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  • 1
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    Vorticity generation by short-crested wave breaking (2013)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 39 (2012): L24604, doi:10.1029/2012GL054034.
    Description: Eddies and vortices associated with breaking waves rapidly disperse pollution, nutrients, and terrestrial material along the coast. Although theory and numerical models suggest that vorticity is generated near the ends of a breaking wave crest, this hypothesis has not been tested in the field. Here we report the first observations of wave-generated vertical vorticity (e.g., horizontal eddies), and find that individual short-crested breaking waves generate significant vorticity [O(0.01 s−1)] in the surfzone. Left- and right-handed wave ends generate vorticity of opposite sign, consistent with theory. In contrast to theory, the observed vorticity also increases inside the breaking crest, possibly owing to onshore advection of vorticity generated at previous stages of breaking or from the shape of the breaking region. Short-crested breaking transferred energy from incident waves to lower frequency rotational motions that are a primary mechanism for dispersion near the shoreline.
    Description: Funding was provided by a National Security Science and Engineering Faculty Fellowship, the Office of Naval Research, and a Woods Hole Oceanographic Institution Postdoctoral Fellowship.
    Description: 2013-06-21
    Keywords: Mixing ; Nearshore ; Turbulence ; Vorticity ; Waves
    Repository Name: Woods Hole Open Access Server
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  • 2
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    A model of the Arctic Ocean carbon cycle (2012)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C12020, doi:10.1029/2011JC006998.
    Description: A three dimensional model of Arctic Ocean circulation and mixing, with a horizontal resolution of 18 km, is overlain by a biogeochemical model resolving the physical, chemical and biological transport and transformations of phosphorus, alkalinity, oxygen and carbon, including the air-sea exchange of dissolved gases and the riverine delivery of dissolved organic carbon. The model qualitatively captures the observed regional and seasonal trends in surface ocean PO4, dissolved inorganic carbon, total alkalinity, and pCO2. Integrated annually, over the basin, the model suggests a net annual uptake of 59 Tg C a−1, within the range of published estimates based on the extrapolation of local observations (20–199 Tg C a−1). This flux is attributable to the cooling (increasing solubility) of waters moving into the basin, mainly from the subpolar North Atlantic. The air-sea flux is regulated seasonally and regionally by sea-ice cover, which modulates both air-sea gas transfer and the photosynthetic production of organic matter, and by the delivery of riverine dissolved organic carbon (RDOC), which drive the regional contrasts in pCO2 between Eurasian and North American coastal waters. Integrated over the basin, the delivery and remineralization of RDOC reduces the net oceanic CO2 uptake by ~10%.
    Description: This study has been carried out as part of ECCO2 and SASS (Synthesis of the Arctic System Science) projects funded by NASA and NSF, respectively. MM and MJF are grateful for support from the National Science Foundation (ARC-0531119 and ARC-0806229) for financial support. MM also acknowledges NASA for providing computer time, the use of the computing facilities at NAS center and also the Scripps post-doctoral program for further financial support that helped to complete the manuscript. RMK also acknowledges NOAA for support (NA08OAR4310820 and NA08OAR4320752).
    Description: 2012-06-15
    Keywords: Air-sea gas exchange ; Biogeochemical cycles ; Land-ocean coupling ; Numerical modeling ; Ocean carbon cycle ; Polar oceans
    Repository Name: Woods Hole Open Access Server
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  • 3
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    The spatial distribution and annual cycle of upper ocean thermohaline structure (2012)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 117 (2012): C02027, doi:10.1029/2011JC007033.
    Description: Observations of the spatial distribution and persistence of thermohaline structure are presented, and show how advection and diffusion affect a passive tracer. More than two years of underwater glider observations in the central subtropical North Pacific showed thermohaline variability over horizontal scales from 5 to 1300 km. Thermohaline fluctuations along isopycnals (spice fluctuations) were elevated in layers throughout the water column with the largest fluctuations near the surface and subtropical frontal regions. Fluctuations were uncorrelated between the layers but stirred by the same velocity field. Spice variance had local extrema in the vertical because of differences in source water properties and the influence of neighboring water masses. Spice variance spanned about three orders of magnitude along deeper isopycnals with larger variance where different water masses met and where velocity and vorticity variance were elevated. Horizontal wave number spectra of spice had slopes of −2 everywhere in the upper 1000 m. Submesoscale spice fluctuations had slopes in physical space near the ratio of the Coriolis parameter to the buoyancy frequency (f/N), consistent with predictions of quasi-geostrophic theory. In the mixed layer, thermohaline structure had a significant annual cycle with smaller interannual differences. Thermohaline fluctuations left behind during restratification and isolated from the mixed layer decayed with time because of diffusion along isopycnals. Horizontal diffusivity estimates in the remnant mixed layer were 0.4 m2 s−1 at 15–28 km wavelengths and 0.9 m2 s−1 at 35–45 km wavelengths.
    Description: We gratefully acknowledge the National Science Foundation for funding this work under grant number OCE0452574.
    Description: 2012-08-18
    Keywords: Diffusion ; Mixing ; Spice ; Stirring ; Thermohaline structure
    Repository Name: Woods Hole Open Access Server
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  • 4
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    Tracer transport timescales and the observed Atlantic-Pacific lag in the timing of the Last Termination (2012)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2012. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Paleoceanography 27 (2012): PA3225, doi:10.1029/2011PA002273.
