemistry - A European Journal 3 (1997), S. 1884-1889 
    ISSN: 0947-6539
    Keywords: conducting materials ; electronic structure ; magnetic properties ; phase transitions ; sulfur ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ba6Ni25S27, synthesized by solid-state reaction of BaS, NiS, and Ni at 675°C, is cubic (Pm3m, a = 10.057(1) Å). The structure was refined by using powder X-ray diffraction and Rietveld methods with Rp = 6.28%, Rwp = 8.13%, χ2 = 3.120. The structure, isotypic with Ba6Co25S27, consists of an extended network of Ni8S14 pseudo-cube clusters, NiS6 octahedra, and Ba6S octahedra. Extended Hückel calculations of this compound indicate the band structure near the Fermi level to be composed mostly of d-character orbitals of tetrahedral Ni, and reveal a peak in the density of states slightly below the Fermi level. The temperature dependence of the electrical resistivity exhibits a local maximum with thermal hysteresis at around 230 K. Above and below this transition, the slope of the resistivity is positive, with a room-temperature resistivity (ρ = 0.23 mωcm) in the range for that of a poor metal conductor. Magnetic susceptibility measurements from 4 to 900 K indicate a sharp change in slope at around 225 K, with a steadily increasing susceptibility up to 900 K. The susceptibility below 225 K suggests Pauli paramagnetic behavior. Low-temperature powder X-ray diffraction and subsequent structure refinement shows that the lattice parameter, a, undergoes a slight change in slope at temperatures of around 235 K.
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  • 67
    Electronic Resource
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    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997) 
    ISSN: 0947-6539
    Keywords: Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 68
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    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997), S. 1911-1916 
    ISSN: 0947-6539
    Keywords: Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 69
    ISSN: 0947-6539
    Keywords: high-pressure chemistry ; high-temperature chemistry ; hydrogen ; Jupiter ; metallic hydrogen ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electrical conductivities of hydrogen were measured recently at 93-180 GPa (0.93-1.8 Mbar), 0.28-0.36 mol cm-3, and 2000-4000 K. Shock temperatures were measured up to values of 5200 K at 0.83 Mbar. The conductivities indicate a continuous transition from a semiconducting to metallic fluid at 140 GPa and 3000 K. The results indicate that hydrogen becomes metallic much closer to the surface of Jupiter than thought previously and that Jupiter has no core-mantle boundary.
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  • 70
    ISSN: 0947-6539
    Keywords: combinatorial chemistry ; compound libraries ; drug research ; solid-phase synthesis ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Through the advantages conferred in the speed of synthesis, combinatorial chemistry is making a significant impact on the process of drug discovery. The mix-and-split paradigm has been an effective method for the production of compound mixtures, although there is now a need for new, fast library approaches to generate well-characterised single compounds. Having already demonstrated the successful preparation and application of library mixtures, we have now developed a novel combinatorial method for the production of single compounds.
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  • 71
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    Chemistry - A European Journal 3 (1997), S. 1929-1932 
    ISSN: 0947-6539
    Keywords: gas-phase chemistry ; interstellar chemistry ; ion-molecule reactions ; star formation ; surface chemistry ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The distribution and nature of interstellar matter in the Galaxy is described. The chemical processes by which the rich variety of molecular species arise are briefly sketched. The importance of interstellar molecules in influencing the evolution of the Galaxy is emphasized.
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  • 72
    ISSN: 0947-6539
    Keywords: gas-phase chemistry ; interstellar chemistry ; kinetics ; low-temperature chemistry ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Very recently, methods have been developed for studying the rates of chemical reactions between electrically neutral species in the gas phase at temperatures as low as 13 K. Here we review this exciting development in gasphase chemical kinetics. Emphasis is placed on the importance of the information which the experiments have provided, both from the viewpoint of posing new questions about the factors which control chemical reactivity and because of their relevance to the modelling of molecular synthesis in interstellar clouds.
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  • 73
    ISSN: 0947-6539
    Keywords: alkenes ; asymmetric synthesis ; natural products ; Lewis acids ; phosphane oxides ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A general, highly efficient methodology for obtaining both syn and anti β-hydroxyphosphine oxides by reduction of the corresponding β-ketophosphine oxides is described. The nature of the Lewis acid was found to be pivotal in determining the outcome of these reactions. Strongly chelating TiCl4 led to the anti isomer in high diastereoisomeric excess in noncoordinating solvents (CH2Cl2) at -78°C with BH3/py as reducing agent, while nonchelating CeCl3 gave a high excess of the syn isomer in coordinating solvents (THF) at the same temperature with LiBH4 as reducing agent. In the latter case, CeCl3 is essential in achieving high yields and stereoselectivity, since it allows the reaction to be performed at low temperatures. Otherwise, higher temperatures (0°C) are required, which lower both yields and selectivities. Moreover, each step of the protocol for the synthesis of stereodefined disubstituted olefins from alkylphosphine oxides (Warren's modification of the Horner procedure) has been optimized, and the optimized procedure has been applied to the synthesis of muscalure, the pheromone of the domestic fly.
