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  • 1
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    Oxford University Press
    Publikationsdatum: 2017-04-04
    Beschreibung: We provide an updated present-day stress map for the Italian territory. Following the World Stress Map (WSM) Project guidelines, we list the different stress indicators, explaining the criteria used to select data. We discuss the data, which will also be included in the 2016 release of the WSM, highlighting the areas for which we have added stress information. Our map displays the minimum horizontal stress orientations inferred from crustal stress indicators down to 40 km depth using data of A–C quality, updated for earthquakes until December 2015. We have completely reviewed all data, and the data set now contains 855 entries, in contrast to the previous 715. The number of data with A–C quality of 630 corresponds to an increase of 26 per cent relative to the previous data set. In particular, the new data set contains the results of the analysis of borehole breakouts, critically reviewed data from earthquake focal mechanisms, data concerning active faults, formal inversions of focal mechanisms of seismic sequences or of restricted areas and one stress determination from overcoring. The new data set defines the stress field in areas not well covered by the previous data: the region north to the Po Plain and the central Adriatic sea, both characterized by a thrust- and strike-faulting regime, the northern Sicilian belt with a prevailing normal-faulting regime, and the Ionian sea with a strike-slip regime.
    Beschreibung: Published
    Beschreibung: 1525-1531
    Beschreibung: 2T. Tettonica attiva
    Beschreibung: JCR Journal
    Beschreibung: restricted
    Schlagwort(e): Seismicity and tectonics ; Dynamics: seismotectonics ; Crustal structure ; Europe ; 04. Solid Earth::04.07. Tectonophysics::04.07.05. Stress
    Repository-Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Materialart: article
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  • 2
    Publikationsdatum: 2017-04-04
    Beschreibung: In recent years, an increasing number of surveys have definitively confirmed the seasonal presence of fin whales (Balaenoptera physalus) in highly productive regions of the Mediterranean Sea. Despite this, very little is yet known about the routes that the species seasonally follows within the Mediterranean basin and, particularly, in the Ionian area. The present study assesses for the first time fin whale acoustic presence offshore Eastern Sicily (Ionian Sea), throughout the processing of about 10 months of continuous acoustic monitoring. The recording of fin whale vocalizations was made possible by the cabled deep-sea multidisciplinary observatory, “NEMO-SN1”, deployed 25 km off the Catania harbor at a depth of about 2,100 meters. NEMO-SN1 is an operational node of the European Multidisciplinary Seafloor and water-column Observatory (EMSO) Research Infrastructure. The observatory was equipped with a low-frequency hydrophone (bandwidth: 0.05 Hz–1 kHz, sampling rate: 2 kHz) which continuously acquired data from July 2012 to May 2013. About 7,200 hours of acoustic data were analyzed by means of spectrogram display. Calls with the typical structure and patterns associated to the Mediterranean fin whale population were identified and monitored in the area for the first time. Furthermore, a background noise analysis within the fin whale communication frequency band (17.9–22.5 Hz) was conducted to investigate possible detection-masking effects. The study confirms the hypothesis that fin whales are present in the Ionian Sea throughout all seasons, with peaks in call detection rate during spring and summer months. The analysis also demonstrates that calls were more frequently detected in low background noise conditions. Further analysis will be performed to understand whether observed levels of noise limit the acoustic detection of the fin whales vocalizations, or whether the animals vocalize less in the presence of high background noise.
    Beschreibung: Published
    Beschreibung: e0141838
    Beschreibung: 3A. Ambiente Marino
    Beschreibung: JCR Journal
    Beschreibung: open
    Schlagwort(e): Whales ; Bioacoustics ; Background noise (acoustics) ; Acoustic signals ; Sperm whales ; Vocalization ; Acoustics ; Data acquisition ; 03. Hydrosphere::03.01. General::03.01.08. Instruments and techniques ; 03. Hydrosphere::03.02. Hydrology::03.02.04. Measurements and monitoring ; 03. Hydrosphere::03.02. Hydrology::03.02.07. Instruments and techniques ; 03. Hydrosphere::03.04. Chemical and biological::03.04.99. General or miscellaneous
    Repository-Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Materialart: article
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  • 3
    Publikationsdatum: 2017-04-04
    Beschreibung: Although there are many methods for investigating tectonic structures, many faults remain hidden, and they can endanger the life and property of people living along them. The slopes of volcanoes are covered with such hidden faults, near which strong earthquakes and gas releases can appear. Revealing hidden faults can therefore contribute significantly to the protection of people living in volcanic areas. In the study, seven different techniques were used for making measurements of in-soil radon concentrations in order to search for hidden faults on the SE flank of the Mt. Etna volcano. These reported methods had previously been proved to be useful tools for investigating fault structures. The main aim of the experiment presented here was to evaluate the usability of these methods in the geological conditions of the Mt. Etna region, and to find the best place for continual radon monitoring using a permanent station in the near future.
    Beschreibung: Published
    Beschreibung: 70-73
    Beschreibung: 5V. Sorveglianza vulcanica ed emergenze
    Beschreibung: JCR Journal
    Beschreibung: restricted
    Schlagwort(e): Mt. Etna ; soil gas ; hidden faults ; radon ; 04. Solid Earth::04.02. Exploration geophysics::04.02.01. Geochemical exploration
    Repository-Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Materialart: article
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  • 4
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    Oxford University Press
    In:  EPIC3ICES Journal of Marine Science, Oxford University Press, 73, pp. 772-782, ISSN: 1054-3139
    Publikationsdatum: 2016-11-30
    Beschreibung: Global warming and ocean acidification are among the most important stressors for aquatic ecosystems in the future. To investigate their direct and indirect effects on a near-natural plankton community, a multiple-stressor approach is needed. Hence, we set up mesocosms in a full-factorial design to study the effects of both warming and high CO2 on a Baltic Sea autumn plankton community, concentrating on the impacts on microzooplankton (MZP). MZP abundance, biomass, and species composition were analysed over the course of the experiment. We observed that warming led to a reduced time-lag between the phytoplankton bloom and an MZP biomass maximum. MZP showed a significantly higher growth rate and an earlier biomass peak in the warm treatments while the biomass maximum was not affected. Increased pCO2 did not result in any significant effects on MZP biomass, growth rate, or species composition irrespective of the temperature, nor did we observe any significant interactions between CO2 and temperature. We attribute this to the high tolerance of this estuarine plankton community to fluctuations in pCO2, often resulting in CO2 concentrations higher than the predicted end-of-century concentration for open oceans. In contrast, warming can be expected to directly affect MZP and strengthen its coupling with phytoplankton by enhancing its grazing pressure.
    Repository-Name: EPIC Alfred Wegener Institut
    Materialart: Article , isiRev
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  • 5
    Publikationsdatum: 2022-05-25
    Beschreibung: Author Posting. © Crown Copyright, 2015. This article is posted here by permission of Oxford University Press for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 204 (2016): 1-20, doi:10.1093/gji/ggv416.
    Beschreibung: The Canada Basin and the southern Alpha-Mendeleev ridge complex underlie a significant proportion of the Arctic Ocean, but the geology of this undrilled and mostly ice-covered frontier is poorly known. New information is encoded in seismic wide-angle reflections and refractions recorded with expendable sonobuoys between 2007 and 2011. Velocity–depth samples within the sedimentary succession are extracted from published analyses for 142 of these records obtained at irregularly spaced stations across an area of 1.9E + 06 km2. The samples are modelled at regional, subregional and station-specific scales using an exponential function of inverse velocity versus depth with regionally representative parameters determined through numerical regression. With this approach, smooth, non-oscillatory velocity–depth profiles can be generated for any desired location in the study area, even where the measurement density is low. Practical application is demonstrated with a map of sedimentary thickness, derived from seismic reflection horizons interpreted in the time domain and depth converted using the velocity–depth profiles for each seismic trace. A thickness of 12–13 km is present beneath both the upper Mackenzie fan and the middle slope off of Alaska, but the sedimentary prism thins more gradually outboard of the latter region. Mapping of the observed-to-predicted velocities reveals coherent geospatial trends associated with five subregions: the Mackenzie fan; the continental slopes beyond the Mackenzie fan; the abyssal plain; the southwestern Canada Basin; and, the Alpha-Mendeleev magnetic domain. Comparison of the subregional velocity–depth models with published borehole data, and interpretation of the station-specific best-fitting model parameters, suggests that sandstone is not a predominant lithology in any of the five subregions. However, the bulk sand-to-shale ratio likely increases towards the Mackenzie fan, and the model for this subregion compares favourably with borehole data for Miocene turbidites in the eastern Gulf of Mexico. The station-specific results also indicate that Quaternary sediments coarsen towards the Beaufort-Mackenzie and Banks Island margins in a manner that is consistent with the variable history of Laurentide Ice Sheet advance documented for these margins. Lithological factors do not fully account for the elevated velocity–depth trends that are associated with the southwestern Canada Basin and the Alpha-Mendeleev magnetic domain. Accelerated porosity reduction due to elevated palaeo-heat flow is inferred for these regions, which may be related to the underlying crustal types or possibly volcanic intrusion of the sedimentary succession. Beyond exploring the variation of an important physical property in the Arctic Ocean basin, this study provides comparative reference for global studies of seismic velocity, burial history, sedimentary compaction, seismic inversion and overpressure prediction, particularly in mudrock-dominated successions.
    Schlagwort(e): Numerical approximations and analysis ; Spatial analysis ; Controlled source seismology ; Acoustic properties ; Sedimentary basin processes ; Large igneous provinces ; Crustal structure ; Arctic region
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
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  • 6
    Publikationsdatum: 2022-05-25
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 11 (2016): e0147808, doi:10.1371/journal.pone.0147808.
    Beschreibung: The amyloid precursor protein (APP) is a causal agent in the pathogenesis of Alzheimer’s disease and is a transmembrane protein that associates with membrane-limited organelles. APP has been shown to co-purify through immunoprecipitation with a kinesin light chain suggesting that APP may act as a trailer hitch linking kinesin to its intercellular cargo, however this hypothesis has been challenged. Previously, we identified an mRNA transcript that encodes a squid homolog of human APP770. The human and squid isoforms share 60% sequence identity and 76% sequence similarity within the cytoplasmic domain and share 15 of the final 19 amino acids at the C-terminus establishing this highly conserved domain as a functionally import segment of the APP molecule. Here, we study the distribution of squid APP in extruded axoplasm as well as in a well-characterized reconstituted organelle/microtubule preparation from the squid giant axon in which organelles bind microtubules and move towards the microtubule plus-ends. We find that APP associates with microtubules by confocal microscopy and co-purifies with KI-washed axoplasmic organelles by sucrose density gradient fractionation. By electron microscopy, APP clusters at a single focal point on the surfaces of organelles and localizes to the organelle/microtubule interface. In addition, the association of APP-organelles with microtubules is an ATP dependent process suggesting that the APP-organelles contain a microtubule-based motor protein. Although a direct kinesin/APP association remains controversial, the distribution of APP at the organelle/microtubule interface strongly suggests that APP-organelles have an orientation and that APP like the Alzheimer’s protein tau has a microtubule-based function.
