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  • Climate change  (16)
  • Mixing  (14)
  • Antarctic bacterioplankton
  • John Wiley & Sons  (29)
  • Nature Publishing Group
  • American Institute of Physics (AIP)
  • 1
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    Climate change and functional traits affect population dynamics of a long‐lived seabird (2018)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Journal of Animal Ecology 87 (2018): 906-920, doi:10.1111/1365-2656.12827.
    Description: Recent studies unravelled the effect of climate changes on populations through their impact on functional traits and demographic rates in terrestrial and freshwater ecosystems, but such understanding in marine ecosystems remains incomplete. Here, we evaluate the impact of the combined effects of climate and functional traits on population dynamics of a long‐lived migratory seabird breeding in the southern ocean: the black‐browed albatross (Thalassarche melanophris, BBA). We address the following prospective question: “Of all the changes in the climate and functional traits, which would produce the biggest impact on the BBA population growth rate?” We develop a structured matrix population model that includes the effect of climate and functional traits on the complete BBA life cycle. A detailed sensitivity analysis is conducted to understand the main pathway by which climate and functional trait changes affect the population growth rate. The population growth rate of BBA is driven by the combined effects of climate over various seasons and multiple functional traits with carry‐over effects across seasons on demographic processes. Changes in sea surface temperature (SST) during late winter cause the biggest changes in the population growth rate, through their effect on juvenile survival. Adults appeared to respond to changes in winter climate conditions by adapting their migratory schedule rather than by modifying their at‐sea foraging activity. However, the sensitivity of the population growth rate to SST affecting BBA migratory schedule is small. BBA foraging activity during the pre‐breeding period has the biggest impact on population growth rate among functional traits. Finally, changes in SST during the breeding season have little effect on the population growth rate. These results highlight the importance of early life histories and carry‐over effects of climate and functional traits on demographic rates across multiple seasons in population response to climate change. Robust conclusions about the roles of various phases of the life cycle and functional traits in population response to climate change rely on an understanding of the relationships of traits to demographic rates across the complete life cycle.
    Description: NSF Grant Number: OPP‐1246407; European Research Council Advanced Grant Grant Numbers: ERC‐2012‐ADG_20120314, 322989
    Keywords: Birds ; Climate change ; Foraging behaviours ; Non‐breeding season ; Phenotypic traits ; Pre‐breeding season ; Timing of breeding ; Wing length
    Repository Name: Woods Hole Open Access Server
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  • 2
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    Turbulent mixing in a far‐field plume during the transition to upwelling conditions : microstructure observations from an AUV (2018)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2018. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 45 (2018): 9765-9773, doi:10.1029/2018GL078543.
    Description: A REMUS 600 autonomous underwater vehicle was used to measure turbulent mixing within the far‐field Chesapeake Bay plume during the transition to upwelling. Prior to the onset of upwelling, the plume was mixed by a combination of energetic downwelling winds and bottom‐generated shear resulting in a two‐layer plume structure. Estimates of turbulent dissipation and buoyancy flux from a nose‐mounted microstructure system indicate that scalar exchange within the plume was patchy and transient, with direct wind mixing constrained to the near surface by stratification within the plume. Changing wind and tide conditions contributed to temporal variability. Following the separation of the upper plume from the coast, alongshore shear became a significant driver of mixing on the shoreward edge of the plume.
    Description: NSF Grant Numbers: OCE‐1334231, OCE‐1745258, OCE‐1334398
    Description: 2019-03-23
    Keywords: River plume ; Upwelling ; Turbulence ; Autonomous underwater vehicle ; Mixing
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  • 3
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    Climate change and the threat of novel marine predators in Antarctica (2018)
    John Wiley & Sons
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    Publication Date: 2022-05-26
    Description: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ecosphere 8 (2017): 10.1002/ecs2.2017, doi:10.1002/ecs2.2017.
    Description: Historically low temperatures have severely limited skeleton-breaking predation on the Antarctic shelf, facilitating the evolution of a benthic fauna poorly defended against durophagy. Now, rapid warming of the Southern Ocean is restructuring Antarctic marine ecosystems as conditions become favorable for range expansions. Populations of the lithodid crab Paralomis birsteini currently inhabit some areas of the continental slope off Antarctica. They could potentially expand along the slope and upward to the outer continental shelf, where temperatures are no longer prohibitively low. We identified two sites inhabited by different densities of lithodids in the slope environment along the western Antarctic Peninsula. Analysis of the gut contents of P. birsteini trapped on the slope revealed them to be opportunistic invertivores. The abundances of three commonly eaten, eurybathic taxa—ophiuroids, echinoids, and gastropods—were negatively associated with P. birsteini off Marguerite Bay, where lithodid densities averaged 4280 ind/km2 at depths of 1100–1499 m (range 3440–5010 ind/km2), but not off Anvers Island, where lithodid densities were lower, averaging 2060 ind/km2 at these depths (range 660–3270 ind/km2). Higher abundances of lithodids appear to exert a negative effect on invertebrate distribution on the slope. Lateral or vertical range expansions of P. birsteini at sufficient densities could substantially reduce populations of their benthic prey off Antarctica, potentially exacerbating the direct impacts of rising temperatures on the distribution and diversity of the contemporary shelf benthos.
    Description: Division of Polar Programs Grant Numbers: ANT-0838466, ANT-0838844, ANT-1141877, ANT-1141896; Vetenskapsrådet Grant Number: 824-2008-6429; H2020 Marie Skłodowska-Curie Actions Grant Number: 704895; U.S. National Science Foundation; European Commission; University of Alabama at Birmingham
    Keywords: Antarctica ; Bathyal ; Benthic ; Climate change ; Echinoidea ; Lithodidae ; Ophiuroidea ; Paralomis ; Polar emergence ; Predation
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  • 4
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    Implications of future northwest Atlantic bottom temperatures on the American lobster (Homarus americanus) fishery (2018)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Journal of Geophysical Research: Oceans 122 (2017): 9387–9398, doi:10.1002/2017JC012949.
    Description: Sea surface temperatures of the northwest Atlantic have warmed dramatically over the last several decades, while benthic temperatures have increased at a slower pace. Here we analyze a subset of the CMIP5 global Earth system model ensemble using a statistical downscaling approach to determine potential future changes in benthic temperatures on the northwest Atlantic continental shelf and slope (〈500 m). We put future changes in the context of possible impacts of ocean warming on the high-value, wild-caught American Lobster (Homarus americanus) fishery. Future bottom temperatures of the northwest Atlantic under a business-as-usual (RCP8.5) and a climate-policy (RCP4.5) scenario are projected to increase by 0–1.5°C and 1.2–2.4°C by 2050 and 0–1.9°C and 2.3–4.3°C by the end of the century for RCP4.5 and RCP8.5, respectively. H. americanus experiences thermal stress at temperatures above 20°C, and projected increases in temperature is likely to result in changes in the distribution of optimal thermal egg hatching and settlement indicators. Inshore regions of southern New England, where H. americanus biomass and catch have been declining historically, will likely become inhospitable under either future scenario, while thermal egg hatching and settlement indicators will expand offshore and in the Gulf of Maine. These changes imply that members of the fishery based in southern New England may need to recapitalize to larger vessels to prepare for potential changes brought on by future climate warming. Results from the downscaling presented here can be useful in preparing for potential changes to other fisheries or in future climate vulnerability analyses.