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  • 74
    ISSN: 0947-6539
    Keywords: epothilone ; oxazoles ; cyclopropanes ; metathesis ; total synthesis ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: For structure-activity relationship studies, two series of epothilone A (1) analogues have been designed and synthesized, one containing an oxazole moiety instead of the thiazole heterocycle and the other containing a spirocyclopropane moiety in place of the gem-dimethyl group at position C-4 (4,4-ethano-epothilones). The olefin metathesis strategy in solution was utilized for the chemical synthesis of these compounds starting with key building blocks 7-9 for the oxazole series (compounds 2, 14-18, 21-26) and building blocks 8, 30, and 31 for the 4,4-ethano series (compounds 3,39-43, 46-51). The convergent strategy towards the designed epothilone A series involved a) an aldol condensation reaction, b) an esterification reaction, c) an olefin metathesis reaction catalyzed by [RuCl2(=CHPh)-(PCy3)2], and d) epoxidation of the macrocycle double bond.
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  • 75
    ISSN: 0947-6539
    Keywords: catenanes ; molecular recognition ; pseudorotaxanes ; supramolecular chemistry ; translational isomerism ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: As a result of cooperative noncovalent bonding interactions (namely, π-π stacking, [CH…O] hydrogen bonding, and [CH…π] interactions) supramolecular complexes and mechanically interlocked molecular compounds - in particular pseudorotaxanes (precatenanes) and catenanes - self-assemble spontaneously from appropriate complementary components under thermodynamic and kinetic control, respectively. The stereoelectronic information imprinted in the components is crucial in controlling the extent of the formation of the complexes and compounds in the first place; moreover, it has a very significant influence on the relative orientations and motions of the components. In other words, the noncovalent bonding interactions - that is, the driving forces responsible for the self-assembly processes - live on inside the final superstructures and structures, governing both their thermodynamic and kinetic behavior in solution. In an unsymmetrical [2]catenane, for example, changing the constitutions of the aromatic rings or altering the nature of substituents attached to them can drive an equilibrium associated with translational isomerism in the direction of one of two or more possible isomers both in solution and in the solid state. Generally speaking, the slower the components in mechanically interlocked compounds like catenanes and rotaxanes move with respect to each other, the easier it is for them to self-assemble.
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  • 76
    ISSN: 0947-6539
    Keywords: clusters ; colloids ; gold ; nanostructures ; quantum wires ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The fabrication of a supported and insulated quantum wire would be of great interest, especially if electronic information could be accessed to determine charging and conductivity profiles. The feasibility of forming one-dimensional configurations of ≈ 15 nm gold colloids and 1.4 nm gold clusters via template methods of synthesis has now been demonstrated. The template host material consisted of porous alumina membranes formed by an electrochemical anodic process. The pores of the membrane, and hence the parallel pore channels, were packed in a hexagonal array. Alumina membranes are excellent template materials because of their high degree of order, thermal and chemical stability, and optical clarity. Pore diameter was controlled by regulation of the applied anodic potential (ca. 1.4 nm V-1). The pore channels were filled by one of three methods: vacuum induction (colloids only), electrophoresis (clusters only), or immersion (clusters, which were then converted into colloids by heating). Rudimentary wires consisting of colloids and clusters were successfully formed. In both cases, the diameter of the pore channel exceeded that of the clusters or colloids. The wires thus formed conformed to the pore channel by forming helical secondary structures. It was not possible to form contiguous wires of clusters by immersion, or of colloids formed from clusters after heating. Composites (consisting of the gold-alumina system) were a bright scarlet color with an absorption maximum (λmax) at 519.5 nm. This is an unexpected result for spherical and small-diameter (10 nm) gold colloids, which normally absorb at λmax 525-530 nm, a ruby-red color. Possible causes of this small but remarkable blue shift are discussed below. A new Au55 cluster ligand system consisting of a silsesquioxane-derivatized thiol is also described.
