ALBERT — All Library Books, journals and Electronic Records Telegrafenberg

1

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Endosymbiont fixing C and N in termite-gut protist [Colloquium Paper] (2015)

Ohkuma, M., Noda, S., Hattori, S., Iida, T., Yuki, M., Starns, D., Inoue, J.-i., Darby, A. C., Hongoh, Y.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Symbiotic associations of cellulolytic eukaryotic protists and diverse bacteria are common in the gut microbial communities of termites. Besides cellulose degradation by the gut protists, reductive acetogenesis from H2 plus CO2 and nitrogen fixation by gut bacteria play crucial roles in the host termites’ nutrition by contributing to the energy...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

Print ISSN: 0027-8424

Electronic ISSN: 1091-6490

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CoRR hypothesis for genes in organelles [Colloquium Paper] (2015)

Allen, J. F.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Chloroplasts and mitochondria are subcellular bioenergetic organelles with their own genomes and genetic systems. DNA replication and transmission to daughter organelles produces cytoplasmic inheritance of characters associated with primary events in photosynthesis and respiration. The prokaryotic ancestors of chloroplasts and mitochondria were endosymbionts whose genes became copied to the...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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3

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Evolutionary consequences of heritable symbiosis [Colloquium Paper] (2015)

Bennett, G. M., Moran, N. A.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Many eukaryotes have obligate associations with microorganisms that are transmitted directly between generations. A model for heritable symbiosis is the association of aphids, a clade of sap-feeding insects, and Buchnera aphidicola, a gammaproteobacterium that colonized an aphid ancestor 150 million years ago and persists in almost all 5,000 aphid...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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4

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Inherited chimaerism [Colloquium Paper] (2015)

Ku, C., Nelson-Sathi, S., Roettger, M., Garg, S., Hazkani-Covo, E., Martin, W. F.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Endosymbiotic theory in eukaryotic-cell evolution rests upon a foundation of three cornerstone partners—the plastid (a cyanobacterium), the mitochondrion (a proteobacterium), and its host (an archaeon)—and carries a corollary that, over time, the majority of genes once present in the organelle genomes were relinquished to the chromosomes of the host...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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5

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Signatures of holobiont genome evolution [Colloquium Paper] (2015)

Wilson, A. C. C., Duncan, R. P.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: The role of symbiosis in bacterial symbiont genome evolution is well understood, yet the ways that symbiosis shapes host genomes or more particularly, host/symbiont genome coevolution in the holobiont is only now being revealed. Here, we identify three coevolutionary signatures that characterize holobiont genomes. The first signature, host/symbiont collaboration,...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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6

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Endosymbiosis and evolutionary theory [Colloquium Paper] (2015)

O'Malley, M. A.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Historically, conceptualizations of symbiosis and endosymbiosis have been pitted against Darwinian or neo-Darwinian evolutionary theory. In more recent times, Lynn Margulis has argued vigorously along these lines. However, there are only shallow grounds for finding Darwinian concepts or population genetic theory incompatible with endosymbiosis. But is population genetics sufficiently...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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7

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Symbiosis becoming permanent [Introductions] (2015)

Keeling, P. J., McCutcheon, J. P., Doolittle, W. F.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Some might think we already know enough about endosymbiosis and organelle origins, and that speakers at the colloquium Symbioses becoming permanent: The origins and evolutionary trajectories of organelles would have little new to say. Indeed, since the 1980s, the idea that the mitochondria and plastids (chloroplasts) of eukaryotic cells arose...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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8

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Early evolution of apicomplexan parasites [Colloquium Paper] (2015)

Janouškovec, J., Tikhonenkov, D. V., Burki, F., Howe, A. T., Kolisko, M., Mylnikov, A. P., Keeling, P. J.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Apicomplexans are a major lineage of parasites, including causative agents of malaria and toxoplasmosis. How such highly adapted parasites evolved from free-living ancestors is poorly understood, particularly because they contain nonphotosynthetic plastids with which they have a complex metabolic dependency. Here, we examine the origin of apicomplexan parasitism by...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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9