    Beschreibung: Research reported in this publication was supported by an Institutional Development Award (IDeA) from the National Institute of General Medical Sciences of the National Institutes of Health under grant number P20GM103430.
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
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  • 7
    Publikationsdatum: 2022-05-25
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 11 (2016): e0153197, doi:10.1371/journal.pone.0153197.
    Beschreibung: Benthic dinoflagellates in the genus Gambierdiscus produce the ciguatoxin precursors responsible for the occurrence of ciguatera toxicity. The prevalence of ciguatera toxins in fish has been linked to the presence and distribution of toxin-producing species in coral reef ecosystems, which is largely determined by the presence of suitable benthic habitat and environmental conditions favorable for growth. Here using single factor experiments, we examined the effects of salinity, irradiance, and temperature on growth of 17 strains of Gambierdiscus representing eight species/phylotypes (G. belizeanus, G. caribaeus, G. carolinianus, G. carpenteri, G. pacificus, G. silvae, Gambierdiscus sp. type 4–5), most of which were established from either Marakei Island, Republic of Kiribati, or St. Thomas, United States Virgin Island (USVI). Comparable to prior studies, growth rates fell within the range of 0–0.48 divisions day-1. In the salinity and temperature studies, Gambierdiscus responded in a near Gaussian, non-linear manner typical for such studies, with optimal and suboptimal growth occurring in the range of salinities of 25 and 45 and 21.0 and 32.5°C. In the irradiance experiment, no mortality was observed; however, growth rates at 55μmol photons · m-2 · s-1 were lower than those at 110–400μmol photons · m-2 · s-1. At the extremes of the environmental conditions tested, growth rates were highly variable, evidenced by large coefficients of variability. However, significant differences in intraspecific growth rates were typically found only at optimal or near-optimal growth conditions. Polynomial regression analyses showed that maximum growth occurred at salinity and temperature levels of 30.1–38.5 and 23.8–29.2°C, respectively. Gambierdiscus growth patterns varied among species, and within individual species: G. belizeanus, G. caribaeus, G. carpenteri, and G. pacificus generally exhibited a wider range of tolerance to environmental conditions, which may explain their broad geographic distribution. In contrast, G. silvae and Gambierdiscus sp. types 4–5 all displayed a comparatively narrow range of tolerance to temperature, salinity, and irradiance.
    Beschreibung: This study was funded by the National Natural Science Foundation of China (41506137); Guangxi Natural Science Foundation (2015GXNSFCA139003), Centers for Disease Control and Prevention (U01 EH000421); USFDA (F223201000060C); NOAA NOS through the CiguaHAB program (Cooperative Agreement NA11NOS4780060, NA11NOS4780028); the Lana Vento Trust and VI-EPSCoR Program (NSF award # 346483 & 081441); and a System Fund from Key Laboratory of Environment Change and Resources Use in Beibu Gulf, Ministry of Education (2014BGERLXT01). Support was also provided by the Woods Hole Center for Oceans and Human Health through National Science Foundation (NSF) Grant OCE-1314642, National Institute of Environmental Health Sciences (NIEHS) Grant 1-P01-ES021923-014, as well as the China Scholarship Council.
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
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  • 8
    Publikationsdatum: 2022-05-25
    Beschreibung: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.
    Beschreibung: Fungal secretomes contain a wide range of hydrolytic and oxidative enzymes, including cellulases, hemicellulases, pectinases, and lignin-degrading accessory enzymes, that synergistically drive litter decomposition in the environment. While secretome studies of model organisms such as Phanerochaete chrysosporium and Aspergillus species have greatly expanded our knowledge of these enzymes, few have extended secretome characterization to environmental isolates or conducted side-by-side comparisons of diverse species. Thus, the mechanisms of carbon degradation by many ubiquitous soil fungi remain poorly understood. Here we use a combination of LC-MS/MS, genomic, and bioinformatic analyses to characterize and compare the protein composition of the secretomes of four recently isolated, cosmopolitan, Mn(II)-oxidizing Ascomycetes (Alternaria alternata SRC1lrK2f, Stagonospora sp. SRC1lsM3a, Pyrenochaeta sp. DS3sAY3a, and Paraconiothyrium sporulosum AP3s5-JAC2a). We demonstrate that the organisms produce a rich yet functionally similar suite of extracellular enzymes, with species-specific differences in secretome composition arising from unique amino acid sequences rather than overall protein function. Furthermore, we identify not only a wide range of carbohydrate-active enzymes that can directly oxidize recalcitrant carbon, but also an impressive suite of redox-active accessory enzymes that suggests a role for Fenton-based hydroxyl radical formation in indirect, non-specific lignocellulose attack. Our findings highlight the diverse oxidative capacity of these environmental isolates and enhance our understanding of the role of filamentous Ascomycetes in carbon turnover in the environment.
    Beschreibung: This work was supported by the National Science Foundation (www.nsf.gov), grant numbers EAR-1249489 and CBET-1336496, both awarded to CMH. Personal support for CAZ was also provided by Harvard University (www.harvard.edu) and by a Ford Foundation (www.fordfoundation.org) Predoctoral Fellowship administered by the National Academies.
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
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  • 9
    Publikationsdatum: 2022-05-25
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 11 (2016): e0160830, doi:10.1371/journal.pone.0160830 .
    Beschreibung: Advances in offshore wind farm (OWF) technology have recently led to their construction in coastal waters that are deep enough to be seasonally stratified. As tidal currents move past the OWF foundation structures they generate a turbulent wake that will contribute to a mixing of the stratified water column. In this study we show that the mixing generated in this way may have a significant impact on the large-scale stratification of the German Bight region of the North Sea. This region is chosen as the focus of this study since the planning of OWFs is particularly widespread. Using a combination of idealised modelling and in situ measurements, we provide order-of-magnitude estimates of two important time scales that are key to understanding the impacts of OWFs: (i) a mixing time scale, describing how long a complete mixing of the stratification takes, and (ii) an advective time scale, quantifying for how long a water parcel is expected to undergo enhanced wind farm mixing. The results are especially sensitive to both the drag coefficient and type of foundation structure, as well as the evolution of the pycnocline under enhanced mixing conditions—both of which are not well known. With these limitations in mind, the results show that OWFs could impact the large-scale stratification, but only when they occupy extensive shelf regions. They are expected to have very little impact on large-scale stratification at the current capacity in the North Sea, but the impact could be significant in future large-scale development scenarios.
    Beschreibung: Funding was provided by the Helmholtz Foundation through the Polar Regions and Coasts in the Changing Earth System II (PACES II) program.
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
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  • 10
    Publikationsdatum: 2022-05-25
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS ONE 11 (2016): e0164107, doi:10.1371/journal.pone.0164107.
    Beschreibung: Common dolphins (Delphinus delphis) are responsible for the large majority of interactions with the pole-and-line tuna fishery in the Azores but the underlying drivers remain poorly understood. In this study we investigate the influence of various environmental and fisheries-related factors in promoting the interaction of common dolphins with this fishery and estimate the resultant catch losses. We analysed 15 years of fishery and cetacean interaction data (1998–2012) collected by observers placed aboard tuna fishing vessels. Dolphins interacted in less than 3% of the fishing events observed during the study period. The probability of dolphin interaction varied significantly between years with no evident trend over time. Generalized additive modeling results suggest that fishing duration, sea surface temperature and prey abundance in the region were the most important factors explaining common dolphin interaction. Dolphin interaction had no impact on the catches of albacore, skipjack and yellowfin tuna but resulted in significantly lower catches of bigeye tuna, with a predicted median annual loss of 13.5% in the number of fish captured. However, impact on bigeye catches varied considerably both by year and fishing area. Our work shows that rates of common dolphin interaction with the pole-and-line tuna fishery in the Azores are low and showed no signs of increase over the study period. Although overall economic impact was low, the interaction may lead to significant losses in some years. These findings emphasize the need for continued monitoring and for further research into the consequences and economic viability of potential mitigation measures.
    Beschreibung: This work was funded by Fundação para a Ciência e a Tecnologia (FCT) and DRCT/SRCTE, though FEDER, the Competitiveness Factors Operational (COMPETE), QREN European Social Fund, the Portuguese Ministry for Science and Education, under research projects TRACE (PTDC/MAR/74071/2006), FCT Exploratory Project (IF/00943/2013/CP1199/CT0001), and MAPCET (M2.1.2/F/012/2011). We acknowledge the support of Fundação para a Ciência e Tecnologia (FCT), through the strategic project UID/MAR/04292/2013 granted to MARE. We thank the Azorean Regional Government for funding POPA, the Ship-owners Association and the Association of the Tuna Canning Industries for their support to the program. MJC was supported by a DRCT doctoral grant (M3.1.2/F/008/2009). MAS was supported by POPH, QREN, European Social Fund and Portuguese Ministry for Science and Education, through an FCT Investigator grant (IF/00943/2013).
    Repository-Name: Woods Hole Open Access Server
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  • 11
    Publikationsdatum: 2022-05-25
    Beschreibung: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Genome Biology and Evolution 7 (2015): 3207-3225, doi:10.1093/gbe/evv210.
    Beschreibung: High-throughput sequencing of reduced representation libraries obtained through digestion with restriction enzymes—generically known as restriction site associated DNA sequencing (RAD-seq)—is a common strategy to generate genome-wide genotypic and sequence data from eukaryotes. A critical design element of any RAD-seq study is knowledge of the approximate number of genetic markers that can be obtained for a taxon using different restriction enzymes, as this number determines the scope of a project, and ultimately defines its success. This number can only be directly determined if a reference genome sequence is available, or it can be estimated if the genome size and restriction recognition sequence probabilities are known. However, both scenarios are uncommon for nonmodel species. Here, we performed systematic in silico surveys of recognition sequences, for diverse and commonly used type II restriction enzymes across the eukaryotic tree of life. Our observations reveal that recognition sequence frequencies for a given restriction enzyme are strikingly variable among broad eukaryotic taxonomic groups, being largely determined by phylogenetic relatedness. We demonstrate that genome sizes can be predicted from cleavage frequency data obtained with restriction enzymes targeting “neutral” elements. Models based on genomic compositions are also effective tools to accurately calculate probabilities of recognition sequences across taxa, and can be applied to species for which reduced representation data are available (including transcriptomes and neutral RAD-seq data sets). The analytical pipeline developed in this study, PredRAD (https://github.com/phrh/PredRAD), and the resulting databases constitute valuable resources that will help guide the design of any study using RAD-seq or related methods.