    Description: The midpoint of the Last Termination occurred 4,000 years earlier in the deep Atlantic than the deep Pacific according to a pair of benthic foraminiferal δ18O records, seemingly implying an internal circulation shift because the lag is much longer than the deep radiocarbon age. Here a scenario where the lag is instead caused by regional surface boundary condition changes, delays due to oceanic transit timescales, and the interplay between temperature and seawater δ18O (δ18Ow) is quantified with a tracer transport model of the modern-day ocean circulation. Using an inverse method with individual Green functions for 2,806 surface sources, a time history of surface temperature and δ18Ow is reconstructed for the last 30,000 years that is consistent with the foraminiferal oxygen-isotope data, Mg/Ca-derived deep temperature, and glacial pore water records. Thus, in the case that the ocean circulation was relatively unchanged between glacial and modern times, the interbasin lag could be explained by the relatively late local glacial maximum around Antarctica where surface δ18Ow continues to rise even after the North Atlantic δ18Ow falls. The arrival of the signal of the Termination is delayed at the Pacific core site due to the destructive interference of the still-rising Antarctic signal and the falling North Atlantic signal. This scenario is only possible because the ocean is not a single conveyor belt where all waters at the Pacific core site previously passed the Atlantic core site, but instead the Pacific core site is bathed more prominently by waters with a direct Antarctic source.
    Description: G.G. is supported by NSF grant OIA-1124880 and the WHOI Arctic Research Initiative.
    Description: 2013-03-06
    Keywords: Deglaciation ; Foraminiferal data ; Inverse methods ; Numerical modeling ; Oxygen-18 ; Tracers
    Repository Name: Woods Hole Open Access Server
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  • 5
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    Wave-angle control of delta evolution (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 38 (2011): L13405, doi:10.1029/2011GL047630.
    Description: Wave-influenced deltas, with large-scale arcuate shapes and demarcated beach ridge complexes, often display an asymmetrical form about their river channel. Here, we use a numerical model to demonstrate that the angles from which waves approach a delta can have a first-order influence upon its plan-view morphologic evolution and sedimentary architecture. The directional spread of incoming waves plays a dominant role over fluvial sediment discharge in controlling the width of an active delta lobe, which in turn affects the characteristic rates of delta progradation. Oblique wave approach (and a consequent net alongshore sediment transport) can lead to the development of morphologic asymmetry about the river in a delta's plan-view form. This plan-form asymmetry can include the development of discrete breaks in shoreline orientation and the appearance of self-organized features arising from shoreline instability along the downdrift delta flank, such as spits and migrating shoreline sand waves—features observed on natural deltas. Somewhat surprisingly, waves approaching preferentially from one direction tend to increase sediment deposition updrift of the river. This ‘morphodynamic groin effect’ occurs when the delta's plan-form aspect ratio is sufficiently large such that the orientation of the shoreline on the downdrift flank is rotated past the angle of maximum alongshore sediment transport, resulting in preferential redirection of fluvial sediment updrift of the river mouth.
    Description: This research was supported by NSF grants EAR‐0952146 and OCE‐0623766, the Exxon‐Mobil Upstream Research Company, and the WHOI‐USGS postdoctoral fellowship.
    Keywords: Depositional asymmetry ; Large-scale coastal evolution ; Numerical modeling ; Plan-view delta evolution
    Repository Name: Woods Hole Open Access Server
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  • 6
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    Modeling surf zone tracer plumes : 2. Transport and dispersion (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C11028, doi:10.1029/2011JC007211.
    Description: Five surf zone dye tracer releases from the HB06 experiment are simulated with a tracer advection diffusion model coupled to a Boussinesq surf zone model (funwaveC). Model tracer is transported and stirred by currents and eddies and diffused with a breaking wave eddy diffusivity, set equal to the breaking wave eddy viscosity, and a small (0.01 m2 s−1) background diffusivity. Observed and modeled alongshore parallel tracer plumes, transported by the wave driven alongshore current, have qualitatively similar cross-shore structures. Although the model skill for mean tracer concentration is variable (from negative to 0.73) depending upon release, cross-shore integrated tracer moments (normalized by the cross-shore tracer integral) have consistently high skills (≈0.9). Modeled and observed bulk surf zone cross-shore diffusivity estimates are also similar, with 0.72 squared correlation and skill of 0.4. Similar to the observations, the model bulk (absolute) cross-shore diffusivity is consistent with a mixing length parameterization based on low-frequency (0.001–0.03 Hz) eddies. The model absolute cross-shore dispersion is dominated by stirring from surf zone eddies and does not depend upon the presence of the breaking wave eddy diffusivity. Given only the bathymetry and incident wave field, the coupled Boussinesq-tracer model qualitatively reproduces the observed cross-shore absolute tracer dispersion, suggesting that the model can be used to study surf zone tracer dispersion mechanisms.
    Description: This research was supported by SCCOOS, CA Coastal Conservancy, NOAA, NSF, ONR, and CA Sea Grant.
    Description: 2012-05-18
    Keywords: Dispersion ; Mixing ; Surf zone ; Tracer
    Repository Name: Woods Hole Open Access Server
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  • 7
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    Modeling surf zone tracer plumes : 1. Waves, mean currents, and low-frequency eddies (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C11027, doi:10.1029/2011JC007210.
