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  • Books  (12)
  • microbiology  (7)
  • Conservation Biology/Ecology  (5)
  • Biology  (12)
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  • 1
    Unknown
    Lausanne : Frontiers
    Keywords: hydrothermal vents ; extremophiles ; marine sediments ; Guaymas basin ; microbial biogeography ; microbiology
    Description / Table of Contents: Hydrothermally influenced microbial habitats and communities represent a much wider spectrum of geological setting, chemical in-situ regimes, and biotic community than the classical examples from basalt-hosted black smoker chimneys at active mid-ocean spreading centers. Hydrothermal vent ecosystems now include hydrothermally heated and chemically altered sediments, microbiota fueled by serpentinization reactions, and low-temperature vents with unusual menus of electron donors. Novel marine provinces and hydrothermal areas are being charted and explored, such as new hydrothermal vent systems in the Arctic, around Antarctica, in the Western Pacific and in the Indian Ocean. Novel environmental gradients and niches provide habitats for unusual or unprecedented microorganisms and microbial ecosystems. The discovery of novel extremophiles such as Aciduliprofundum and the Nanoarchaeota underscores that hydrothermal vent microbial communities can no longer be characterized as assemblages of only “typical” sulfur oxidizers, methanogens and heterotrophs. Different stages of hydrothermal activity, from early onset to peak activity, gradual decline, and persistence of cold and fossil vent sites, correspond to different colonization waves by microorganisms as well as megafauna. This research topic will continue to stretch the limits of hydrothermal vent microbiology, and also provide a forum for the chemical and microbial linkages of hydrothermal vents to the ocean water column and the ocean crust or sedimentary subsurface.
    Pages: Online-Ressource (286 Seiten)
    ISBN: 9782889196821
    Language: English
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  • 2
    Keywords: microbial ecology ; biogeochemistry ; stoichiometry ; Climate Change ; soil microbiology ; elemental fluxes ; Respiration ; aquatic microbiology ; microbiology
    Description / Table of Contents: Global biogeochemical cycles of carbon and nutrients are increasingly affected by human activities. So far, modeling has been central for our understanding of how this will affect ecosystem functioning and the biogeochemical cycling of carbon and nutrients. These models have been forced to adopt a reductive approach built on the flow of carbon and nutrients between pools that are difficult or even impossible to verify with empirical evidence. Furthermore, while some of these models include the response in physiology, ecology and biogeography of primary producers to environmental change, the microbial part of the ecosystem is generally poorly represented or lacking altogether. The principal pool of carbon and nutrients in soil is the organic matter. The turnover of this reservoir is governed by microorganisms that act as catalytic converters of environmental conditions into biogeochemical cycling of carbon and nutrients. The dependency of this conversion activity on individual environmental conditions such as pH, moisture and temperature has been frequently studied. On the contrary, only rarely have the microorganisms involved in carrying out the processes been identified, and one of the biggest challenges for advancing our understanding of biogeochemical processes is to identify the microorganisms carrying out a specific set of metabolic processes and how they partition their carbon and nutrient use. We also need to identify the factors governing these activities and if they result in feedback mechanisms that alter the growth, activity and interaction between primary producers and microorganisms. By determining how different groups of microorganisms respond to individual environmental conditions by allocating carbon and nutrients to production of biomass, CO2 and other products, a mechanistic as well as quantitative understanding of formation and decomposition of organic matter, and the production and consumption of greenhouse gases, can be achieved. In this Research Topic, supported by the Swedish research councils' programme "Biodiversity and Ecosystem Services in a Changing Landscape" (BECC), we intend to promote this alternative framework to address how cycling of carbon and nutrients will be altered in a changing environment from the first-principle mechanisms that drive them – namely the ecology, physiology and biogeography of microorganisms – and on up to emerging global biogeochemical patterns. This novel and unconventional approach has the potential to generate fresh insights that can open up new horizons and stimulate rapid conceptual development in our basic understanding of the regulating factors for global biogeochemical cycles. The vision for the research topic is to facilitate such progress by bringing together leading scientists as proponents of several disciplines. By bridging Microbial Ecology and Biogeochemistry, connecting microbial activities at the micro-scale to carbon fluxes at the ecosystem-scale, and linking above- and belowground ecosystem functioning, we can leap forward from the current understanding of the global biogeochemical cycles.