    Description: John D. and Catherine T. MacArthur Foundation Grant Number: 14-106159-000-CFP; NASA Grant Number: NNX14AP62A; “National Marine Sanctuaries as Sentinel Sites for a Demonstration Marine Biodiversity Observation Network (MBON)”; National Ocean Partnership Program Grant Number: NOPP RFP NOAA-NOS IOOS-2014-2003803; NOAA Integrated Ocean Observing System (IOOS) Program Office
    Keywords: Benthic temperature ; Climate change ; Warming ; American Lobster
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  • 5
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    Thirty-three years of ocean benthic warming along the U.S. Northeast Continental Shelf and Slope : patterns, drivers, and ecological consequences (2018)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Journal of Geophysical Research: Oceans 122 (2017): 9399–9414, doi:10.1002/2017JC012953.
    Description: The U.S. Northeast Continental Shelf is experiencing rapid warming, with potentially profound consequences to marine ecosystems. While satellites document multiple scales of spatial and temporal variability on the surface, our understanding of the status, trends, and drivers of the benthic environmental change remains limited. We interpolated sparse benthic temperature data along the New England Shelf and upper Slope using a seasonally dynamic, regionally specific multiple linear regression model that merged in situ and remote sensing data. The statistical model predicted nearly 90% of the variability of the data, resulting in a synoptic time series spanning over three decades from 1982 to 2014. Benthic temperatures increased throughout the domain, including in the Gulf of Maine. Rates of benthic warming ranged from 0.1 to 0.4°C per decade, with fastest rates occurring in shallow, nearshore regions and on Georges Bank, the latter exceeding rates observed in the surface. Rates of benthic warming were up to 1.6 times faster in winter than the rest of the year in many regions, with important implications for disease occurrence and energetics of overwintering species. Drivers of warming varied over the domain. In southern New England and the mid-Atlantic shallow Shelf regions, benthic warming was tightly coupled to changes in SST, whereas both regional and basin-scale changes in ocean circulation affect temperatures in the Gulf of Maine, the Continental Shelf, and Georges Banks. These results highlight data gaps, the current feasibility of prediction from remotely sensed variables, and the need for improved understanding on how climate may affect seasonally specific ecological processes.
    Description: John D. and Catherine T. MacArthur Foundation Grant Number: 14–106159-000-CFP; National Aeronautics and Space Administration Grant Number: NNX14AP62A
    Keywords: Benthic habitat ; New England ; Warming ; Climate change ; Satellite remote sensing
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  • 6
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    A gradient of nutrient enrichment reveals nonlinear impacts of fertilization on Arctic plant diversity and ecosystem function (2017)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Ecology and Evolution 7 (2017): 2449–2460, doi:10.1002/ece3.2863.
    Description: Rapid environmental change at high latitudes is predicted to greatly alter the diversity, structure, and function of plant communities, resulting in changes in the pools and fluxes of nutrients. In Arctic tundra, increased nitrogen (N) and phosphorus (P) availability accompanying warming is known to impact plant diversity and ecosystem function; however, to date, most studies examining Arctic nutrient enrichment focus on the impact of relatively large (〉25x estimated naturally occurring N enrichment) doses of nutrients on plant community composition and net primary productivity. To understand the impacts of Arctic nutrient enrichment, we examined plant community composition and the capacity for ecosystem function (net ecosystem exchange, ecosystem respiration, and gross primary production) across a gradient of experimental N and P addition expected to more closely approximate warming-induced fertilization. In addition, we compared our measured ecosystem CO2 flux data to a widely used Arctic ecosystem exchange model to investigate the ability to predict the capacity for CO2 exchange with nutrient addition. We observed declines in abundance-weighted plant diversity at low levels of nutrient enrichment, but species richness and the capacity for ecosystem carbon uptake did not change until the highest level of fertilization. When we compared our measured data to the model, we found that the model explained roughly 30%–50% of the variance in the observed data, depending on the flux variable, and the relationship weakened at high levels of enrichment. Our results suggest that while a relatively small amount of nutrient enrichment impacts plant diversity, only relatively large levels of fertilization—over an order of magnitude or more than warming-induced rates—significantly alter the capacity for tundra CO2 exchange. Overall, our findings highlight the value of measuring and modeling the impacts of a nutrient enrichment gradient, as warming-related nutrient availability may impact ecosystems differently than single-level fertilization experiments.
    Description: NASA Terrestrial Ecology Grant Number: NNX12AK83G; National Science Foundation Division of Graduate Education Grant Number: DGE-11-44155
    Keywords: Arctic ; Climate change ; Ecosystem function ; Ecosystem respiration ; Gross primary productivity ; Net ecosystem ; CO2 exchange ; Plant diversity
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  • 7
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    Circumpolar analysis of the Adélie Penguin reveals the importance of environmental variability in phenological mismatch (2017)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Ecological Society of America, 2017. This article is posted here by permission of Ecological Society of America for personal use, not for redistribution. The definitive version was published in Ecology 98 (2017): 940-951, doi:10.1002/ecy.1749.
    Description: Evidence of climate-change-driven shifts in plant and animal phenology have raised concerns that certain trophic interactions may be increasingly mismatched in time, resulting in declines in reproductive success. Given the constraints imposed by extreme seasonality at high latitudes and the rapid shifts in phenology seen in the Arctic, we would also expect Antarctic species to be highly vulnerable to climate-change-driven phenological mismatches with their environment. However, few studies have assessed the impacts of phenological change in Antarctica. Using the largest database of phytoplankton phenology, sea-ice phenology, and Adélie Penguin breeding phenology and breeding success assembled to date, we find that, while a temporal match between Penguin breeding phenology and optimal environmental conditions sets an upper limit on breeding success, only a weak relationship to the mean exists. Despite previous work suggesting that divergent trends in Adélie Penguin breeding phenology are apparent across the Antarctic continent, we find no such trends. Furthermore, we find no trend in the magnitude of phenological mismatch, suggesting that mismatch is driven by interannual variability in environmental conditions rather than climate-change-driven trends, as observed in other systems. We propose several criteria necessary for a species to experience a strong climate-change-driven phenological mismatch, of which several may be violated by this system.
    Description: Funding to H. J. Lynch and C. Youngflesh was provided by the National Science Foundation Grant OPP/GSS 1255058, to S. Jenouvrier, H. J. Lynch, C. Youngflesh, Y. Li, and R. Ji by the National Science Foundation Grant 1341474, to S. Jenouvrier, Y. Li, and R. Ji by NASA grant NNX14AH74G, to D. G. Ainley, G. Ballard, and K. M. Dugger by the National Science Foundation Grants OPP 9526865, 9814882, 0125608, 0944411 and 0440643, to P. O’B. Lyver by New Zealand’s Ministry of Business, Innovation, and Employment Grants C09X0510 and C01X1001, and Ministry of Primary Industry grants with logistic support from Antarctica New Zealand.