    Description: A model that accurately simulates surf zone waves, mean currents, and low-frequency eddies is required to diagnose the mechanisms of surf zone tracer transport and dispersion. In this paper, a wave-resolving time-dependent Boussinesq model is compared with waves and currents observed during five surf zone dye release experiments. In a companion paper, Clark et al. (2011) compare a coupled tracer model to the dye plume observations. The Boussinesq model uses observed bathymetry and incident random, directionally spread waves. For all five releases, the model generally reproduces the observed cross-shore evolution of significant wave height, mean wave angle, bulk directional spread, mean alongshore current, and the frequency-dependent sea surface elevation spectra and directional moments. The largest errors are near the shoreline where the bathymetry is most uncertain. The model also reproduces the observed cross-shore structure of rotational velocities in the infragravity (0.004 〈 f 〈 0.03 Hz) and very low frequency (VLF) (0.001 〈 f 〈 0.004 Hz) bands, although the modeled VLF energy is 2–3 times too large. Similar to the observations, the dominant contributions to the modeled eddy-induced momentum flux are in the VLF band. These eddies are elliptical near the shoreline and circular in the mid surf zone. The model-data agreement for sea swell waves, low-frequency eddies, and mean currents suggests that the model is appropriate for simulating surf zone tracer transport and dispersion.
    Description: This research was supported by SCCOOS, CA Coastal Conservancy, NOAA, NSF, ONR, and CA Sea Grant.
    Description: 2012-05-18
    Keywords: Mixing ; Surf zone ; Tracer dispersion
    Repository Name: Woods Hole Open Access Server
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  • 8
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    Eddy stirring in the Southern Ocean (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C09019, doi:10.1029/2010JC006818.
    Description: There is an ongoing debate concerning the distribution of eddy stirring across the Antarctic Circumpolar Current (ACC) and the nature of its controlling processes. The problem is addressed here by estimating the isentropic eddy diffusivity κ from a collection of hydrographic and altimetric observations, analyzed in a mixing length theoretical framework. It is shown that, typically, κ is suppressed by an order of magnitude in the upper kilometer of the ACC frontal jets relative to their surroundings, primarily as a result of a local reduction of the mixing length. This observation is reproduced by a quasi-geostrophic theory of eddy stirring across a broad barotropic jet based on the scaling law derived by Ferrari and Nikurashin (2010). The theory interprets the observed widespread suppression of the mixing length and κ in the upper layers of frontal jets as the kinematic consequence of eddy propagation relative to the mean flow within jet cores. Deviations from the prevalent regime of mixing suppression in the core of upper-ocean jets are encountered in a few special sites. Such ‘leaky jet’ segments appear to be associated with sharp stationary meanders of the mean flow that are generated by the interaction of the ACC with major topographic features. It is contended that the characteristic thermohaline structure of the Southern Ocean, consisting of multiple upper-ocean thermohaline fronts separated and underlaid by regions of homogenized properties, is largely a result of the widespread suppression of eddy stirring by parallel jets.
    Description: This study was conducted during A.C.N. G.’s stay at MIT, which was supported jointly by MIT and the U.K. Natural Environment Research Council (NERC) through a NERC Advanced Research Fellowship (NE/C517633/1). R.F. acknowledges the support of NSFaward OCE‐0825376. K.P.’s participation in this work was supported by WHOI bridge support funds.
    Keywords: Antarctic Circumpolar Current ; Eddy stirring ; Mixing
    Repository Name: Woods Hole Open Access Server
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  • 9
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    Turbulent mixing in a strongly forced salt wedge estuary (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 115 (2010): C12024, doi:10.1029/2009JC006061.
    Description: Turbulent mixing of salt is examined in a shallow salt wedge estuary with strong fluvial and tidal forcing. A numerical model of the Merrimack River estuary is used to quantify turbulent stress, shear production, and buoyancy flux. Little mixing occurs during flood tides despite strong velocities because bottom boundary layer turbulence is dislocated from stratification elevated in the water column. During ebbs, bottom salinity fronts form at a series of bathymetric transitions. At the fronts, near-bottom velocity and shear stress are low, but shear, stress, and buoyancy flux are elevated at the pycnocline. Internal shear layers provide the dominant source of mixing during the early ebb. Later in the ebb, the pycnocline broadens and moves down such that boundary layer turbulence dominates mixing. Mixing occurs primarily during ebbs, with internal shear mixing accounting for about 50% of the total buoyancy flux. Both the relative contribution of internal shear mixing and the mixing efficiency increase with discharge, with bulk mixing efficiencies between 0.02 and 0.07. Buoyancy fluxes in the estuary increase with discharge up to about 400 m3 s−1 above which a majority of the mixing occurs offshore. Observed buoyancy fluxes were more consistent with the k-ɛ turbulence closure than the Mellor-Yamada closure, and more total mixing occurred in the estuary with k-ɛ. Calculated buoyancy fluxes were sensitive to horizontal grid resolution, as a lower resolution grid yielded less integrated buoyancy flux in the estuary and exported lower salinity water but likely had greater numerical mixing.
    Description: This research was funded by National Science Foundation Grant OCE‐0452054. Ralston also received support from The Penzance Endowed Fund in Support of Assistant Scientists and The John F. and Dorothy H. Magee Fund in Support of Scientific Staff at Woods Hole Oceanographic Institution.