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  • 77
    ISSN: 0947-6539
    Keywords: epothilone ; oxazoles ; cyclopropanes ; total synthesis ; macrolactonizations ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In order to probe structure-activity relationships in the epothilone area, two series of epothilone B analogues have been designed and synthesized. The first series containing an oxazole moiety in place of a thiazole on the side chain was constructed by utilizing key intermediates 7-9 or 10, 12, and 13 (Scheme 1), whereas the second series containing an ethano group instead of the gem-dimethyl group at position 4 was synthesized from fragments 42 and 43. A Yamaguchi-type macrolactonization reaction was used to construct the macrocycle from a secoacid, which was assembled, in both cases, by means of a) an aldol reaction, b) an Enders alkylation, and c) a Wittig-type reaction. This convergent strategy provided access to oxazole analogues 2,4,29-32 and 4,4-ethano derivatives 3,40,60-63 for biological studies.
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  • 78
    ISSN: 0947-6539
    Keywords: coordination polymers ; Prussian blue ; rhodium ; structure elucidation ; tin ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The new coordination polymer [(Me3SnIV)3RhIII(SCN)6] = 3∞[Rh{μ-(SCNSnMe3NCS)}3] (5) is readily accessible by straightforward self-assembly of [Rh(SCN)6]3- and (dehydrated) {Me3Sn}+aq ions. The architecture of 5 is strongly reminiscent of “super-Prussian-blue” systems reported earlier: there is a three-dimensional (3-D) framework involving {Rh8} pseudocubes as the basic building blocks, the Rh3+ ions being held apart by novel, nonlinear {SCN-SnMe3-NCS} spacers (d(Rh…Rh) = 1.27 nm). The complete lattice consists of two equivalent and independent, ideally interwoven 3-D frameworks. Three homologues of 5 with slightly modified R3Sn units (R = Et, nPr and nBu) have been prepared as well, but display X-ray powder diffraction patterns notably different from that of 5.
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  • 79
    ISSN: 0947-6539
    Keywords: cyclic voltammetry ; logic gates ; molecular devices ; pseudorotaxanes ; spectroelectrochemistry ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The electrochemical and spectroscopic properties of a pseudorotaxane formed in acetonitrile solution by self-assembly of a wire-type electron donor based on the tetrathiafulvalene unit and the cyclobis(paraquat-p-phenylene) tetracationic electron acceptor have been investigated. We show that a) reversible dethreading/rethreading cycles of the pseudorotaxane can be performed by either oxidation and successive reduction of the electron-donor wire or reduction and successive oxidation of the electron-accepting tetracationic cyclophane, and b) because of this special behavior, the input (electrochemical)/output (absorption spectrum) characteristics of this molecular-level system correspond to those of an XNOR logic gate.
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  • 80
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    Chemistry - A European Journal 3 (1997), S. 1997-2010 
    ISSN: 0947-6539
    Keywords: antisense agents ; chiral recognition ; oligonucleotides ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Modified oligonucleotides incorporating trans-4-hydroxy-N-acetyl-L-prolinol (trans-4-HO-L-NAP) or its D-analogue as sugar substitute were synthesised with adenine and thymine as nucleobases. All-adenine oligonucleotides built from (2S,4S) or (2R,4R)-cis-4-hydroxy-N-acetylprolinol were likewise prepared. Hybridisation studies revealed that heterocomplexes formed between polyU and homochiral trans-4-hydroxy-N-acetylprolinol-based oligomers of the same as well as of opposite chirality (polyU/trans-DA*13 and polyU/trans-LA*13). The former, however, were triple-stranded. Other complexes with ribonucleic acids were polyA/trans-LT*13 and polyU/cis-LA*13. Heteroduplexes with deoxynucleic acids were formed between trans-LA*13 and oligothymidylate. Interaction was also observed for cis-LA*13 and oligothymidylate, but not with the D-hydroxyprolinol analogues. Microcalorimetry proved this interaction to be the formation of a triple-stranded complex. Two heteroduplexes, trans-LA*13/dT13 and trans-LA*13/polyU, had similar or slightly increased stability when compared to the natural dA13/dT13 or dA13/polyU systems. Microcalorimetry clearly indicated the formation of a duplex, in contrast to interactions with N-acetylprolinol oligonucleotides of different stereochemistry. Moreover, the enthalpy change was of the same magnitude but the association constant was slightly lower. Natural nucleic acids thus clearly prefer hybridisation with L-hydroxyprolinol oligomers over D-hydroxyprolinol oligomers. For the series investigated, the L-trans oligomers (Figure 1) seem best to mimic natural oligonucleotides. These modified oligonucleotides formed homocomplexes if both strands were of the same chirality, that is, homocomplexes formed between trans-LA* and trans-LT* and between trans-DA* and trans-DT*, reflecting the isochiral pu-py pairing found in natural nucleic acids. Once more, however, calorimetry proved these to be triplex interactions. Heterochiral pairing was not observed between modified oligonucleotides, but only between modified oligonucleotides and natural polyU. The thermal stabilities of these heterochiral complexes differed clearly.