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Host-plastid coevolution in dinoflagellates [Colloquium Paper] (2015)

Dorrell, R. G., Howe, C. J.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: After their endosymbiotic acquisition, plastids become intimately connected with the biology of their host. For example, genes essential for plastid function may be relocated from the genomes of plastids to the host nucleus, and pathways may evolve within the host to support the plastid. In this review, we consider...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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10

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Min proteins and FtsZ in eukaryotic mitochondria [Colloquium Paper] (2015)

Leger, M. M., Petr F;, M., D;arsky, V., Eme, L., Vl D;ek,  C;estmir, Harding, T., Lang, B. F., Eliaš, M., Dole E;al, P., Roger, A. J.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Bacterial division initiates at the site of a contractile Z-ring composed of polymerized FtsZ. The location of the Z-ring in the cell is controlled by a system of three mutually antagonistic proteins, MinC, MinD, and MinE. Plastid division is also known to be dependent on homologs of these proteins,...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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11

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Major evolutionary transitions in individuality [Colloquium Paper] (2015)

West, S. A., Fisher, R. M., Gardner, A., Kiers, E. T.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: The evolution of life on earth has been driven by a small number of major evolutionary transitions. These transitions have been characterized by individuals that could previously replicate independently, cooperating to form a new, more complex life form. For example, archaea and eubacteria formed eukaryotic cells, and cells formed multicellular...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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12

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Reproduction, symbiosis, and the eukaryotic cell [Colloquium Paper] (2015)

Godfrey-Smith, P.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: This paper develops a conceptual framework for addressing questions about reproduction, individuality, and the units of selection in symbiotic associations, with special attention to the origin of the eukaryotic cell. Three kinds of reproduction are distinguished, and a possible evolutionary sequence giving rise to a mitochondrion-containing eukaryotic cell from...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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13

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Mosaic nature of the mitochondrial proteome [Colloquium Paper] (2015)

Gray, M. W.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Comparative studies of the mitochondrial proteome have identified a conserved core of proteins descended from the α-proteobacterial endosymbiont that gave rise to the mitochondrion and was the source of the mitochondrial genome in contemporary eukaryotes. A surprising result of phylogenetic analyses is the relatively small proportion (10–20%) of the mitochondrial...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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14

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Why mitochondria need a genome [Colloquium Paper] (2015)

Bȷorkholm, P., Harish, A., Hagstrom, E., Ernst, A. M., Andersson, S. G. E.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Mitochondria are energy-producing organelles in eukaryotic cells considered to be of bacterial origin. The mitochondrial genome has evolved under selection for minimization of gene content, yet it is not known why not all mitochondrial genes have been transferred to the nuclear genome. Here, we predict that hydrophobic membrane proteins...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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15

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Mitochondria and sex ratio distortion [Colloquium Paper] (2015)

Perlman, S. J., Hodson, C. N., Hamilton, P. T., Opit, G. P., Gowen, B. E.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: In virtually all multicellular eukaryotes, mitochondria are transmitted exclusively through one parent, usually the mother. In this short review, we discuss some of the major consequences of uniparental transmission of mitochondria, including deleterious effects in males and selection for increased transmission through females. Many of these consequences, particularly sex...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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16

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Mitochondrial vs plastid genome architecture [Colloquium Paper] (2015)

Smith, D. R., Keeling, P. J.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Mitochondrial and plastid genomes show a wide array of architectures, varying immensely in size, structure, and content. Some organelle DNAs have even developed elaborate eccentricities, such as scrambled coding regions, nonstandard genetic codes, and convoluted modes of posttranscriptional modification and editing. Here, we compare and contrast the breadth of...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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17

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Major transitions in evolution revised [Colloquium Paper] (2015)

Szathmary, E.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: The impressive body of work on the major evolutionary transitions in the last 20 y calls for a reconstruction of the theory although a 2D account (evolution of informational systems and transitions in individuality) remains. Significant advances include the concept of fraternal and egalitarian transitions (lower-level units like and unlike,...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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18

