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  • Numerical modeling  (12)
  • 2°C warming
  • 42.75
  • Disturbance
  • Eubalaena glacialis
  • Fisheries
  • Polymer and Materials Science
  • American Geophysical Union  (13)
  • Ecological Society of America  (6)
  • INSTM, Institut national des sciences et technologies de la mer  (1)
  • 2010-2014  (20)
  • 1950-1954
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  • 1
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    Suivi de l’activité de la pêche hauturière dans le gouvernorat de Medenine (sud de la Tunisie). (2013)
    INSTM, Institut national des sciences et technologies de la mer | Tunis
    Details
    Publication Date: 2021-05-19
    Description: Ce travail représente une contribution à l'étude de l'activité de pêche hauturière dans le gouvernorat de Médenine, particulièrement, au niveau du port de Zarzis ; durant la période (juin 2005-juin 2006). Il consiste à réaliser, grâce à des enquêtes menées au port, deux types d'analyses : une analyse quantitative afin de déterminer les débarquements saisonniers moyens des espèces les plus débarquées par la pêche hauturière et une analyse qualitative pour établir les structures démographiques des espèces les plus exploitées dans la région. Les résultats obtenus ont montré que, durant la période d'étude, les principales espèces débarquées par la pêche hauturière sont la sardinelle, le maquereau, le saurel, le rouget blanc, le pageot, la thonine, la seiche et la crevette royale. En examinant les débarquements saisonniers moyens des espèces les plus débarquées par type de pêche, nous avons remarqué que deux ou trois espèces dominent pour chaque saison. De plus, l'analyse des structures démographique des apports a montré que la majorité des individus débarqués sont matures, à l’exception du maquereau dont les captures sont constituées d’individus immatures, surtout pendant les saisons d’été et d’automne.
    Description: This work represents a contribution to the study of the offshore fishing activity in the governorate of Medenine, particularly at the port of Zarzis, during the period (june 2005-june 2006. It is to realize, through surveys conducted at the port, two types of analyzes: a quantitative analysis to determine the average seasonal landings of most landed species by fishing offshore units and qualitative analysis to determine the demographic structure of the most exploited species in the region. The obtained results showed that during the period of study, the main landed species by offshore fishing are sardinella, mackerel, horse mackerel, white mullet, sea bream, skipjack tuna, cuttlefish and the caramote prawn. By examining the average seasonal landings of the most landed species, we noticed that, for each season, two or three species dominate. Furthermore, analysis of demographic structures of the landings showed that the majority of landed individuals are mature, with the exception of mackerel catches which are composed of immature individuals, especially during the seasons of summer and autumn.
    Description: Published
    Description: analyse qualitative
    Description: pêche hauturière
    Keywords: Quality analysis ; Offshore ; Fisheries
    Repository Name: AquaDocs
    Type: Proceedings Paper , Refereed , Meeting abstract
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  • 2
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    Habitat damage, marine reserves, and the value of spatial management (2013)
    Ecological Society of America
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Ecological Society of America, 2013. This article is posted here by permission of Ecological Society of America for personal use, not for redistribution. The definitive version was published in Ecological Applications 23 (2013): 959–971, doi:10.1890/12-0447.1.
    Description: The biological benefits of marine reserves have garnered favor in the conservation community, but “no-take” reserve implementation is complicated by the economic interests of fishery stakeholders. There are now a number of studies examining the conditions under which marine reserves can provide both economic and ecological benefits. A potentially important reality of fishing that these studies overlook is that fishing can damage the habitat of the target stock. Here, we construct an equilibrium bioeconomic model that incorporates this habitat damage and show that the designation of marine reserves, coupled with the implementation of a tax on fishing effort, becomes both biologically and economically favorable as habitat sensitivity increases. We also study the effects of varied degrees of spatial control on fisheries management. Together, our results provide further evidence for the potential monetary and biological value of spatial management, and the possibility of a mutually beneficial resolution to the fisherman–conservationist marine reserve designation dilemma.
    Description: M. G. Neubert acknowledges the support of the National Science Foundation (DMS-0532378, OCE-1031256) and a Thomas B. Wheeler Award for Ocean Science and Society. H. V. Moeller acknowledges support from a National Science Foundation Graduate Research Fellowship. This research is based in part on work supported by Award No. USA 00002 made by King Abdullah University of Science and Technology (KAUST).
    Keywords: Bioeconomics ; Destructive fishing practices ; Fisheries ; Habitat damage ; Marine protected areas ; Marine reserves ; Optimal control ; Optimal harvesting ; Spatial management
    Repository Name: Woods Hole Open Access Server
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  • 3
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    Recovery from disturbance requires resynchronization of ecosystem nutrient cycles (2013)
    Ecological Society of America
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Ecological Society of America, 2013. This article is posted here by permission of Ecological Society of America for personal use, not for redistribution. The definitive version was published in Ecological Applications 23 (2013): 621–642, doi:10.1890/12-0751.1.