    Beschreibung: This research was supported by the Office of Ocean Exploration and Research of the National Oceanic and Atmospheric Administration (NA09OAR4320129 to T.S.); the Division of Ocean Sciences of the National Science Foundation (OCE-1131620 to T.S.); the Astrobiology Science and Technology for Exploring Planets program of the National Aeronautics and Space Administration (NNX09AB76G to T.S.); and the Academic Programs Office (Ocean Ventures Fund to S.H.), the Ocean Exploration Institute (Fellowship support to T.M.S.), and the Ocean Life Institute of the Woods Hole Oceanographic Institution (internal grant to T.M.S. and S.H.).
    Schlagwort(e): RAD-seq ; Reduced representation sequencing ; PredRAD ; Experimental design ; Genome size prediction ; Restriction recognition sequence probability
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
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  • 12
    Publikationsdatum: 2022-05-25
    Beschreibung: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The definitive version was published in PLoS One 11 (2016): e0162401, doi:10.1371/journal.pone.0162401.
    Beschreibung: Heavy metals such as mercury (Hg) pose a significant health hazard through bioaccumulation and biomagnification. By penetrating cell membranes, heavy metal ions may lead to pathological conditions. Here we examined the responses of Ammonia parkinsoniana, a benthic foraminiferan, to different concentrations of Hg in the artificial sea water. Confocal images of untreated and treated specimens using fluorescent probes (Nile Red and Acridine Orange) provided an opportunity for visualizing the intracellular lipid accumulation and acidic compartment regulation. With increased Hg over time, we observed an increased number of lipid droplets, which may have acted as a detoxifying organelle where Hg is sequestered and biologically inactivated. Further, Hg seems to promote the proliferation of lysosomes both in terms of number and dimension that, at the highest level of Hg, resulted in cell death. We report, for the first time, the presence of Hg within the foraminiferal cell: at the basal part of pores, in the organic linings of the foramen/septa, and as cytoplasmic accumulations.
    Beschreibung: The research for this paper was partially made possible by the financial support from the PRIN 2010-2011 Ministero dell’Istruzione, dell’Università e della Ricerca (MIUR) (protocollo 2010RMTLYR) to RC. JMB acknowledges support from The Investment in Science Fund at WHOI. BG, JRE, AJ, LZ, and EMP were supported in part by the Office of Biological and Environmental Research, US Department of Energy (DOE) as part of the Mercury Science Focus Area at Oak Ridge National Laboratory, which is managed by UT-Battelle LLC for the DOE under contract DE-AC05-00OR22725.
    Repository-Name: Woods Hole Open Access Server
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  • 13
    Publikationsdatum: 2022-05-25
    Beschreibung: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 10 (2015): e0143299, doi:10.1371/journal.pone.0143299.
    Beschreibung: For phytoplankton and other microbes, nutrient receptors are often the passages through which viruses invade. This presents a bottom-up vs. top-down, co-limitation scenario; how do these would-be-hosts balance minimizing viral susceptibility with maximizing uptake of limiting nutrient(s)? This question has been addressed in the biological literature on evolutionary timescales for populations, but a shorter timescale, mechanistic perspective is lacking, and marine viral literature suggests the strong influence of additional factors, e.g. host size; while the literature on both nutrient uptake and host-virus interactions is expansive, their intersection, of ubiquitous relevance to marine environments, is understudied. I present a simple, mechanistic model from first principles to analyze the effect of this co-limitation scenario on individual growth, which suggests that in environments with high risk of viral invasion or spatial/temporal heterogeneity, an individual host’s growth rate may be optimized with respect to receptor coverage, producing top-down selective pressure on short timescales. The model has general applicability, is suggestive of hypotheses for empirical exploration, and can be extended to theoretical studies of more complex behaviors and systems.
    Beschreibung: This work was supported by the Massachusetts Institute of Technology Charles Vest Presidential Fellowship.
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  • 14
    Publikationsdatum: 2022-05-25
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nucleic Acids Research 44 (2016): e157, doi:10.1093/nar/gkw738.
    Beschreibung: Site-directed RNA editing (SDRE) is a strategy to precisely alter genetic information within mRNAs. By linking the catalytic domain of the RNA editing enzyme ADAR to an antisense guide RNA, specific adenosines can be converted to inosines, biological mimics for guanosine. Previously, we showed that a genetically encoded iteration of SDRE could target adenosines expressed in human cells, but not efficiently. Here we developed a reporter assay to quantify editing, and used it to improve our strategy. By enhancing the linkage between ADAR's catalytic domain and the guide RNA, and by introducing a mutation in the catalytic domain, the efficiency of converting a UAG premature termination codon (PTC) to tryptophan (UGG) was improved from ∼11% to ∼70%. Other PTCs were edited, but less efficiently. Numerous off-target edits were identified in the targeted mRNA, but not in randomly selected endogenous messages. Off-target edits could be eliminated by reducing the amount of guide RNA with a reduction in on-target editing. The catalytic rate of SDRE was compared with those for human ADARs on various substrates and found to be within an order of magnitude of most. These data underscore the promise of site-directed RNA editing as a therapeutic or experimental tool.
    Beschreibung: National Institutes of Health [1R0111223855, 1R01NS64259]; Cystic Fibrosis Foundation Therapeutics [Rosent14XXO]; Infrastructural support was provided by the National Institutes of Health [NIGMS 1P20GM103642, NIMHD 8G12-MD007600]; National Science Foundation [DBI 0115825, DBI 1337284]; Department of Defense [52680-RT-ISP].
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  • 15
    Publikationsdatum: 2022-05-25
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 11 (2016): e0146977, doi:10.1371/journal.pone.0146977 .
    Beschreibung: The article reports the radiocarbon investigation of Anzapalivoro, the largest za baobab (Adansonia za) specimen of Madagascar and of another za, namely the Big cistern baobab. Several wood samples collected from the large inner cavity and from the outer part/exterior of the tree were investigated by AMS (accelerator mass spectrometry) radiocarbon dating. For samples collected from the cavity walls, the age values increase with the distance into the wood up to a point of maximum age, after which the values decrease toward the outer part. This anomaly of age sequences indicates that the inner cavity of Anzapalivoro is a false cavity, practically an empty space between several fused stems disposed in a ring-shaped structure. The radiocarbon date of the oldest sample was 780 ± 30 bp, which corresponds to a calibrated age of around 735 yr. Dating results indicate that Anzapalivoro has a closed ring-shaped structure, which consists of 5 fused stems that close a false cavity. The oldest part of the biggest za baobab has a calculated age of 900 years. We also disclose results of the investigation of a second za baobab, the Big cistern baobab, which was hollowed out for water storage. This specimen, which consists of 4 fused stems, was found to be around 260 years old.
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  • 16
    Publikationsdatum: 2022-05-25
    Beschreibung: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The definitive version was published in PLoS One 11 (2016): e0154208, doi: 10.1371/journal.pone.0154208
    Beschreibung: Some species of butterflyfish have had preyed upon corals for millions of years, yet the mechanism of butterflyfish specialized coral feeding strategy remains poorly understood. Certain butterflyfish have the ability to feed on allelochemically rich soft corals, e.g. Sinularia maxima. Cytochrome P450 (CYP) is the predominant enzyme system responsible for the detoxification of dietary allelochemicals. CYP2-like and CYP3A-like content have been associated with butterflyfish that preferentially consumes allelochemically rich soft corals. To investigate the role of butterflyfish CYP2 and CYP3A enzymes in dietary preference, we conducted oral feeding experiments using homogenates of S. maxima and a toxin isolated from the coral in four species of butterflyfish with different feeding strategies. After oral exposure to the S. maxima toxin 5-episinulaptolide (5ESL), which is not normally encountered in the Hawaiian butterflyfish diet, an endemic specialist, Chaetodon multicinctus experienced 100% mortality compared to a generalist, Chaetodon auriga, which had significantly more (3–6 fold higher) CYP3A-like basal content and catalytic activity. The specialist, Chaetodon unimaculatus, which preferentially feed on S. maxima in Guam, but not in Hawaii, had 100% survival, a significant induction of 8–12 fold CYP3A-like content, and an increased ability (2-fold) to metabolize 5ESL over other species. Computer modeling data of CYP3A4 with 5ESL were consistent with microsomal transformation of 5ESL to a C15-16 epoxide from livers of C. unimaculatus. Epoxide formation correlated with CYP3A-like content, catalytic activity, induction, and NADPH-dependent metabolism of 5ESL. These results suggest a potentially important role for the CYP3A family in butterflyfish-coral diet selection through allelochemical detoxification.
    Beschreibung: This work received support from the following sources: Resource Allocation Program of the Agricultural Research Station for UCR to DS; Summer funding by Hilda and George Liebig Environmental Sciences Summer Fellowship and travel grant Albert March Environmental Sciences Scholarship from the University of California, Riverside; and the Chemistry and DMPK CORE of COBRE, P20GM104932 from the National Institute of General Medical Sciences (NIGMS), a component of the National Institutes of Health (NIH) supported the chemistry studies.
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  • 17
    Publikationsdatum: 2022-05-25
    Beschreibung: This is an open access article, free of all copyright. The definitive version was published in PLoS ONE 11 (2016): e0164979, doi: 10.1371/journal.pone.0164979.
    Beschreibung: Understanding and managing dynamic coastal landscapes for beach-dependent species requires biological and geological data across the range of relevant environments and habitats. It is difficult to acquire such information; data often have limited focus due to resource constraints, are collected by non-specialists, or lack observational uniformity. We developed an open-source smartphone application called iPlover that addresses these difficulties in collecting biogeomorphic information at piping plover (Charadrius melodus) nest sites on coastal beaches. This paper describes iPlover development and evaluates data quality and utility following two years of collection (n = 1799 data points over 1500 km of coast between Maine and North Carolina, USA). We found strong agreement between field user and expert assessments and high model skill when data were used for habitat suitability prediction. Methods used here to develop and deploy a distributed data collection system have broad applicability to interdisciplinary environmental monitoring and modeling.
    Beschreibung: This work was supported by the North Atlantic Landscape Conservation Cooperative through the U.S. Department of the Interior Hurricane Sandy recovery program under the Disaster Relief Appropriations Act of 2013, and the U.S. Geological Survey Coastal and Marine Geology Program.
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  • 18
    Publikationsdatum: 2022-05-26
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS 11 (2016): e0149998, doi:10.1371/journal.pone.0149998.
    Beschreibung: Individuals with cystic fibrosis (CF) often acquire chronic lung infections that lead to irreversible damage. We sought to examine regional variation in the microbial communities in the lungs of individuals with mild-to-moderate CF lung disease, to examine the relationship between the local microbiota and local damage, and to determine the relationships between microbiota in samples taken directly from the lung and the microbiota in spontaneously expectorated sputum. In this initial study, nine stable, adult CF patients with an FEV1〉50% underwent regional sampling of different lobes of the right lung by bronchoalveolar lavage (BAL) and protected brush (PB) sampling of mucus plugs. Sputum samples were obtained from six of the nine subjects immediately prior to the procedure. Microbial community analysis was performed on DNA extracted from these samples and the extent of damage in each lobe was quantified from a recent CT scan. The extent of damage observed in regions of the right lung did not correlate with specific microbial genera, levels of community diversity or composition, or bacterial genome copies per ml of BAL fluid. In all subjects, BAL fluid from different regions of the lung contained similar microbial communities. In eight out of nine subjects, PB samples from different regions of the lung were also similar in microbial community composition, and were similar to microbial communities in BAL fluid from the same lobe. Microbial communities in PB samples were more diverse than those in BAL samples, suggesting enrichment of some taxa in mucus plugs. To our knowledge, this study is the first to examine the microbiota in different regions of the CF lung in clinically stable individuals with mild-to-moderate CF-related lung disease.
