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  • Other Sources  (503)
  • GEOMAR  (277)
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  • 1
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    GEOMAR
    Publication Date: 2024-01-04
    Description: RV Meteor M197 EMS-PS ('Eastern Mediterranean Sea - Process Study'), 30.12.2023 – 06.02.2024
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  • 2
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    GEOMAR
    Publication Date: 2024-01-08
    Description: RV Meteor M197 EMS-PS ('Eastern Mediterranean Sea - Process Study'), 30.12.2023 – 06.02.2024
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  • 3
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    GEOMAR
    Publication Date: 2024-01-16
    Description: RV Meteor M197 EMS-PS ('Eastern Mediterranean Sea - Process Study'), 30.12.2023 – 06.02.2024
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  • 4
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    GEOMAR
    Publication Date: 2024-01-24
    Description: RV Meteor M197 EMS-PS ('Eastern Mediterranean Sea - Process Study'), 30.12.2023 – 06.02.2024
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  • 5
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    GEOMAR
    Publication Date: 2024-02-02
    Description: RV Meteor M197 EMS-PS ('Eastern Mediterranean Sea - Process Study'), 30.12.2023 – 06.02.2024
    Type: Report , NonPeerReviewed
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  • 6
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    GEOMAR
    Publication Date: 2024-02-07
    Description: RV Meteor M197 EMS-PS ('Eastern Mediterranean Sea - Process Study'), 30.12.2023 – 06.02.2024
    Type: Report , NonPeerReviewed
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  • 7
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    GEOMAR
    Publication Date: 2024-02-13
    Description: RV MARIA S. MERIAN MSM126 “Jellyweb Madeira” 9. Februar – 4. März 2024 1. Wochenbericht (9.-11. Februar, 2024)
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  • 8
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    GEOMAR
    Publication Date: 2024-02-22
    Description: RV MARIA S. MERIAN MSM126 “Jellyweb Madeira” 9. Februar – 4. März 2024 2.Wochenbericht (12. – 18. Februar 2024)
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  • 9
    Publication Date: 2024-02-23
    Description: Compositional variations of amphibole stratigraphically recovered from multiple eruptions at a given volcano have a great potential to archive long-term magmatic processes in its crustal plumbing system. Calcic amphibole is a ubiquitous yet chemically and texturally diverse mineral at Mount St. Helens (MSH), where it occurs in dacites and in co-magmatic enclaves throughout the Spirit Lake stage (last ~4000 years of eruptive history). It forms three populations with distinct geochemical trends in key major and trace elements, which are subdivided into a high-Al (11–14.5 wt% Al2O3), a medium-Al (10–12.5 wt% Al2O3), and a low-Al (7.5–10 wt% Al2O3) amphibole population. The oldest investigated tephra record (Smith Creek period, 3900–3300 years BP) yields a bimodal amphibole distribution in which lower-crustal, high-Al amphibole cores (crystallized dominantly from basaltic andesite to andesite melts) and upper-crustal, low-Al amphibole rims (crystallized from rhyolitic melt) document occasional recharge of a shallow silicic mush by a more mafic melt from a lower-crustal reservoir. The sudden appearance of medium-Al amphiboles enriched in incompatible trace elements in eruptive periods younger than 2900 years BP is associated with a change in reservoir conditions toward hotter and drier magmas, which indicates recharge of the shallow silicic reservoir by basaltic melt enriched in incompatible elements. Deep-crystallizing, high-Al amphibole, however, appears mostly unaffected by such incompatible-element-enriched basaltic recharge, suggesting that these basalts bypass the lower crustal reservoir. This could be the result of the eastward offset position of the lower crustal reservoir relative to the upper crustal storage zone underneath the MSH edifice. Amphibole has proven to be a sensitive geochemical archive for uncovering storage conditions of magmas at MSH. In agreement with geophysical observations, storage and differentiation have occurred in two main zones: an upper crustal and lower crustal reservoir (the lower one being chemically less evolved). The upper crustal silicic reservoir, offset to the west of the lower crustal reservoir, has captured compositionally unusual mafic recharge (drier, hotter, and enriched in incompatible trace elements in comparison to the typical parental magmas in the region), resulting in an increased chemical diversity of amphiboles and their carrier intermediate magmas, in the last ~3000 years of MSH’s volcanic record.
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  • 10
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    GEOMAR
    Publication Date: 2024-02-27
    Description: RV MARIA S. MERIAN MSM126 “Jellyweb Madeira” 9. Februar – 4. März 2024 3.Wochenbericht (19. – 25. Februar 2024)
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  • 11
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    GEOMAR
    Publication Date: 2024-03-04
    Description: RV MARIA S. MERIAN MSM126 “Jellyweb Madeira” 9. Februar – 4. März 2024 4.Wochenbericht (26.Februar – 03. März 2024)
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  • 12
    Publication Date: 2024-04-05
    Description: Current global warming results in rising sea-water temperatures, and the loss of sea ice in arctic and subarctic oceans impacts the community composition of primary producers with cascading effects on the food web and potentially on carbon export rates. This study analyzes metagenomic shotgun and diatom rbcL amplicon-sequencing data from sedimentary ancient DNA (sedaDNA) of the subarctic western Bering Sea that records phyto- and zooplankton community changes over the last glacial–interglacial cycle, including the last interglacial period (Eemian). Our data show that interglacial and glacial plankton communities differ, with distinct Eemian and Holocene plankton communities. The generally warm Holocene period is dominated by pico-sized cyanobacteria and bacteria-feeding heterotrophic protists, while the Eemian period is dominated by eukaryotic pico-sized chlorophytes and Triparmaceae. In contrast, the glacial period is characterized by micro-sized phototrophic protists, including sea-ice associated diatoms in the family Bacillariaceae and co-occurring diatom-feeding crustaceous zooplankton. Our deep-time record of plankton community changes reveals a long-term decrease in phytoplankton cell size coeval with increasing temperatures, and resembling community changes in the currently warming Bering Sea. The phytoplankton community in the warmer-than-present Eemian period is distinct from modern communities and limits the use of the Eemian as an analog for future climate scenarios. However, under enhanced future warming, the expected shift towards the dominance of small-sized phytoplankton and heterotrophic protists might result in an increased productivity, whereas the community’s potential of carbon export will be decreased, thereby weakening the subarctic Bering Sea’s function as an effective carbon sink.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 13
    Publication Date: 2024-05-06
    Description: Several species from various zooplankton taxa perform seasonal vertical migrations (SVM) of typically several hundred meters between the surface layer and overwintering depths, particularly in high-latitude regions. We use OPtimality-based PLAnkton (OPPLA) ecosystem model) to simulate SVM behavior in zooplankton in the Labrador Sea. Zooplankton in OPPLA is a generic functional group without life cycle, which facilitates analyzing SVM evolutionary stability and interactions between SVM and the plankton ecosystem. A sensitivity analysis of SVM-related parameters reveals that SVM can amplify the seasonal variations of phytoplankton and zooplankton and enhance the reduction of summer surface nutrient concentrations. SVM is often explained as a strategy to reduce exposure to visual predators during winter. We find that species doing SVM can persist and even dominate the summer-time zooplankton community, even in the presence of Stayers, which have the same traits as the migrators, but do not perform SVM. The advantage of SVM depends strongly on the timing of the seasonal migrations, particularly the day of ascent. The presence of higher (visual) predators tends to suppress the Stayers in our simulations, whereas the SVM strategy can persist in the presence of non-migrating species even without higher predators.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 14