    Description: Nitrogen (N) and phosphorus (P) are tightly cycled in most terrestrial ecosystems, with plant uptake more than 10 times higher than the rate of supply from deposition and weathering. This near-total dependence on recycled nutrients and the stoichiometric constraints on resource use by plants and microbes mean that the two cycles have to be synchronized such that the ratio of N:P in plant uptake, litterfall, and net mineralization are nearly the same. Disturbance can disrupt this synchronization if there is a disproportionate loss of one nutrient relative to the other. We model the resynchronization of N and P cycles following harvest of a northern hardwood forest. In our simulations, nutrient loss in the harvest is small relative to postharvest losses. The low N:P ratio of harvest residue results in a preferential release of P and retention of N. The P release is in excess of plant requirements and P is lost from the active ecosystem cycle through secondary mineral formation and leaching early in succession. Because external P inputs are small, the resynchronization of the N and P cycles later in succession is achieved by a commensurate loss of N. Through succession, the ecosystem undergoes alternating periods of N limitation, then P limitation, and eventually co-limitation as the two cycles resynchronize. However, our simulations indicate that the overall rate and extent of recovery is limited by P unless a mechanism exists either to prevent the P loss early in succession (e.g., P sequestration not stoichiometrically constrained by N) or to increase the P supply to the ecosystem later in succession (e.g., biologically enhanced weathering). Our model provides a heuristic perspective from which to assess the resynchronization among tightly cycled nutrients and the effect of that resynchronization on recovery of ecosystems from disturbance.
    Description: This material is based upon work supported by the National Science Foundation under Grants 0108960, 0716067, 0949420, 0949324, 0949317, and 0949854.
    Keywords: Co-limitation ; Disturbance ; Ecosystem succession ; N:P ratio ; Nutrient cycles ; Nutrient limitation ; Resource optimization ; Stoichiometric constraints ; Terrestrial ecosystem cycling
    Repository Name: Woods Hole Open Access Server
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  • 4
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    A model of the Arctic Ocean carbon cycle (2012)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C12020, doi:10.1029/2011JC006998.
    Description: A three dimensional model of Arctic Ocean circulation and mixing, with a horizontal resolution of 18 km, is overlain by a biogeochemical model resolving the physical, chemical and biological transport and transformations of phosphorus, alkalinity, oxygen and carbon, including the air-sea exchange of dissolved gases and the riverine delivery of dissolved organic carbon. The model qualitatively captures the observed regional and seasonal trends in surface ocean PO4, dissolved inorganic carbon, total alkalinity, and pCO2. Integrated annually, over the basin, the model suggests a net annual uptake of 59 Tg C a−1, within the range of published estimates based on the extrapolation of local observations (20–199 Tg C a−1). This flux is attributable to the cooling (increasing solubility) of waters moving into the basin, mainly from the subpolar North Atlantic. The air-sea flux is regulated seasonally and regionally by sea-ice cover, which modulates both air-sea gas transfer and the photosynthetic production of organic matter, and by the delivery of riverine dissolved organic carbon (RDOC), which drive the regional contrasts in pCO2 between Eurasian and North American coastal waters. Integrated over the basin, the delivery and remineralization of RDOC reduces the net oceanic CO2 uptake by ~10%.
    Description: This study has been carried out as part of ECCO2 and SASS (Synthesis of the Arctic System Science) projects funded by NASA and NSF, respectively. MM and MJF are grateful for support from the National Science Foundation (ARC-0531119 and ARC-0806229) for financial support. MM also acknowledges NASA for providing computer time, the use of the computing facilities at NAS center and also the Scripps post-doctoral program for further financial support that helped to complete the manuscript. RMK also acknowledges NOAA for support (NA08OAR4310820 and NA08OAR4320752).
    Description: 2012-06-15
    Keywords: Air-sea gas exchange ; Biogeochemical cycles ; Land-ocean coupling ; Numerical modeling ; Ocean carbon cycle ; Polar oceans
    Repository Name: Woods Hole Open Access Server
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  • 5
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    Tracer transport timescales and the observed Atlantic-Pacific lag in the timing of the Last Termination (2012)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Paleoceanography 27 (2012): PA3225, doi:10.1029/2011PA002273.
    Description: The midpoint of the Last Termination occurred 4,000 years earlier in the deep Atlantic than the deep Pacific according to a pair of benthic foraminiferal δ18O records, seemingly implying an internal circulation shift because the lag is much longer than the deep radiocarbon age. Here a scenario where the lag is instead caused by regional surface boundary condition changes, delays due to oceanic transit timescales, and the interplay between temperature and seawater δ18O (δ18Ow) is quantified with a tracer transport model of the modern-day ocean circulation. Using an inverse method with individual Green functions for 2,806 surface sources, a time history of surface temperature and δ18Ow is reconstructed for the last 30,000 years that is consistent with the foraminiferal oxygen-isotope data, Mg/Ca-derived deep temperature, and glacial pore water records. Thus, in the case that the ocean circulation was relatively unchanged between glacial and modern times, the interbasin lag could be explained by the relatively late local glacial maximum around Antarctica where surface δ18Ow continues to rise even after the North Atlantic δ18Ow falls. The arrival of the signal of the Termination is delayed at the Pacific core site due to the destructive interference of the still-rising Antarctic signal and the falling North Atlantic signal. This scenario is only possible because the ocean is not a single conveyor belt where all waters at the Pacific core site previously passed the Atlantic core site, but instead the Pacific core site is bathed more prominently by waters with a direct Antarctic source.
