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  • 1
    Unbekannt
    Lausanne : Frontiers
    Schlagwort(e): nitrogen cycle ; microbial ecology ; nitrogen fixation ; denitrification ; Anammox ; nitrification ; microbiology
    Beschreibung / Inhaltsverzeichnis: Nitrogen is an essential element in biological systems, and one that often limits production in both aquatic and terrestrial systems. Due to its requirement in biological macromolecules, its acquisition and cycling have the potential to structure microbial communities, as well as to control productivity on the ecosystem scale. In addition, its versatile redox chemistry is the basis of complex biogeochemical transformations that control the inventory of fixed nitrogen, both in local environments and over geological time. Although many of the pathways in the microbial nitrogen cycle were described more than a century ago, additional fundamental pathways have been discovered only recently. These findings imply that we still have much to learn about the microbial nitrogen cycle, the organisms responsible for it, and their interactions in natural and human environments. Progress in nitrogen cycle research has been facilitated by recent rapid technological advances, especially in genomics and isotopic approaches. In this Research Topic, we reviewed the leading edge of nitrogen cycle research based on these approaches, as well as by exploring microbial processes in modern ecosystems.
    Seiten: Online-Ressource (175 Seiten)
    ISBN: 9782889194124
    Sprache: Englisch
    Standort Signatur Erwartet Verfügbarkeit
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  • 2
    Schlagwort(e): bacteriophages ; environmental disturbance ; phage ecology ; aquatic microbiology ; phage therapy ; metaviromes ; evolution ; microarrays ; microbiology
    Beschreibung / Inhaltsverzeichnis: Viruses infect numerous microorganisms including, predominantly, Bacteria (bacteriophages or phages) but also Archaea, Protists, and Fungi. They are the most abundant and ubiquitous biological entities on Earth and are important drivers of ecosystem functioning. Little is known, however, about the vast majority of these viruses of microorganisms, or VoMs. Modern techniques such as metagenomics have enabled the discovery and description of more presumptive VoMs than ever before, but also have exposed gaps in our understanding of VoM ecology. Exploring the ecology of these viruses – which is how they interact with host organisms, the abiotic environment, larger organisms, and even other viruses across a variety of environments and conditions – is the next frontier. Integration of a growing molecular understanding of VoMs with ecological studies will expand our knowledge of ecosystem dynamics. Ecology can be studied at multiple levels including individual organisms, populations, communities, whole ecosystems, and the entire biosphere. Ecology additionally can consider normal, equilibrium conditions or instead perturbations. Perturbations are of particular interest because measuring the effect of disturbances on VoM-associated communities provides important windows into how VoMs contribute to ecosystem dynamics. These disturbances in turn can be studied through in vitro, in vivo, and in situ experimentation, measuring responses by VoM-associated communities to changes in nutrient availability, stress, physical disruption, seasonality, etc., and could apply to studies at all ecological levels. These are considered here across diverse systems and environments.
    Seiten: Online-Ressource (95 Seiten)
    ISBN: 9782889194483
    Sprache: Englisch
    Standort Signatur Erwartet Verfügbarkeit
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  • 3
    Schlagwort(e): deep subsurface ; marine sediment ; deep biosphere ; ocean crust ; subseafloor sediment ; Methane ; Peru margin ; Hydrogen ; acetogenesis ; sulfate reduction ; microbiology
    Beschreibung / Inhaltsverzeichnis: Deep subsurface microbiology is a highly active and rapidly advancing research field at the interface of microbiology and the geosciences; it focuses on the detection, identification, quantification, cultivation and activity measurements of bacteria, archaea and eukaryotes that permeate the subsurface biosphere of deep marine sediments and the basaltic ocean and continental crust. The deep subsurface biosphere abounds with uncultured, only recently discovered and – at best - incompletely understood microbial populations. In spatial extent and volume, Earth’s subsurface biosphere is only rivaled by the deep sea water column. So far, no deep subsurface sediment has been found that is entirely devoid of microbial life; microbial cells and DNA remain detectable at sediment depths of more than 1 km; microbial life permeates deeply buried hydrocarbon reservoirs, and is also found several kilometers down in continental crust aquifers. Severe energy limitation, either as electron acceptor or donor shortage, and scarcity of microbially degradable organic carbon sources are among the evolutionary pressures that have shaped the genomic and physiological repertoire of the deep subsurface biosphere. Its biogeochemical role as long-term organic carbon repository, inorganic electron and energy source, and subduction recycling engine continues to be explored by current research at the interface of microbiology, geochemistry and biosphere/geosphere evolution. This Research Topic addresses some of the central research questions about deep subsurface microbiology and biogeochemistry: phylogenetic and physiological microbial diversity in the deep subsurface; microbial activity and survival strategies in severely energy-limited subsurface habitats; microbial activity as reflected in process rates and gene expression patterns; biogeographic isolation and connectivity in deep subsurface microbial communities; the ecological standing of subsurface biospheres in comparison to the surface biosphere – an independently flourishing biosphere, or mere survivors that tolerate burial (along with organic carbon compounds), or a combination of both? Advancing these questions on Earth’s deep subsurface biosphere redefines the habitat range, environmental tolerance, activity and diversity of microbial life.