    Keywords: Mixing ; Turbulence ; Salt wedge estuary
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  • 10
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    Complex mean circulation over the inner shelf south of Martha's Vineyard revealed by observations and a high-resolution model (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2011. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 116 (2011): C10036, doi:10.1029/2011JC007035.
    Description: Inner-shelf circulation is governed by the interaction between tides, baroclinic forcing, winds, waves, and frictional losses; the mean circulation ultimately governs exchange between the coast and ocean. In some cases, oscillatory tidal currents interact with bathymetric features to generate a tidally rectified flow. Recent observational and modeling efforts in an overlapping domain centered on the Martha's Vineyard Coastal Observatory (MVCO) provided an opportunity to investigate the spatial and temporal complexity of circulation on the inner shelf. ADCP and surface radar observations revealed a mean circulation pattern that was highly variable in the alongshore and cross-shore directions. Nested modeling incrementally improved representation of the mean circulation as grid resolution increased and indicated tidal rectification as the generation mechanism of a counter-clockwise gyre near the MVCO. The loss of model skill with decreasing resolution is attributed to insufficient representation of the bathymetric gradients (Δh/h), which is important for representing nonlinear interactions between currents and bathymetry. The modeled momentum balance was characterized by large spatial variability of the pressure gradient and horizontal advection terms over short distances, suggesting that observed inner-shelf momentum balances may be confounded. Given the available observational and modeling data, this work defines the spatially variable mean circulation and its formation mechanism—tidal rectification—and illustrates the importance of model resolution for resolving circulation and constituent exchange near the coast. The results of this study have implications for future observational and modeling studies near the MVCO and other inner-shelf locations with alongshore bathymetric variability.
    Description: Funding was provided through the Office of Naval Research Ripples DRI, U.S. Geological Survey Coastal and Marine Geology Program, and National Science Foundation.
    Keywords: Coastal and nearshore circulation ; Grid resolution ; Nesting ; Numerical modeling ; Tidal rectification
    Repository Name: Woods Hole Open Access Server
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  • 11
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    A box model test of the freshwater forcing hypothesis of abrupt climate change and the physics governing ocean stability (2011)
    American Geophysical Union
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Paleoceanography 25 (2010): PA4222, doi:10.1029/2010PA001936.
    Description: Observations and an ocean box model are combined in order to test the adequacy of the freshwater forcing hypothesis to explain abrupt climate change given the uncertainties in the parameterization of vertical buoyancy transport in the ocean. The combination is carried out using Bayesian stochastic inversion, which allows us to infer changes in the mass balance of Northern Hemisphere (NH) ice sheets and in the meridional transports of mass and heat in the Atlantic Ocean that would be required to explain Dansgaard-Oeschger Interstadials (DOIs) from 30 to 39 kyr B.P. The mean sea level changes implied by changes in NH ice sheet mass balance agree in amplitude and timing with reconstructions from the geologic record, which gives some support to the freshwater forcing hypothesis. The inversion suggests that the duration of the DOIs should be directly related to the growth of land ice. Our results are unaffected by uncertainties in the representation of vertical buoyancy transport in the ocean. However, the solutions are sensitive to assumptions about physical processes at polar latitudes.
    Description: This material is based upon work supported by the National Science Foundation under grant OCE‐0402363 and Department of Energy grant DE‐FG02‐08ER64619.
    Keywords: Inversion ; MOC ; Abrupt ; Sea level ; Coral ; Mixing
    Repository Name: Woods Hole Open Access Server
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  • 12
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    Storm-driven mixing and potential impact on the Arctic Ocean (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2004. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 109 (2004): C04008, doi:10.1029/2001JC001248.
    Description: Observations of the ocean, atmosphere, and ice made by Ice-Ocean Environmental Buoys indicate that mixing events reaching the depth of the halocline have occurred in various regions in the Arctic Ocean. Our analysis suggests that these mixing events were mechanically forced by intense storms moving across the buoy sites. In this study, we analyzed these mixing events in the context of storm developments that occurred in the Beaufort Sea and in the general area just north of Fram Strait, two areas with quite different hydrographic structures. The Beaufort Sea is strongly influenced by inflow of Pacific water through Bering Strait, while the area north of Fram Strait is directly affected by the inflow of warm and salty North Atlantic water. Our analyses of the basin-wide evolution of the surface pressure and geostrophic wind fields indicate that the characteristics of the storms could be very different. The buoy-observed mixing occurred only in the spring and winter seasons when the stratification was relatively weak. This indicates the importance of stratification, although the mixing itself was mechanically driven. We also analyze the distribution of storms, both the long-term climatology and the patterns for each year in the past 2 decades. The frequency of storms is also shown to be correlated (but not strongly) to Arctic Oscillation indices. This study indicates that the formation of new ice that leads to brine rejection is unlikely the mechanism that results in the type of mixing that could overturn the halocline. On the other hand, synoptic-scale storms can force mixing deep enough to the halocline and thermocline layer. Despite a very stable stratification associated with the Arctic halocline, the warm subsurface thermocline water is not always insulated from the mixed layer.
    Description: This study has been supported by the NASA Cryospheric Science Program and the International Arctic Reseach Center. We benefited from discussion with Dr. A. Proshutinsky. D. Walsh wishes to thank the Frontier Research System for Global Change for their support. The IOEB program was supported by ONR High-Latitude Dynamics Program and Japan Marine Science and Technology Center (JAMSTEC).