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  • 81
    ISSN: 0947-6539
    Keywords: arylphosphanes ; C-C coupling ; isotopic labeling ; palladium ; tin ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The reaction of methyl iodide and (excess) aryltributylstannane to give a methylarene has been studied with the focus on the realization of rapid coupling for incorporation of short-lived radionuclides into bioactive organic compounds. The coupling of methyl iodide with tributylphenylstannane (40 equiv) is accomplished in 〉90% yield within 5 min at 60°C with a tri-o-tolylphosphine-bound, coordinatively unsaturated Pd0 complex together with a CuI salt and K2CO3 in DMF. This protocol is applicable to a variety of homo- and heteroaromatic tin compounds, to give the corresponding methylated derivatives. The effects of the tri-o-tolylphosphine ligand, a Cu(I) salt, and DMF are discussed. This new protocol provides a firm chemical basis for the synthesis of 11CH3-incorporated PET tracers.
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  • 82
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    Chemistry - A European Journal 3 (1997), S. 2081-2081 
    ISSN: 0947-6539
    Keywords: carbohydrates ; correspondence ; dendrimers ; micelles ; nanospheres ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 83
    ISSN: 0947-6539
    Keywords: chirality ; gas-phase chemistry ; ion-molecule reactions ; regioselectivity ; ring-opening reactions ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The acid-induced ring opening of (S)-( - )-1,2-propene oxide (1S) and (R)-(+)-1,2-propene oxide (1R) has been investigated in gaseous CH4 and CH3F at 720 torr and in the presence of a nucleophile, NuOH (Nu = H or CH3). The mechanism of the ring-opening reaction has been assessed by modulating the composition of the gaseous mixture. Two reaction pathways are operative in the gas phase, both proceeding through complete inversion of configuration of the reaction center. A first process is detectable only in the CH3F/H2O systems and takes place within a persistent proton-bound complex generated by interaction of the epoxide with the CH3OH+2 ion, formed by methylation of H2O with (CH3)2F+. Such an intracomplex ring-opening pathway proceeds through proton transfer from the CH3OH+2 ion to the epoxide followed by motion of the neutral CH3OH moiety around the 1-H-oxonia-2-methyl-cyclo-propane structure (H-1R or H-1S) (k〈108 s-1) before attacking the ring carbons from the rear. In all the other systems with added CH3OH, this intracomplex pathway is preceded by a faster “extracomplex” pathway involving the attack of an external CH3OH molecule on the proton-bound adduct. The regioselectivity of the intracomplex process is similar to that of the extracomplex pathway. Both are characterized by a slight preference for the Cβ center of H-1 R (or H-1S) (extra-complex path regioselectivity: α/β = 0.72±0.05; intracomplex path regioselectivity: α/β = 0.71±0.05). The regioselectivity of H-1 R (or H-1S) is substantially different from that of the 1-Me-oxonia-2-methyl-cyclopropanes (Me-1 R or Me-1 S) toward the same nucleophile NuOH (α/β = 4.1±0.35 (Nu = H); 2.28±0.16 (Nu = CH3)). This difference is attributed to a transition structure wherein the Cα-O bond rupture increases from H-1 R (or H-1 S) to Me-1 R (or Me-1 S) and in passing from CH3OH to H2O. The regioand stereoselectivity of the gas-phase acid-induced ring opening of 1 S and 1 R are compared with those of related reactions carried out in solution.
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  • 84
    ISSN: 0947-6539
    Keywords: isocyanates ; „Jordan′s cation“ ; metallocenes ; peptides ; zirconium ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The organometallic cation [Cp2ZrCH3(thf)]+, employed as the tetraphenylborate salt (1), reacts cleanly in 1:1 stoichiometry with the isocyanates 2 derived from valine methyl ester or valylvaline methyl ester, respectively. In each case addition of the Zr-CH3 group to the isocyanate sp-carbon center is observed with formation of a functionalized zirconocene cation derivative containing a chelating N-metallated N-acetylvaline methyl ester (3a) or N-acetylvalylvaline methyl ester (3b) moiety, respectively, coordinated in the bent metallocene s̰-ligand plane. The spectroscopic data of 3, supported by an X-ray crystal structure analysis of the zirconated dipeptide derivative 3b, have revealed the presence of chelating (η1-O:η1-N)-coordination of the terminal N-acetyl groups in addition to a Zr-O=C interaction with the adjacent valyl amido group.