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    GEOMAR
    Publication Date: 2023-04-21
    Description: FS METEOR Reise M189, 16.04. – 13.05.2023, Walvis Bay (Namibia) – Walvis Bay (Namibia): 1.Wochenbericht (16.04.2023)
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  • 15
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    GEOMAR
    Publication Date: 2023-04-25
    Description: FS METEOR Reise M189, 16.04. – 13.05.2023, Walvis Bay (Namibia) – Walvis Bay (Namibia): 2. Wochenbericht (17. - 23.04.2023)
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  • 16
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    GEOMAR
    Publication Date: 2023-05-08
    Description: FS METEOR Reise M189, 16.04. – 13.05.2023, Walvis Bay (Namibia) – Walvis Bay (Namibia): 3. Wochenbericht ((24. - 30.04.2023)
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  • 17
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    GEOMAR
    Publication Date: 2023-06-21
    Description: FS ALKOR Ausfahrt AL595 GPF 21-2_037 31.05. – 20.06.2023 Kiel – Island – Kiel AUV@Grimsey Bathymetrische und mikrobiologische Untersuchungen am Grimsey Hydrothermalfeld Wochenbericht Nr.1 31.05. – 05.06.2023
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  • 18
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    Publication Date: 2023-06-21
    Description: FS ALKOR Ausfahrt AL595 GPF 21-2_037 31.05. – 20.06.2023 Kiel – Island – Kiel AUV@Grimsey Bathymetrische und mikrobiologische Untersuchungen am Grimsey Hydrothermalfeld Wochenbericht Nr. 2 6.06. – 12.06.2023
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  • 19
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    Publication Date: 2023-06-21
    Description: FS ALKOR Ausfahrt AL595 GPF 21-2_037 31.05. – 20.06.2023 Kiel – Island – Kiel AUV@Grimsey Bathymetrische und mikrobiologische Untersuchungen am Grimsey Hydrothermalfeld Wochenbericht Nr.3 13.06. – 19.06.2023
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  • 20
    Publication Date: 2023-06-26
    Description: 06.06. – 29.07.2023, Townsville (Australien) – Singapur
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  • 21
    Publication Date: 2023-06-26
    Description: 06.06. – 29.07.2023, Townsville (Australien) – Singapur
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  • 22
    Publication Date: 2023-07-07
    Description: 06.06. – 29.07.2023, Townsville (Australien) – Singapur
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  • 23
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    GEOMAR
    Publication Date: 2023-07-19
    Type: Proceedings , NonPeerReviewed
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  • 24
    Publication Date: 2023-07-19
    Description: 06.06. – 29.07.2023, Townsville (Australien) – Singapur
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  • 25
    Publication Date: 2023-07-19
    Description: 06.06. – 29.07.2023, Townsville (Australien) – Singapur
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  • 26
    Publication Date: 2023-07-31
    Description: 06.06. – 29.07.2023, Townsville (Australien) – Singapur
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  • 27
    Publication Date: 2023-07-31
    Description: 06.06. – 29.07.2023, Townsville (Australien) – Singapur
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  • 28
    Publication Date: 2023-09-14
    Description: The Digital Earth Viewer is a tool for the visualisation and exploration of geospatial data in true 3D over time. It runs on Windows, MacOS and Linux and only requires a modern webbrowser to use. Common file formats such as CSV, netCDF, GeoTIFF and many more are natively supported
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  • 29
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    GEOMAR
    Publication Date: 2023-11-07
    Description: TRANSFORMERS II, MARIA S. MERIAN 122 Ponta Delgada – Halifax, 19. Oktober bis 9. November 2023 1. Wochenbericht (19.10.- 22.10.2023)
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  • 30
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    GEOMAR
    Publication Date: 2023-11-07
    Description: TRANSFORMERS II, MARIA S. MERIAN 122 Ponta Delgada – Halifax, 19. Oktober bis 9. November 2023 2. Wochenbericht (23.10.- 29.10.2023)
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  • 31
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    GEOMAR
    Publication Date: 2023-11-07
    Description: TRANSFORMERS II, MARIA S. MERIAN 122, Ponta Delgada – Halifax, 19. Oktober bis 9. November 2023 3. Wochenbericht (30.10.- 05.11.2023)
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  • 32
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    GEOMAR
    Publication Date: 2023-12-05
    Description: MSM123 “BELS” Halifax – St. John’s 23. November – 27. Dezember 2023 2.Wochenbericht (27.11. 2023 - 03.12.2023)
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  • 33
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    GEOMAR
    Publication Date: 2023-12-11
    Description: MSM123 “BELS” Halifax – St. John’s 23. November – 27. Dezember 2023 3.Wochenbericht (04.12.2023 - 10.12.2023)
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  • 34
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    GEOMAR
    Publication Date: 2023-12-19
    Description: MSM123 “BELS” Halifax – St. John’s 23. November – 27. Dezember 2023 4.Wochenbericht (11.12.2023 - 17.12.2023)
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  • 35
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    GEOMAR
    Publication Date: 2024-01-05
    Description: MSM123 “BELS” Halifax – St. John’s 23. November – 27. Dezember 2023 5. Wochenbericht (23.12.2023 - 27.12.2023)
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  • 36
    Publication Date: 2024-01-17
    Description: Background and Aims Dysregulated mineral homeostasis is common in chronic kidney disease (CKD) and associated with bone demineralization and vascular calcification. The balance between bone formation and resorption, which reflect the bone calcium (Ca) balance (BCaB), cannot be determined without bone biopsy which is invasive and not easily repeatable. Recently, we have shown that stable (i.e. non-radioactive) Ca isotopes, 42Ca and 44Ca, can be measured in serum and their ratio (δ44/42Caserum) quantitatively determines net bone gain or loss of Ca. Thus, when bone formation exceeds bone resorption, the net BCaB is positive and δ44/42Caserum is high, and when bone resorption is the predominant process δ44/42Caserum is low compared to age-matched controls. In this study we compared δ44/42Caserum against δ44/42Cabone and arterial biopsy samples (δ44/42Caartery) and the sensitivity of δ44/42Ca in predicting changes in bone histology.
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  • 37
    Publication Date: 2024-02-07
    Description: The seismic receiver function (RF) technique is widely used as an economic method to image earth's deep interior in a large number of seismic experiments. P-wave receiver functions (RFs) constrain crustal thickness and average Vp/Vs in the crust by analysis of the Ps phase and multiples (reflected/converted waves) from the Moho. Regional studies often show significant differences between the Moho depth constrained by RF and by reflection/refraction methods. We compare the results from RF and controlled source seismology for the Baikal Rift Zone by calculating 1480 synthetic RFs for a seismic refraction/reflection velocity model and processing them with two common RF techniques [H–κ and Common Conversion Point (CCP) stacking]. We compare the resulting synthetic RF structure with the velocity model, a density model (derived from gravity and the velocity model), and with observed RFs. Our results demonstrate that the use of different frequency filters, the presence of complex phases from sediments and gradual changes in the properties of crustal layers can lead to erroneous interpretation of RFs and incorrect geological interpretations. We suggest that the interpretation of RFs should be combined with other geophysical methods, in particular in complex tectonic regions and that the long-wavelength Bouguer gravity anomaly signal may provide effective calibration for the determination of the correct Moho depth from RF results. We propose and validate a new automated, efficient method for this calibration.