    Description: G.G. is supported by NSF grant OIA-1124880 and the WHOI Arctic Research Initiative.
    Description: 2013-03-06
    Keywords: Deglaciation ; Foraminiferal data ; Inverse methods ; Numerical modeling ; Oxygen-18 ; Tracers
    Repository Name: Woods Hole Open Access Server
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  • 6
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    Absolute probability estimates of lethal vessel strikes to North Atlantic right whales in Roseway Basin, Scotian Shelf (2012)
    Ecological Society of America
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Ecological Society of America, 2012. This article is posted here by permission of Ecological Society of America for personal use, not for redistribution. The definitive version was published in Ecological Applications 22 (2012): 2021–2033, doi:10.1890/11-1841.1.
    Description: Vessel strikes are the primary source of known mortality for the endangered North Atlantic right whale (Eubalaena glacialis). Multi-institutional efforts to reduce mortality associated with vessel strikes include vessel-routing amendments such as the International Maritime Organization voluntary “area to be avoided” (ATBA) in the Roseway Basin right whale feeding habitat on the southwestern Scotian Shelf. Though relative probabilities of lethal vessel strikes have been estimated and published, absolute probabilities remain unknown. We used a modeling approach to determine the regional effect of the ATBA, by estimating reductions in the expected number of lethal vessel strikes. This analysis differs from others in that it explicitly includes a spatiotemporal analysis of real-time transits of vessels through a population of simulated, swimming right whales. Combining automatic identification system (AIS) vessel navigation data and an observationally based whale movement model allowed us to determine the spatial and temporal intersection of vessels and whales, from which various probability estimates of lethal vessel strikes are derived. We estimate one lethal vessel strike every 0.775–2.07 years prior to ATBA implementation, consistent with and more constrained than previous estimates of every 2–16 years. Following implementation, a lethal vessel strike is expected every 41 years. When whale abundance is held constant across years, we estimate that voluntary vessel compliance with the ATBA results in an 82% reduction in the per capita rate of lethal strikes; very similar to a previously published estimate of 82% reduction in the relative risk of a lethal vessel strike. The models we developed can inform decision-making and policy design, based on their ability to provide absolute, population-corrected, time-varying estimates of lethal vessel strikes, and they are easily transported to other regions and situations.
    Description: This research was supported by the Environment Canada Habitat Stewardship Programme, the Canadian Whale Institute, and R. K. Smedbol (St. Andrews Biological Station).
    Keywords: Absolute probability estimates ; Endangered whales ; Eubalaena glacialis ; Marine area closure ; Mortality reduction ; North Atlantic right whale ; Roseway Basin, Scotian Shelf ; Vessel routing ; Vessel strike
    Repository Name: Woods Hole Open Access Server
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  • 7
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    Antarctic penguin response to habitat change as Earth's troposphere reaches 2°C above preindustrial levels (2011)
    Ecological Society of America
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Ecological Society of America, 2010. This article is posted here by permission of Ecological Society of America for personal use, not for redistribution. The definitive version was published in Ecological Monographs 80 (2010): 49–66, doi:10.1890/08-2289.1.
    Description: We assess the response of pack ice penguins, Emperor (Aptenodytes forsteri) and Adélie (Pygoscelis adeliae), to habitat variability and, then, by modeling habitat alterations, the qualitative changes to their populations, size and distribution, as Earth's average tropospheric temperature reaches 2°C above preindustrial levels (ca. 1860), the benchmark set by the European Union in efforts to reduce greenhouse gases. First, we assessed models used in the Intergovernmental Panel on Climate Change Fourth Assessment Report (AR4) on penguin performance duplicating existing conditions in the Southern Ocean. We chose four models appropriate for gauging changes to penguin habitat: GFDL-CM2.1, GFDL-CM2.0, MIROC3.2(hi-res), and MRI-CGCM2.3.2a. Second, we analyzed the composited model ENSEMBLE to estimate the point of 2°C warming (2025–2052) and the projected changes to sea ice coverage (extent, persistence, and concentration), sea ice thickness, wind speeds, precipitation, and air temperatures. Third, we considered studies of ancient colonies and sediment cores and some recent modeling, which indicate the (space/time) large/centennial-scale penguin response to habitat limits of all ice or no ice. Then we considered results of statistical modeling at the temporal interannual-decadal scale in regard to penguin response over a continuum of rather complex, meso- to large-scale habitat conditions, some of which have opposing and others interacting effects. The ENSEMBLE meso/decadal-scale output projects a marked narrowing of penguins' zoogeographic range at the 2°C point. Colonies north of 70° S are projected to decrease or disappear: 50% of Emperor colonies (40% of breeding population) and 75% of Adélie colonies (70% of breeding population), but limited growth might occur south of 73° S. Net change would result largely from positive responses to increase in polynya persistence at high latitudes, overcome by decreases in pack ice cover at lower latitudes and, particularly for Emperors, ice thickness. Adélie Penguins might colonize new breeding habitat where concentrated pack ice diverges and/or disintegrating ice shelves expose coastline. Limiting increase will be decreased persistence of pack ice north of the Antarctic Circle, as this species requires daylight in its wintering areas. Adélies would be affected negatively by increasing snowfall, predicted to increase in certain areas owing to intrusions of warm, moist marine air due to changes in the Polar Jet Stream.