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  • 85
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    Chemistry - A European Journal 3 (1997), S. cpi 
    ISSN: 0947-6539
    Keywords: Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 86
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    Chemistry - A European Journal 3 (1997) 
    ISSN: 0947-6539
    Keywords: Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 87
    ISSN: 0947-6539
    Keywords: C-H activation ; carbene complexes ; cycloadditions ; 1,3-diamino-1,3-butadiene ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: 2-Methyl-1,3-dimorpholino-1,3-butadiene 1 reacted with α,β-unsaturated Fischer carbene complexes to give a wide range of different products depending on the substitution pattern. Thus, sevenmembered rings (4, 5 and 6) could be obtained from chromium complexes 2 with aromatic or vinylic groups at the β position. Similar results were observed when α-methyl-substituted carbene complex 7 a was used. Six-membered carbocycles (derivatives of cycloadducts 12 and 13) were isolated after reaction with both chromium and tungsten complexes bearing one or two alkyl groups at the β position (10 and 11). Moreover, cyclopentenones 20 were the main products when the starting carbene complexes were alkyl-substituted at both α and β positions (19a, b) or when aromatic (19c, d) instead of vinylic complexes were used. A bicyclo[4.1.0]heptene system 18 has also been obtained in the special case of reaction with β,β-dimethylvinylchromium complex 13b; its formation could be explained as a formal carbene insertion into a C-H bond. The behaviour of diene 1 towards alkoxymethylcarbene complexes 22 was unusual. The different reaction products (cyclopentadienes 23, bicyclo[3.1.0]hexenes 24, aromatic amine 25 and metallatrienes 26) imply a mechanism in which the deprotonation of the carbene complex by the diene is followed by Michael addition to the iminium salt formed.
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  • 88
    ISSN: 0947-6539
    Keywords: carboxamides ; helical structures ; lanthanides ; luminescence ; tridentate ligands ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The ligand N,N,N',N'-tetra-ethylpyridine-2,6-dicarboxamide (L9) reacts with trivalent lanthanide ions (LnIII) to give stable mononuclear triple-stranded helical complexes [Ln(L9)3]3+ (Ln = La to Lu). The crystal and molecular structures of [La(L9)3](ClO4)3.2.5C2H5CN (8) and [Eu(L9)3](TfO)3.2THF (9) show that the three ligand strands are each meridionally tricoordinated to produce a pseudo-tricapped trigonal prismatic arrangement of the nine donor atoms (six amide O and three pyridine N) around LnIII. The distortions in the LaIII coordination sphere of 8 are more significant than for EuIII in 9, and the photophysical studies on Eu-doped (2%) La, Gd, and Lu complexes confirm a better structural match of L9 for the heavy LnIII ions. The separation of contact and pseudo-contact contributions to the induced lanthanide paramagnetic NMR shifts in [Ln(L9)3]3+ shows that the triple-helical structure is maintained in acetonitrile, but a minor structural change relative to that observed in the solid state occurs between TbIII and ErIII leading to two distinct isostructural series for Ln = La-Tb and Ln = Er-Lu. The origin of this effect together with its consequences for the dynamic helical (P→M) interconversion and stability of [Ln(L9)3]3+ in solution are discussed. A detailed investigation of the emission properties of [Ln(L9)3]3+ (Ln = Eu, Tb) shows that mixed pyridine-carboxamide ligands can be used to simultaneously optimize the structural and photophysical properties in mononuclear triple-helical lanthanide building blocks.
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  • 89
    ISSN: 0947-6539
    Keywords: cadmium sulfide ; catalysis ; photochemistry ; semiconductors ; unsaturated amines ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Homoallyl amines were synthesized by visible-light irradiation of CdS powder in the presence of N-phenylbenzophenone imine and cyclohexene, 2,3-dihydrofuran, 2,5-dihydrofuran, 3,4-dihydropyran, 2-pentene, cyclopentene, 1-methylcyclohexene, or α-pinene. The structures of the products from the last three olefins were determined by single-crystal X-ray analysis to prove that C-alkylation of the imine had occurred. Thus, the reaction is formally an insertion of the imine into an allylic C-H bond of the olefin. It is proposed that a photogenerated electron-hole pair reduces the imine to an α-aminodiphenylmethyl radical and oxidizes the olefin with concomitant deprotonation to the corresponding allyl radical. Heterocoupling of these intermediates affords the final addition product. The overall reaction is therefore classified as type B semiconductor photocatalysis. The presence of acetic acid accelerates the reaction by rendering the reduction potential of the imine more positive. In the series 2,5-dihydrofuran/cyclopentene/3,4-dihydropyran, the decrease in apparent quantum yield with increasing driving force of olefin oxidation points to a significant contribution of secondary back electron transfer.