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  • 38
    Publication Date: 2024-02-07
    Description: The neritic-oceanic squid Illex argentinus supports one of the largest fisheries in the Southwest Atlantic. It is characterized by extensive migrations across the Patagonian Shelf and complex population structure comprising distinct seasonal spawning groups. To address uncertainty as to the demographic independence of these groups that may compromise sustainable management, a multidisciplinary approach was applied integrating statolith ageing with genome-wide single-nucleotide polymorphism (SNP) analysis. To obtain complete coverage of the spawning groups, sampling was carried out at multiple times during the 2020 fishing season and covered a large proportion of the species' range across the Patagonian Shelf. Statolith and microstructure analysis revealed three distinct seasonal spawning groups of winter-, spring-, and summer-hatched individuals. Subgroups were identified within each seasonal group, with statolith microstructure indicating differences in environmental conditions during ontogeny. Analysis of 〉10 000 SNPs reported no evidence of neutral or non-neutral genetic structure among the various groups. These findings indicate that I. argentinus across the Patagonian Shelf belong to one genetic population and a collaborative management strategy involving international stakeholders is required. The connectivity among spawning groups may represent a "bet-hedging" mechanism important for population resilience.
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  • 39
    Publication Date: 2024-02-07
    Description: The dynamics of marine systems at decadal scales are notoriously hard to predict—hence references to this timescale as the “grey zone” for ocean prediction. Nevertheless, decadal-scale prediction is a rapidly developing field with an increasing number of applications to help guide ocean stewardship and sustainable use of marine environments. Such predictions can provide industry and managers with information more suited to support planning and management over strategic timeframes, as compared to seasonal forecasts or long-term (century-scale) predictions. The most significant advances in capability for decadal-scale prediction over recent years have been for ocean physics and biogeochemistry, with some notable advances in ecological prediction skill. In this paper, we argue that the process of “lighting the grey zone” by providing improved predictions at decadal scales should also focus on including human dimensions in prediction systems to better meet the needs and priorities of end users. Our paper reviews information needs for decision-making at decadal scales and assesses current capabilities for meeting these needs. We identify key gaps in current capabilities, including the particular challenge of integrating human elements into decadal prediction systems. We then suggest approaches for overcoming these challenges and gaps, highlighting the important role of co-production of tools and scenarios, to build trust and ensure uptake with end users of decadal prediction systems. We also highlight opportunities for combining narratives and quantitative predictions to better incorporate the human dimension in future efforts to light the grey zone of decadal-scale prediction.
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  • 40
    Publication Date: 2024-02-07
    Description: Post-collisional volcanism contains important clues for understanding the processes that prevail in orogenic belts, including those in the mantle and the uplift and collapse of continents. Here we report new geochronological and geochemical data for a suite of post-collisional Miocene to Pleistocene volcanic rocks from northwest Iran. Four groups of volcanic rocks can be distinguished according to their geochemical and isotopic signatures, including: (1) Miocene depleted lavas with high Nd and Hf but low Pb and Sr isotopic ratios, (2) less depleted lavas with quite variable Pb isotopic composition, (3) lavas with non-radiogenic Nd and Hf isotopic values, but highly radiogenic Sr and Pb isotopic composition, and (4) Pleistocene adakitic rocks with depleted isotopic signatures. The isotopic data reveal that the Miocene rocks are derived from asthenospheric and highly heterogeneous sub-continental lithospheric mantle sources. Evidence suggests that the lithospheric mantle contains recycled upper continental material and is isotopically similar to the enriched mantle two (EMII) end-member. Analysis of Sr-Nd-Pb-Hf-O isotopes in both mineral and rock groundmass, in conjunction with energy-constrained assimilation and fractional crystallization (EC-AFC) numerical modeling, demonstrates that the incorporation of continental crust during magma fractionation via AFC had an insignificant impact on the isotopic composition of the Miocene lavas. Moreover, adakites are the youngest rocks and show a geochemical signature consistent with the partial melting of a young and mafic continental lower crust. Both seismological data and geochemical signatures on these Miocene to Pleistocene volcanic rocks indicate the initiation of asthenospheric upwelling and orogen uplift in the Arabia-Eurasia collision zone, which occurred after slab break-off, following the Neotethyan closure.
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  • 41
    Publication Date: 2024-02-07
    Description: Primary andesitic magmas could be an important component of arc magma genesis and might have played a key role in the advent of continents. Recent studies hypothesized that primary andesitic magmas occur in the oceanic arc, where the crust is thin. The Kermadec arc has the thinnest crust among all the studied oceanic arcs (〈15 km in thickness); however, there are no studies that corroborate the formation of primary andesitic magmas in the arc. The aim of this study is to develop a better understanding of primary andesites in oceanic arcs through the petrology of the Kermadec arc. Here, we present the petrology of volcanic rocks dredged from the Kibblewhite Volcano in the Kermadec arc during the R/V SONNE SO-255 expedition in 2017. Magma types range from andesite to rhyolite at the Kibblewhite Volcano, but basalts dominate at the neighboring cones. This study focuses on magnesian andesites from the northeastern flank of this volcano. The magnesian andesites are nearly aphyric and plagioclase free but contain microphenocrysts of olivine (Fo84–86) and clinopyroxene (Mg# = 81–87). Using olivine addition models, the primary magmas were estimated to contain 55–56 wt % SiO2 and 10–12 wt % MgO, similar to the high-Mg andesites observed in other convergent plate margins, indicating the generation of primary andesitic magma beneath the Kibblewhite Volcano. The trace element and isotopic characteristics of the magnesian andesites are typical of volcanic rocks from the Kermadec arc. This indicates that the subduction of a young plate or melting of a pyroxenitic source is not necessary to produce magnesian andesites. Instead, we propose that the magnesian andesites were produced by the direct melting of the uppermost mantle of the Kermadec arc. The thin crust of the Kermadec arc should yield low-pressure conditions in the uppermost mantle, allowing the sub-arc mantle to generate primary andesitic melts. This study supports the hypothesis that primary andesitic magmas generate in the arc where the crust is thin and provides a new insight into the magma genesis of the Kermadec arc.
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  • 42
    Publication Date: 2024-02-07
    Description: Mitochondrial genomes (mitogenomes) of flowering plants are composed of multiple chromosomes. Recombination within and between the mitochondrial chromosomes may generate diverse DNA molecules termed isoforms. The isoform copy number and composition can be dynamic within and among individual plants due to uneven replication and homologous recombination. Nonetheless, despite their functional importance, the level of mitogenome conservation within species remains understudied. Whether the ontogenetic variation translates to evolution of mitogenome composition over generations is currently unknown. Here we show that the mitogenome composition of the seagrass Zostera marina is conserved among worldwide populations that diverged ca. 350,000 years ago. Using long-read sequencing, we characterized the Z. marina mitochondrial genome and inferred the repertoire of recombination-induced configurations. To characterize the mitochondrial genome architecture worldwide and study its evolution, we examined the mitogenome in Z. marina meristematic region sampled in 16 populations from the Pacific and Atlantic oceans. Our results reveal a striking similarity in the isoform relative copy number, indicating a high conservation of the mitogenome composition among distantly related populations and within the plant germline, despite a notable variability during individual ontogenesis. Our study supplies a link between observations of dynamic mitogenomes at the level of plant individuals and long-term mitochondrial evolution.