    Pages: Online-Ressource (242 Seiten)
    ISBN: 9782889192977
    Language: English
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  • 3
    Keywords: bacteriophages ; environmental disturbance ; phage ecology ; aquatic microbiology ; phage therapy ; metaviromes ; evolution ; microarrays ; microbiology
    Description / Table of Contents: Viruses infect numerous microorganisms including, predominantly, Bacteria (bacteriophages or phages) but also Archaea, Protists, and Fungi. They are the most abundant and ubiquitous biological entities on Earth and are important drivers of ecosystem functioning. Little is known, however, about the vast majority of these viruses of microorganisms, or VoMs. Modern techniques such as metagenomics have enabled the discovery and description of more presumptive VoMs than ever before, but also have exposed gaps in our understanding of VoM ecology. Exploring the ecology of these viruses – which is how they interact with host organisms, the abiotic environment, larger organisms, and even other viruses across a variety of environments and conditions – is the next frontier. Integration of a growing molecular understanding of VoMs with ecological studies will expand our knowledge of ecosystem dynamics. Ecology can be studied at multiple levels including individual organisms, populations, communities, whole ecosystems, and the entire biosphere. Ecology additionally can consider normal, equilibrium conditions or instead perturbations. Perturbations are of particular interest because measuring the effect of disturbances on VoM-associated communities provides important windows into how VoMs contribute to ecosystem dynamics. These disturbances in turn can be studied through in vitro, in vivo, and in situ experimentation, measuring responses by VoM-associated communities to changes in nutrient availability, stress, physical disruption, seasonality, etc., and could apply to studies at all ecological levels. These are considered here across diverse systems and environments.
    Pages: Online-Ressource (95 Seiten)
    ISBN: 9782889194483
    Language: English
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  • 4
    Keywords: Life sciences ; Climate change ; Animal ecology ; Conservation biology ; Ecology ; Vertebrates ; Life Sciences ; Conservation Biology/Ecology ; Vertebrates ; Animal Ecology ; Climate Change/Climate Change Impacts
    Description / Table of Contents: Bats in the Anthropocene --- Urbanisation and its effects on bats – a global meta-analysis --- Bats and roads --- Responses of tropical bats to habitat fragmentation, logging, and deforestation --- Insectivorous bats and silviculture: balancing timber production and bat conservation --- Bats in the anthropogenic matrix: Challenges and opportunities for the conservation of Chiroptera and their ecosystem services in agricultural landscapes --- Dark matters: the effects of artificial lighting on bats --- Bats and water: anthropogenic alterations threaten global bat populations --- White-nose syndrome in bats --- Zoonotic viruses and conservation of bats --- Impacts of Wind Energy Development on Bats: a Global Perspective --- Exploitation of Bats for Bushmeat and Medicine --- The conflict between pteropodid bats and fruit growers: species, legislation and mitigation --- Bats and buildings: The conservation of synanthropic bats --- Conservation ecology of cave bats --- The roles of taxonomy and systematics in bat conservation --- Networking networks for global bat conservation --- Cute, Creepy, or Crispy – how values, attitudes and norms shape human behavior toward bats. 