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  • 90
    ISSN: 0947-6539
    Keywords: glycals ; glycopeptides ; glycosylations ; β-mannosides ; oligosaccharides ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: N-Linked glycopeptides were synthesized by condensation of a highmannose anomeric amine bearing a pentasaccharide with aspartic-acid-containing tri- and pentapeptides through the agency of IIDQ. The pentasaccharide portion, corresponding to the „core“ region of all asparagine-linked glycoproteins, was assembled by means of glycal-derived thioethyl donors and glycal acceptors. The central mannose residue was established by inversion of the C2 hydroxyl of a glucosyl precursor in the pentasaccharide. The protecting-group scheme employed allows the extension of the pentasaccharide through the terminal mannose units. While a fully convergent coupling of the high-mannose carbohydrate to the peptide domain has thus been accomplished for the first time with a fully synthetic sugar, the stereochemical integrity of the anomeric center of the carbohydrate domain was not maintained and a mixture of glycopeptides was obtained.
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  • 91
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997), S. 1494-1498 
    ISSN: 0947-6539
    Keywords: arsenic ; cobalt ; density functional calculations ; structural elucidation ; Zintl anions ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: [As7(SiMe3)3] reacts with [(Cp*CoCl)2] to give black crystals of the ionic compound [(Cp*Co)3As6][CoCl4] (1). The cation [(Cp*Co)3As6]2+ consists of an As6 prism, with squares capped by [Cp*Co] fragments. When [(CptBuCoCl)2] is used instead of [(Cp*CoCl)2] in the reaction, dark red crystals of [(CptBuCo)3As6][CoCl3(thf)]2 (2) and green-black crystals of [(CptBuCo)2As4][Co3Cl8(thf)2] (3) can be obtained. The cation in 2 shows a structure very similar to that of 1. The [(CptBuCo)2As4]2+ cations in 3 can be described as a triple-decker sandwich complex with two [CptBuCo]+ fragments bridged by an As4 ligand. Density functional calculations reproduce the experimental data of 1 and 3 and allow an interpretation of molecular electronic structure and bonding in these and related compounds with As replaced by P and Co by Fe.
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  • 92
    ISSN: 0947-6539
    Keywords: duplex ; gel mobility ; nucleic acids ; oligonucleotides ; strand displacement ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Hexitol nucleic acids (HNAs) with four natural bases form stable and sequence-selective duplexes with RNA. This was investigated by Tm determinations and gel shift experiments. The CD spectra of an HNA-RNA duplex show similarities with the CD spectra of the A-form of dsRNA. Single-stranded HNAs are able to induce strand displacement in a double-stranded RNA sequence. An HNA-RNA duplex is a poor substrate for RNase H, and can inhibit the RNase H-mediated cleavage of a natural DNA-RNA substrate. The HNA-RNA hybrid enhances the activity of HIV reverse transcriptase.
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  • 93
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997), S. 1499-1504 
    ISSN: 0947-6539
    Keywords: gadolinium ; NMR spectroscopy ; prototropic exchange ; rare earth compounds ; water exchange rate ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The exchange rate of the coordinated water molecule in the neutral complex [Gd(DTPA-BBA)(H2O)] (DTPA-BBA = 1,7-bis[(N-benzylcarbamoyl)methyl]-1,4,7-triazaheptane-1,4,7-triacetate or diethylenetriaminopentaacetate N,N′-bis(benzylamide)) is slower than in the parent complex [Gd(DTPA)(H2O)]2-. From the analysis of the temperature dependence of the solvent 17O NMR transverse relaxation time in an aqueous solution of the paramagnetic complex, a value of 4.5 × 105 s-1 (at 298 K) is obtained for the exchange rate of the coordinated water molecule. This rate constant does not vary in the pH range 7-12. Conversely, over the same pH range and at 298 K and 20 MHz, the longitudinal water proton relaxivity increases from 4.8 to 6.5 s-1 mM-1. The analysis of the dependence of the longitudinal water proton relaxation rate on magnetic field and temperature at pH 7 and pH 12 shows that the increase in relaxivity at basic pH has to be assigned to the contribution of the prototropic exchange at the water molecule in the inner coordination sphere of the metal ion. This exchange process is catalyzed by OH- ions (kP = 1.7 × 109 M-1 s-1 at 298 K) and causes an increase in the observed relaxivity when it occurs at a rate larger than the exchange rate of the entire water molecule. At pH 12 the limiting effect of the slow exchange rate for the coordinated water molecule is removed, and the longitudinal water proton relaxivity measured at this pH then represents the maximum value attainable for this complex.