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  • 43
    Publication Date: 2024-02-07
    Description: Marine algae are central to global carbon fixation and their productivity is dictated largely by resource availability. Reduced nutrient availability is predicted for vast oceanic regions as an outcome of climate change, however there is much to learn regarding response mechanisms of the tiny picoplankton that thrive in these environments, especially eukaryotic phytoplankton. Here, we investigate responses of the picoeukaryote Micromonas commoda, a green alga found throughout subtropical and tropical oceans. Under shifting phosphate (P) availability scenarios, transcriptomic analyses revealed altered expression of transfer RNA (tRNA) modification enzymes and biased codon usage of transcripts more abundant during P-limiting versus P-replete conditions, consistent with the role of tRNA modifications in regulating codon recognition. To associate the observed shift in expression of the tRNA modification enzyme complement with the tRNAs encoded by M. commoda, we also determined the tRNA repertoire of this alga revealing potential targets of the modification enzymes. Codon usage bias was particularly pronounced in transcripts encoding proteins with direct roles in managing P-limitation and photosystem-associated proteins that have ill-characterized putative functions in “light stress”. The observed codon usage bias corresponds to a proposed stress response mechanism in which the interplay between stress-induced changes in tRNA modifications and skewed codon usage in certain essential response genes drives preferential translation of the encoded proteins. Collectively, we expose a potential underlying mechanism for achieving growth under enhanced nutrient limitation, that extends beyond the catalog of up- or down-regulated protein-encoding genes, to the cell biological controls that underpin acclimation to changing environmental conditions.
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  • 44
    Publication Date: 2024-02-07
    Description: Omic BON is a thematic Biodiversity Observation Network under the Group on Earth Observations Biodiversity Observation Network (GEO BON), focused on coordinating the observation of biomolecules in organisms and the environment. Our founding partners include representatives from national, regional, and global observing systems; standards organizations; and data and sample management infrastructures. By coordinating observing strategies, methods, and data flows, Omic BON will facilitate the co-creation of a global omics meta-observatory to generate actionable knowledge. Here, we present key elements of Omic BON's founding charter and first activities.
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  • 45
    Publication Date: 2024-02-07
    Description: Young grapevines (Vitis vinifera) suffer and eventually can die from the crown gall disease caused by the plant pathogen Allorhizobium vitis (Rhizobiaceae). Virulent members of A. vitis harbor a tumor-inducing plasmid and induce formation of crown galls due to the oncogenes encoded on the transfer DNA. The expression of oncogenes in transformed host cells induces unregulated cell proliferation and metabolic and physiological changes. The crown gall produces opines uncommon to plants, which provide an important nutrient source for A. vitis harboring opine catabolism enzymes. Crown galls host a distinct bacterial community, and the mechanisms establishing a crown gall–specific bacterial community are currently unknown. Thus, we were interested in whether genes homologous to those of the tumor-inducing plasmid coexist in the genomes of the microbial species coexisting in crown galls. We isolated 8 bacterial strains from grapevine crown galls, sequenced their genomes, and tested their virulence and opine utilization ability in bioassays. In addition, the 8 genome sequences were compared with 34 published bacterial genomes, including closely related plant-associated bacteria not from crown galls. Homologous genes for virulence and opine anabolism were only present in the virulent Rhizobiaceae. In contrast, homologs of the opine catabolism genes were present in all strains including the nonvirulent members of the Rhizobiaceae and non-Rhizobiaceae. Gene neighborhood and sequence identity of the opine degradation cluster of virulent and nonvirulent strains together with the results of the opine utilization assay support the important role of opine utilization for cocolonization in crown galls, thereby shaping the crown gall community.
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  • 46
    Publication Date: 2024-02-07
    Description: Eutrophication in marine waters is traditionally assessed by checking if nutrients, algal biomass and oxygen are below/above a given threshold. However, increased biomass, nutrient concentrations and oxygen demand do not lead to undesirable environmental effects if the flow of carbon/energy from primary producers toward high trophic levels is consistently preserved. Consequently, traditional indicators might provide a misleading assessment of the eutrophication risk. To avoid this, we propose to evaluate eutrophication by using a new index based on plankton trophic fluxes instead of biogeochemical concentrations. A preliminary, model-based, assessment suggests that this approach might give a substantially different picture of the eutrophication status of our seas, with potential consequences on marine ecosystem management. Given the difficulties to measure trophic fluxes in the field, the use of numerical simulations is recommended although the uncertainty associated with biogeochemical models inevitably affects the reliability of the index. However, given the effort currently in place to develop refined numerical tools describing the marine environment (Ocean Digital Twins), a reliable, model-based, eutrophication index could be operational in the near future.
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  • 47
    Publication Date: 2024-02-07
    Description: Macroalgal (seaweed) genomic resources are generally lacking as compared to other eukaryotic taxa, and this is particularly true in the red algae (Rhodophyta). Understanding red algal genomes is critical to understanding eukaryotic evolution given that red algal genes are spread across eukaryotic lineages from secondary endosymbiosis and red algae diverged early in the Archaeplastids. The Gracilariales is a highly diverse and widely distributed order including species that can serve as ecosystem engineers in intertidal habitats and several notorious introduced species. The genus Gracilaria is cultivated worldwide, in part for its production of agar and other bioactive compounds with downstream pharmaceutical and industrial applications. This genus is also emerging as a model for algal evolutionary ecology. Here, we report new whole genome assemblies for two species (G. chilensis and G. gracilis), a draft genome assembly of G. caudata, and genome annotation of the previously published G. vermiculophylla genome. To facilitate accessibility and comparative analysis, we integrated these data in a newly created web-based portal dedicated to red algal genomics (https://rhodoexplorer.sb-roscoff.fr). These genomes will provide a resource for understanding algal biology and, more broadly, eukaryotic evolution.
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  • 48
    Publication Date: 2024-02-07
    Description: Biological invasions are a global challenge that has received insufficient attention. Recently available cost syntheses have provided policy- and decision makers with reliable and up-to-date information on the economic impacts of biological invasions, aiming to motivate effective management. The resultant InvaCost database is now publicly and freely accessible and enables rapid extraction of monetary cost information. This has facilitated knowledge sharing, developed a more integrated and multidisciplinary network of researchers, and forged multidisciplinary collaborations among diverse organizations and stakeholders. Over 50 scientific publications so far have used the database and have provided detailed assessments of invasion costs across geographic, taxonomic, and spatiotemporal scales. These studies have provided important information that can guide future policy and legislative decisions on the management of biological invasions while simultaneously attracting public and media attention. We provide an overview of the improved availability, reliability, standardization, and defragmentation of monetary costs; discuss how this has enhanced invasion science as a discipline; and outline directions for future development.
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  • 49
    Publication Date: 2024-02-07
    Description: The development and physiology of herring larvae were monitored for individuals reared in control and combined warming-acidification crossed with different food quality treatments. The experiment revealed that warming and acidification triggers a stress response at the molecular level and decrease herring larvae size-at-stage. Global change puts coastal systems under pressure, affecting the ecology and physiology of marine organisms. In particular, fish larvae are sensitive to environmental conditions, and their fitness is an important determinant of fish stock recruitment and fluctuations. To assess the combined effects of warming, acidification and change in food quality, herring larvae were reared in a control scenario (11 & DEG;C*pH 8.0) and a scenario predicted for 2100 (14 & DEG;C*pH 7.6) crossed with two feeding treatments (enriched in phosphorus and docosahexaenoic acid or not). The experiment lasted from hatching to the beginning of the post-flexion stage (i.e. all fins present) corresponding to 47 days post-hatch (dph) at 14 & DEG;C and 60 dph at 11 & DEG;C. Length and stage development were monitored throughout the experiment and the expression of genes involved in growth, metabolic pathways and stress responses were analysed for stage 3 larvae (flexion of the notochord). Although the growth rate was unaffected by acidification and temperature changes, the development was accelerated in the 2100 scenario, where larvae reached the last developmental stage at a smaller size (-8%). We observed no mortality related to treatments and no effect of food quality on the development of herring larvae. However, gene expression analyses revealed that heat shock transcripts expression was higher in the warmer and more acidic treatment. Our findings suggest that the predicted warming and acidification environment are stressful for herring larvae, inducing a decrease in size-at-stage at a precise period of ontogeny. This could either negatively affect survival and recruitment via the extension of the predation window or positively increase the survival by reducing the larval stage duration.