    Pages: Online-Ressource (IX, 606 pages) , 77 illustrations, 52 illustrations in color
    ISBN: 9783319252209
    Language: English
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  • 5
    Keywords: Life sciences ; Applied ecology ; Biodiversity ; Ecosystems ; Conservation biology ; Ecology ; Community psychology ; Environmental psychology ; Life Sciences ; Applied Ecology ; Biodiversity ; Conservation Biology/Ecology ; Ecosystems ; Community and Environmental Psychology
    Description / Table of Contents: 1. The Biodiversity Data Impediment to a Sustainable World (Working in a Networked World) --- 2. Essential Biodiversity Variables --- 3. Stratification and Terrestrial Ecosystem Observations --- 4. Ecosystem Services --- 5. Species Observations --- 6. Monitoring Changes in Genetic Diversity --- 7. Marine and Coastal Systems --- 8. Biodiversity Observations for Freshwater Ecosystems --- 9. Remote Sensing for Biodiversity --- 10. Involving Citizen Scientists in Biodiversity Observation --- 11. Biodiversity Modelling --- 12. Cyber-Architecture --- 13. Using Data for Decision-Making: From Observations To Indicators and Other Policy Tools --- 14. Capacity Building in Biodiversity Monitoring – Case Studies
    Pages: Online-Ressource (XII, 326 pages) , 34 illustrations, 27 illustrations in color
    ISBN: 9783319272887
    Language: English
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  • 6
    Keywords: Life sciences ; Virology ; Animal ecology ; Aquatic ecology ; Conservation biology ; Ecology ; Wildlife ; Fish ; Environmental health ; Life Sciences ; Animal Ecology ; Environmental Health ; Fish & Wildlife Biology & Management ; Virology ; Freshwater & Marine Ecology ; Conservation Biology/Ecology
    Description / Table of Contents: Introduction --- Distribution and Phylogeny of Ranaviruses --- Host-pathogen Ecology and Evolution --- Molecular Biology of Ranaviruses --- Immune Evasion and Host Immunity --- Pathology and Diagnostics --- Design and Analysis of Ranavirus Studies --- Global Ranavirus Consortium
    Pages: Online-Ressource (X, 246 pages) , 25 illustrations, 21 illustrations in color
    ISBN: 9783319137551
    Language: English
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  • 7
    Keywords: Life sciences ; Ecosystems ; Aquatic ecology ; Conservation biology ; Ecology ; Nature conservation ; Marine sciences ; Freshwater ; Life Sciences ; Freshwater & Marine Ecology ; Ecosystems ; Conservation Biology/Ecology ; Nature Conservation ; Marine & Freshwater Sciences
    Description / Table of Contents: Chapter 1. Challenges in Riverine Ecosystem Management --- Part I Human Impacts, Mitigation and Restoration --- Chapter 2. Historic Milestones of Human River Uses and Ecological Impacts --- Chapter 3. River Morphology, Channelization, and Habitat Restoration --- Chapter 4. River Hydrology, Flow Alteration, and Environmental Flow --- Chapter 5. Hydropeaking Impacts and Mitigation --- Chapter 6. Dams: Ecological Impacts and Management --- Chapter 7. Aquatic Habitat Modeling in Running Waters --- Chapter 8. The Role of Sediment and Sediment Dynamics in the Aquatic Environment --- Chapter 9. River Connectivity, Habitat Fragmentation and Related Restoration Meas --- Chapter 10. Phosphorus and Nitrogen Dynamics in Riverine Systems: Human Impacts and Management Options --- Chapter 11. Climate Change Impacts in Riverine Ecosystems --- Chapter 12. Ecotoxicology --- Chapter 13. Land Use --- Chapter 14. Recreational Fisheries – The Need for Sustainability in Fisheries Management of Alpine Rivers --- Part II Management, Methodologies, Governance --- Chapter 15. Restoration in Integrated River Basin Management --- Chapter 16.Adaptive Management of Riverine Socio-ecological Systems --- Chapter 17. Legislative Framework for River Ecosystem Management on International and European Level --- Chapter 18. Ensuring Long-Term Cooperation Over Transboundary Water Resources Through Joint River Basin Management --- Chapter 19. Biomonitoring and Bioassessment --- Chapter 20. Biodiversity and Freshwater Information Systems --- Chapter 21. Ecosystem Services in River Landscapes --- Chapter 22. Public Participation and Environmental Education --- Chapter 23. NGOs in Freshwater Resource Management --- Part III Case Studies --- Chapter 24. Danube Under Pressure: Hydropower Rules the Fish --- Chapter 25. Danube Floodplain Lobau --- Chapter 26. Danube Sturgeons: Past and Future --- Chapter 27. Healthy Fisheries Sustain Society and Ecology in Burkina Faso --- Chapter 28. The Tisza River: Managing a Lowland River in the Carpathian Basin --- Part IV Summary --- Chapter 29. Landmarks, Advances and Future Challenges in Riverine Ecosystem Management
    Pages: Online-Ressource (VII, 571 pages) , 123 illustrations, 82 illustrations in color
    ISBN: 9783319732503
    Language: English
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  • 8
    Keywords: microbiology ; carbon cycle ; B vitamins ; cobalamin ; thiamin ; Pyridoxin ; Trace metals ; Molybdenum ; Vanadium ; Nickel ; Copper ; Coenzymes
    Description / Table of Contents: In the last three decades, research has extensively focused on the role of Fe and other mineral nutrients in regulating biological processes, ranging from the surface to the deep ocean. This has produced major breakthroughs in our understanding of the fundamental role of those bioactive elements on the carbon, nitrogen and sulfur cycles and ecosystem function. However, biological processes cannot be entirely sustained by that small set of chemical elements, and new scientific evidence suggests that trace metals other than Fe (e.g., Co, Mo and Ni) as well as essential organic growth factors (e.g., vitamins) may also be crucial in most aquatic systems.