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  • 94
    ISSN: 0947-6539
    Keywords: conjugation length ; electrochemistry ; nonlinear optics ; oligomers ; poly-(triacetylene)s ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Poly(triacetylene)s [PTAs, —(C≡C—CR=CR—C≡C)n-] are a new class of linearly conjugated polymers with a nonaromatic all-carbon backbone. To explore structure-property relationships in PTAs, we prepared a series of monodisperse oligomers ranging from monomer to hexamer by oxidative Glaser-Hay coupling of a bifunctional („chain-forming“) (E)-hex-3-ene-1,5-diyne in the presence of an endcapping unit. All six oligomers are amazingly stable towards exposure to light, air, and temperatures beyond their melting points. They have been fully characterized and are readily soluble in a wide range of solvents. The conjugated rods are reversibly reduced in one-electron transfer steps and cannot be oxidized below +1.23 V vs. Fc/Fc+. The effective conjugation length in PTAs was estimated from the electronic absorption (UV/Vis) data, and various evaluation methods yielded convergence of the optical properties in the range of 7 to 10 monomer units. The nonresonant second-order molecular hyperpolarizability γ was measured in CHCl3 by means of the third harmonic generation (THG) at Δ = 1.907 μm. A plot of γ/n vs. n revealed a power law γ ≈ na for γ with a fitted exponent a = 2.5 ∓ 0.1. From the THG measurements, an effective conjugation length of about 10 monomer units was found, in surprisingly good agreement with the value obtained from UV/Vis spectroscopy data.
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  • 95
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    Electronic Resource
    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997), S. 1552-1556 
    ISSN: 0947-6539
    Keywords: Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Additional Material: 8 Ill.
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  • 96
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997), S. 1557-1562 
    ISSN: 0947-6539
    Keywords: enzyme catalysis ; EXAFS spectroscopy ; heterogeneous catalysis ; synchrotron radiation ; X-ray absorption spectroscopy ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ultimate success in the design of solid oxide catalysts as well as other covalently bonded or heterogenised organometallic catalysts predicates knowledge of precisely what structure it is that has to be targetted. This, in turn, demands the greatest possible precision in determining, under operating conditions, the structure of the catalyst in general and of the active site in particular. Combined X-ray absorption spectroscopy and X-ray diffraction are ideal tools for such in situ investigations. Examples of such studies and of engineered catalysts, the structure of which have been determined in atomic detail, are given.
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  • 97
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    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997), S. 1537-1541 
    ISSN: 0947-6539
    Keywords: arginine ; guanidines ; molecular recognition ; receptors ; supramolecular chemistry ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Bisphosphonates 2 and 3 represent the first artificial receptor molecules for alkylguanidinium ions. They bind to the guanidinium moiety by forming a 1:1 chelate complex, stabilized by a planar network of electrostatic interactions and hydrogen bonds. This hydrogen bonding configuration is identical to the „arginine fork“ postulated by Frankel as a key element in RNA-protein recognition of the AIDS virus. Our guanidinium-bisphosphonate complexes thus constitute the first synthetic model for this important biological interaction and demonstrate that the high binding energy can be a driving force for a conformational change in the receptor (induced fit, e.g., in the RNA). Although binding of monosubstituted alkylguanidines is generally strong (Ka ≈ 10 000 in DMSO), molecular tweezer 3 recognizes N- and C-amide-protected arginine derivatives especially well (Ka ≈ 300 000 in DMSO), because an additional hydrogen bond is formed between the amide and the phosphonate. Since 3 does not bind amines effectively, it is highly selective for arginine, even in the presence of lysine or other amino acids. For di-, tri-, and tetrasubstituted guanidines the association constant remains low (Ka≤1000 in DMSO) reflecting the increase in the steric bulk of the guest.
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  • 98
    ISSN: 0947-6539
    Keywords: catalysis ; chirality ; dendrimers ; molecular recognition ; surfaces ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: At first glance the topic of chiral dendrimers seems to be a contradiction in terms. However, recent studies reveal that both the building blocks of the dendrimer and the overall dendritic architecture can be chiral and that chirality can be introduced at various levels. The expression of optical activity in these enantiomerically pure dendrimers as a result of conformational (dis)order has proven to be of special interest. In this Concepts article we present the different approaches to introducing chirality in dendritic architectures, organized through their possible impact in fields such as biocompatibility, catalysis, molecular recognition, and surface chemistry. Also, the relation between molecular chirality of core or building block and the macroscopic chirality of dendritic objects is discussed.
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  • 99
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997), S. 1571-1578 
    ISSN: 0947-6539
    Keywords: carbohydrates ; molecular modeling ; preorganization ; sialyl Lewisx ; selectins ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A molecular modeling tool for the rational design of E-selectin antagonists based on the lead structure sialyl Lewisx has been developed. The binding affinity to the receptor is considerably influenced by the entropy and consequently by the antagonist's ability to place its pharmacophores in an optimal spatial arrangement, i.e., by its preorganization for binding. The computational model assesses the preorganization of a potential selectin antagonist with the aid of Monte Carlo (jumping between wells)/stochastic dynamics [MC(JBW)/SD] simulations. The model has been validated by correlating preorganization and bioactivity of several selectin antagonists. The results suggest that only preorganized compounds are likely to bind to E-selectin.