    Keywords: Arctic Ocean ; Mixing ; Storm ; Upper ocean
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  • 13
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    Mixing at the head of a canyon : a laboratory investigation of fluid exchanges in a rotating, stratified basin (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2006. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 111 (2006): C12004, doi:10.1029/2006JC003667.
    Description: Observations indicate that oceanic mixing is intensified near the head of submarine canyons. How the presence of canyon walls affects the local production and distribution of mixed fluid is an open question. These dynamics are addressed through rotating tank experiments which impose mixing at middepth at the closed end of a channel open to a larger body of water. Turbulence is generated in a linearly stratified fluid with initial buoyancy frequency N by means of a single bar oscillated with frequency ω. The mixed fluid quickly reaches a steady state height h ∼ (ω/N)1/2 independent of the Coriolis frequency f and collapses into the channel interior. A small percentage of the fluid exported from the turbulent zone enters a boundary current. The bulk forms a cyclonic circulation in front of the bar. As the recirculation cell expands to fill the channel, it restricts horizontal entrainment into the turbulent zone. Mixed fluid flux decays with time as t inline equation and is dependent on the size of the mixing zone and the balance between turbulence, rotation, and stratification. The recirculation cell is confined within the channel, and export of mixed fluid into the basin is restricted to the weak boundary current. As horizontal entrainment is shut down, long-term production of mixed fluid relies more on vertical entrainment. However, the scalings indicate that short-term dynamics are the most applicable to oceanic conditions.
    Description: This work was supported by the Ocean Ventures Fund, the Westcott Fund, and the WHOI Academic Programs Office. Financial support was also provided by the National Science Foundation through grant OCE-9616949.
    Keywords: Mixing ; Canyon ; Laboratory
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  • 14
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    Magmatic and tectonic extension at mid-ocean ridges : 1. Controls on fault characteristics (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2008. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geochemistry Geophysics Geosystems 9 (2008): Q08O10, doi:10.1029/2008GC001965.
    Description: We use 2-D numerical models to explore the thermal and mechanical effects of magma intrusion on fault initiation and growth at slow and intermediate spreading ridges. Magma intrusion is simulated by widening a vertical column of model elements located within the lithosphere at a rate equal to a fraction, M, of the total spreading rate (i.e., M = 1 for fully magmatic spreading). Heat is added in proportion to the rate of intrusion to simulate the thermal effects of magma crystallization and the injection of hot magma into the crust. We examine a range of intrusion rates and axial thermal structures by varying M, spreading rate, and the efficiency of crustal cooling by conduction and hydrothermal circulation. Fault development proceeds in a sequential manner, with deformation focused on a single active normal fault whose location alternates between the two sides of the ridge axis. Fault spacing and heave are primarily sensitive to M and secondarily sensitive to axial lithosphere thickness and the rate that the lithosphere thickens with distance from the axis. Contrary to what is often cited in the literature, but consistent with prior results of mechanical modeling, we find that thicker axial lithosphere tends to reduce fault spacing and heave. In addition, fault spacing and heave are predicted to increase with decreasing rates of off-axis lithospheric thickening. The combination of low M, particularly when M approaches 0.5, as well as a reduced rate of off-axis lithospheric thickening produces long-lived, large-offset faults, similar to oceanic core complexes. Such long-lived faults produce a highly asymmetric axial thermal structure, with thinner lithosphere on the side with the active fault. This across-axis variation in thermal structure may tend to stabilize the active fault for longer periods of time and could concentrate hydrothermal circulation in the footwall of oceanic core complexes.
    Description: Funding for this research was provided by NSF grants OCE-0327018 (M.D.B.), OCE-0548672 (M.D.B.), OCE- 0327051 (G.I.), and OCE-03-51234 (G.I.).
    Keywords: Mid-ocean ridges ; Faulting ; Magmatism ; Numerical modeling
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  • 15
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    Impact of circulation on export production, dissolved organic matter, and dissolved oxygen in the ocean : results from Phase II of the Ocean Carbon-cycle Model Intercomparison Project (OCMIP-2) (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 21 (2007): GB3007, doi:10.1029/2006GB002857.
    Description: Results are presented of export production, dissolved organic matter (DOM) and dissolved oxygen simulated by 12 global ocean models participating in the second phase of the Ocean Carbon-cycle Model Intercomparison Project. A common, simple biogeochemical model is utilized in different coarse-resolution ocean circulation models. The model mean (±1σ) downward flux of organic matter across 75 m depth is 17 ± 6 Pg C yr−1. Model means of globally averaged particle export, the fraction of total export in dissolved form, surface semilabile dissolved organic carbon (DOC), and seasonal net outgassing (SNO) of oxygen are in good agreement with observation-based estimates, but particle export and surface DOC are too high in the tropics. There is a high sensitivity of the results to circulation, as evidenced by (1) the correlation of surface DOC and export with circulation metrics, including chlorofluorocarbon inventory and deep-ocean radiocarbon, (2) very large intermodel differences in Southern Ocean export, and (3) greater export production, fraction of export as DOM, and SNO in models with explicit mixed layer physics. However, deep-ocean oxygen, which varies widely among the models, is poorly correlated with other model indices. Cross-model means of several biogeochemical metrics show better agreement with observation-based estimates when restricted to those models that best simulate deep-ocean radiocarbon. Overall, the results emphasize the importance of physical processes in marine biogeochemical modeling and suggest that the development of circulation models can be accelerated by evaluating them with marine biogeochemical metrics.