    Beschreibung: Support from the Cystic Fibrosis Foundation Research Development Program (STANTO07R0) as a pilot grant to DAH and AA. Research reported in this publication was also supported by grants from the National Institutes of Health to DAH (R01 AI091702 to DAH) and the American Asthma Foundation Scholars Award and CFFT-ASHARE15A0 and R01HL122372 to AA and R01 HL074175 (BAS). The Dartmouth Lung Biology Center and CF Translational Research Core was supported by an Institutional Development Award (IDeA) from the National Institute of General Medical Sciences of the National Institutes of Health under grant number P30GM106394 and by the CFF RDP (CFRDP STANTO11R0).
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  • 19
    Publikationsdatum: 2022-05-26
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS 11 (2016): e0150660, doi:10.1371/journal.pone.0150660.
    Beschreibung: Sperm whales are present in the Canary Islands year-round, suggesting that the archipelago is an important area for this species in the North Atlantic. However, the area experiences one of the highest reported rates of sperm whale ship-strike in the world. Here we investigate if the number of sperm whales found in the archipelago can sustain the current rate of ship-strike mortality. The results of this study may also have implications for offshore areas where concentrations of sperm whales may coincide with high densities of ship traffic, but where ship-strikes may be undocumented. The absolute abundance of sperm whales in an area of 52933 km2, covering the territorial waters of the Canary Islands, was estimated from 2668 km of acoustic line-transect survey using Distance sampling analysis. Data on sperm whale diving and acoustic behaviour, obtained from bio-logging, were used to calculate g(0) = 0.92, this is less than one because of occasional extended periods when whales do not echolocate. This resulted in an absolute abundance estimate of 224 sperm whales (95% log-normal CI 120–418) within the survey area. The recruitment capability of this number of whales, some 2.5 whales per year, is likely to be exceeded by the current ship-strike mortality rate. Furthermore, we found areas of higher whale density within the archipelago, many coincident with those previously described, suggesting that these are important habitats for females and immature animals inhabiting the archipelago. Some of these areas are crossed by active shipping lanes increasing the risk of ship-strikes. Given the philopatry in female sperm whales, replacement of impacted whales might be limited. Therefore, the application of mitigation measures to reduce the ship-strike mortality rate seems essential for the conservation of sperm whales in the Canary Islands.
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  • 20
    Publikationsdatum: 2022-05-26
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS 11 (2016): e0151089, doi: 10.1371/journal.pone.0151089 .
    Beschreibung: The majority of ovarian tumors eventually recur in a drug resistant form. Using cisplatin sensitive and resistant cell lines assembled into 3D spheroids we profiled gene expression and identified candidate mechanisms and biological pathways associated with cisplatin resistance. OVCAR-8 human ovarian carcinoma cells were exposed to sub-lethal concentrations of cisplatin to create a matched cisplatin-resistant cell line, OVCAR-8R. Genome-wide gene expression profiling of sensitive and resistant ovarian cancer spheroids identified 3,331 significantly differentially expressed probesets coding for 3,139 distinct protein-coding genes (Fc 〉2, FDR 〈 0.05) (S2 Table). Despite significant expression changes in some transporters including MDR1, cisplatin resistance was not associated with differences in intracellular cisplatin concentration. Cisplatin resistant cells were significantly enriched for a mesenchymal gene expression signature. OVCAR-8R resistance derived gene sets were significantly more biased to patients with shorter survival. From the most differentially expressed genes, we derived a 17-gene expression signature that identifies ovarian cancer patients with shorter overall survival in three independent datasets. We propose that the use of cisplatin resistant cell lines in 3D spheroid models is a viable approach to gain insight into resistance mechanisms relevant to ovarian tumors in patients. Our data support the emerging concept that ovarian cancers can acquire drug resistance through an epithelial-to-mesenchymal transition.
    Beschreibung: This work was funded by the NIH NCRR supplement grant P41 RR001395-27S1 (J.W.H.), NSF DBI-1005378 “REU Site: Biological Discovery in Woods Hole”, faculty startup funds from the Office of Research at Oklahoma State University (W.C.), and the Mary Kay Foundation (A.S.B.).
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  • 21
    Publikationsdatum: 2022-05-26
    Beschreibung: Author Posting. © Oxford University Press, 2016. This article is posted here by permission of Oxford University Press for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 205 (2016): 728-743, doi:10.1093/gji/ggw044.
    Beschreibung: While elasticity is a defining characteristic of the Earth's lithosphere, it is often ignored in numerical models of long-term tectonic processes in favour of a simpler viscoplastic description. Here we assess the consequences of this assumption on a well-studied geodynamic problem: the growth of normal faults at an extensional plate boundary. We conduct 2-D numerical simulations of extension in elastoplastic and viscoplastic layers using a finite difference, particle-in-cell numerical approach. Our models simulate a range of faulted layer thicknesses and extension rates, allowing us to quantify the role of elasticity on three key observables: fault-induced topography, fault rotation, and fault life span. In agreement with earlier studies, simulations carried out in elastoplastic layers produce rate-independent lithospheric flexure accompanied by rapid fault rotation and an inverse relationship between fault life span and faulted layer thickness. By contrast, models carried out with a viscoplastic lithosphere produce results that may qualitatively resemble the elastoplastic case, but depend strongly on the product of extension rate and layer viscosity U × ηL. When this product is high, fault growth initially generates little deformation of the footwall and hanging wall blocks, resulting in unrealistic, rigid block-offset in topography across the fault. This configuration progressively transitions into a regime where topographic decay associated with flexure is fully accommodated within the numerical domain. In addition, high U × ηL favours the sequential growth of multiple short-offset faults as opposed to a large-offset detachment. We interpret these results by comparing them to an analytical model for the fault-induced flexure of a thin viscous plate. The key to understanding the viscoplastic model results lies in the rate-dependence of the flexural wavelength of a viscous plate, and the strain rate dependence of the force increase associated with footwall and hanging wall bending. This behaviour produces unrealistic deformation patterns that can hinder the geological relevance of long-term rifting models that assume a viscoplastic rheology.
    Beschreibung: This work was supported by NSF grants OCE-11-54238 (JAO, MDB), EAR-10-10432 (MDB) and OCE-11-55098 (GI), as well as a WHOI Deep Exploration Institute grant and start-up support from the University of Idaho (EM).
    Schlagwort(e): Mid-ocean ridge processes ; Continental tectonics: extensional ; Lithospheric flexure ; Mechanics, theory, and modelling
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  • 22
    Publikationsdatum: 2022-05-26
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Conservation Physiology 4 (2016): cow014, doi:10.1093/conphys/cow014.
    Beschreibung: Reproduction of mysticete whales is difficult to monitor, and basic parameters, such as pregnancy rate and inter-calving interval, remain unknown for many populations. We hypothesized that baleen plates (keratinous strips that grow downward from the palate of mysticete whales) might record previous pregnancies, in the form of high-progesterone regions in the sections of baleen that grew while the whale was pregnant. To test this hypothesis, longitudinal baleen progesterone profiles from two adult female North Atlantic right whales (Eubalaena glacialis) that died as a result of ship strike were compared with dates of known pregnancies inferred from calf sightings and post-mortem data. We sampled a full-length baleen plate from each female at 4 cm intervals from base (newest baleen) to tip (oldest baleen), each interval representing ∼60 days of baleen growth, with high-progesterone areas then sampled at 2 or 1 cm intervals. Pulverized baleen powder was assayed for progesterone using enzyme immunoassay. The date of growth of each sampling location on the baleen plate was estimated based on the distance from the base of the plate and baleen growth rates derived from annual cycles of stable isotope ratios. Baleen progesterone profiles from both whales showed dramatic elevations (two orders of magnitude higher than baseline) in areas corresponding to known pregnancies. Baleen hormone analysis shows great potential for estimation of recent reproductive history, inter-calving interval and general reproductive biology in this species and, possibly, in other mysticete whales.
    Beschreibung: This work was supported by the Eppley Foundation for Research, the National Oceanographic and Atmospheric Administration Marine Mammal Health and Stranding Program and the Woods Hole Oceanographic Institution Ocean Life Institute.
    Schlagwort(e): Baleen ; Cetacea ; Marine mammals ; Pregnancy ; Progesterone ; Reproduction
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  • 23
    Publikationsdatum: 2022-05-26
    Beschreibung: This article is distributed under the terms of the Creative Commons public domain dedication. The definitive version was published in PLoS One 11 (2016): e0158495, doi:10.1371/journal.pone.0158495.
    Beschreibung: The number of fluorescent labels that can unambiguously be distinguished in a single image when acquired through band pass filters is severely limited by the spectral overlap of available fluorophores. The recent development of spectral microscopy and the application of linear unmixing algorithms to spectrally recorded image data have allowed simultaneous imaging of fluorophores with highly overlapping spectra. However, the number of distinguishable fluorophores is still limited by the unavoidable decrease in signal to noise ratio when fluorescence signals are fractionated over multiple wavelength bins. Here we present a spectral image analysis algorithm to greatly expand the number of distinguishable objects labeled with binary combinations of fluorophores. Our algorithm utilizes a priori knowledge about labeled specimens and imposes a binary label constraint on the unmixing solution. We have applied our labeling and analysis strategy to identify microbes labeled by fluorescence in situ hybridization and here demonstrate the ability to distinguish 120 differently labeled microbes in a single image.
    Beschreibung: This work was supported by Grant 2007-3- 13 from the Alfred P. Sloan Foundation (to GGB), National Institutes of Health Grant 1RC1-DE020630 from the National Institute of Dental and Craniofacial Research (NIDCR) (to GGB) and by National Institutes of Health Fellowship 1F31-DE019576 from NIDCR (to AMV).
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  • 24
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    Publikationsdatum: 2022-05-26
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS 11 (2016): e0150820, doi:10.1371/journal.pone.0150820.