    Description: This project was funded by the World Wildlife Fund and the National Science Foundation, NSF grant OPP-0440643 (D. G. Ainley), and a Marie-Curie Fellowship to S. Jenouvrier.
    Keywords: Adelie penguin ; Antarctica ; Climate change ; Climate modeling ; Emperor Penguin ; Habitat optimum ; Sea ice ; 2°C warming
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  • 8
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    Wave-angle control of delta evolution (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 38 (2011): L13405, doi:10.1029/2011GL047630.
    Description: Wave-influenced deltas, with large-scale arcuate shapes and demarcated beach ridge complexes, often display an asymmetrical form about their river channel. Here, we use a numerical model to demonstrate that the angles from which waves approach a delta can have a first-order influence upon its plan-view morphologic evolution and sedimentary architecture. The directional spread of incoming waves plays a dominant role over fluvial sediment discharge in controlling the width of an active delta lobe, which in turn affects the characteristic rates of delta progradation. Oblique wave approach (and a consequent net alongshore sediment transport) can lead to the development of morphologic asymmetry about the river in a delta's plan-view form. This plan-form asymmetry can include the development of discrete breaks in shoreline orientation and the appearance of self-organized features arising from shoreline instability along the downdrift delta flank, such as spits and migrating shoreline sand waves—features observed on natural deltas. Somewhat surprisingly, waves approaching preferentially from one direction tend to increase sediment deposition updrift of the river. This ‘morphodynamic groin effect’ occurs when the delta's plan-form aspect ratio is sufficiently large such that the orientation of the shoreline on the downdrift flank is rotated past the angle of maximum alongshore sediment transport, resulting in preferential redirection of fluvial sediment updrift of the river mouth.
    Description: This research was supported by NSF grants EAR‐0952146 and OCE‐0623766, the Exxon‐Mobil Upstream Research Company, and the WHOI‐USGS postdoctoral fellowship.
    Keywords: Depositional asymmetry ; Large-scale coastal evolution ; Numerical modeling ; Plan-view delta evolution
    Repository Name: Woods Hole Open Access Server
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  • 9
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    Heterotrophic respiration in disturbed forests : a review with examples from North America (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): G00K04, doi:10.1029/2010JG001495.
    Description: Heterotrophic respiration (RH) is a major process releasing carbon to the atmosphere and is essential to understanding carbon dynamics in terrestrial ecosystems. Here we review what is known about this flux as related to forest disturbance using examples from North America. The global RH flux from soils has been estimated at 53–57 Pg C yr−1, but this does not include contributions from other sources (i.e., dead wood, heart-rots). Disturbance-related inputs likely account for 20–50% of all RH losses in forests, and disturbances lead to a reorganization of ecosystem carbon pools that influences how RH changes over succession. Multiple controls on RH related to climate, the material being decomposed, and the decomposers involved have been identified, but how each potentially interacts with disturbance remains an open question. An emerging paradigm of carbon dynamics suggests the possibility of multiple periods of carbon sinks and sources following disturbance; a large contributing factor is the possibility that postdisturbance RH does not always follow the monotonic decline assumed in the classic theory. Without a better understanding and modeling of RH and its controlling factors, it will be difficult to estimate, forecast, understand, and manage carbon balances of regions in which disturbance frequency and severity are changing. Meeting this challenge will require (1) improved field data on processes and stores, (2) an improved understanding of the physiological and environmental controls of RH, and (3) a more formal analysis of how model structure influences the RH responses that can be predicted.
    Description: Support was provided by the U.S. Geologic Survey and the Kaye and Ward Richardson Endowment.
    Keywords: Carbon dynamics ; Decomposition ; Disturbance ; Ecosystems
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  • 10
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    Fire increases invasive spread of Molinia caerulea mainly through changes in demographic parameters (2011)
    Ecological Society of America
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Ecological Society of America, 2005. This article is posted here by permission of Ecological Society of America for personal use, not for redistribution. The definitive version was published in Ecological Applications 15 (2005): 2097–2108, doi:10.1890/04-1762.