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  • 100
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    Electronic Resource
    Complex Formation of the Antiviral 9-[2-(Phosphonomethoxy)Ethyl]Adenine (PMEA) and of Its N 1, N 3, and N 7 Deaza Derivatives with Copper(II) in Aqueous SolutionAbbreviations and definitions: 2′-AMP2-, adenosine 2′-monophosphate; 3′-AMP2-, adenosine 3′-monophosphate; ATP4-, adenosine 5′-triphosphate; M2+, divalent metal ion; PA2- = PME2-, PMEA2-, and its twofold negatively charged deaza derivatives; R-PO2-3, simple phosphate monoester or phosphonate ligand with R representing a noncoordinating residue (see also Figure 1); TuMP2-, tubercidin 5′-monophosphate (=7-deaza-5′-AMP2-). Although the IUPAC nomenclature for the deazaadenine compounds is 3H-imidazo[4,5b]pyridine-7-amine (1-deazaadenine), imidazo[4,5c]pyridine-4-amine (3-deazaadenine), and pyrrolo[2,3d]pyrimidine-4-amine (7-deazaadenine), the trivial names and the numbering system for purines are retained in the present study to facilitate the comparison with the parent compound, PMEA2-, and other adenine derivatives. For example, 1-deaza-PMEA is thus named 9-[2-(phosphonomethoxy)ethyl]-1-deazaadenine. In mathematical expressions and tables, 1-, 3-, and 7-deaza-PMEA are written as 1d-, 3d-, and 7d-PMEA. In the text the expression „PMEAs“ encompasses PMEA as well as its three deaza derivatives. Species written without a charge either do not carry one or represent the species in general (i.e., independent of their protonation degree); which of the two possibilities applies is always clear from the context. (1997)
    Weinheim : Wiley-Blackwell
    Chemistry - A European Journal 3 (1997), S. 1526-1536 
    ISSN: 0947-6539
    Keywords: adenine ; isomerizations ; NMR spectroscopy ; nucleotides ; stability constants ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The stability constants of the 1:1 complexes formed between Cu2+ and the anions of the N 1, N 3, and N 7 deaza derivatives of 9-[2-(phosphonomethoxy)-ethyl]adenine (PA2-), Cu(H;PA)+ and Cu(PA), were determined by potentiometric pH titration in aqueous solution (25 °C; I = 0.1 M, NaNO3) and compared with previous results for 9-[2-(phosphonomethoxy)ethyl]adenine (PMEA2-) and (phosphonomethoxy)ethane (PME2-). A microconstant scheme reveals that in Cu(H;PA)+ Cu2+ is coordinated to the nucleobase, H+ being at the phosphonate group, in about 90% of the Cu(H;PMEA)+ and Cu(H;1-deaza-PMEA)+ species, but only in about 37% and 12% of the corresponding complexes with H(3-deaza-PMEA)- and H(7-deaza-PMEA)-, respectively. Straight-line plots of log KCuCu(R-PO3) versus pKHH(R-PO3) for simple phosph(on)ate ligands show that all the Cu(PA) complexes, including those with PMEA2- and PME2-, are more stable than expected simply from the basicity of the -PO2- group; to some extent five-membered chelates (Cu(PA)cl/O) involving the ether oxygen of the -CH2-O-CH2-PO2-3 chain are formed, and in all complexes an additional nucleobase-metal-ion interaction occurs. Based on 1H NMR line-broadening measurements and structural considerations it is concluded that in Cu(3-deaza-PMEA) the interaction occurs with N7 whereas in Cu(7-deaza-PMEA), Cu(1-deaza-PMEA), and Cu(PMEA) it occurs with N3. The proof of a metal ion-N3 interaction is important (and also of relevance regarding DNA) because so far this interaction has received little attention. In all Cu(PA) systems three major isomeric species are in equilibrium; for example, 17(∓3)% of Cu(PMEA) exists as an isomer with a sole Cu2+-phosphonate coordination, 34(∓10)% as Cu(PMEA)cl/O, and in 49(∓10)% the Cu2+ is bound to the phosphonate group, the ether O, and N3. In contrast, 54(∓8)% of Cu(5′-AMP) occurs as an isomer with sole Cu2+-phosphate coordination and 46(∓8)% as a macrochelate involving N7 too.
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