    Description: R. G. N. and J. L. S. acknowledge the support of NASA grants NAG5-6451 and NAG5-6591, respectively, as part of the JGOFS Synthesis and Modeling Program. G. K. P. and F. J. acknowledge support by the Swiss National Science Foundation. European contributions were supported by the EU GOSAC Project (ENV4-CT97- 0495).
    Keywords: Export production ; Numerical modeling ; Ocean circulation
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  • 16
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    Sorted bed forms as self-organized patterns : 2. Complex forcing scenarios (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 112 (2007): F03016, doi:10.1029/2006JF000666.
    Description: We employ a numerical model to study the development of sorted bed forms under a variety of hydrodynamic and sedimentary conditions. Results indicate that increased variability in wave height decreases the growth rate of the features and can potentially give rise to complicated, a priori unpredictable, behavior. This happens because the system responds to a change in wave characteristics by attempting to self-organize into a patterned seabed of different geometry and spacing. The new wavelength might not have enough time to emerge before a new change in wave characteristics occurs, leading to less regular seabed configurations. The new seabed configuration is also highly dependent on the preexisting morphology, which further limits the possibility of predicting future behavior. For the same reasons, variability in the mean current magnitude and direction slows down the growth of features and causes patterns to develop that differ from classical sorted bed forms. Spatial variability in grain size distribution and different types of net sediment aggradation/degradation can also result in the development of sorted bed forms characterized by a less regular shape. Numerical simulations qualitatively agree with observed geometry (spacing and height) of sorted bed forms. Also in agreement with observations is that at shallower depths, sorted bed forms are more likely to be affected by changes in the forcing conditions, which might also explain why, in shallow waters, sorted bed forms are described as ephemeral features. Finally, simulations indicate that the different sorted bed form shapes and patterns observed in the field might not necessarily be related to diverse physical mechanisms. Instead, variations in sorted bed form characteristics may result from variations in local hydrodynamic and/or sedimentary conditions.
    Description: G.C., M.O.G., and T.M.H. acknowledge funding from the (New Zealand) Foundation for Research, Science and Technology (contract C01X0401). The National Science Foundation (OCE0452178) supported A.B.M.
    Keywords: Self-organization ; Sorted bed forms ; Numerical modeling
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  • 17
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    Investigation of the summer Kara Sea circulation employing a variational data assimilation technique (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 112 (2007): C04S15, doi:10.1029/2006JC003728.
    Description: The summer circulations and hydrographic fields of the Kara Sea are reconstructed for mean, positive and negative Arctic Oscillation regimes employing a variational data assimilation technique which provides the best fit of reconstructed fields to climatological data and satisfies dynamical and kinematic constraints of a quasi-stationary primitive equation ocean circulation model. The reconstructed circulations agree well with the measurements and are characterized by inflow of 0.63, 0.8, 0.51 Sv through Kara Gate and 1.18, 1.1, 1.12 Sv between Novaya Zemlya and Franz Josef Land, for mean climatologic conditions, positive and negative AO indexes, respectively. The major regions of water outflow for these regimes are the St. Anna Trough (1.17, 1.21, 1.34 Sv) and Vilkitsky/Shokalsky Straits (0.52, 0.7, 0.51 Sv). The optimized velocity pattern for the mean climatological summer reveals a strong anticyclonic circulation in the central part of the Kara Sea (Region of Fresh Water Inflow, ROFI zone) and is confirmed by ADCP surveys and laboratory modeling. This circulation is well pronounced for both high and low AO phases, but in the positive AO phase it is shifted approximately 200 km west relatively to its climatological center. During the negative AO phase the ROFI locaion is close to its climatological position. The results of the variational data assimilation approach were compared with the simulated data from the Hamburg Shelf Ocean Model (HAMSOM) and Naval Postgraduate School 18 km resolution (NPS-18) model to validate these models.
    Description: This research is supported by the Frontier Research System for Global Change, through JAMSTEC, Japan, and by the National Science Foundation Office of Polar Programs (under cooperative agreements OPP-0002239 and OPP-0327664 with the International Arctic Research Center, University of Alaska Fairbanks). The development of the data assimilation system, utilized in this study, was also supported by NSF grant OCE-0118200.
    Keywords: Kara Sea ; Variational approach ; Numerical modeling
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  • 18
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    Influence of mixing on CFC uptake and CFC ages in the North Pacific thermocline (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2004. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 109 (2004): C07014, doi:10.1029/2003JC001988.