    Seiten: Online-Ressource (303 Seiten)
    ISBN: 9782889195367
    Sprache: Englisch
    Standort Signatur Erwartet Verfügbarkeit
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  • 4
    Schlagwort(e): microbiology ; carbon cycle ; B vitamins ; cobalamin ; thiamin ; Pyridoxin ; Trace metals ; Molybdenum ; Vanadium ; Nickel ; Copper ; Coenzymes
    Beschreibung / Inhaltsverzeichnis: In the last three decades, research has extensively focused on the role of Fe and other mineral nutrients in regulating biological processes, ranging from the surface to the deep ocean. This has produced major breakthroughs in our understanding of the fundamental role of those bioactive elements on the carbon, nitrogen and sulfur cycles and ecosystem function. However, biological processes cannot be entirely sustained by that small set of chemical elements, and new scientific evidence suggests that trace metals other than Fe (e.g., Co, Mo and Ni) as well as essential organic growth factors (e.g., vitamins) may also be crucial in most aquatic systems.
    Seiten: Online-Ressource (109 Seiten)
    ISBN: 9782889195466
    Sprache: Englisch
    Standort Signatur Erwartet Verfügbarkeit
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  • 5
    Unbekannt
    Lausanne : Frontiers
    Schlagwort(e): hydrothermal vents ; extremophiles ; marine sediments ; Guaymas basin ; microbial biogeography ; microbiology
    Beschreibung / Inhaltsverzeichnis: Hydrothermally influenced microbial habitats and communities represent a much wider spectrum of geological setting, chemical in-situ regimes, and biotic community than the classical examples from basalt-hosted black smoker chimneys at active mid-ocean spreading centers. Hydrothermal vent ecosystems now include hydrothermally heated and chemically altered sediments, microbiota fueled by serpentinization reactions, and low-temperature vents with unusual menus of electron donors. Novel marine provinces and hydrothermal areas are being charted and explored, such as new hydrothermal vent systems in the Arctic, around Antarctica, in the Western Pacific and in the Indian Ocean. Novel environmental gradients and niches provide habitats for unusual or unprecedented microorganisms and microbial ecosystems. The discovery of novel extremophiles such as Aciduliprofundum and the Nanoarchaeota underscores that hydrothermal vent microbial communities can no longer be characterized as assemblages of only “typical” sulfur oxidizers, methanogens and heterotrophs. Different stages of hydrothermal activity, from early onset to peak activity, gradual decline, and persistence of cold and fossil vent sites, correspond to different colonization waves by microorganisms as well as megafauna. This research topic will continue to stretch the limits of hydrothermal vent microbiology, and also provide a forum for the chemical and microbial linkages of hydrothermal vents to the ocean water column and the ocean crust or sedimentary subsurface.
    Seiten: Online-Ressource (286 Seiten)
    ISBN: 9782889196821
    Sprache: Englisch
    Standort Signatur Erwartet Verfügbarkeit
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  • 6
    Schlagwort(e): meteorology ; weather ; atmosphere ; atmospheric sciences ; climate research ; environmental research
    Beschreibung / Inhaltsverzeichnis: Classifications of circulation weather systems have a long history in meteorology and climatology. Starting with manual classifications over specific regions of the globe, these tools (generally called “catalogs of synoptic types”) were restricted mainly to weather forecasting and historical climate variability studies. In the last decades, the advance of computing resources and the availability of datasets have fostered the development of fast and objective methods that process large amount of data. In recent years numerous methods of circulation type classification have been designed, showing their usefulness on a wide range of applications in scientific domains related to weather, climate, and environment. This Research Topic highlights methodological advances in circulation weather types and also their applications to different research areas. The articles included in this research topic show that circulation weather types can be used not only in Europe, where they have been always more frequent, but also applied to other regions of the world.
    Seiten: Online-Ressource (153 Seiten)
    ISBN: 9782889196418
    Sprache: Englisch
    Standort Signatur Erwartet Verfügbarkeit
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