    Beschreibung: Methanol is a major volatile organic compound on Earth and serves as an important carbon and energy substrate for abundant methylotrophic microbes. Previous geochemical surveys coupled with predictive models suggest that the marine contributions are exceedingly large, rivaling terrestrial sources. Although well studied in terrestrial ecosystems, methanol sources are poorly understood in the marine environment and warrant further investigation. To this end, we adapted a Purge and Trap Gas Chromatography/Mass Spectrometry (P&T-GC/MS) method which allowed reliable measurements of methanol in seawater and marine phytoplankton cultures with a method detection limit of 120 nanomolar. All phytoplankton tested (cyanobacteria: Synechococcus spp. 8102 and 8103, Trichodesmium erythraeum, and Prochlorococcus marinus), and Eukarya (heterokont diatom: Phaeodactylum tricornutum, coccolithophore: Emiliania huxleyi, cryptophyte: Rhodomonas salina, and non-diatom heterokont: Nannochloropsis oculata) produced methanol, ranging from 0.8–13.7 micromolar in culture and methanol per total cellular carbon were measured in the ranges of 0.09–0.3%. Phytoplankton culture time-course measurements displayed a punctuated production pattern with maxima near early stationary phase. Stabile isotope labeled bicarbonate incorporation experiments confirmed that methanol was produced from phytoplankton biomass. Overall, our findings suggest that phytoplankton are a major source of methanol in the upper water column of the world’s oceans.
    Beschreibung: This project was solely supported by a grant to TJM from the National Science Foundation (Award# CHE-OCE 1131415).
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  • 25
    Publikationsdatum: 2022-05-26
    Beschreibung: © The Author(s), 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in PLoS One 11 (2016): e0160080, doi: 10.1371/journal.pone.0160080 .
    Beschreibung: Pilot whales are two cetacean species (Globicephala melas and G. macrorhynchus) whose distributions are correlated with water temperature and partially overlap in some areas like the North Atlantic Ocean. In the context of global warming, distribution range shifts are expected to occur in species affected by temperature. Consequently, a northward displacement of the tropical pilot whale G. macrorynchus is expected, eventually leading to increased secondary contact areas and opportunities for interspecific hybridization. Here, we describe genetic evidences of recurrent hybridization between pilot whales in northeast Atlantic Ocean. Based on mitochondrial DNA sequences and microsatellite loci, asymmetric introgression of G. macrorhynchus genes into G. melas was observed. For the latter species, a significant correlation was found between historical population growth rate estimates and paleotemperature oscillations. Introgressive hybridization, current temperature increases and lower genetic variation in G. melas suggest that this species could be at risk in its northern range. Under increasing environmental and human-mediated stressors in the North Atlantic Ocean, it seems recommendable to develop a conservation program for G. melas.
    Beschreibung: LM had a PCTI Grant from the Asturias Regional Government, referenced BP 10-004. MAS was supported by a 2013 FCT Investigator contract through POPH, QREN European Social Fund and the Portuguese Ministry for Science and Education. This study was also supported by a grant from the Principality of Asturias (reference: GRUPIN-2014-093).
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  • 26
    Publikationsdatum: 2022-05-26
    Beschreibung: Author Posting. © The Author(s), 2016. This article is posted here by permission of The Royal Astronomical Society for personal use, not for redistribution. The definitive version was published in Geophysical Journal International 205 (2016): 785-795, doi:10.1093/gji/ggw036.
    Beschreibung: An L-configured, three-component short period seismic array was deployed on the Ross Ice Shelf, Antarctica during November 2014. Polarization analysis of ambient noise data from these stations shows linearly polarized waves for frequency bands between 0.2 and 2 Hz. A spectral peak at about 1.6 Hz is interpreted as the resonance frequency of the water column and is used to estimate the water layer thickness below the ice shelf. The frequency band from 4 to 18 Hz is dominated by Rayleigh and Love waves propagating from the north that, based on daily temporal variations, we conclude were generated by field camp activity. Frequency–slowness plots were calculated using beamforming. Resulting Love and Rayleigh wave dispersion curves were inverted for the shear wave velocity profile within the firn and ice to ∼150 m depth. The derived density profile allows estimation of the pore close-off depth and the firn–air content thickness. Separate inversions of Rayleigh and Love wave dispersion curves give different shear wave velocity profiles within the firn. We attribute this difference to an effective anisotropy due to fine layering. The layered structure of firn, ice, water and the seafloor results in a characteristic dispersion curve below 7 Hz. Forward modelling the observed Rayleigh wave dispersion curves using representative firn, ice, water and sediment structures indicates that Rayleigh waves are observed when wavelengths are long enough to span the distance from the ice shelf surface to the seafloor. The forward modelling shows that analysis of seismic data from an ice shelf provides the possibility of resolving ice shelf thickness, water column thickness and the physical properties of the ice shelf and underlying seafloor using passive-source seismic data.
    Beschreibung: PDB, AD and PG were supported by NSF Grant PLR 1246151. RAS was supported by NSF Grant PLR-1246416. DAW, RA and AN were supported under NSF Grants PLR-1142518, 1141916 and 1142126, respectively. PDB also received support from the California Department of Parks and Recreation, Division of Boating and Waterways under contract 11-106-107.
    Schlagwort(e): Glaciology ; Surface waves and free oscillations ; Seismic anisotropy ; Antarctica
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  • 27
    Publikationsdatum: 2022-05-26
    Beschreibung: © International Council for the Exploration of the Sea, 2016. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in ICES Journal of Marine Science 73 (2016): 1839-1850, doi: 10.1093/icesjms/fsw086.
    Beschreibung: For terrestrial and marine benthic ecologists, landscape ecology provides a framework to address issues of complexity, patchiness, and scale—providing theory and context for ecosystem based management in a changing climate. Marine pelagic ecosystems are likewise changing in response to warming, changing chemistry, and resource exploitation. However, unlike spatial landscapes that migrate slowly with time, pelagic seascapes are embedded in a turbulent, advective ocean. Adaptations from landscape ecology to marine pelagic ecosystem management must consider the nature and scale of biophysical interactions associated with organisms ranging from microbes to whales, a hierarchical organization shaped by physical processes, and our limited capacity to observe and monitor these phenomena across global oceans. High frequency, multiscale, and synoptic characterization of the 4-D variability of seascapes are now available through improved classification methods, a maturing array of satellite remote sensing products, advances in autonomous sampling of multiple levels of biological complexity, and emergence of observational networks. Merging of oceanographic and ecological paradigms will be necessary to observe, manage, and conserve species embedded in a dynamic seascape mosaic, where the boundaries, extent, and location of features change with time.
    Beschreibung: This work was supported by NASA grant NNX14AP62A “National Marine Sanctuaries as Sentinel Sites for a Demonstration Marine Biodiversity Observation Network (MBON)” funded under the National Ocean Partnership Program (NOPP RFP NOAA-NOS-IOOS-2014-2003803 in partnership between NOAA, BOEM, and NASA), the NOAA Integrated Ocean Observing System (IOOS) Program Office, and the LenFest Ocean Program.
    Schlagwort(e): Biodiversity ; Conservation ; Landscape ; Ocean observations ; Pelagic ; Phytoplankton ; Seascape
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  • 28
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Stefan Rex, Flavio S. Nogueira, and Asle Sudbø The magnetoelectric effect predicted in topological insulators makes heterostructures that combine magnetic materials and such insulators promising candidates for spintronics applications. Here, we theoretically consider a setup that exhibits two well-separated interfaces between a topological insul… [Phys. Rev. B 94, 020404(R)] Published Thu Jul 07, 2016
    Schlagwort(e): Magnetism
    Print ISSN: 1098-0121
    Digitale ISSN: 1095-3795
    Thema: Physik
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  • 29
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): A. K. Choquette, C. R. Smith, R. J. Sichel-Tissot, E. J. Moon, M. D. Scafetta, E. Di Gennaro, F. Miletto Granozio, E. Karapetrova, and S. J. May The control of octahedral rotations in perovskite heterostructures is an emerging strategy for inducing new functionality as evidenced by recent predictions of improper ferroelectricity, polar metals, and multiferroics. Many of these predictions are predicated on the presence of a specific rotation pattern ( a − a − c + ) in superlattices that exhibit the orthorhombic ( P b n m ) perovskite structural variant. The authors use synchrotron diffraction to measure the octahedral rotation patterns in strained ferrite, manganite, and gallate perovskite films finding that compressive strain strongly favors a + a − c − rotation patterns and tensile strain weakly favors a − a − c + structures. In contrast, films grown on orthorhombic substrates exhibit the same rotation pattern orientation as the substrate, even for epitaxial conditions where strain would favor the opposite structural orientation. The results indicate that substrate imprinting is a more robust method than strain for controlling the rotation pattern in P b n m -type perovskite films, a finding that should enable more efficient experimental pursuits of rotation-driven ferroic states in oxide heterostructures. [Phys. Rev. B 94, 024105] Published Thu Jul 07, 2016
    Schlagwort(e): Structure, structural phase transitions, mechanical properties, defects
    Print ISSN: 1098-0121
    Digitale ISSN: 1095-3795
    Thema: Physik
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  • 30
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): E.-M. Anton, S. Granville, A. Engel, S. V. Chong, M. Governale, U. Zülicke, A. G. Moghaddam, H. J. Trodahl, F. Natali, S. Vézian, and B. J. Ruck Ferromagnetism and superconductivity are two generally incompatible states of matter. Their coexistence has been observed only under very unusual circumstances and so far only in metals. In contrast, most semiconductors are not naturally magnetic or superconducting, but introducing magnetism or superconductivity into semiconductors is seen as an important step towards radical improvement of our electronics capabilities and therefore a hotly pursued goal. Here, the authors report the discovery of superconductivity coexisting with ferromagnetism in the semiconducting material samarium nitride (SmN). The large intrinsic exchange splitting of the conduction band in SmN requires the superconducting order to be of unconventional (likely p -wave) type. Superconductivity is observed to be even further enhanced in superlattices where layers of SmN alternate with layers made of the strongly ferromagnetic but non-superconducting material gadolinium nitride. These features render SmN an interesting laboratory for understanding more about the fundamentals of ferromagnetism and superconductivity in semiconductors and exploring opportunities for integrating superconducting spintronics into the design of semiconductor-based electronic devices. [Phys. Rev. B 94, 024106] Published Thu Jul 07, 2016
    Schlagwort(e): Structure, structural phase transitions, mechanical properties, defects
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  • 31
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Fadi Sun, Jinwu Ye, and Wu-Ming Liu In this paper, we study the rotated ferromagnetic Heisenberg model (RFHM) in two different transverse fields, h x and h z , which can be intuitively visualized as studying spin-orbit coupling (SOC) effects in two-dimensional (2D) Ising or anisotropic X Y model in a transverse field. At a special SOC cla… [Phys. Rev. B 94, 024409] Published Thu Jul 07, 2016
    Schlagwort(e): Magnetism
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  • 32
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Lars Bjaalie, Anderson Janotti, Burak Himmetoglu, and Chris G. Van de Walle Complex-oxide interfaces can give rise to two-dimensional electron gases (2DEGs) with extremely high densities: for SrTiO 3 / GdTiO 3 (STO/GTO), a density of 1/2 electron per unit-cell area is found within the STO. In this work we use first-principles calculations to study GTO/STO/GTO heterostructures, … [Phys. Rev. B 94, 035115] Published Thu Jul 07, 2016