    Keywords: Anna Karenina Principle ; Antarctica ; Asynchrony ; Bayesian hierarchical model ; Climate change ; Phenology ; Pygoscelis adeliae ; Quantile regression
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  • 8
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    Hydraulics and mixing in a laterally divergent channel of a highly stratified estuary (2017)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2017. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 122 (2017): 4743–4760, doi:10.1002/2016JC012455.
    Description: Estuarine mixing is often intensified in regions where topographic forcing leads to hydraulic transitions. Observations in the salt-wedge estuary of the Connecticut River indicate that intense mixing occurs during the ebb tide in regions of supercritical flow that is accelerated by lateral expansion of the channel. The zones of mixing are readily identifiable based on echo-sounding images of large-amplitude shear instabilities. The gradient Richardson number (Ri) averaged across the mixing layer decreases to a value very close to 0.25 during most of the active mixing phase. The along-estuary variation in internal Froude number and interface elevation are roughly consistent with a steady, inviscid, two-layer hydraulic representation, and the fit is improved when a parameterization for interfacial stress is included. The analysis indicates that the mixing results from lateral straining of the shear layer, and that the rapid development of instabilities maintains the overall flow near the mixing threshold value of Ri = 0.25, even with continuous, active mixing. The entrainment coefficient can be estimated from salt conservation within the interfacial layer, based on the finding that the mixing maintains Ri = 0.25. This approach leads to a scaling estimate for the interfacial mixing coefficient based on the lateral spreading rate and the aspect ratio of the flow, yielding estimates of turbulent dissipation within the pycnocline that are consistent with estimates based on turbulence-resolving measurements.
    Description: NSF Grant Number: OCE 0926427; Devonshire Scholars program
    Description: 2017-12-12
    Keywords: Internal hydraulics ; Mixing ; Gradient Richardson number ; Estuary
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  • 9
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    Subsea ice-bearing permafrost on the U.S. Beaufort Margin : 2. Borehole constraints (2017)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry, Geophysics, Geosystems 17 (2016): 4333–4353, doi:10.1002/2016GC006582.
    Description: Borehole logging data from legacy wells directly constrain the contemporary distribution of subsea permafrost in the sedimentary section at discrete locations on the U.S. Beaufort Margin and complement recent regional analyses of exploration seismic data to delineate the permafrost's offshore extent. Most usable borehole data were acquired on a ∼500 km stretch of the margin and within 30 km of the contemporary coastline from north of Lake Teshekpuk to nearly the U.S.-Canada border. Relying primarily on deep resistivity logs that should be largely unaffected by drilling fluids and hole conditions, the analysis reveals the persistence of several hundred vertical meters of ice-bonded permafrost in nearshore wells near Prudhoe Bay and Foggy Island Bay, with less permafrost detected to the east and west. Permafrost is inferred beneath many barrier islands and in some nearshore and lagoonal (back-barrier) wells. The analysis of borehole logs confirms the offshore pattern of ice-bearing subsea permafrost distribution determined based on regional seismic analyses and reveals that ice content generally diminishes with distance from the coastline. Lacking better well distribution, it is not possible to determine the absolute seaward extent of ice-bearing permafrost, nor the distribution of permafrost beneath the present-day continental shelf at the end of the Pleistocene. However, the recovery of gas hydrate from an outer shelf well (Belcher) and previous delineation of a log signature possibly indicating gas hydrate in an inner shelf well (Hammerhead 2) imply that permafrost may once have extended across much of the shelf offshore Camden Bay.
    Description: 2017-05-04
    Keywords: Permafrost ; Arctic Ocean ; Climate change ; Borehole logging ; Gas hydrates
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  • 10
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    Interactions between land use change and carbon cycle feedbacks (2017)
    John Wiley & Sons
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    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2017. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 31 (2017): 96–113, doi:10.1002/2016GB005374.
    Description: Using the Community Earth System Model, we explore the role of human land use and land cover change (LULCC) in modifying the terrestrial carbon budget in simulations forced by Representative Concentration Pathway 8.5, extended to year 2300. Overall, conversion of land (e.g., from forest to croplands via deforestation) results in a model-estimated, cumulative carbon loss of 490 Pg C between 1850 and 2300, larger than the 230 Pg C loss of carbon caused by climate change over this same interval. The LULCC carbon loss is a combination of a direct loss at the time of conversion and an indirect loss from the reduction of potential terrestrial carbon sinks. Approximately 40% of the carbon loss associated with LULCC in the simulations arises from direct human modification of the land surface; the remaining 60% is an indirect consequence of the loss of potential natural carbon sinks. Because of the multicentury carbon cycle legacy of current land use decisions, a globally averaged amplification factor of 2.6 must be applied to 2015 land use carbon losses to adjust for indirect effects. This estimate is 30% higher when considering the carbon cycle evolution after 2100. Most of the terrestrial uptake of anthropogenic carbon in the model occurs from the influence of rising atmospheric CO2 on photosynthesis in trees, and thus, model-projected carbon feedbacks are especially sensitive to deforestation.
    Description: National Science Foundation Grant Numbers: AGS 1049033, CCF-1522054
    Description: 2017-07-23
    Keywords: Carbon cycle ; Climate change ; Land use and land cover change ; Earth system models
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  • 11
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    Global ocean vertical velocity from a dynamically consistent ocean state estimate (2017)
    John Wiley & Sons
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    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2017. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 122 (2017): 8208–8224, doi:10.1002/2017JC012985.
    Description: Estimates of the global ocean vertical velocities (Eulerian, eddy-induced, and residual) from a dynamically consistent and data-constrained ocean state estimate are presented and analyzed. Conventional patterns of vertical velocity, Ekman pumping, appear in the upper ocean, with topographic dominance at depth. Intense and vertically coherent upwelling and downwelling occur in the Southern Ocean, which are likely due to the interaction of the Antarctic Circumpolar Current and large-scale topographic features and are generally canceled out in the conventional zonally averaged results. These “elevators” at high latitudes connect the upper to the deep and abyssal oceans and working together with isopycnal mixing are likely a mechanism, in addition to the formation of deep and abyssal waters, for fast responses of the deep and abyssal oceans to the changing climate. Also, Eulerian and parameterized eddy-induced components are of opposite signs in numerous regions around the global ocean, particularly in the ocean interior away from surface and bottom. Nevertheless, residual vertical velocity is primarily determined by the Eulerian component, and related to winds and large-scale topographic features. The current estimates of vertical velocities can serve as a useful reference for investigating the vertical exchange of ocean properties and tracers, and its complex spatial structure ultimately permits regional tests of basic oceanographic concepts such as Sverdrup balance and coastal upwelling/downwelling.