    Description: We investigated the effects of fire on population growth rate and invasive spread of the perennial tussock grass Molinia caerulea. During the last decades, this species has invaded heathland communities in Western Europe, replacing typical heathland species such as Calluna vulgaris and Erica tetralix. M. caerulea is considered a major threat to heathland conservation. In 1996, a large and unintended fire destroyed almost one-third of the Kalmthoutse Heide, a large heathland area in northern Belgium. To study the impact of this fire on the population dynamics and invasive spread of M. caerulea, permanent monitoring plots were established both in burned and unburned heathland. The fate of each M. caerulea individual in these plots was monitored over four years (1997–2000). Patterns of seed dispersal were inferred from a seed germination experiment using soil cores sampled one month after seed rain at different distances from seed-producing plants. Based on these measures, we calculated projected rates of spread for M. caerulea in burned and unburned heathland. Elasticity and sensitivity analyses were used to determine vital rates that contributed most to population growth rate, and invasion speed. Invasion speed was, on average, three times larger in burned compared to unburned plots. Dispersal distances on the other hand, were not significantly different between burned and unburned plots indicating that differences in invasive spread were mainly due to differences in demography. Elasticities for fecundity and growth of seedlings and juveniles were higher for burned than for unburned plots, whereas elasticities for survival were higher in unburned plots. Finally, a life table response experiment (LTRE) analysis revealed that the effect of fire was mainly contributed by increases in sexual reproduction (seed production and germination) and growth of seedlings and juveniles. Our results clearly showed increased invasive spread of M. caerulea after fire, and call for active management guidelines to prevent further encroachment of the species and to reduce the probability of large, accidental fires in the future. Mowing of resprouted plants before flowering is the obvious management tactic to halt massive invasive spread of the species after fire.
    Description: This work was supported by the Flemish Fund for Scientific Research (FWO) to HJ, the U.S. National Science foundation (DEB-0235692, OCE-0083976), and the U.S. Environmental Protection Agency (R-8290891) to MGN.
    Keywords: Disturbance ; Elasticity ; Fire ; Integrodifference equations ; Invasive spread ; LTRE ; Matrix population model ; Molinia caerulea ; Sensitivity
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  • 11
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    A model for energetics and bioaccumulation in marine mammals with applications to the right whale (2011)
    Ecological Society of America
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © Ecological Society of America, 2007. This article is posted here by permission of Ecological Society of America for personal use, not for redistribution. The definitive version was published in Ecological Applications 17 (2007): 2233–2250, doi:10.1890/06-0426.1.
    Description: We present a dynamic energy budget (DEB) model for marine mammals, coupled with a pharmacokinetic model of a lipophilic persistent toxicant. Inputs to the model are energy availability and lipid-normalized toxicant concentration in the environment. The model predicts individual growth, reproduction, bioaccumulation, and transfer of energy and toxicant from mothers to their young. We estimated all model parameters for the right whale; with these parameters, reduction in energy availability increases the age at first parturition, increases intervals between reproductive events, reduces the organisms' ability to buffer seasonal fluctuations, and increases its susceptibility to temporal shifts in the seasonal peak of energy availability. Reduction in energy intake increases bioaccumulation and the amount of toxicant transferred from mother to each offspring. With high energy availability, the toxicant load of offspring decreases with birth order. Contrary to expectations, this ordering may be reversed with lower energy availability. Although demonstrated with parameters for the right whale, these relationships between energy intake and energetics and pharmacokinetics of organisms are likely to be much more general. Results specific to right whales include energy assimilation estimates for the North Atlantic and southern right whale, influences of history of energy availability on reproduction, and a relationship between ages at first parturition and calving intervals. Our model provides a platform for further analyses of both individual and population responses of marine mammals to pollution, and to changes in energy availability, including those likely to arise through climate change.
    Description: This research was supported by the David and Lucile Packard Foundation, the U.S. National Science Foundation (DEB-9973518 and OCE-0083976), the U.S. Environmental Protection Agency (R-82908901-0), NOAA grant NA03NMF4720491, and the WHOI/MIT Joint Program in Oceanography.
    Keywords: Bioaccumulation ; Dynamic energy budget (DEB) ; Model ; Energy intake and utilization ; Eubalaena glacialis ; Lipophilic ; Marine mammal ; North Atlantic right whale growth and reproduction ; PCB ; Toxicant transfer
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  • 12
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    Complex mean circulation over the inner shelf south of Martha's Vineyard revealed by observations and a high-resolution model (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C10036, doi:10.1029/2011JC007035.
    Description: Inner-shelf circulation is governed by the interaction between tides, baroclinic forcing, winds, waves, and frictional losses; the mean circulation ultimately governs exchange between the coast and ocean. In some cases, oscillatory tidal currents interact with bathymetric features to generate a tidally rectified flow. Recent observational and modeling efforts in an overlapping domain centered on the Martha's Vineyard Coastal Observatory (MVCO) provided an opportunity to investigate the spatial and temporal complexity of circulation on the inner shelf. ADCP and surface radar observations revealed a mean circulation pattern that was highly variable in the alongshore and cross-shore directions. Nested modeling incrementally improved representation of the mean circulation as grid resolution increased and indicated tidal rectification as the generation mechanism of a counter-clockwise gyre near the MVCO. The loss of model skill with decreasing resolution is attributed to insufficient representation of the bathymetric gradients (Δh/h), which is important for representing nonlinear interactions between currents and bathymetry. The modeled momentum balance was characterized by large spatial variability of the pressure gradient and horizontal advection terms over short distances, suggesting that observed inner-shelf momentum balances may be confounded. Given the available observational and modeling data, this work defines the spatially variable mean circulation and its formation mechanism—tidal rectification—and illustrates the importance of model resolution for resolving circulation and constituent exchange near the coast. The results of this study have implications for future observational and modeling studies near the MVCO and other inner-shelf locations with alongshore bathymetric variability.