    Description: A diagnostic, isopycnal advection-diffusion model based on a climatological, geostrophic flow field is used to study the uptake of chlorofluorocarbons (CFCs) into the portion of the thermocline that outcrops in the open North Pacific (σ θ ≤ 26.6 kg m−3). In addition to advection, isopycnal diffusion is required to match the CFC data collected during the World Ocean Circulation Experiment (WOCE) in the early 1990s. Using reduced outcrop saturations of 80–95% for isopycnals outcropping in the northwestern North Pacific (σ θ ≥ 25.4 kg m−3), together with an isopcynal interior diffusivity of 2000 m2 s−1 and enhanced diffusion (5000 m2 s−1) in the Kuroshio Extension region, further improves the model-data agreement. Along-isopycnal diffusion is particularly important for isopycnals with shadow zones/pool regions in the western subtropical North Pacific that are isolated from direct advective ventilation. The isopycnal mixing causes an estimated increase in CFC-12 inventories on these isopycnals, compared to advection only, ranging from 10–20% (σ θ = 25.6 kg m−3) to 50–130% (σ θ = 26.6 kg m−3) over the subtropics in 1993. This contribution has important consequences for subduction rate estimates derived from CFC inventories and for the location of the subsurface CFC maxima. When tracer ages are derived from the modeled CFC distributions, time-evolving mixing biases become apparent that reflect the nonlinearities in the atmospheric CFC time histories. Comparison with model-calculated ideal ages suggests that during the time of WOCE (∼1993), ventilation ages based on CFC-12 were biased young by as much as 16–24 years for pCFC-12 ages of 25 years, underestimating ideal ages by as much as 40–50%.
    Description: Most of this work was performed while S.M. was a graduate student at the University of Washington under the support of NSF grant OCE-9819192. A postdoctoral scholarship for S.M. at the Woods Hole Oceanographic Institution, with funding provided by the Doherty Foundation, helped complete this work. R.E.S. acknowledges support from NSF grant OCE-0136897.
    Keywords: Tracers ; Mixing ; Thermocline
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  • 19
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    Tidal and spring-neap variations in horizontal dispersion in a partially mixed estuary (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2008. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 113 (2008): C07023, doi:10.1029/2007JC004644.
    Description: A sequence of dye releases in the Hudson River estuary provide a quantitative assessment of horizontal dispersion in a partially mixed estuary. Dye was released in the bottom boundary layer on 4 separate occasions, with varying tidal phase and spring-neap conditions. The three-dimensional distribution of dye was monitored by two vessels with in situ, profiling fluorometers. The three-dimensional spreading of the dye was estimated by calculating the time derivative of the second moment of the dye in the along-estuary, cross-estuary and vertical directions. The average along-estuary dispersion rate was about 100 m2/s, but maximum rates up to 700 m2/s occurred during ebb tides, and minimum rates occurred during flood. Vertical shear dispersion was the principal mechanism during neap tides, but transverse shear dispersion became more important during springs. Suppression of mixing across the pycnocline limited the vertical extent of the patch in all but the maximum spring-tide conditions, with vertical diffusivities in the pycnocline estimated at 4 × 10−5 m2/s during neaps. The limited vertical extent of the dye patch limited the dispersion of the dye relative to the overall estuarine dispersion rate, which was an order of magnitude greater than that of the dye. This study indicates that the effective dispersion of waterborne material in an estuary depends sensitively on its vertical distribution as well as the phase of the spring-neap cycle.
    Description: This research was supported by National Science Foundation Grant OCE04-52054 (W. Geyer), OCE00-99310 (R. Houghton), and OCE00-95913 (R. Chant).
    Keywords: Dispersion ; Mixing ; Spring-neap variations
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  • 20
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    Reply to comment by M. Ortega-Sánchez et al. on “High-angle wave instability and emergent shoreline shapes : 1. Modeling of sand waves, flying spits, and capes” (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2008. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 113 (2008): F01006, doi:10.1029/2007JF000885.
    Keywords: Coastline evolution ; Morphodynamic instabilities ; Numerical modeling
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  • 21
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    High-angle wave instability and emergent shoreline shapes : 1. Modeling of sand waves, flying spits, and capes (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2006. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 111 (2006): F04011, doi:10.1029/2005JF000422.
    Description: Contrary to traditional findings, the deepwater angle of wave approach strongly affects plan view coastal evolution, giving rise to an antidiffusional “high wave angle” instability for sufficiently oblique deepwater waves (with angles between wave crests and the shoreline trend larger than the value that maximizes alongshore sediment transport, ∼45°). A one-contour-line numerical model shows that a predominance of high-angle waves can cause a shoreline to self-organize into regular, quasiperiodic shapes similar to those found along many natural coasts at scales ranging from kilometers to hundreds of kilometers. The numerical model has been updated from a previous version to include a formulation for the widening of an overly thin barrier by the process of barrier overwash, which is assumed to maintain a minimum barrier width. Systematic analysis shows that the wave climate determines the form of coastal response. For nearly symmetric wave climates (small net alongshore sediment transport), cuspate coasts develop that exhibit increasing relative cross-shore amplitude and pointier tips as the proportion of high-angle waves is increased. For asymmetrical wave climates, shoreline features migrate in the downdrift direction, either as subtle alongshore sand waves or as offshore-extending “flying spits,” depending on the proportion of high-angle waves. Numerical analyses further show that the rate that the alongshore scale of model features increases through merging follows a diffusional temporal scale over several orders of magnitude, a rate that is insensitive to the proportion of high-angle waves. The proportion of high-angle waves determines the offshore versus alongshore aspect ratio of self-organized shoreline undulations.
    Description: This research was funded by the Andrew W. Mellon Foundation and NSF grants DEB-05-07987 and EAR-04-44792.