    Schlagwort(e): Electronic structure and strongly correlated systems
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  • 33
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Jörg Bünemann, Thorben Linneweber, Ute Löw, Frithjof B. Anders, and Florian Gebhard We employ the Gutzwiller variational approach to investigate the interplay of Coulomb interaction and spin-orbit coupling in a three-orbital Hubbard model. Already in the paramagnetic phase we find a substantial renormalization of the spin-orbit coupling that enters the effective single-particle Ham… [Phys. Rev. B 94, 035116] Published Thu Jul 07, 2016
    Schlagwort(e): Electronic structure and strongly correlated systems
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  • 34
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Maxim Trushin, Mark Oliver Goerbig, and Wolfgang Belzig We develop an analytically solvable model able to qualitatively explain nonhydrogenic exciton spectra observed recently in two-dimensional (2D) semiconducting transition-metal dichalcogenides. Our exciton Hamiltonian explicitly includes additional angular momentum associated with the pseudospin degr… [Phys. Rev. B 94, 041301(R)] Published Thu Jul 07, 2016
    Schlagwort(e): Semiconductors II: surfaces, interfaces, microstructures, and related topics
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  • 35
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Anthony G. Duarte, Orlando Oliveira, and Paulo J. Silva The dependence of the Landau gauge two-point gluon and ghost correlation functions on the lattice spacing and on the physical volume are investigated for pure SU(3) Yang-Mills theory in four dimensions using lattice simulations. We present data from very large lattices up to 128 4 and for two lattice… [Phys. Rev. D 94, 014502] Published Fri Jul 08, 2016
    Schlagwort(e): Lattice Methods
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  • 36
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Takahiro Morimoto and Naoto Nagaosa We study excitonic processes second order in the electric fields in noncentrosymmetric crystals. We derive formulas for shift current and second harmonic generation produced by exciton creation, by using the Floquet formalism combined with the Keldysh Green's function method. It is shown that (i) th… [Phys. Rev. B 94, 035117] Published Thu Jul 07, 2016
    Schlagwort(e): Electronic structure and strongly correlated systems
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  • 37
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): V. P. Gonçalves, B. D. Moreira, F. S. Navarra, and D. Spiering In this paper, we study leading neutron production in photon-hadron interactions that take place in p p and p A collisions at large impact parameters. Using a model that describes the recent leading neutron data at HERA, we consider exclusive vector meson production in association with a leading neutr… [Phys. Rev. D 94, 014009] Published Thu Jul 07, 2016
    Schlagwort(e): Strong Interactions
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  • 38
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Rafael C. Nunes, Supriya Pan, and Emmanuel N. Saridakis We use the latest compilation of observational Hubble parameter measurements estimated with the differential evolution of cosmic chronometers, in combination with the local value of the Hubble constant recently measured with 2.4% precision, to constrain the cosmological scenario where dark energy in… [Phys. Rev. D 94, 023508] Published Thu Jul 07, 2016
    Schlagwort(e): Cosmology
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  • 39
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Marina Cermeño, M. Ángeles Pérez-García, and Joseph Silk We calculate the mean free path in a hot and dense nuclear environment for a fermionic dark matter particle candidate in the ∼ GeV mass range interacting with nucleons via scalar and vector effective couplings. We focus on the effects of density and temperature in the nuclear medium in order to evalu… [Phys. Rev. D 94, 023509] Published Thu Jul 07, 2016
    Schlagwort(e): Cosmology
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  • 40
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): M. Astorino, G. Compère, R. Oliveri, and N. Vandevoorde The explicit solution for a Kerr-Newman black hole immersed in an external magnetic field, sometimes called the Melvin-Kerr-Newman black hole, has been derived by Ernst and Wild in 1976. In this paper, we clarify the first law and Smarr formula for black holes in a magnetic field. We then define the… [Phys. Rev. D 94, 024019] Published Thu Jul 07, 2016
    Schlagwort(e): General Relativity and Gravitation
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  • 41
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Yue Dai, Zhejun Shen, and Yu Shi We consider quantum entanglement of three accelerating qubits, each of which is locally coupled with a real scalar field, without causal influence among the qubits or among the fields. The initial states are assumed to be the GHZ and W states, which are the two representative three-partite entangled… [Phys. Rev. D 94, 025012] Published Thu Jul 07, 2016
    Schlagwort(e): Field Theory, Formal Particle Theory
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  • 42
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): George Moutsopoulos We show how, by assuming at least eight real timelike supersymmetries in the maximally supersymmetric three-dimensional ungauged supergravity and a further simplifying ansatz, we are naturally led to a pair of Liouville field equations. These are solvable in terms of two meromorphic functions, and w… [Phys. Rev. D 94, 025013] Published Thu Jul 07, 2016
    Schlagwort(e): Field Theory, Formal Particle Theory
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  • 43
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Yago Bea, Niko Jokela, and Alfonso V. Ramallo We study the properties of a D6-brane probe in the Aharony-Bergman-Jafferis-Maldacena (ABJM) background with smeared massless dynamical quarks in the Veneziano limit. Working at zero temperature and nonvanishing charge density, we show that the system undergoes a quantum phase transition in which th… [Phys. Rev. D 94, 026003] Published Thu Jul 07, 2016
    Schlagwort(e): String Theory
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  • 44
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    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Sergio Chibbaro and Christophe Josserand We investigate the onset of intermittency for vibrating elastic plate turbulence in the framework of the weak wave turbulence theory using a numerical approach. The spectrum of the displacement field and the structure functions of the fluctuations are computed for different forcing amplitudes. At lo… [Phys. Rev. E 94, 011101(R)] Published Fri Jul 08, 2016
    Schlagwort(e): Fluid Dynamics
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  • 45
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Ilja Doršner, Svjetlana Fajfer, and Nejc Košnik We advocate the possibility that the observed diphoton excess at 750 GeV at the LHC can be addressed by the scalar field that is a part of the S U ( 5 ) symmetry breaking sector. The field in question is the Standard Model singlet that resides in the adjoint representation that breaks S U ( 5 ) down to S U ( 3 … [Phys. Rev. D 94, 015009] Published Thu Jul 07, 2016
    Schlagwort(e): Beyond the Standard Model
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  • 46
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    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Adam Falkowski and Jernej F. Kamenik The diphoton excess around m X = 750     GeV observed by ATLAS and CMS can be interpreted as coming from a massive spin-2 excitation. We explore this possibility in the context of warped five-dimensional models with the Standard Model (SM) fields propagating in the bulk of the extra dimension. The 750 GeV… [Phys. Rev. D 94, 015008] Published Thu Jul 07, 2016
    Schlagwort(e): Beyond the Standard Model
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  • 47
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Kenny C. Y. Ng, John F. Beacom, Annika H. G. Peter, and Carsten Rott The solar disk is a bright gamma-ray source. Surprisingly, its flux is about 1 order of magnitude higher than predicted. As a first step toward understanding the physical origin of this discrepancy, we perform a new analysis in 1–100 GeV using 6 years of public Fermi-LAT data. Compared to the previo… [Phys. Rev. D 94, 023004] Published Thu Jul 07, 2016
    Schlagwort(e): Astrophysics
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  • 48
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Saroj Kumar Nandi and Sriram Ramaswamy We study the growth kinetics of glassy correlations in a structural glass by monitoring the evolution, within mode-coupling theory, of a suitably defined three-point function χ C ( t , t w ) with time t and waiting time t w . From the complete wave-vector-dependent equations of motion for domain growth, we p… [Phys. Rev. E 94, 012607] Published Thu Jul 07, 2016
    Schlagwort(e): Colloids, Complex Fluids, and Active Matter
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  • 49
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): V. K. Chandrasekar, R. Gopal, D. V. Senthilkumar, and M. Lakshmanan We report the emergence of a collective dynamical state, namely, the phase-flip chimera, from an ensemble of identical nonlinear oscillators that are coupled indirectly via the dynamical variables from a common environment, which in turn are nonlocally coupled. The phase-flip chimera is characterize… [Phys. Rev. E 94, 012208] Published Thu Jul 07, 2016
    Schlagwort(e): Nonlinear Dynamics and Chaos
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  • 50
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Oleg Borisenko, Volodymyr Chelnokov, Francesca Cuteri, and Alessandro Papa It is argued that two-dimensional U ( N ) spin models for any N undergo a Berezinskii-Kosterlitz-Thouless (BKT)-like phase transition, similarly to the famous X Y model. This conclusion follows from the Berezinskii-like calculation of the two-point correlation function in U ( N ) models, approximate renorm… [Phys. Rev. E 94, 012108] Published Thu Jul 07, 2016
    Schlagwort(e): Statistical Physics
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  • 51
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): V. I. Yukalov Statistical systems composed of atoms interacting with each other trough nonintegrable interaction potentials are considered. Examples of these potentials are hard-core potentials and long-range potentials, for instance, the Lennard-Jones and dipolar potentials. The treatment of such potentials is k… [Phys. Rev. E 94, 012106] Published Thu Jul 07, 2016
    Schlagwort(e): Statistical Physics
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  • 52
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): T. P. Lyubimova, D. V. Lyubimov, D. T. Baydina, E. A. Kolchanova, and K. B. Tsiberkin The linear stability of plane-parallel flow of an incompressible viscous fluid over a saturated porous layer is studied to model the instability of water flow in a river over aquatic plants. The saturated porous layer is bounded from below by a rigid plate and the pure fluid layer has a free, undefo… [Phys. Rev. E 94, 013104] Published Thu Jul 07, 2016
    Schlagwort(e): Fluid Dynamics
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  • 53
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Tomoshige Miyaguchi, Takuma Akimoto, and Eiji Yamamoto Recently, anomalous subdiffusion, aging, and scatter of the diffusion coefficient have been reported in many single-particle-tracking experiments, though the origins of these behaviors are still elusive. Here, as a model to describe such phenomena, we investigate a Langevin equation with diffusivity… [Phys. Rev. E 94, 012109] Published Fri Jul 08, 2016
    Schlagwort(e): Statistical Physics
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  • 54
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): Rohith V. Swaminathan, S. Ravichandran, Prasad Perlekar, and Rama Govindarajan The merger of two like-signed vortices is a well-studied problem, but in a turbulent flow, we may often have more than two like-signed vortices interacting. We study the merger of three or more identical corotating vortices initially arranged on the vertices of a regular polygon. At low to moderate … [Phys. Rev. E 94, 013105] Published Thu Jul 07, 2016
    Schlagwort(e): Fluid Dynamics
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  • 55
    Publikationsdatum: 2016-07-09
    Beschreibung: Author(s): E. Dieterich, J. Camunas-Soler, M. Ribezzi-Crivellari, U. Seifert, and F. Ritort Controlling a time-dependent force applied to single molecules or colloidal particles is crucial for many types of experiments. Since in optical tweezers the primary controlled variable is the position of the trap, imposing a target force requires an active feedback process. We analyze this feedback… [Phys. Rev. E 94, 012107] Published Thu Jul 07, 2016
    Schlagwort(e): Statistical Physics
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  • 56