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  • 50
    Publication Date: 2024-02-14
    Description: Machine learning covers a large set of algorithms that can be trained to identify patterns in data. Thanks to the increase in the amount of data and computing power available, it has become pervasive across scientific disciplines. We first highlight why machine learning is needed in marine ecology. Then we provide a quick primer on machine learning techniques and vocabulary. We built a database of & SIM;1000 publications that implement such techniques to analyse marine ecology data. For various data types (images, optical spectra, acoustics, omics, geolocations, biogeochemical profiles, and satellite imagery), we present a historical perspective on applications that proved influential, can serve as templates for new work, or represent the diversity of approaches. Then, we illustrate how machine learning can be used to better understand ecological systems, by combining various sources of marine data. Through this coverage of the literature, we demonstrate an increase in the proportion of marine ecology studies that use machine learning, the pervasiveness of images as a data source, the dominance of machine learning for classification-type problems, and a shift towards deep learning for all data types. This overview is meant to guide researchers who wish to apply machine learning methods to their marine datasets.
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  • 51
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    Publication Date: 2022-02-22
    Description: Expedition SO287 – CONNECT 11.12.2021 - 11.01.2022 Las Palmas-Guayaquil Wochenbericht Nr. 4 27.12.2021- 02.01.2022
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  • 52
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    GEOMAR
    Publication Date: 2022-02-22
    Description: Expedition SO287 – CONNECT 11.12.2021 - 11.01.2022 Las Palmas-Guayaquil Wochenbericht Nr. 5 03. - 10.01.2022
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  • 53
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    GEOMAR
    Publication Date: 2022-03-08
    Description: FS MARIA S. MERIAN - MSM106 (26.02. - 19.03.2022) 2. Wochenbericht (28.2. – 6.3.2022)
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  • 54
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    GEOMAR
    Publication Date: 2022-03-17
    Description: FS MARIA S. MERIAN - MSM106 (26.02. – 19.03.2022) 3. Wochenbericht (07.03. – 13.03.2022)
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  • 55
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    GEOMAR
    Publication Date: 2022-03-22
    Description: FS MARIA S. MERIAN - MSM106 (26.02. - 19.03.2022) 1. Wochenbericht (23. – 27.02.2022)
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  • 56
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    GEOMAR
    Publication Date: 2022-09-07
    Description: Fahrtabschnitt 14.05. - 22.05.2022
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  • 57
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    Publication Date: 2022-09-07
    Description: Fahrtabschnitt 30.08. - 04.09.2022
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  • 58
    Publication Date: 2022-12-22
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  • 59
    Publication Date: 2022-12-22
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  • 60
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    Publication Date: 2023-09-19
    Description: Las Palmas, Spain - Guayaquil, Ecuador 11.12.2021 - 11.02.2022
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  • 61
    Publication Date: 2024-02-07
    Description: We analyse the consistency of the delay time data in the most recent version of the ISC-EHB bulletin published by the International Seismological Centre covering the years 1964–2018. Considering that the delays are influenced by the lateral heterogeneity in the Earth’s mantle, we construct a tomographic matrix. We use singular value decomposition of the tomographic matrix for 19 707 dense clusters of earthquakes to compute objective estimates of the standard error from data that project into the null space and should be zero if there were no errors. Using a robust initial estimate of the standard deviation of the clustered delay times, we remove a small fraction of outliers before calculating the ultimate errors. We found that the errors depend on the type of body wave, depth of the earthquake (crust or mantle) and the number of decimals with which the arrival time was reported. Using these parameters, we distinguish 45 different classes of delay times for 11 different types of body waves. The errors of each class so divided generally follow a distribution that is approximately normal with a mean that ranges from 0.32 s for PKPbc waves from mantle earthquakes, to 2.82 s for S waves from shallow earthquakes bottoming in the upper mantle. The widths of the distributions of the errors themselves are small enough to serve in formal statistical quantification of the quality of fit in tomographic experiments.
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  • 62
    Publication Date: 2024-02-23
    Description: Volcano seismology is an essential tool for monitoring volcanic processes in the advent and during eruptions. A variety of seismic signals can be recorded at volcanoes, of which some are thought to be related to the migration of fluids which is of primary importance for the anticipation of imminent eruptions. We investigate the volcanic crises at Villarrica volcano in 2015 and report on a newly discovered very-long-period (VLP) signal that accompanies phases of periodic long period (LP) signal burst. Despite their low amplitude emergent character, we can locate the source region of the 1 Hz LP signals to the close vicinity of the volcano using a network-based correlation method. The source of the VLP signal with a period of about 30–100 s appears to locate in the vicinity of two stations a few kilometres from the summit. Both stations record very similar VLP waveforms that are correlated with the envelope of the LP bursts. A shallow magma reservoir was inferred by Contreras from surface deformation as the source of inflation following the eruption in 2015. Cyclic volume changes of 6 m3 in this reservoir at 3 km depth can explain the observed amplitudes of the vertical VLP signal. We propose that the LP signal is generated by the migration of gas or gas-rich magma that is periodically released from the inflating reservoir through a non-linear valve structure which modulates the flux, and thereby causes bursts of flow-related LP signals and pressure changes observed as VLP deformation. Our model predicts that the correlated occurrence of LP bursts and VLP surface motion depends on the intensity of the fluid flux. A weaker flux of fluids may not exceed the opening pressure of valve structure, and higher rates might maintain pressure above the closing pressure. In both cases, the VLP signal vanishes. Our observation provides constrains for models of fluid transport inside volcanoes. At Villarrica the VLP signal, and its relation to the LP activity, reveal additional information about fluxes in the magmatic reservoir that might aide forecasting of volcanic activity.
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  • 63
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    GEOMAR
    In:  GEOMAR, Kiel, Germany, 3 pp.
    Publication Date: 2021-05-26
    Description: FS Alkor Reise 556, Fahrtabschnitt 14.05. - 22.05.2021 Die Ostsee hat im Rahmen des Klimawandels und wachsender anthropogener Nutzung in den letzten 50 Jahren tiefgreifende und im globalen Vergleich besonders schnell ablaufende Veränderungen, wie Erwärmung, Versauerung, Eutrophierung, zunehmenden Sauerstoffmangel, Überfischung, und die Ausbreitung invasiver Arten, erfahren. Die ökologischen und ökonomischen Konsequenzen dieser langfristigen Veränderungen sind durch kurzfristige Projekte nur schwer zu verfolgen. Umso wichtiger sind Langzeitdatenreihen, die auch dekadische Muster abbilden. Das Hauptziel der Ausfahrt AL556 ist es, durch Probennahmen und hydrographische Messungen eine der besten verfügbaren Langzeitdatenreihen für die pelagische Ostsee fortzusetzen. So wurden seit 1986 in den tiefen Becken der Ostsee mit Hauptfokus auf dem Bornholmbecken mit konsistenter Methodik pelagische Schleppnetzfischerei und Fischprobennahmen, Beprobungen des pelagischen Nahrungsnetzes (Phyto- und Zooplankton einschließlich Ichthyo- und gelatinösem („Quallen“) Plankton), ozeanographische/hydrographische Messungen und Hydroakustikaufnahmen durchgeführt. Diese Arbeiten werden während der AL556 weitergeführt, wobei die Ausfahrt aufgrund einer Corona-bedingten Unterbrechung der Langzeitdatenreihe in 2020 von besonderer Bedeutung ist. Die gewonnenen Proben und Daten sind dabei für verschiedene Projekte und internationale Kollaborationen der Abteilung „Marine Evolutionary Ecology“ am GEOMAR relevant. Dazu gehören insbesondere das Projekt "Fischereiindizierte Evolution" im Rahmen der DFG-Graduiertenschule TransEvo (CAU /GEOMAR), und das EU Horizon 2020 Projektes GoJelly. Sonderprojekte in 2021 sind zudem die Isolation von marinen Viren und der Phytoyplanktonart Ostreococcus für das Projekt Marine Mikroben und Viren der Ostsee unter dem Einfluß des Klimawandels und Probennahmen für die Untersuchung der Nahrungsökologie von Fischlarven und planktivoren adulten Fischen mit Hilfe molekularbiologischer Ansätze („Metabarcoding“).