    Description: Funding was provided through the Office of Naval Research Ripples DRI, U.S. Geological Survey Coastal and Marine Geology Program, and National Science Foundation.
    Keywords: Coastal and nearshore circulation ; Grid resolution ; Nesting ; Numerical modeling ; Tidal rectification
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  • 13
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    Magmatic and tectonic extension at mid-ocean ridges : 1. Controls on fault characteristics (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2008. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 9 (2008): Q08O10, doi:10.1029/2008GC001965.
    Description: We use 2-D numerical models to explore the thermal and mechanical effects of magma intrusion on fault initiation and growth at slow and intermediate spreading ridges. Magma intrusion is simulated by widening a vertical column of model elements located within the lithosphere at a rate equal to a fraction, M, of the total spreading rate (i.e., M = 1 for fully magmatic spreading). Heat is added in proportion to the rate of intrusion to simulate the thermal effects of magma crystallization and the injection of hot magma into the crust. We examine a range of intrusion rates and axial thermal structures by varying M, spreading rate, and the efficiency of crustal cooling by conduction and hydrothermal circulation. Fault development proceeds in a sequential manner, with deformation focused on a single active normal fault whose location alternates between the two sides of the ridge axis. Fault spacing and heave are primarily sensitive to M and secondarily sensitive to axial lithosphere thickness and the rate that the lithosphere thickens with distance from the axis. Contrary to what is often cited in the literature, but consistent with prior results of mechanical modeling, we find that thicker axial lithosphere tends to reduce fault spacing and heave. In addition, fault spacing and heave are predicted to increase with decreasing rates of off-axis lithospheric thickening. The combination of low M, particularly when M approaches 0.5, as well as a reduced rate of off-axis lithospheric thickening produces long-lived, large-offset faults, similar to oceanic core complexes. Such long-lived faults produce a highly asymmetric axial thermal structure, with thinner lithosphere on the side with the active fault. This across-axis variation in thermal structure may tend to stabilize the active fault for longer periods of time and could concentrate hydrothermal circulation in the footwall of oceanic core complexes.
    Description: Funding for this research was provided by NSF grants OCE-0327018 (M.D.B.), OCE-0548672 (M.D.B.), OCE- 0327051 (G.I.), and OCE-03-51234 (G.I.).
    Keywords: Mid-ocean ridges ; Faulting ; Magmatism ; Numerical modeling
    Repository Name: Woods Hole Open Access Server
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  • 14
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    Impact of circulation on export production, dissolved organic matter, and dissolved oxygen in the ocean : results from Phase II of the Ocean Carbon-cycle Model Intercomparison Project (OCMIP-2) (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 21 (2007): GB3007, doi:10.1029/2006GB002857.
    Description: Results are presented of export production, dissolved organic matter (DOM) and dissolved oxygen simulated by 12 global ocean models participating in the second phase of the Ocean Carbon-cycle Model Intercomparison Project. A common, simple biogeochemical model is utilized in different coarse-resolution ocean circulation models. The model mean (±1σ) downward flux of organic matter across 75 m depth is 17 ± 6 Pg C yr−1. Model means of globally averaged particle export, the fraction of total export in dissolved form, surface semilabile dissolved organic carbon (DOC), and seasonal net outgassing (SNO) of oxygen are in good agreement with observation-based estimates, but particle export and surface DOC are too high in the tropics. There is a high sensitivity of the results to circulation, as evidenced by (1) the correlation of surface DOC and export with circulation metrics, including chlorofluorocarbon inventory and deep-ocean radiocarbon, (2) very large intermodel differences in Southern Ocean export, and (3) greater export production, fraction of export as DOM, and SNO in models with explicit mixed layer physics. However, deep-ocean oxygen, which varies widely among the models, is poorly correlated with other model indices. Cross-model means of several biogeochemical metrics show better agreement with observation-based estimates when restricted to those models that best simulate deep-ocean radiocarbon. Overall, the results emphasize the importance of physical processes in marine biogeochemical modeling and suggest that the development of circulation models can be accelerated by evaluating them with marine biogeochemical metrics.
    Description: R. G. N. and J. L. S. acknowledge the support of NASA grants NAG5-6451 and NAG5-6591, respectively, as part of the JGOFS Synthesis and Modeling Program. G. K. P. and F. J. acknowledge support by the Swiss National Science Foundation. European contributions were supported by the EU GOSAC Project (ENV4-CT97- 0495).
    Keywords: Export production ; Numerical modeling ; Ocean circulation
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  • 15
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    Sorted bed forms as self-organized patterns : 2. Complex forcing scenarios (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 112 (2007): F03016, doi:10.1029/2006JF000666.