    Description: National Science Foundation Grant Numbers: OCE-1736633 , OCE-1534618 , OCE-0961713; National Oceanic and Atmospheric Administration Grant Number: NA10OAR4310135
    Description: 2018-04-27
    Keywords: Vertical velocity ; Vertical transport ; Vertical exchange ; Ocean state estimate ; Climate change ; Southern Ocean
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  • 12
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    Mixing of dissolved oxygen in Chesapeake Bay driven by the interaction between wind-driven circulation and estuarine bathymetry (2016)
    John Wiley & Sons
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    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 5639–5654, doi:10.1002/2016JC011924.
    Description: Field observations collected in Chesapeake Bay demonstrate how wind-driven circulation interacts with estuarine bathymetry to control when and where the vertical mixing of dissolved oxygen occurs. In the across-Bay direction, the lateral Ekman response to along-Bay wind forcing contributes to the vertical mixing of dissolved oxygen in two ways. First, the lateral tilting of the pycnocline/oxycline, consistent with the thermal wind relationship, advects the region of high vertical gradient into the surface and bottom boundary layers where mixing can occur. Second, upwelling of low-oxygen water to the surface enhances the atmospheric influx. In the along-Bay direction, the abrupt change in bottom depth associated with Rappahannock Shoal results in surface convergence and downwelling, leading to localized vertical mixing. Water that is mixed on the shoal is entrained into the up-Bay residual bottom flow resulting in increases in bottom dissolved oxygen that propagate up the system. The increases in dissolved oxygen are often associated with increases in temperature and decreases in salinity, consistent with vertical mixing. However, the lagged arrival moving northward suggests that the propagation of this signal up the Bay is due to advection.
    Description: National Science Foundation Grant Number: OCE-1338518
    Description: 2017-02-08
    Keywords: Mixing ; Hypoxia ; Chesapeake Bay
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  • 13
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    Internal lee wave closures : parameter sensitivity and comparison to observations (2016)
    John Wiley & Sons
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    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 120 (2015): 7997–8019, doi:10.1002/2015JC010892.
    Description: This paper examines two internal lee wave closures that have been used together with ocean models to predict the time-averaged global energy conversion rate into lee waves and dissipation rate associated with lee waves and topographic blocking: the Garner (2005) scheme and the Bell (1975) theory. The closure predictions in two Southern Ocean regions where geostrophic flows dominate over tides are examined and compared to microstructure profiler observations of the turbulent kinetic energy dissipation rate, where the latter are assumed to reflect the dissipation associated with topographic blocking and generated lee wave energy. It is shown that when applied to these Southern Ocean regions, the two closures differ most in their treatment of topographic blocking. For several reasons, pointwise validation of the closures is not possible using existing observations, but horizontally averaged comparisons between closure predictions and observations are made. When anisotropy of the underlying topography is accounted for, the two horizontally averaged closure predictions near the seafloor are approximately equal. The dissipation associated with topographic blocking is predicted by the Garner (2005) scheme to account for the majority of the depth-integrated dissipation over the bottom 1000 m of the water column, where the horizontally averaged predictions lie well within the spatial variability of the horizontally averaged observations. Simplifications made by the Garner (2005) scheme that are inappropriate for the oceanic context, together with imperfect observational information, can partially account for the prediction-observation disagreement, particularly in the upper water column.
    Description: National Science Foundation Grant Number: OCE-0960820; Office of Naval Research (ONR) Grant Number: N00014-11-1-0487; Australian Research Council Grant Number: (DE120102927 and CE110001028); National Science and Engineering Research Council of Canada Grant Number: (22R23085)
    Description: 2016-06-17
    Keywords: Mixing ; Dissipation ; Finestructure ; Internal waves ; Topographic interactions ; Microstructure
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  • 14
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    Spring plankton dynamics in the Eastern Bering Sea, 1971–2050 : mechanisms of interannual variability diagnosed with a numerical model (2016)
    John Wiley & Sons
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    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 1476–1501, doi:10.1002/2015JC011449.
    Description: A new planktonic ecosystem model was constructed for the Eastern Bering Sea based on observations from the 2007–2010 BEST/BSIERP (Bering Ecosystem Study/Bering Sea Integrated Ecosystem Research Program) field program. When run with forcing from a data-assimilative ice-ocean hindcast of 1971–2012, the model performs well against observations of spring bloom time evolution (phytoplankton and microzooplankton biomass, growth and grazing rates, and ratios among new, regenerated, and export production). On the southern middle shelf (57°N, station M2), the model replicates the generally inverse relationship between ice-retreat timing and spring bloom timing known from observations, and the simpler direct relationship between the two that has been observed on the northern middle shelf (62°N, station M8). The relationship between simulated mean primary production and mean temperature in spring (15 February to 15 July) is generally positive, although this was found to be an indirect relationship which does not continue to apply across a future projection of temperature and ice cover in the 2040s. At M2, the leading direct controls on total spring primary production are found to be advective and turbulent nutrient supply, suggesting that mesoscale, wind-driven processes—advective transport and storminess—may be crucial to long-term trends in spring primary production in the southeastern Bering Sea, with temperature and ice cover playing only indirect roles. Sensitivity experiments suggest that direct dependence of planktonic growth and metabolic rates on temperature is less significant overall than the other drivers correlated with temperature described above.
    Description: This work was supported by the National Science Foundation through grants ARC-1107187, ARC-1107303, and ARC-1107588, for BEST Synthesis, and PLR-1417365.
    Description: 2016-08-20
    Keywords: Phytoplankton bloom ; Climate change ; Bering Sea ; Microzooplankton ; Ecosystem model ; Phenology
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    Dispersion of a tracer in the deep Gulf of Mexico (2016)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 1110–1132, doi:10.1002/2015JC011405.
    Description: A 25 km streak of CF3SF5 was released on an isopycnal surface approximately 1100 m deep, and 150 m above the bottom, along the continental slope of the northern Gulf of Mexico, to study stirring and mixing of a passive tracer. The location and depth of the release were near those of the deep hydrocarbon plume resulting from the 2010 Deepwater Horizon oil well rupture. The tracer was sampled between 5 and 12 days after release, and again 4 and 12 months after release. The tracer moved along the slope at first but gradually moved into the interior of the Gulf. Diapycnal spreading of the patch during the first 4 months was much faster than it was between 4 and 12 months, indicating that mixing was greatly enhanced over the slope. The rate of lateral homogenization of the tracer was much greater than observed in similar experiments in the open ocean, again possibly enhanced near the slope. Maximum concentrations found in the surveys had fallen by factors of 104, 107, and 108, at 1 week, 4 months, and 12 months, respectively, compared with those estimated for the initial tracer streak. A regional ocean model was used to simulate the tracer field and help interpret its dispersion and temporal evolution. Model-data comparisons show that the model simulation was able to replicate statistics of the observed tracer distribution that would be important in assessing the impact of oil releases in the middepth Gulf.
    Description: This research was made possible by a grant from The Gulf of Mexico Research Initiative.
    Description: 2016-08-05
    Keywords: Mixing ; Tracer ; Gulf of Mexico ; Turbulence ; Circulation
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    Early ice retreat and ocean warming may induce copepod biogeographic boundary shifts in the Arctic Ocean (2016)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2016. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 121 (2016): 6137-6158, doi:10.1002/2016JC011784.