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  • 64
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    In:  [Proceedings]
    Publication Date: 2021-03-26
    Description: Modern digital scientific workflows - often implying Big Data challenges - require data infrastructures and innovative data science methods across disciplines and technologies. Diverse activities within and outside HGF deal with these challenges, on all levels. The series of Data Science Symposia fosters knowledge exchange and collaboration in the Earth and Environment research community.
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  • 65
    Publication Date: 2021-05-17
    Description: Global models show generally a large model-data misfit with regard to oxygen. One of the most intense OMZs is located in the Arabian Sea. The scripts serve to give an overview of the main model deficiencies in the Indian Ocean with a detailed comparison of the historical state of ten climate models from the 5th coupled model intercomparison project (CMIP5) that present our present-day understanding of physical and biogeochemical processes.
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  • 66
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    In:  GEOMAR, Kiel, Germany, 17 pp.
    Publication Date: 2021-11-04
    Description: CMSY++ is an advanced state-space Bayesian method for stock assessment that estimates fisheries reference points (MSY, Fmsy, Bmsy) as well as status or relative stock size (B/Bmsy) and fishing pressure or exploitation (F/Fmsy) from catch and (optionally) abundance data, a prior for resilience or productivity (r), and broad priors for the ratio of biomass to unfished biomass (B/k) at the beginning, an intermediate year, and the end of the time series. For the purpose of this User Guide, the whole package is referred to as CMSY++ whereas the part of the method that deals with catch-only data is referred to as CMSY (catch MSY), and the part of the method that requires additional abundance data is referred to as BSM (Bayesian Schaefer Model). Both methods are based on a modified Schaefer surplus production model (see paper cited above for more details). The main advantage of BSM, compared to other implementations of surplus production models, is the focus on informative priors and the acceptance of short and incomplete (i.e., fragmented, with missing years) abundance data. This document provides a simple step-by-step guide for researchers who want to apply CMSY++ to their own data.
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  • 67
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    In:  [Software]
    Publication Date: 2021-11-09
    Description: With this script, the Meridional Overturning Circulation (MOC) can be computed from NEMO ocean-model output for the whole globe or the Atlantic (AMOC), Indic (IMOC) and Pacific (PMOC) subbasins. The MOC is computable in z- and sigma coordinates. Moreover, for nested configurations, it is possible to combine data from both host and nest grids. Finally, it is possible to take into account of that the ORCA model grid is curvilinear north of 20°N: it is possible to compute the northward velocity component from the velocity field in x- and y- directions and to sum up the meridional flux over latitudional bands instead of in x-direction. When both steps are applied, the resulting MOC shows however strong variability in meridional direction. It needs to be clarified, whether this is realistic or not. The software is provided in the form of the jupyter notebook "MOC.ipynb" which includes more informations on the possibilites of the computations and an extensive appendix section with comparisons to computations with cdftools, as well as with details on the computation of the MOC including nest data and taking the curvilinearity of the grid into account. Necessary python modules are listed at the beginning of the document.
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  • 68
    Publication Date: 2022-01-07
    Description: The female flowers (“cones”) of the hop plant (Humulus L.) produce compounds that contribute to the flavor and other properties of beer. Hop leaves and cones produce many of the same compounds, which also confer agronomic traits such as insect and disease resistance. Targeted and untargeted ultraperformance liquid chromatography-quadrupole time-of-flight–mass spectrometry with Waters MSE technology (UPLC-QTof-MSE) metabolomics were used to compare leaf phytochemical compositions of greenhouse-grown southwestern American wild Humulus neomexicanus (A. Nelson and Cockerell) Rydb. against a group of commercial hop cultivars consisting of both pure European Humulus lupulus L. and European–North American hybrids. Principal component analysis showed a clear distinction in chemical profiles between the two groups. H. neomexicanus leaves had a significantly higher content of total α acids (p = 4.4 × 10–9), total bitter acids (p = 2.6 × 10–6), cohumulone (p = 1.0 × 10–13), humulone + adhumulone (p = 9.1 × 10–4), and the prenylflavonoids xanthohumol (p = 0.013) and desmethylxanthohumol (p = 0.029) as well as significantly higher densities of glandular trichomes (p = 1.3 × 10–6), the biosynthetic site of those compounds. Most flavonol glycosides measured were also significantly more abundant in H. neomexicanus (p = 1.5 × 10–22 to 0.0027), whereas phenolic acids were consistently, but generally nonsignificantly (p 〉 0.05), more abundant in the cultivars. The higher bitter acid, prenylflavonoid, and flavonol glycoside content of H. neomexicanus leaves may help to confer more favorable insect and disease-resistance properties.
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  • 69
    Publication Date: 2022-01-07
    Description: Iron is an indispensable metabolic cofactor in both pro- and eukaryotes, which engenders a natural competition for the metal between bacterial pathogens and their human or animal hosts. Bacteria secrete siderophores that extract Fe3+ from tissues, fluids, cells, and proteins; the ligand gated porins of the Gram-negative bacterial outer membrane actively acquire the resulting ferric siderophores, as well as other iron-containing molecules like heme. Conversely, eukaryotic hosts combat bacterial iron scavenging by sequestering Fe3+ in binding proteins and ferritin. The variety of iron uptake systems in Gram-negative bacterial pathogens illustrates a range of chemical and biochemical mechanisms that facilitate microbial pathogenesis. This document attempts to summarize and understand these processes, to guide discovery of immunological or chemical interventions that may thwart infectious disease.
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  • 70
    Publication Date: 2022-01-07
    Description: While thousands of environmental metagenomes have been mined for the presence of novel biosynthetic gene clusters, such computational predictions do not provide evidence of their in vivo biosynthetic functionality. Using fluorescent in situ enzyme assay targeting carrier proteins common to polyketide (PKS) and nonribosomal peptide synthetases (NRPS), we applied fluorescence-activated cell sorting to tunicate microbiome to enrich for microbes with active secondary metabolic capabilities. Single-cell genomics uncovered the genetic basis for a wide biosynthetic diversity in the enzyme-active cells and revealed a member of marine Oceanospirillales harboring a novel NRPS gene cluster with high similarity to phylogenetically distant marine and terrestrial bacteria. Interestingly, this synthase belongs to a larger class of siderophore biosynthetic gene clusters commonly associated with pestilence and disease. This demonstrates activity-guided single-cell genomics as a tool to guide novel biosynthetic discovery.