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Gao-Feng Wei, Shi-Hai Dong, Xin-Wei Cao, and Yun-Liang Zhang Using an isospin- and momentum-dependent transport model, we examine the effects of an electric field induced by a variable magnetic field on the π − / π + ratio in central to peripheral heavy-ion collisions at beam energies of 400 and 1500 MeV/nucleon. It is shown that while the induced electric field … [Phys. Rev. C 94, 014605] Published Mon Jul 11, 2016
    Schlagwort(e): Nuclear Reactions
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  • 57
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Chengcheng Han and Myeonghun Park The physics beyond the Standard Model with parameters of the compressed spectrum is well motivated both in the theory side and with phenomenological reasons, especially related to dark matter phenomenology. In this letter, we propose a method to tag soft final state particles from a decaying process… [Phys. Rev. D 94, 011502(R)] Published Mon Jul 11, 2016
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  • 58
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Xian-Wei Kang, Zhi-Hui Guo, and J. A. Oller The nature of the bottomonium-like states Z b ( 10610 ) and Z b ( 10650 ) is studied by calculating the B ( * ) B ¯ * compositeness ( X ) in those resonances. We first consider uncoupled isovector S -wave scattering of B ( * ) B ¯ * within the framework of effective-range expansion (ERE). Expressions for the scattering le… [Phys. Rev. D 94, 014012] Published Mon Jul 11, 2016
    Schlagwort(e): Strong Interactions
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  • 59
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Xiao-Jun Bi, Ran Ding, Yizhou Fan, Li Huang, Chuang Li, Tianjun Li, Shabbar Raza, Xiao-Chuan Wang, and Bin Zhu Recently, an excess of events in diphoton channel with invariant mass of about 750 GeV has been reported by the ATLAS and CMS Collaborations. Considering it as a tantalizing hint for new physics beyond the Standard Model (SM), we propose a simple extension of the SM with an additional doublet Higgs … [Phys. Rev. D 94, 015012] Published Mon Jul 11, 2016
    Schlagwort(e): Beyond the Standard Model
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  • 60
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): J. M. Yao and J. Engel We present a generator-coordinate calculation, based on a relativistic energy-density functional, of the low-lying spectra in the isotopes Nd 150 and Sm 150 and of the nuclear matrix element that governs the neutrinoless double- β decay of the first isotope to the second. We carefully examine the impac… [Phys. Rev. C 94, 014306] Published Mon Jul 11, 2016
    Schlagwort(e): Nuclear Structure
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  • 61
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Yi-Lei Tang, Chen Zhang, and Shou-hua Zhu The possibility that the 125 GeV Higgs boson may decay into invisible non-standard-model (non-SM) particles is theoretically and phenomenologically intriguing. In this paper, we investigate the sensitivity of the Large Hadron Electron Collider (LHeC) to an invisibly decaying Higgs, in its proposed h… [Phys. Rev. D 94, 011702(R)] Published Mon Jul 11, 2016
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  • 62
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Sebastiano Bernuzzi, David Radice, Christian D. Ott, Luke F. Roberts, Philipp Mösta, and Filippo Galeazzi We present results from the first large parameter study of neutron star mergers using fully general relativistic simulations with finite-temperature microphysical equations of state and neutrino cooling. We consider equal and unequal-mass binaries drawn from the galactic population and simulate each… [Phys. Rev. D 94, 024023] Published Mon Jul 11, 2016
    Schlagwort(e): General Relativity and Gravitation
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  • 63
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Thomas DeGrand, Maarten Golterman, Ethan T. Neil, and Yigal Shamir We develop chiral perturbation theory for chirally broken theories with fermions in two different representations of the gauge group. Any such theory has a nonanomalous singlet U ( 1 ) A symmetry, yielding an additional Nambu-Goldstone boson when spontaneously broken. We calculate the next-to-leading or… [Phys. Rev. D 94, 025020] Published Mon Jul 11, 2016
    Schlagwort(e): Field Theory, Formal Particle Theory
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  • 64
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Leonardo Modesto, Marco Piva, and Lesław Rachwał We explicitly compute the one-loop exact beta function for a nonlocal extension of the standard gauge theory, in particular, Yang-Mills and QED. The theory, made of a weakly nonlocal kinetic term and a local potential of the gauge field, is unitary (ghost-free) and perturbatively super-renormalizabl… [Phys. Rev. D 94, 025021] Published Mon Jul 11, 2016
    Schlagwort(e): Field Theory, Formal Particle Theory
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  • 65
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): M. E. Carrington, B. A. Meggison, and D. Pickering It is well known that perturbative pressure calculations show poor convergence. Calculations using a two-particle irreducible (2PI) effective action show improved convergence at the 3 loop level, but no calculations have been done at 4 loops. We consider the 2PI effective theory for a symmetric scal… [Phys. Rev. D 94, 025018] Published Mon Jul 11, 2016
    Schlagwort(e): Field Theory, Formal Particle Theory
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  • 66
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): M. I. Vysotsky and E. V. Zhemchugov [Phys. Rev. D 94, 019901] Published Fri Jul 08, 2016
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  • 67
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Spase Petkoski, Andreas Spiegler, Timothée Proix, Parham Aram, Jean-Jacques Temprado, and Viktor K. Jirsa Network couplings of oscillatory large-scale systems, such as the brain, have a space-time structure composed of connection strengths and signal transmission delays. We provide a theoretical framework, which allows treating the spatial distribution of time delays with regard to synchronization, by d… [Phys. Rev. E 94, 012209] Published Mon Jul 11, 2016
    Schlagwort(e): Nonlinear Dynamics and Chaos
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  • 68
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Dan Wilson and Jeff Moehlis Isostables and isostable reduction, analogous to isochrons and phase reduction for oscillatory systems, are useful in the study of nonlinear equations which asymptotically approach a stationary solution. In this work, we present a general method for isostable reduction of partial differential equati… [Phys. Rev. E 94, 012211] Published Mon Jul 11, 2016
    Schlagwort(e): Nonlinear Dynamics and Chaos
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  • 69
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Salomon Mugisha and Hai-Jun Zhou For a network formed by nodes and undirected links between pairs of nodes, the network optimal attack problem aims at deleting a minimum number of target nodes to break the network down into many small components. This problem is intrinsically related to the feedback vertex set problem that was succ… [Phys. Rev. E 94, 012305] Published Mon Jul 11, 2016
    Schlagwort(e): Networks and Complex Systems
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  • 70
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Vishal V. R. Nandigana and N. R. Aluru In this article, we perform a computational investigation of a nanopore connected to external fluidic reservoirs of asymmetric geometries. The asymmetry between the reservoirs is achieved by changing the cross-sectional areas, and the reservoirs are designated as the micropore reservoir and macropor… [Phys. Rev. E 94, 012402] Published Mon Jul 11, 2016
    Schlagwort(e): Biological Physics
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  • 71
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Franck J. Vernerey and Umut Akalp We propose a mechanism of adherent cell mechanosensing, based on the idea that the contractile actomyosin machinery behaves as a catch bond. For this, we construct a simplified model of the actomyosin structure that constitutes the building block of stress fibers and express the stability of cross b… [Phys. Rev. E 94, 012403] Published Mon Jul 11, 2016
    Schlagwort(e): Biological Physics
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  • 72
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): L. E. Perotti, S. Dharmavaram, W. S. Klug, J. Marian, J. Rudnick, and R. F. Bruinsma This paper presents a theoretical description of the shape of capsids for archaeal viruses, in particular the ATV virus which can develop a unique two-tail structure. The capsid takes the shape of a constant curvature surface, an unduloid, which contains scarlike defects. These defects may serve as a source of excess protein concentration, which can further enable to observed tail growth. [Phys. Rev. E 94, 012404] Published Mon Jul 11, 2016
    Schlagwort(e): Biological Physics
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  • 73
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Erick Sarmiento-Gómez, José Ramón Villanueva-Valencia, Salvador Herrera-Velarde, José Arturo Ruiz-Santoyo, Jesús Santana-Solano, José Luis Arauz-Lara, and Ramón Castañeda-Priego We report on the short-time dynamics in colloidal mixtures made up of monomers and dimers highly confined between two glass plates. At low concentrations, the experimental measurements of colloidal motion agree well with the solution of the Navier-Stokes equation at low Reynolds numbers; the latter … [Phys. Rev. E 94, 012608] Published Mon Jul 11, 2016
    Schlagwort(e): Colloids, Complex Fluids, and Active Matter
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  • 74
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Maria E. Stournara, Ravi Kumar, Yue Qi, and Brian W. Sheldon The study of chemical segregation at interfaces, and in particular the ability to predict the thickness of segregated layers via analytical expressions or computational modeling, is a fundamentally challenging topic in the design of novel heterostructured materials. This issue is particularly releva… [Phys. Rev. E 94, 012802] Published Mon Jul 11, 2016
    Schlagwort(e): Films and Interfaces
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  • 75
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Li-Tsung Sheng, Wei-Ching Chang, and Shu-San Hsiau A core is formed at the center of a quasi-two-dimensional rotating drum filled more than half with granular material. The core rotates slightly faster than the drum (precession) and decreases in radius over time (erosion) due to the granular creeping motion that occurs below the freely flowing layer… [Phys. Rev. E 94, 012903] Published Mon Jul 11, 2016
    Schlagwort(e): Granular Materials
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  • 76
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Kyuichi Yasui, Toru Tuziuti, and Wataru Kanematsu Numerical simulations of the dissolution of an air nanobubble in water have been performed taking into account the effect of bubble dynamics (inertia of the surrounding liquid). The presence of stable bulk nanobubbles is not assumed in the present study because the bubble radius inevitably passes th… [Phys. Rev. E 94, 013106] Published Mon Jul 11, 2016
    Schlagwort(e): Fluid Dynamics
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  • 77
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): L. A. Pickworth, B. A. Hammel, V. A. Smalyuk, A. G. MacPhee, H. A. Scott, H. F. Robey, O. L. Landen, M. A. Barrios, S. P. Regan, M. B. Schneider, M. Hoppe, Jr., T. Kohut, D. Holunga, C. Walters, B. Haid, and M. Dayton First measurements of hydrodynamic growth near peak implosion velocity in an inertial confinement fusion (ICF) implosion at the National Ignition Facility were obtained using a self-radiographing technique and a preimposed Legendre mode 40, λ = 140     μ m , sinusoidal perturbation. These are the first mea… [Phys. Rev. Lett. 117, 035001] Published Mon Jul 11, 2016
    Schlagwort(e): Plasma and Beam Physics
    Print ISSN: 0031-9007
    Digitale ISSN: 1079-7114
    Thema: Physik
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  • 78
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): Petri Hirvonen, Mikko M. Ervasti, Zheyong Fan, Morteza Jalalvand, Matthew Seymour, S. Mehdi Vaez Allaei, Nikolas Provatas, Ari Harju, Ken R. Elder, and Tapio Ala-Nissila We extend the phase field crystal (PFC) framework to quantitative modeling of polycrystalline graphene. PFC modeling is a powerful multiscale method for finding the ground state configurations of large realistic samples that can be further used to study their mechanical, thermal, or electronic prope… [Phys. Rev. B 94, 035414] Published Mon Jul 11, 2016
    Schlagwort(e): Surface physics, nanoscale physics, low-dimensional systems
    Print ISSN: 1098-0121
    Digitale ISSN: 1095-3795
    Thema: Physik
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  • 79
    facet.materialart.