    Keywords: Coastline evolution ; Morphodynamic instabilities ; Numerical modeling
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  • 22
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    Historic 2005 toxic bloom of Alexandrium fundyense in the western Gulf of Maine : 2. Coupled biophysical numerical modeling (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2008. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 113 (2008): C07040, doi:10.1029/2007JC004602.
    Description: A coupled physical/biological modeling system was used to hindcast a massive Alexandrium fundyense bloom that occurred in the western Gulf of Maine in 2005 and to investigate the relative importance of factors governing the bloom's initiation and development. The coupled system consists of a state-of-the-art, free-surface primitive equation Regional Ocean Modeling System (ROMS) tailored for the Gulf of Maine (GOM) using a multinested configuration, and a population dynamics model for A. fundyense. The system was forced by realistic momentum and buoyancy fluxes, tides, river runoff, observed A. fundyense benthic cyst abundance, and climatological nutrient fields. Extensive comparisons were made between simulated (both physical and biological) fields and in situ observations, revealing that the hindcast model is capable of reproducing the temporal evolution and spatial distribution of the 2005 bloom. Sensitivity experiments were then performed to distinguish the roles of three major factors hypothesized to contribute to the bloom: (1) the high abundance of cysts in western GOM sediments; (2) strong ‘northeaster' storms with prevailing downwelling-favorable winds; and (3) a large amount of fresh water input due to abundant rainfall and heavy snowmelt. Model results suggest the following. (1) The high abundance of cysts in western GOM was the primary factor of the 2005 bloom. (2) Wind-forcing was an important regulator, as episodic bursts of northeast winds caused onshore advection of offshore populations. These downwelling favorable winds accelerated the alongshore flow, resulting in transport of high cell concentrations into Massachusetts Bay. A large regional bloom would still have happened, however, even with normal or typical winds for that period. (3) Anomalously high river runoff in 2005 resulted in stronger buoyant plumes/currents, which facilitated the transport of cell population to the western GOM. While affecting nearshore cell abundance in Massachusetts Bay, the buoyant plumes were confined near to the coast, and had limited impact on the gulf-wide bloom distribution.
    Description: Research support was provided through the Woods Hole Center for Oceans and Human Health, National Science Foundation (NSF) grant OCE-0430723 and National Institute of Environmental Health Science (NIEHS) grant 1-P50-ES012742-01, ECOHAB program through NSF grant OCE-9808173 and NOAA grant NA96OP0099, and GOMTOX program through NOAA grant NA06NOS4780245.
    Keywords: Gulf of Maine ; Harmful algal bloom ; Numerical modeling
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  • 23
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    Mixing by shear instability at high Reynolds number (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2010. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 37 (2010): L22607, doi:10.1029/2010GL045272.
    Description: Shear instability is the dominant mechanism for converting fluid motion to mixing in the stratified ocean and atmosphere. The transition to turbulence has been well characterized in laboratory settings and numerical simulations at moderate Reynolds number—it involves “rolling up”, i.e., overturning of the density structure within the cores of the instabilities. In contrast, measurements in an energetic estuarine shear zone reveal that the mixing induced by shear instability at high Reynolds number does not primarily occur by overturning in the cores; rather it results from secondary shear instabilities within the zones of intensified shear separating the cores. This regime is not likely to be observed in the relatively low Reynolds number flows of the laboratory or in direct numerical simulations, but it is likely a common occurrence in the ocean and atmosphere.
    Description: This research was supported by NSF grant OCE‐0824871 and ONR grant N00014‐0810495.
    Keywords: Stratification ; Turbulence ; Mixing
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  • 24
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    Barotropic tides on the southeast New England shelf : a view from a hybrid data assimilative modeling approach (2010)
    American Geophysical Union
    Details
    Publication Date: 2022-05-26
    Description: Author Posting. © American Geophysical Union, 2006. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research 111 (2006): C08002, doi:10.1029/2005JC003254.
    Description: A high-resolution hybrid data assimilative (DA) modeling system is used to study barotropic tides and tidal dynamics on the southeast New England shelf. In situ observations include tidal harmonics of 5 major tidal constituents [M2, S2, N2, O1, and K1] analyzed from coastal sea level and bottom pressure gauges. The DA system consists of both forward and inverse models. The former is the three-dimensional, finite difference, nonlinear Regional Ocean Modeling System (ROMS). The latter is a three-dimensional linearized, frequency domain, finite element model TRUXTON. The DA system assimilates in situ observations via the inversion for the barotropic tidal open boundary conditions (OBCs). Model skill is evaluated by comparing the misfits between the observed and modeled tidal harmonics. The assimilation scheme is found effective and efficient in correcting the tidal OBCs, which in turn improve ROMS tidal solutions. Up to 50% decreases of model/data misfits are achieved after inverse data assimilation. Co-amplitude and co-phase maps and tidal current ellipses for each of 5 tidal constituents are generated, revealing complex tidal variability in this transition region between the tidally amplified Gulf of Maine in the northeast and the tidally much less energetic Middle Atlantic Bight in the southwest. Detailed examinations on the residual circulation, energetics, and momentum balances of the M2 tide reveal the key roles of the unique bottom bathymetry of Nantucket Shoals and the complex coastal geometry in affecting the regional tidal dynamics.
    Description: This work was supported by WHOI Coastal Ocean Institute Research Award. J.W. acknowledges support of the Office of Naval Research.
    Keywords: Continental shelf ; Barotropic tides ; Numerical modeling ; Data assimilation
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