    Description: We employ a numerical model to study the development of sorted bed forms under a variety of hydrodynamic and sedimentary conditions. Results indicate that increased variability in wave height decreases the growth rate of the features and can potentially give rise to complicated, a priori unpredictable, behavior. This happens because the system responds to a change in wave characteristics by attempting to self-organize into a patterned seabed of different geometry and spacing. The new wavelength might not have enough time to emerge before a new change in wave characteristics occurs, leading to less regular seabed configurations. The new seabed configuration is also highly dependent on the preexisting morphology, which further limits the possibility of predicting future behavior. For the same reasons, variability in the mean current magnitude and direction slows down the growth of features and causes patterns to develop that differ from classical sorted bed forms. Spatial variability in grain size distribution and different types of net sediment aggradation/degradation can also result in the development of sorted bed forms characterized by a less regular shape. Numerical simulations qualitatively agree with observed geometry (spacing and height) of sorted bed forms. Also in agreement with observations is that at shallower depths, sorted bed forms are more likely to be affected by changes in the forcing conditions, which might also explain why, in shallow waters, sorted bed forms are described as ephemeral features. Finally, simulations indicate that the different sorted bed form shapes and patterns observed in the field might not necessarily be related to diverse physical mechanisms. Instead, variations in sorted bed form characteristics may result from variations in local hydrodynamic and/or sedimentary conditions.
    Description: G.C., M.O.G., and T.M.H. acknowledge funding from the (New Zealand) Foundation for Research, Science and Technology (contract C01X0401). The National Science Foundation (OCE0452178) supported A.B.M.
    Keywords: Self-organization ; Sorted bed forms ; Numerical modeling
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  • 16
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    Investigation of the summer Kara Sea circulation employing a variational data assimilation technique (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 112 (2007): C04S15, doi:10.1029/2006JC003728.
    Description: The summer circulations and hydrographic fields of the Kara Sea are reconstructed for mean, positive and negative Arctic Oscillation regimes employing a variational data assimilation technique which provides the best fit of reconstructed fields to climatological data and satisfies dynamical and kinematic constraints of a quasi-stationary primitive equation ocean circulation model. The reconstructed circulations agree well with the measurements and are characterized by inflow of 0.63, 0.8, 0.51 Sv through Kara Gate and 1.18, 1.1, 1.12 Sv between Novaya Zemlya and Franz Josef Land, for mean climatologic conditions, positive and negative AO indexes, respectively. The major regions of water outflow for these regimes are the St. Anna Trough (1.17, 1.21, 1.34 Sv) and Vilkitsky/Shokalsky Straits (0.52, 0.7, 0.51 Sv). The optimized velocity pattern for the mean climatological summer reveals a strong anticyclonic circulation in the central part of the Kara Sea (Region of Fresh Water Inflow, ROFI zone) and is confirmed by ADCP surveys and laboratory modeling. This circulation is well pronounced for both high and low AO phases, but in the positive AO phase it is shifted approximately 200 km west relatively to its climatological center. During the negative AO phase the ROFI locaion is close to its climatological position. The results of the variational data assimilation approach were compared with the simulated data from the Hamburg Shelf Ocean Model (HAMSOM) and Naval Postgraduate School 18 km resolution (NPS-18) model to validate these models.
    Description: This research is supported by the Frontier Research System for Global Change, through JAMSTEC, Japan, and by the National Science Foundation Office of Polar Programs (under cooperative agreements OPP-0002239 and OPP-0327664 with the International Arctic Research Center, University of Alaska Fairbanks). The development of the data assimilation system, utilized in this study, was also supported by NSF grant OCE-0118200.
    Keywords: Kara Sea ; Variational approach ; Numerical modeling
    Repository Name: Woods Hole Open Access Server
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  • 17
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    Reply to comment by M. Ortega-Sánchez et al. on “High-angle wave instability and emergent shoreline shapes : 1. Modeling of sand waves, flying spits, and capes” (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2008. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 113 (2008): F01006, doi:10.1029/2007JF000885.
    Keywords: Coastline evolution ; Morphodynamic instabilities ; Numerical modeling
    Repository Name: Woods Hole Open Access Server
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  • 18
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    High-angle wave instability and emergent shoreline shapes : 1. Modeling of sand waves, flying spits, and capes (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2006. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 111 (2006): F04011, doi:10.1029/2005JF000422.
    Description: Contrary to traditional findings, the deepwater angle of wave approach strongly affects plan view coastal evolution, giving rise to an antidiffusional “high wave angle” instability for sufficiently oblique deepwater waves (with angles between wave crests and the shoreline trend larger than the value that maximizes alongshore sediment transport, ∼45°). A one-contour-line numerical model shows that a predominance of high-angle waves can cause a shoreline to self-organize into regular, quasiperiodic shapes similar to those found along many natural coasts at scales ranging from kilometers to hundreds of kilometers. The numerical model has been updated from a previous version to include a formulation for the widening of an overly thin barrier by the process of barrier overwash, which is assumed to maintain a minimum barrier width. Systematic analysis shows that the wave climate determines the form of coastal response. For nearly symmetric wave climates (small net alongshore sediment transport), cuspate coasts develop that exhibit increasing relative cross-shore amplitude and pointier tips as the proportion of high-angle waves is increased. For asymmetrical wave climates, shoreline features migrate in the downdrift direction, either as subtle alongshore sand waves or as offshore-extending “flying spits,” depending on the proportion of high-angle waves. Numerical analyses further show that the rate that the alongshore scale of model features increases through merging follows a diffusional temporal scale over several orders of magnitude, a rate that is insensitive to the proportion of high-angle waves. The proportion of high-angle waves determines the offshore versus alongshore aspect ratio of self-organized shoreline undulations.