    Description: Early ice retreat and ocean warming are changing various facets of the Arctic marine ecosystem, including the biogeographic distribution of marine organisms. Here an endemic copepod species, Calanus glacialis, was used as a model organism, to understand how and why Arctic marine environmental changes may induce biogeographic boundary shifts. A copepod individual-based model was coupled to an ice-ocean-ecosystem model to simulate temperature- and food-dependent copepod life history development. Numerical experiments were conducted for two contrasting years: a relatively cold and normal sea ice year (2001) and a well-known warm year with early ice retreat (2007). Model results agreed with commonly known biogeographic distributions of C. glacialis, which is a shelf/slope species and cannot colonize the vast majority of the central Arctic basins. Individuals along the northern boundaries of this species' distribution were most susceptible to reproduction timing and early food availability (released sea ice algae). In the Beaufort, Chukchi, East Siberian, and Laptev Seas where severe ocean warming and loss of sea ice occurred in summer 2007, relatively early ice retreat, elevated ocean temperature (about 1–2°C higher than 2001), increased phytoplankton food, and prolonged growth season created favorable conditions for C. glacialis development and caused a remarkable poleward expansion of its distribution. From a pan-Arctic perspective, despite the great heterogeneity in the temperature and food regimes, common biogeographic zones were identified from model simulations, thus allowing a better characterization of habitats and prediction of potential future biogeographic boundary shifts.
    Description: National Science Foundation Polar Programs Grant Number: (PLR-1417677, PLR-1417339, and PLR-1416920)
    Description: 2017-02-20
    Keywords: Arctic Ocean ; Marine ecosystem ; Climate change ; Biogeography ; Individual-based model ; C. glacialis
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    Boundary mixing in Orkney Passage outflow (2015)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2014. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 119 (2014): 8627–8645, doi:10.1002/2014JC010099.
    Description: One of the most remarkable features of contemporary oceanic climate change is the warming and contraction of Antarctic Bottom Water over much of global ocean abyss. These signatures represent changes in ventilation mediated by mixing and entrainment processes that may be location-specific. Here we use available data to document, as best possible, those mixing processes as Weddell Sea Deep and Bottom Waters flow along the South Orkney Plateau, exit the Weddell Sea via Orkney Passage and fill the abyssal Scotia Sea. First, we find that an abrupt transition in topography upstream of Orkney Passage delimits the extent of the coldest waters along the Plateau's flanks and may indicate a region of especially intense mixing. Second, we revisit a control volume budget by Heywood et al. (2002) for waters trapped within the Scotia Sea after entering through Orkney Passage. This budget requires extremely vigorous water mass transformations with a diapycnal transfer coefficient of inline image m2 s−1. Evidence for such intense diapycnal mixing is not found in the abyssal Scotia Sea interior and, while we do find large rates of diapycnal mixing in conjunction with a downwelling Ekman layer on the western side of Orkney Passage, it is insufficient to close the budget. This leads us to hypothesize that the Heywood budget is closed by a boundary mixing process in which the Ekman layer associated with the Weddell Sea Deep Water boundary current experiences relatively large vertical scale overturning associated with tidal forcing along the southern boundary of the Scotia Sea.
    Description: KLP gratefully acknowledges salary support from Woods Hole Oceanographic Institution bridge support funds. ACNG acknowledges the support of a Philip Leverhulme Prize. LJ and MPM were supported by the ANDREX project, funded by the U.K. National Environment Research Council (NE/E01366X/1).
    Description: 2015-06-16
    Keywords: Mixing ; Transport ; Control volume
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    Surfzone to inner-shelf exchange estimated from dye tracer balances (2015)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 120 (2015): 6289–6308, doi:10.1002/2015JC010844.
    Description: Surfzone and inner-shelf tracer dispersion are observed at an approximately alongshore-uniform beach. Fluorescent Rhodamine WT dye, released near the shoreline continuously for 6.5 h, is advected alongshore by breaking-wave- and wind-driven currents, and ejected offshore from the surfzone to the inner-shelf by transient rip currents. Novel aerial-based multispectral dye concentration images and in situ measurements of dye, waves, and currents provide tracer transport and dilution observations spanning about 350 m cross-shore and 3 km alongshore. Downstream dilution of near-shoreline dye follows power law decay with exponent −0.33, implying that a tenfold increase in alongshore distance reduces the concentration about 50%. Coupled surfzone and inner-shelf dye mass balances close, and in 5 h, roughly half of the surfzone-released dye is transported offshore to the inner-shelf. Observed cross-shore transports are parameterized well ( inline image, best fit slope inline image) using a bulk exchange velocity and mean surfzone to inner-shelf dye concentration difference. The best fit cross-shore exchange velocity inline image is similar to a temperature-derived exchange velocity on another day with similar wave conditions. The inline image magnitude and observed inner-shelf dye length scales, time scales, and vertical structure indicate the dominance of transient rip currents in surfzone to inner-shelf cross-shore exchange during moderate waves at this alongshore-uniform beach.
    Description: National Science Foundation Graduate Research Fellowship Grant Number: DGE1144086, California Sea Grant Number: R/CONT-207TR
    Description: 2016-03-19
    Keywords: Surfzone ; Inner-shelf ; Tracer ; Cross-shore transport ; Mixing ; Pollution
    Repository Name: Woods Hole Open Access Server
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    Wave breaking turbulence at the offshore front of the Columbia River Plume (2015)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2014. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Geophysical Research Letters 41 (2014): 8987–8993, doi:10.1002/2014GL062274.
    Description: Observations at the Columbia River plume show that wave breaking is an important source of turbulence at the offshore front, which may contribute to plume mixing. The lateral gradient of current associated with the plume front is sufficient to block (and break) shorter waves. The intense whitecapping that then occurs at the front is a significant source of turbulence, which diffuses downward from the surface according to a scaling determined by the wave height and the gradient of wave energy flux. This process is distinct from the shear-driven mixing that occurs at the interface of river water and ocean water. Observations with and without short waves are examined, especially in two cases in which the background conditions (i.e., tidal flows and river discharge) are otherwise identical.
    Description: This work was supported by the Office of Naval Research, as part of the Data Assimilation and Remote Sensing for Littoral Applications (DARLA) project and in coordination with the Rivers and Inlets (RIVET) program.
    Keywords: Wave breaking ; Turbulence ; Mixing ; Wave-current interaction ; River plume
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    Climate forcing of unprecedented intense-hurricane activity in the last 2000 years (2015)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Earth's Future 3 (2015): 49–65, doi:10.1002/2014EF000274.