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Genome expansion in an endosymbiont [Colloquium Paper] (2015)

Campbell, M. A., Van Leuven, J. T., Meister, R. C., Carey, K. M., Simon, C., McCutcheon, J. P.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Comparative genomics from mitochondria, plastids, and mutualistic endosymbiotic bacteria has shown that the stable establishment of a bacterium in a host cell results in genome reduction. Although many highly reduced genomes from endosymbiotic bacteria are stable in gene content and genome structure, organelle genomes are sometimes characterized by dramatic structural...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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19

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Role of transporters in endosymbiosis [Colloquium Paper] (2015)

Karkar, S., Facchinelli, F., Price, D. C., Weber, A. P. M., Bhattacharya, D.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: The origin of oxygenic photosynthesis in the Archaeplastida common ancestor was foundational for the evolution of multicellular life. It is very likely that the primary endosymbiosis that explains plastid origin relied initially on the establishment of a metabolic connection between the host cell and captured cyanobacterium. We posit that these...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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20

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Evolution of plant mtDNA by chromosome gain/loss [Colloquium Paper] (2015)

Wu, Z., Cuthbert, J. M., Taylor, D. R., Sloan, D. B.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Across eukaryotes, mitochondria exhibit staggering diversity in genomic architecture, including the repeated evolution of multichromosomal structures. Unlike in the nucleus, where mitosis and meiosis ensure faithful transmission of chromosomes, the mechanisms of inheritance in fragmented mitochondrial genomes remain mysterious. Multichromosomal mitochondrial genomes have recently been found in multiple species...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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21

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Eukaryogenesis, how special really? [Colloquium Paper] (2015)

Booth, A., Doolittle, W. F.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Eukaryogenesis is widely viewed as an improbable evolutionary transition uniquely affecting the evolution of life on this planet. However, scientific and popular rhetoric extolling this event as a singularity lacks rigorous evidential and statistical support. Here, we question several of the usual claims about the specialness of eukaryogenesis, focusing...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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22

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Evolutionary signals of symbiotic persistence [Colloquium Paper] (2015)

Werner, G. D. A., Cornwell, W. K., Cornelissen, J. H. C., Kiers, E. T.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Understanding the origins and evolutionary trajectories of symbiotic partnerships remains a major challenge. Why are some symbioses lost over evolutionary time whereas others become crucial for survival? Here, we use a quantitative trait reconstruction method to characterize different evolutionary stages in the ancient symbiosis between legumes (Fabaceae) and nitrogen-fixing...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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23

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ATP synthase essential in malaria life cycle [Colloquium Paper] (2015)

Sturm, A., Mollard, V., Cozijnsen, A., Goodman, C. D., McFadden, G. I.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: Mitochondrial ATP synthase is driven by chemiosmotic oxidation of pyruvate derived from glycolysis. Blood-stage malaria parasites eschew chemiosmosis, instead relying almost solely on glycolysis for their ATP generation, which begs the question of whether mitochondrial ATP synthase is necessary during the blood stage of the parasite life cycle. We knocked...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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24

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Rethinking evolutionary individuality [Colloquium Paper] (2015)

Ereshefsky, M., Pedroso, M.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: This paper considers whether multispecies biofilms are evolutionary individuals. Numerous multispecies biofilms have characteristics associated with individuality, such as internal integrity, division of labor, coordination among parts, and heritable adaptive traits. However, such multispecies biofilms often fail standard reproductive criteria for individuality: they lack reproductive bottlenecks, are comprised of...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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Endosymbiosis and eukaryotic genome evolution [Colloquium Paper] (2015)

Archibald, J. M.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2015-08-19

Description: The endosymbiotic origin of plastids from cyanobacteria was a landmark event in the history of eukaryotic life. Subsequent to the evolution of primary plastids, photosynthesis spread from red and green algae to unrelated eukaryotes by secondary and tertiary endosymbiosis. Although the movement of cyanobacterial genes from endosymbiont to host...

Keywords: Symbioses Becoming Permanent: The Origins and Evolutionary Trajectories of Organelles Sackler Colloq

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