    Description: This research was funded by the Andrew W. Mellon Foundation and NSF grants DEB-05-07987 and EAR-04-44792.
    Keywords: Coastline evolution ; Morphodynamic instabilities ; Numerical modeling
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  • 19
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    Historic 2005 toxic bloom of Alexandrium fundyense in the western Gulf of Maine : 2. Coupled biophysical numerical modeling (2010)
    American Geophysical Union
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    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2008. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 113 (2008): C07040, doi:10.1029/2007JC004602.
    Description: A coupled physical/biological modeling system was used to hindcast a massive Alexandrium fundyense bloom that occurred in the western Gulf of Maine in 2005 and to investigate the relative importance of factors governing the bloom's initiation and development. The coupled system consists of a state-of-the-art, free-surface primitive equation Regional Ocean Modeling System (ROMS) tailored for the Gulf of Maine (GOM) using a multinested configuration, and a population dynamics model for A. fundyense. The system was forced by realistic momentum and buoyancy fluxes, tides, river runoff, observed A. fundyense benthic cyst abundance, and climatological nutrient fields. Extensive comparisons were made between simulated (both physical and biological) fields and in situ observations, revealing that the hindcast model is capable of reproducing the temporal evolution and spatial distribution of the 2005 bloom. Sensitivity experiments were then performed to distinguish the roles of three major factors hypothesized to contribute to the bloom: (1) the high abundance of cysts in western GOM sediments; (2) strong ‘northeaster' storms with prevailing downwelling-favorable winds; and (3) a large amount of fresh water input due to abundant rainfall and heavy snowmelt. Model results suggest the following. (1) The high abundance of cysts in western GOM was the primary factor of the 2005 bloom. (2) Wind-forcing was an important regulator, as episodic bursts of northeast winds caused onshore advection of offshore populations. These downwelling favorable winds accelerated the alongshore flow, resulting in transport of high cell concentrations into Massachusetts Bay. A large regional bloom would still have happened, however, even with normal or typical winds for that period. (3) Anomalously high river runoff in 2005 resulted in stronger buoyant plumes/currents, which facilitated the transport of cell population to the western GOM. While affecting nearshore cell abundance in Massachusetts Bay, the buoyant plumes were confined near to the coast, and had limited impact on the gulf-wide bloom distribution.
    Description: Research support was provided through the Woods Hole Center for Oceans and Human Health, National Science Foundation (NSF) grant OCE-0430723 and National Institute of Environmental Health Science (NIEHS) grant 1-P50-ES012742-01, ECOHAB program through NSF grant OCE-9808173 and NOAA grant NA96OP0099, and GOMTOX program through NOAA grant NA06NOS4780245.
    Keywords: Gulf of Maine ; Harmful algal bloom ; Numerical modeling
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  • 20
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    Barotropic tides on the southeast New England shelf : a view from a hybrid data assimilative modeling approach (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2006. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 111 (2006): C08002, doi:10.1029/2005JC003254.
    Description: A high-resolution hybrid data assimilative (DA) modeling system is used to study barotropic tides and tidal dynamics on the southeast New England shelf. In situ observations include tidal harmonics of 5 major tidal constituents [M2, S2, N2, O1, and K1] analyzed from coastal sea level and bottom pressure gauges. The DA system consists of both forward and inverse models. The former is the three-dimensional, finite difference, nonlinear Regional Ocean Modeling System (ROMS). The latter is a three-dimensional linearized, frequency domain, finite element model TRUXTON. The DA system assimilates in situ observations via the inversion for the barotropic tidal open boundary conditions (OBCs). Model skill is evaluated by comparing the misfits between the observed and modeled tidal harmonics. The assimilation scheme is found effective and efficient in correcting the tidal OBCs, which in turn improve ROMS tidal solutions. Up to 50% decreases of model/data misfits are achieved after inverse data assimilation. Co-amplitude and co-phase maps and tidal current ellipses for each of 5 tidal constituents are generated, revealing complex tidal variability in this transition region between the tidally amplified Gulf of Maine in the northeast and the tidally much less energetic Middle Atlantic Bight in the southwest. Detailed examinations on the residual circulation, energetics, and momentum balances of the M2 tide reveal the key roles of the unique bottom bathymetry of Nantucket Shoals and the complex coastal geometry in affecting the regional tidal dynamics.
    Description: This work was supported by WHOI Coastal Ocean Institute Research Award. J.W. acknowledges support of the Office of Naval Research.
    Keywords: Continental shelf ; Barotropic tides ; Numerical modeling ; Data assimilation
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