    Description: How climate controls hurricane variability has critical implications for society is not well understood. In part, our understanding is hampered by the short and incomplete observational hurricane record. Here we present a synthesis of intense-hurricane activity from the western North Atlantic over the past two millennia, which is supported by a new, exceptionally well-resolved record from Salt Pond, Massachusetts (USA). At Salt Pond, three coarse grained event beds deposited in the historical interval are consistent with severe hurricanes in 1991 (Bob), 1675, and 1635 C.E., and provide modern analogs for 32 other prehistoric event beds. Two intervals of heightened frequency of event bed deposition between 1400 and 1675 C.E. (10 events) and 150 and 1150 C.E. (23 events), represent the local expression of coherent regional patterns in intense-hurricane–induced event beds. Our synthesis indicates that much of the western North Atlantic appears to have been active between 250 and 1150 C.E., with high levels of activity persisting in the Caribbean and Gulf of Mexico until 1400 C.E. This interval was one with relatively warm sea surface temperatures (SSTs) in the main development region (MDR). A shift in activity to the North American east coast occurred ca. 1400 C.E., with more frequent severe hurricane strikes recorded from The Bahamas to New England between 1400 and 1675 C.E. A warm SST anomaly along the western North Atlantic, rather than within the MDR, likely contributed to the later active interval being restricted to the east coast.
    Description: Funding was provided by US National Science Foundation (awards 0903020 and 1356708), the Risk Prediction Initiative at the Bermuda Institute for Ocean Sciences (BIOS), US Department of Energy National Institute for Climate Change Research, National Oceanic and Atmospheric Administration (award NA11OAR431010), and the Dalio Explore Fund.
    Keywords: Tropical cyclones ; Climate change ; Holocene ; Common era ; Sea surface temperature
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    The role of atmospheric forcing versus ocean advection during the extreme warming of the Northeast U.S. continental shelf in 2012 (2015)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 120 (2015): 4324–4339, doi:10.1002/2014JC010547.
    Description: In the coastal ocean off the Northeast U.S., the sea surface temperature (SST) in the first half of 2012 was the highest on the record for the past roughly 150 years of recorded observations. The underlying dynamical processes responsible for this extreme event are examined using a numerical model, and the relative contributions of air-sea heat flux versus lateral ocean advective heat flux are quantified. The model accurately reproduces the observed vertical structure and the spatiotemporal characteristics of the thermohaline condition of the Gulf of Maine and the Middle Atlantic Bight waters during the anomalous warming period. Analysis of the model results show that the warming event was primarily driven by the anomalous air-sea heat flux, while the smaller contribution by the ocean advection worked against this flux by acting to cool the shelf. The anomalous air-sea heat flux exhibited a shelf-wide coherence, consistent with the shelf-wide warming pattern, while the ocean advective heat flux was dominated by localized, relatively smaller-scale processes. The anomalous cooling due to advection primarily resulted from the along-shelf heat flux divergence in the Gulf of Maine, while in the Middle Atlantic Bight the advective contribution from the along-shelf and cross-shelf heat flux divergences was comparable. The modeling results confirm the conclusion of the recent analysis of in situ data by Chen et al. (2014a) that the changes in the large-scale atmospheric circulation in the winter of 2011–2012 primarily caused the extreme warm anomaly in the spring of 2012. The effect of along-shelf or cross-shelf ocean advection on the warm anomalies from either the Scotian Shelf or adjacent continental slope was secondary.
    Description: K.C. was supported by the Woods Hole Oceanographic Institution Postdoctoral Scholar program, the Coastal Ocean Institute, and the National Science Foundation (NSF) under grant OCE-1435602. G.G.G. was supported by NSF grants OCE-1435602 and OCE-1129125. Y.-O.K. was supported by the NSF grant OCE-1435602. W.G.Z. was supported by the NSF grant OCE-1129125.
    Description: 2015-12-15
    Keywords: Extreme temperature ; Heat budget ; Northeast U.S. coastal ocean ; Numerical modeling ; Air-sea interaction ; Climate change
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    Vertical kinetic energy and turbulent dissipation in the ocean (2015)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Geophysical Research Letters 42 (2015): 7639–7647, doi:10.1002/2015GL065043.
    Description: Oceanic internal waves are closely linked to turbulence. Here a relationship between vertical wave number (kz) spectra of fine-scale vertical kinetic energy (VKE) and turbulent dissipation ε is presented using more than 250 joint profiles from five diverse dynamic regimes, spanning latitudes between the equator and 60°. In the majority of the spectra VKE varies as inline image. Scaling VKE with inline image collapses the off-equatorial spectra to within inline image but underestimates the equatorial spectrum. The simple empirical relationship between VKE and ε fits the data better than a common shear-and-strain fine-scale parameterization, which significantly underestimates ε in the two data sets that are least consistent with the Garrett-Munk (GM) model. The new relationship between fine-scale VKE and dissipation rate can be interpreted as an alternative, single-parameter scaling for turbulent dissipation in terms of fine-scale internal wave vertical velocity that requires no reference to the GM model spectrum.
    Description: National Science Foundation Grant Numbers: OCE-0728766, OCE-0425361, OCE-0424953, OCE-1029722, OCE-0622630, OCE-1030309, OCE-1232962, and Office of Naval Research Grant Number: N00014-10-10315
    Keywords: Internal waves ; Turbulence ; Mixing ; Vertical kinetic energy ; Finestructure parameterization
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    Modification of turbulent dissipation rates by a deep Southern Ocean eddy (2015)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 42 (2015): 3450–3457, doi:10.1002/2015GL063216.
    Description: The impact of a mesoscale eddy on the magnitude and spatial distribution of diapycnal ocean mixing is investigated using a set of hydrographic and microstructure measurements collected in the Southern Ocean. These data sampled a baroclinic, middepth eddy formed during the disintegration of a deep boundary current. Turbulent dissipation is suppressed within the eddy but is elevated by up to an order of magnitude along the upper and lower eddy boundaries. A ray tracing approximation is employed as a heuristic device to elucidate how the internal wave field evolves in the ambient velocity and stratification conditions accompanying the eddy. These calculations are consistent with the observations, suggesting reflection of internal wave energy from the eddy center and enhanced breaking through critical layer processes along the eddy boundaries. These results have important implications for understanding where and how internal wave energy is dissipated in the presence of energetic deep geostrophic flows.
    Description: Natural Environment Research Council (NERC). Grant Numbers: NE/E007058/1, NE/E005667/1; U.S. National Science Foundation. Grant Numbers: OCE-1231803, OCE-0927583, OCE-1030309; NERC
    Description: 2015-11-07
    Keywords: Mixing ; Eddy ; Turbulent dissipation ; Internal waves ; Southern Ocean ; Ray tracing
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    Climate modulates internal wave activity in the Northern South China Sea (2015)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 42 (2015): 831–838, doi:10.1002/2014GL062522.
    Description: Internal waves (IWs) generated in the Luzon Strait propagate into the Northern South China Sea (NSCS), enhancing biological productivity and affecting coral reefs by modulating nutrient concentrations and temperature. Here we use a state-of-the-art ocean data assimilation system to reconstruct water column stratification in the Luzon Strait as a proxy for IW activity in the NSCS and diagnose mechanisms for its variability. Interannual variability of stratification is driven by intrusions of the Kuroshio Current into the Luzon Strait and freshwater fluxes associated with the El Niño–Southern Oscillation. Warming in the upper 100 m of the ocean caused a trend of increasing IW activity since 1900, consistent with global climate model experiments that show stratification in the Luzon Strait increases in response to radiative forcing. IW activity is expected to increase in the NSCS through the 21st century, with implications for mitigating climate change impacts on coastal ecosystems.