    Pages: Online-Ressource (109 Seiten)
    ISBN: 9782889195466
    Language: English
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  • 9
    Keywords: microbial ecology ; biogeochemistry ; stoichiometry ; Climate Change ; soil microbiology ; elemental fluxes ; Respiration ; aquatic microbiology ; microbiology
    Description / Table of Contents: Advances in next generation sequencing technologies, omics, and bioinformatics are revealing a tremendous and unsuspected diversity of microbes, both at a compositional and functional level. Moreover, the expansion of ecological concepts into microbial ecology has greatly advanced our comprehension of the role microbes play in the functioning of ecosystems across a wide range of biomes. Super-imposed on this new information about microbes, their functions and how they are organized, environmental gradients are changing rapidly, largely driven by direct and indirect human activities. In the context of global change, understanding the mechanisms that shape microbial communities is pivotal to predict microbial responses to novel selective forces and their implications at the local as well as global scale. One of the main features of microbial communities is their ability to react to changes in the environment. Thus, many studies have reported changes in the performance and composition of communities along environmental gradients. However, the mechanisms underlying these responses remain unclear. It is assumed that the response of microbes to changes in the environment is mediated by a complex combination of shifts in the physiological properties, single-cell activities, or composition of communities: it may occur by means of physiological adjustments of the taxa present in a community or selecting towards more tolerant/better adapted phylotypes. Knowing whether certain factors trigger one, many, or all mechanisms would greatly increase confidence in predictions of future microbial composition and processes. This Research Topic brings together studies that applied the latest molecular techniques for studying microbial composition and functioning and integrated ecological, biogeochemical and/or modeling approaches to provide a comprehensive and mechanistic perspective of the responses of micro-organisms to environmental changes. This Research Topic presents new findings on environmental parameters influencing microbial communities, the type and magnitude of response and differences in the response among microbial groups, and which collectively deepen our current understanding and knowledge of the underlying mechanisms of microbial structural and functional responses to environmental changes and gradients in both aquatic and terrestrial ecosystems. The body of work has, furthermore, identified many challenges and questions that yet remain to be addressed and new perspectives to follow up on.
    Pages: Online-Ressource (263 Seiten)
    ISBN: 9782889197231
    Language: English
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  • 10
    Unknown
    Lausanne : Frontiers
    Keywords: nitrogen cycle ; microbial ecology ; nitrogen fixation ; denitrification ; Anammox ; nitrification ; microbiology
    Description / Table of Contents: Nitrogen is an essential element in biological systems, and one that often limits production in both aquatic and terrestrial systems. Due to its requirement in biological macromolecules, its acquisition and cycling have the potential to structure microbial communities, as well as to control productivity on the ecosystem scale. In addition, its versatile redox chemistry is the basis of complex biogeochemical transformations that control the inventory of fixed nitrogen, both in local environments and over geological time. Although many of the pathways in the microbial nitrogen cycle were described more than a century ago, additional fundamental pathways have been discovered only recently. These findings imply that we still have much to learn about the microbial nitrogen cycle, the organisms responsible for it, and their interactions in natural and human environments. Progress in nitrogen cycle research has been facilitated by recent rapid technological advances, especially in genomics and isotopic approaches. In this Research Topic, we reviewed the leading edge of nitrogen cycle research based on these approaches, as well as by exploring microbial processes in modern ecosystems.
    Pages: Online-Ressource (175 Seiten)
    ISBN: 9782889194124
    Language: English
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