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  • 71
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    In:  GEOMAR, Kiel, Germany, 4 pp.
    Publication Date: 2022-01-10
    Description: Expedition SO287 – CONNECT 11.12.2021 - 11.01.2022 Las Palmas-Guayaquil Wochenbericht Nr. 3 20.12. - 26.12.2021
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  • 72
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    Institute of Marine Ecosystem and Fishery Science (IMF) | GEOMAR
    Publication Date: 2022-02-21
    Description: 19.07. – 27.07.2021, Kiel (Germany) – Kiel (Germany) BALTEACH - 1
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    GEOMAR
    Publication Date: 2022-02-22
    Description: Expedition SO287 – CONNECT 11.12.2021 - 11.01.2022 Las Palmas - Guayaquil 1. Wochenbericht 10.12. - 12.12.2021
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    Publication Date: 2022-02-22
    Description: Expedition SO287 – CONNECT 11.12.2021 - 11.01.2022 Las Palmas - Guayaquil 2. Wochenbericht 13.12. - 19.12.2021
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  • 75
    Publication Date: 2022-05-27
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    Publication Date: 2022-10-24
    Description: SONNE 284 Mooring Rescue Emden - Emden, 27.06. - 17.08.2021 1. WOCHENBERICHT 27.06. - 04.07.2021
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    Publication Date: 2022-10-24
    Description: SONNE 284 Mooring Rescue Emden - Emden, 27.06. - 17.08.2021 5. WOCHENBERICHT 26.07. - 01.08.2021
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    Publication Date: 2022-10-24
    Description: SONNE 284 Mooring Rescue Emden - Emden, 27.06. - 17.08.2021 3. WOCHENBERICHT 12.07. - 18.07.2021
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  • 79
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    GEOMAR
    Publication Date: 2022-10-24
    Description: SONNE 284 Mooring Rescue Emden - Emden, 27.06. - 17.08.2021 2. WOCHENBERICHT 05.07. - 11.07.2021
    Type: Report , NonPeerReviewed
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  • 80
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    GEOMAR
    Publication Date: 2022-10-24
    Description: SONNE 284 Mooring Rescue Emden - Emden, 27.06. - 17.08.2021 6. WOCHENBERICHT 02.08. - 08.08.2021
    Type: Report , NonPeerReviewed
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  • 81
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    GEOMAR
    Publication Date: 2022-10-24
    Description: SONNE 284 Mooring Rescue Emden - Emden, 27.06. - 17.08.2021 4. WOCHENBERICHT 19.07. - 25.07.2021
    Type: Report , NonPeerReviewed
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  • 82
    Publication Date: 2022-12-22
    Description: Dates of Cruise: 02.-06.08.2021 Areas of Research: Aquarium West Shore Port Calls: Grenå DK (03.08. - 05.08.2021, 2 nights) Institute: GEOMAR Helmholtz Centre for Ocean Research Kiel Acquisition of living marine organism for the institute’s own aquarium in the northern Kattegat.
    Type: Report , NonPeerReviewed
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  • 83
    Publication Date: 2022-12-22
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  • 84
    Publication Date: 2023-01-13
    Description: The Net-Zero-2050 cluster aims for a national roadmap for net zero CO2 emissions by 2050, including integrated scenario analyses and negative emission technology assessment (see fact sheet Net-Zero-2050 Structure Project 1). This national target to substantially reduce national CO2 emissions by 2050 stems from the objective to comply with the global long-term temperature goal of well below 2°C of the Paris Agreement (UNFCCC, 2015). Within the cluster it is therefore important to decide on an approach for deriving a national remaining carbon budget from global emissions trajectories in agreement with the Paris Climate Agreement’s longterm temperature goal (UNFCCC, 2015). Allocating national carbon budgets is a balance of environmental effectiveness, equity, national capacity and ability, political feasibility, economic efficiency and technical requirements (Gignac and Matthews, 2015; Höhne et al., 2003; 2014). Given Germany’s capacity and abilities, we decided to follow a sustainable growth trajectory with a convergence phase to equal-per-capita CO2 emissions by 2035, and a net zero CO2 emissions trajectory after 2050 until the end of the century. This approach leads to a remaining Germany CO2 budget of 9 GtCO2 (from 1st January 2018 to 2050 and 2100), which we propose to be used across the Net-Zero-2050 cluster. The remaining carbon budget will serve as a target to be used in all work packages in a concerted way, either qualitatively or quantitatively, and in accordance with other work packages (see also fact sheet Net-Zero-2050 Energy Scenario Approach). The calculated budget is at the lower end of the national budget if allocated by the grandfathering approach (emissions are allocated with respect to today’s emissions shares: 5.5-13.1 GtCO2), but slightly higher than the highest estimate of an equal-per-capita remaining carbon budget (emissions are allocated with respect to Germany’s share of the global population: 3.5-8.4 GtCO2) The 9 GtCO2 national remaining CO2 budget, 6.9 GtCO2 from 1st January 2021, will need to be broken down by category (e.g. energy, land use, industrial processes, and man-made sinks and sources; see Gap Analysis Report) in order to provide a consistent approach across work packages.
    Type: Report , NonPeerReviewed
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  • 85
    Publication Date: 2023-03-23
    Description: This report is thought as a guide to early hydrographic log sheets of bottle data obtained by the former Institut für Meereskunde, Kiel (IFMK, now integrated into GEOMAR) in the post-war years 1946 to 1956, and which in summer 2018 when a building used by GEOMAR was to clear were not available in digitized format at GEOMAR. The data mostly were taken by the research cutter FK “Südfall” in the Baltic. It turned out that some of these data from 1950 to 1956 were available in digitized form at the on-line data bank of the International Council for the Exploration of the Sea (ICES). Comparison with the original logged data sheets, however, showed that they needed to be improved w/r to time and position and to be completed by missing data. This report shortly describes the methods of sampling and measuring these old data, and the processing steps applied to improve the data set by using the data log sheets before archiving and submitting the now improved and complete data set to data centres for archiving.
    Type: Report , NonPeerReviewed , info:eu-repo/semantics/book
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  • 86
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    GEOMAR
    Publication Date: 2023-07-17
    Type: Report , NonPeerReviewed , info:eu-repo/semantics/book
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  • 87
    Publication Date: 2023-09-19
    Description: 14.6. – 18.6.2021 Areas of Research: Public relations and aquarium west shore Port Calls: Grena/ DK (15.6. – 17.6.2021) Acquisition of living marine organisms for the public relations division (GEOMAR), the institute’s own aquarium and the Multimar Wattforum - Tönning in the northern Kattegat.
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  • 88
    Publication Date: 2024-02-07
    Description: Full waveform inversion (FWI) is a data-fitting technique capable of generating high-resolution velocity models with a resolution down to half the seismic wavelength. FWI is applied typically to densely sampled seismic data. In this study, we applied FWI to 3D wide-angle seismic data acquired using sparsely spaced ocean bottom seismometers (OBSs) from the Deep Galicia Margin west of Iberia. Our dataset samples the S-reflector, a low-angle detachment present in this area. Here we highlight differences between 2D, 2.5D and 3D-FWI performances using a real sparsely spaced dataset. We performed 3D FWI in the time domain and compared the results with 2D and 2.5D FWI results from a profile through the 3D model. When overlaid on multichannel seismic images, the 3D FWI results constrain better the complex faulting within the pre- and syn-rift sediments and crystalline crust compared to the 2D result. Furthermore, we estimate variable serpentinisation of the upper mantle below the S-reflector along the profile using 3D FWI, reaching a maximum of 45 per cent. Differences in the data residuals of the 2D, 2.5D and 3D inversions suggest that 2D inversion can be prone to overfitting when using a sparse dataset. To validate our results, we performed tests to recover the anomalies introduced by the inversions in the final models using synthetic datasets. Based on our comparison of the velocity models, we conclude that the use of 3D data can partially mitigate the problem of receiver sparsity in FWI.