    Description: This work was supported by NSF award 1220529 to Anne Cohen, by the Academia Sinica (Taiwan) through a thematic project grant to G.T.F.W. and Anne Cohen, by the Alfred P. Sloan Foundation and the WHOI Oceans and Climate Change Institute/Moltz Fellowship through awards to K.B.K., and by an NSF Graduate Research Fellowship to T.M.D.
    Description: 2015-08-10
    Keywords: Internal waves ; Climate change ; Coral reefs
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    North-South asymmetry in the modeled phytoplankton community response to climate change over the 21st century (2014)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2013. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 27 (2013): 1274–1290, doi:10.1002/2013GB004599.
    Description: Here we analyze the impact of projected climate change on plankton ecology in all major ocean biomes over the 21st century, using a multidecade (1880–2090) experiment conducted with the Community Climate System Model (CCSM-3.1) coupled ocean-atmosphere-land-sea ice model. The climate response differs fundamentally in the Northern and Southern Hemispheres for diatom and small phytoplankton biomass and consequently for total biomass, primary, and export production. Increasing vertical stratification in the Northern Hemisphere oceans decreases the nutrient supply to the ocean surface. Resulting decreases in diatom and small phytoplankton biomass together with a relative shift from diatoms to small phytoplankton in the Northern Hemisphere result in decreases in the total primary and export production and export ratio, and a shift to a more oligotrophic, more efficiently recycled, lower biomass euphotic layer. By contrast, temperature and stratification increases are smaller in the Southern compared to the Northern Hemisphere. Additionally, a southward shift and increase in strength of the Southern Ocean westerlies act against increasing temperature and freshwater fluxes to destratify the water-column. The wind-driven, poleward shift in the Southern Ocean subpolar-subtropical boundary results in a poleward shift and increase in the frontal diatom bloom. This boundary shift, localized increases in iron supply, and the direct impact of warming temperatures on phytoplankton growth result in diatom increases in the Southern Hemisphere. An increase in diatoms and decrease in small phytoplankton partly compensate such that while total production and the efficiency of organic matter export to the deep ocean increase, total Southern Hemisphere biomass does not change substantially. The impact of ecological shifts on the global carbon cycle is complex and varies across ecological biomes, with Northern and Southern Hemisphere effects on the biological production and export partially compensating. The net result of climate change is a small Northern Hemisphere-driven decrease in total primary production and efficiency of organic matter export to the deep ocean.
    Description: I. Marinov was supported by National Science Foundation (NSF) Grant ATM06-28582 while at WHOI and by NASA Grant NNX13AC92G while at Penn. I. Lima and S. Doney were supported by the Center for Microbial Oceanography, Research, and Education (CMORE), an NSF Science and Technology Center (EF-0424599).
    Description: 2014-06-20
    Keywords: Phytoplankton ; Climate change ; Ocean models
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    Large-scale alignment of oceanic nitrate and density (2014)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2013. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 118 (2013): 5322–5332, doi:10.1002/jgrc.20379.
    Description: By analyzing global data, we find that over large scales, surfaces of constant nitrate are often better aligned with isopycnals than with isobars, particularly below the euphotic zone. This is unexplained by the movement of isopycnal surfaces in response to eddies and internal waves, and is perhaps surprising given that the biological processes that alter nitrate distributions are largely depth dependent. We provide a theoretical framework for understanding the orientation of isonitrate surfaces in relation to isopycnals. In our model, the nitrate distribution results from the balance between depth-dependent biological processes (nitrate uptake and remineralization), and the along-isopycnal homogenization of properties by eddy fluxes (parameterized by eddy diffusivity). Where the along-isopycnal eddy diffusivity is relatively large, nitrate surfaces are better aligned with isopycnals than isobars. We test our theory by estimating the strength of the eddy diffusivity and biological export production from global satellite data sets and comparing their contributions. Indeed, we find that below the euphotic zone, the mean isonitrate surfaces are oriented along isopycnals where the isopycnal eddy diffusivity is large, and deviate where the biological export of organic matter is relatively strong. Comparison of nitrate data from profiling floats in different regions corroborates the hypothesis by showing variations in the nitrate-density relationship from one part of the ocean to another.
    Description: We acknowledge the support of the National Science Foundation (Grant OCE-0928617) and NASA (Grant NNX- 08AL80G).
    Description: 2014-04-15
    Keywords: Nitrate ; Export ; Mixing ; Isopycnal ; Alignment ; Large-scale
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    Diffusive vertical heat flux in the Canada Basin of the Arctic Ocean inferred from moored instruments (2014)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2014. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 119 (2014): 496-508, doi:10.1002/2013JC009346.
    Description: Observational studies have shown that an unprecedented warm anomaly has recently affected the temperature of the Atlantic Water (AW) layer lying at intermediate depth in the Arctic Ocean. Using observations from four profiling moorings, deployed in the interior of the Canada Basin between 2003 and 2011, the upward diffusive vertical heat flux from this layer is quantified. Vertical diffusivity is first estimated from a fine-scale parameterization method based on CTD and velocity profiles. Resulting diffusive vertical heat fluxes from the AW are in the range 0.1–0.2 W m−2 on average. Although large over the period considered, the variations of the AW temperature maximum yields small variations for the temperature gradient and thus the vertical diffusive heat flux. In most areas, variations in upward diffusive vertical heat flux from the AW have only a limited effect on temperature variations of the overlying layer. However, the presence of eddies might be an effective mechanism to enhance vertical heat transfer, although the small number of eddies sampled by the moorings suggest that this mechanism remains limited and intermittent in space and time. Finally, our results suggest that computing diffusive vertical heat flux with a constant vertical diffusivity of ∼2 × 10−6 m2 s−1 provides a reasonable estimate of the upward diffusive heat transfer from the AW layer, although this approximation breaks down in the presence of eddies.
    Description: C. Lique acknowledge support from JISAO and the Program on Climate Change of the University of Washington. J. Guthrie and J. Morison are supported by National Science Foundation grants ARC-0909408 and ARC-0856330. M. Steele is supported by the Office of Naval Researches Arctic and Global Prediction Program, by NSFs Division of Polar Programs, and by NASAs Cryosphere and Physical Oceanography programs. Support for the BGOS program and R. Krishfield was provided by the National Science Foundation (under grants ARC-0806115, ARC-0631951, ARC-0806306, and ARC-0856531) and Woods Hole Oceanographic Institution internal funding. For A. Proshutinsky, this research is supported by the National Science Foundation Office of Polar Programs, awards ARC-1203720 and ARC-0856531.
    Description: 2014-07-22
    Keywords: Arctic Ocean ; Atlantic water ; Mixing
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    Physical controls on hypoxia in Chesapeake Bay : a numerical modeling study (2013)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2013. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 118 (2013): 1239–1256, doi:10.1002/jgrc.20138.
    Description: A three-dimensional circulation model with a relatively simple dissolved oxygen model is used to examine the role that physical forcing has on controlling hypoxia and anoxia in Chesapeake Bay. The model assumes that the biological utilization of dissolved oxygen is constant in both time and space, isolating the role that physical forces play in modulating oxygen dynamics. Despite the simplicity of the model, it demonstrates skill in reproducing the observed variability of dissolved oxygen in the bay, highlighting the important role that variations in physical forcing have on the seasonal cycle of hypoxia. Model runs demonstrate significant changes in the annual integrated hypoxic volume as a function of river discharge, water temperature, and wind speed and direction. Variations in wind speed and direction had the greatest impact on the observed seasonal cycle of hypoxia and large impacts on the annually integrated hypoxic volume. The seasonal cycle of hypoxia was relatively insensitive to synoptic variability in river discharge, but integrated hypoxic volumes were sensitive to the overall magnitude of river discharge at annual time scales. Increases in river discharge were shown to increase hypoxic volumes, independent from the associated biological response to higher nutrient delivery. However, increases in hypoxic volume were limited at very high river discharge because increased advective fluxes limited the overall length of the hypoxic region. Changes in water temperature and its control on dissolved oxygen saturation were important to both the seasonal cycle of hypoxia and the overall magnitude of hypoxia in a given year.
    Description: The funding for this research was obtained from NSF Grant OCE-0954690 and supported by NOAA via the U.S. IOOS Office (Award Numbers NA10NOS0120063 and NA11NOS0120141) and managed by the Southeastern Universities Research Association.
    Description: 2013-09-14
    Keywords: Hypoxia ; Stratification ; Mixing ; Wind
    Repository Name: Woods Hole Open Access Server
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  • 29
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    Rates and mechanisms of turbulent dissipation and mixing in the Southern Ocean : results from the Diapycnal and Isopycnal Mixing Experiment in the Southern Ocean (DIMES) (2013)
    John Wiley & Sons
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2013. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 118 (2013): 2774–2792, doi:10.1002/jgrc.20217.
    Description: The spatial distribution of turbulent dissipation rates and internal wavefield characteristics is analyzed across two contrasting regimes of the Antarctic Circumpolar Current (ACC), using microstructure and finestructure data collected as part of the Diapycnal and Isopycnal Mixing Experiment in the Southern Ocean (DIMES). Mid-depth turbulent dissipation rates are found to increase from inline image in the Southeast Pacific to inline image in the Scotia Sea, typically reaching inline image within a kilometer of the seabed. Enhanced levels of turbulent mixing are associated with strong near-bottom flows, rough topography, and regions where the internal wavefield is found to have enhanced energy, a less-inertial frequency content and a dominance of upward propagating energy. These results strongly suggest that bottom-generated internal waves play a major role in determining the spatial distribution of turbulent dissipation in the ACC. The energy flux associated with the bottom internal wave generation process is calculated using wave radiation theory, and found to vary between 0.8 mW m−2 in the Southeast Pacific and 14 mW m−2 in the Scotia Sea. Typically, 10%–30% of this energy is found to dissipate within 1 km of the seabed. Comparison between turbulent dissipation rates inferred from finestructure parameterizations and microstructure-derived estimates suggests a significant departure from wave-wave interaction physics in the near-field of wave generation sites.
    Description: The DIMES experiment is supported by the Natural Environment Research Council (NERC) of the U.K. and U.S. National Science Foundation. K.L.S. and J.A.B. are supported by NERC.
    Description: 2013-12-04
    Keywords: Turbulent dissipation ; Internal wave ; Antarctic Circumpolar Current ; Mixing
    Repository Name: Woods Hole Open Access Server
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  • 30
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    Direct interaction between the Gulf Stream and the shelfbreak south of New England (2012)
    Nature Publishing Group
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    Publication Date: 2022-05-25
    Description: © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Scientific Reports 2 (2012): 553, doi:10.1038/srep00553.
    Description: Sea surface temperature imagery, satellite altimetry, and a surface drifter track reveal an unusual tilt in the Gulf Stream path that brought the Gulf Stream to 39.9°N near the Middle Atlantic Bight shelfbreak—200 km north of its mean position—in October 2011, while a large meander brought Gulf Stream water within 12 km of the shelfbreak in December 2011. Near-bottom temperature measurements from lobster traps on the outer continental shelf south of New England show distinct warming events (temperature increases exceeding 6°C) in November and December 2011. Moored profiler measurements over the continental slope show high salinities and temperatures, suggesting that the warm water on the continental shelf originated in the Gulf Stream. The combination of unusual water properties over the shelf and slope in late fall and the subsequent mild winter may affect seasonal stratification and habitat selection for marine life over the continental shelf in 2012.
    Description: Profiler data were made available by the Ocean Observatory Initiative (OOI) during the construction phase of the project. The OOI is funded by the National Science Foundation and managed by the Consortium for Ocean Leadership. Drifter data were provided by Tim Shaw and David Calhoun at Cape Fear Community College.GGGwas supported by NSFGrant OCE-1129125. RET was supported by the Postdoctoral Scholar Program at the Woods Hole Oceanographic Institution, with funding provided by the Cooperative Institute for the North Atlantic Region. MA was supported by the Penzance Endowed Fund in Support of Assistant Scientists.
    Keywords: Ecology ; Climate change ; Atmospheric science ; Oceanography
    Repository Name: Woods Hole Open Access Server
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  • 31
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    A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters (2012)
    Nature Publishing Group
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2012. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in The ISME Journal 6 (2012): 1901-1915, doi:10.1038/ismej.2012.31.
    Description: Antarctic surface oceans are well-studied during summer when irradiance levels are high, sea ice is melting and primary productivity is at a maximum. Coincident with this timing, the bacterioplankton respond with significant increases in secondary productivity. Little is known about bacterioplankton in winter when darkness and sea-ice cover inhibit photoautotrophic primary production. We report here an environmental genomic and small subunit ribosomal RNA (SSU rRNA) analysis of winter and summer Antarctic Peninsula coastal seawater bacterioplankton. Intense inter-seasonal differences were reflected through shifts in community composition and functional capacities encoded in winter and summer environmental genomes with significantly higher phylogenetic and functional diversity in winter. In general, inferred metabolisms of summer bacterioplankton were characterized by chemoheterotrophy, photoheterotrophy and aerobic anoxygenic photosynthesis while the winter community included the capacity for bacterial and archaeal chemolithoautotrophy. Chemolithoautotrophic pathways were dominant in winter and were similar to those recently reported in global ‘dark ocean’ mesopelagic waters. If chemolithoautotrophy is widespread in the Southern Ocean in winter, this process may be a previously unaccounted carbon sink and may help account for the unexplained anomalies in surface inorganic nitrogen content.
    Description: CSR was supported by an NSF Postdoctoral Fellowship in Biological Informatics (DBI-0532893). The research was supported by National Science Foundation awards: ANT 0632389 (to AEM and JJG), and ANT 0632278 and 0217282 (to HWD), all from the Antarctic Organisms and Ecosystems Program.
    Keywords: Antarctic bacterioplankton ; Metagenomics ; Chemolithoautotrophy
    Repository Name: Woods Hole Open Access Server
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