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  • 89
    Publication Date: 2024-02-07
    Description: Probing seismic anisotropy of the lithosphere provides valuable clues on the fabric of rocks. We present a 3-D probabilistic model of shear wave velocity and radial anisotropy of the crust and uppermost mantle of Europe, focusing on the mountain belts of the Alps and Apennines. The model is built from Love and Rayleigh dispersion curves in the period range 5–149 s. Data are extracted from seismic ambient noise recorded at 1521 broad-band stations, including the AlpArray network. The dispersion curves are first combined in a linearized least squares inversion to obtain 2-D maps of group velocity at each period. Love and Rayleigh maps are then jointly inverted at depth for shear wave velocity and radial anisotropy using a Bayesian Monte Carlo scheme that accounts for the trade-off between radial anisotropy and horizontal layering. The isotropic part of our model is consistent with previous studies. However, our anisotropy maps differ from previous large scale studies that suggested the presence of significant radial anisotropy everywhere in the European crust and shallow upper mantle. We observe instead that radial anisotropy is mostly localized beneath the Apennines while most of the remaining European crust and shallow upper mantle is isotropic. We attribute this difference to trade-offs between radial anisotropy and thin (hectometric) layering in previous studies based on least-squares inversions and long period data (〉30 s). In contrast, our approach involves a massive data set of short period measurements and a Bayesian inversion that accounts for thin layering. The positive radial anisotropy (VSH 〉 VSV) observed in the lower crust of the Apennines cannot result from thin layering. We rather attribute it to ductile horizontal flow in response to the recent and present-day extension in the region.
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  • 90
    Publication Date: 2024-02-07
    Description: Seismic full waveform inversion (FWI) is a powerful method for estimating quantitative subsurface physical parameters from seismic data. As the full waveform inversion is a non-linear problem, the linearized approach updates model iteratively from an initial model, which can get trapped in local minima. In the presence of a high velocity contrast, such as at Moho, the reflection coefficient and recorded waveforms from wide-aperture seismic acquisition are extremely non-linear around critical angles. The problem at the Moho is further complicated by the interference of lower crustal (Pg) and upper mantle (Pn) turning ray arrivals with the critically reflected Moho arrivals (PmP). In order to determine velocity structure near Moho, a non-linear method should be used. We propose to solve this strong non-linear FWI problem at Moho using a trans-dimensional Markov chain Monte Carlo (MCMC) method, where the earth model between lower crust and upper mantle is idealy parameterized with a 1-D assumption using a variable number of velocity interfaces. Different from common MCMC methods that require determining the number of unknown as a fixed prior before inversion, trans-dimensional MCMC allows the flexibility for an automatic estimation of both the model complexity (e.g. the number of velocity interfaces) and the velocity-depth structure from the data. We first test the algorithm on synthetic data using four representative Moho models and then apply to an ocean bottom seismometer (OBS) data from the Mid-Atlantic Ocean. A 2-D finite-difference solution of an acoustic wave equation is used for data simulation at each iteration of MCMC search, for taking into account the lateral heterogeneities in the upper crust, which is constrained from travel time tomography and is kept unchanged during inversion; the 1-D model parameterization near Moho enables an efficient search of the trans-dimensional model space. Inversion results indicate that, with very little prior and the wide-aperture seismograms, the trans-dimensional FWI method is able to infer the posterior distribution of both the number of velocity interfaces and the velocity-depth model for a strong nonlinear problem, making the inversion a complete data-driven process. The distribution of interface matches the velocity discontinuities. We find that the Moho in the study area is a transition zone of 0.7 km, or a sharp boundary with velocities from around 7 km/s in the lower crust to 8 km/s of the upper mantle; both provide nearly identical waveform match for the field data. The ambiguity comes from the resolution limit of the band-limited seismic data and limited offset range for PmP arrivals.
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  • 91
    Publication Date: 2024-02-07
    Description: To constrain seismic anisotropy under and around the Alps in Europe, we study SKS shear wave splitting from the region densely covered by the AlpArray seismic network. We apply a technique based on measuring the splitting intensity, constraining well both the fast orientation and the splitting delay. Four years of teleseismic earthquake data were processed, from 723 temporary and permanent broad-band stations of the AlpArray deployment including ocean-bottom seismometers, providing a spatial coverage that is unprecedented. The technique is applied automatically (without human intervention), and it thus provides a reproducible image of anisotropic structure in and around the Alpine region. As in earlier studies, we observe a coherent rotation of fast axes in the western part of the Alpine chain, and a region of homogeneous fast orientation in the Central Alps. The spatial variation of splitting delay times is particularly interesting though. On one hand, there is a clear positive correlation with Alpine topography, suggesting that part of the seismic anisotropy (deformation) is caused by the Alpine orogeny. On the other hand, anisotropic strength around the mountain chain shows a distinct contrast between the Western and Eastern Alps. This difference is best explained by the more active mantle flow around the Western Alps. The new observational constraints, especially the splitting delay, provide new information on Alpine geodynamics.
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  • 92
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    GEOMAR
    In:  GEOMAR, Kiel, Germany, 7 pp.
    Publication Date: 2020-09-18
    Type: Report , NonPeerReviewed
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  • 93
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    GEOMAR
    In:  GEOMAR, Kiel, Germany, 2 pp.
    Publication Date: 2020-09-02
    Description: Maria S. Merian - MSM94 - SNAP Westlicher Subpolarer Atlantik 02.08.2020 - 06.09.2020
    Type: Report , NonPeerReviewed
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  • 94
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    GEOMAR
    In:  GEOMAR, 2 pp.
    Publication Date: 2020-11-20
    Description: 31.8.-6.9.2020
    Type: Report , NonPeerReviewed
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  • 95
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    GEOMAR
    In:  GEOMAR, 3 pp.
    Publication Date: 2020-11-20
    Description: 7.9.-13.9.2020
    Type: Report , NonPeerReviewed
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  • 96
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    GEOMAR
    In:  GEOMAR, 2 pp.
    Publication Date: 2020-11-20
    Description: 17.-23.8.2020
    Type: Report , NonPeerReviewed
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  • 97
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    GEOMAR
    In:  GEOMAR, 3 pp.
    Publication Date: 2020-11-20
    Description: 14.9.-20.9.2020
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  • 98
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    Institute of Marine Ecosystem and Fishery Science (IMF) | GEOMAR
    In:  Alkor-Berichte, AL540 . Institute of Marine Ecosystem and Fishery Science (IMF), GEOMAR, Kiel, Germany, 29 pp.
    Publication Date: 2020-12-03
    Description: 21.07 – 31.07.2020, Warnemünde (Germany) – Kiel (Germany) BALTEACH - 1
    Type: Report , NonPeerReviewed
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  • 99
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    GEOMAR
    In:  GEOMAR, 2 pp.
    Publication Date: 2020-11-20
    Description: 14. - 16.08.2020
    Type: Report , NonPeerReviewed
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  • 100
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    GEOMAR
    In:  GEOMAR, 1 pp.
    Publication Date: 2020-11-20
    Description: 28.9.-3.10.2020
    Type: Report , NonPeerReviewed
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