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    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): F. J. García de Abajo, B. Barwick, and F. Carbone The properties of an electron beam can be manipulated by electromagnetic fields in vacuum via the ponderomotive force. Such an interaction is also at the core of the Kapitza-Dirac effect, which describes the diffraction of electrons by an optical standing wave. Here, the authors predict a new type of interaction between electrons and the electromagnetic field, opening up new possibilities for the manipulation of electron beams. If surface plasmon polaritons are tailored to interfere forming a periodic field pattern, it becomes possible to diffract electrons from such near field. With the proper manipulation of the plasmonic fields, orbital angular momentum can be imparted to the electrons, and even the phase of their wave functions can be manipulated. An additional degree of freedom is provided by the possibility to tailor the spatial properties of the light and the materials supporting the surface plasmons. This arbitrary control can be extended to different substrates such as graphene or layered systems and may open up a viable route to create tunable phase plates for electron microscopes. [Phys. Rev. B 94, 041404(R)] Published Mon Jul 11, 2016
    Schlagwort(e): Surface physics, nanoscale physics, low-dimensional systems
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  • 80
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): S. Fedortchenko, S. Huppert, A. Vasanelli, Y. Todorov, C. Sirtori, C. Ciuti, A. Keller, T. Coudreau, and P. Milman We investigate the output generation of squeezed radiation of a cavity photon mode coupled to another off-resonant bosonic excitation. By modulating in time their linear interaction, we predict a high degree of output squeezing when the dispersive ultra-strong-coupling regime is achieved, i.e., when… [Phys. Rev. A 94, 013821] Published Mon Jul 11, 2016
    Schlagwort(e): Quantum optics, physics of lasers, nonlinear optics, classical optics
    Print ISSN: 1050-2947
    Digitale ISSN: 1094-1622
    Thema: Physik
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  • 81
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    Unbekannt
    American Physical Society (APS)
    Publikationsdatum: 2016-07-12
    Beschreibung: Author(s): N. S. Voronova, A. A. Elistratov, and Yu. E. Lozovik Exciton-photon beats known as polariton Rabi oscillations in semiconductor microcavities are usually excited by short pulses of light. We consider a different pumping scheme, assuming a cw pumping of the Rabi oscillator from an exciton reservoir. We account for the initial pulse of light setting the… [Phys. Rev. B 94, 045413] Published Mon Jul 11, 2016
    Schlagwort(e): Surface physics, nanoscale physics, low-dimensional systems
    Print ISSN: 1098-0121
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    Thema: Physik
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  • 82
    Publikationsdatum: 2016-07-13
    Beschreibung: Although phosphorus limitation is common in freshwaters and bacteria are known to use dissolved organic phosphorus (DOP), little is known about how efficiently DOP compounds are taken up by individual bacterial taxa. Here, we assessed bacterial uptake of three model DOP substrates in two mountain lakes and examined whether DOP uptake followed concentration-dependent patterns. We determined bulk uptake rates by the bacterioplankton and examined bacterial taxon-specific substrate uptake patterns using microautoradiography combined with catalyzed reporter deposition–fluorescence in situ hybridization. Our results show that in the oligotrophic alpine lake, bacteria took up ATP, glucose-6-phosphate and glycerol-3-phosphate to similar extents (mean 29.7 ± 4.3% Bacteria ), whereas in the subalpine mesotrophic lake, ca. 40% of bacteria took up glucose-6-phosphate, but only ~20% took up ATP or glycerol-3-phosphate. In both lakes, the R-BT cluster of Betaproteobacteria (lineage of genus Limnohabitans ) was over-represented in glucose-6-phosphate and glycerol-3-phosphate uptake, whereas AcI Actinobacteria were under-represented in the uptake of those substrates. Alphaproteobacteria and Bacteroidetes contributed to DOP uptake proportionally to their in situ abundance. Our results demonstrate that R-BT Betaproteobacteria are the most active bacteria in DOP acquisition, whereas the abundant AcI Actinobacteria may either lack high affinity DOP uptake systems or have reduced phosphorus requirements.
    Print ISSN: 0168-6496
    Digitale ISSN: 1574-6941
    Thema: Biologie
    Publiziert von Oxford University Press
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  • 83
    Publikationsdatum: 2016-07-13
    Beschreibung: Earlier studies show that the proliferation of phytoplankton viruses can be inhibited by depletion of soluble reactive phosphorus (SRP; orthophosphate). In natural marine waters, phytoplankton phosphorus (P) availability is, however, largely determined by the supply rate of SRP (e.g. through remineralization) and potentially by the source of P as well (i.e. the utilization of soluble non-reactive P; SNP). Here we show how a steady low supply of P (mimicking natural P recycling) to virally infected P-limited Micromonas pusilla stimulates virus proliferation. Independent of the degree of P limitation prior to infection (0.32 and 0.97μ max chemostat cultures), SRP supply resulted in 2-fold higher viral burst sizes (viruses lysed per host cell) as compared with no addition (P starvation). Delaying these spikes during the infection cycle showed that the added SRP was utilized for extra M. pusilla virus (MpV) production far into the lytic cycle (18 h post-infection). Moreover, P-limited M. pusilla utilized several SNP compounds with high efficiency and with the same extent of burst size stimulation as for SRP. Finally, addition of virus-free MpV lysate (representing a complex SNP mixture) to newly infected cells enhanced MpV production, implicating host-associated alkaline phosphatase activity, and highlighting its important role in oligotrophic environments.
    Print ISSN: 0168-6496
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    Thema: Biologie
    Publiziert von Oxford University Press
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  • 84
    Publikationsdatum: 2016-07-13
    Beschreibung: Earth's free oscillations excited by a mega-thrust earthquake were observed by a continent-scale array of groundwater monitoring sites for the first time. After the occurrence of the 2011 Tohoku M w 9.0 earthquake, water level records at 43 out of 216 wells in the China mainland revealed long-period free oscillation signals. In the time domain, these free oscillations exhibit globe circling Rayleigh surface waves. In some single wells, even the globe-circling Rayleigh wave R7 was visible, which travels three times around the Earth after the first arrival and appears about 10 hr after the earthquake occurrence in the present case. The spectral analysis shows that the principal oscillatory fluctuations seen in the water level records correspond to the spheroidal modes 0 S l ( l  = 2–31 for frequencies between 0.3 and 5.0 mHz) of the Earth's free oscillation. Especially at quiet sites, the spheroidal modes at very low frequencies (〈1.5 mHz) can be identified with high signal-to-noise ratios. Using signal enhancement methods (product spectrum over 43 wells), even the gravest modes of these oscillations can be detected. The results suggest that groundwater level arrays can be considered as a low-cost complementary tool to study the Earth's free oscillations excited by great earthquakes. Additionally, the site-specific aquifer response may provide further insight into local hydrogeological conditions.
    Schlagwort(e): Seismology
    Print ISSN: 0956-540X
    Digitale ISSN: 1365-246X
    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 85
    Publikationsdatum: 2016-07-13
    Beschreibung: We performed numerical simulations of the 2011 deep-seated Akatani landslide in central Japan to understand the dynamic evolution of friction of the landslide. By comparing the forces obtained from numerical simulation to those resolved from seismic waveform inversion, the coefficient of the friction during sliding was investigated in the range of 0.1–0.4. The simulation assuming standard Coulomb friction shows that the forces obtained by the seismic waveform inversion are well explained using a constant friction of μ = 0.3. A small difference between the residuals of Coulomb simulation and a velocity-dependent simulation suggests that the coefficient of friction over the volume is well constrained as 0.3 most of time during sliding. It suggests the sudden loss of shearing resistance at the onset of sliding, that is, sudden drop of the initial coefficient of friction in our model, which accelerates the deep-seated landslide. Our numerical simulation calibrated by seismic data provides the evolution of dynamic friction with a reasonable resolution in time, which is difficult to obtain from a conventional runout simulation, or seismic waveform inversion alone.
    Schlagwort(e): Seismology
    Print ISSN: 0956-540X
    Digitale ISSN: 1365-246X
    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 86
    Publikationsdatum: 2016-07-13
    Beschreibung: We explore thermal convection of a fluid with a temperature-dependent viscosity in a basally heated 3-D spherical shell using linear stability analyses and numerical experiments, while considering the application of our results to terrestrial planets. The inner to outer radius ratio of the shell f assumed in the linear stability analyses is in the range of 0.11–0.88. The critical Rayleigh number R c for the onset of thermal convection decreases by two orders of magnitude as f increases from 0.11 to 0.88, when the viscosity depends sensitively on the temperature, as is the case for real mantle materials. Numerical simulations carried out in the range of f  = 0.11–0.55 show that a thermal boundary layer (TBL) develops both along the surface and bottom boundaries to induce cold and hot plumes, respectively, when f is 0.33 or larger. However, for smaller f values, a TBL develops only on the bottom boundary. Convection occurs in the stagnant-lid regime where the root mean square velocity on the surface boundary is less than 1 per cent of its maximum at depth, when the ratio of the viscosity at the surface boundary to that at the bottom boundary exceeds a threshold that depends on f . The threshold decreases from 10 6.5 at f  = 0.11 to 10 4 at f  = 0.55. If the viscosity at the base of the convecting mantle is 10 20 –10 21  Pa s, the Rayleigh number exceeds R c for Mars, Venus and the Earth, but does not for the Moon and Mercury; convection is unlikely to occur in the latter planets unless the mantle viscosity is much lower than 10 20  Pa s and/or the mantle contains a strong internal heat source.
    Schlagwort(e): Geodynamics and Tectonics
    Print ISSN: 0956-540X
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    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 87
    Publikationsdatum: 2016-07-13
    Beschreibung: We introduce a technique to compute exact anelastic sensitivity kernels in the time domain using parsimonious disk storage. The method is based on a reordering of the time loop of time-domain forward/adjoint wave propagation solvers combined with the use of a memory buffer. It avoids instabilities that occur when time-reversing dissipative wave propagation simulations. The total number of required time steps is unchanged compared to usual acoustic or elastic approaches. The cost is reduced by a factor of 4/3 compared to the case in which anelasticity is partially accounted for by accommodating the effects of physical dispersion. We validate our technique by performing a test in which we compare the K α sensitivity kernel to the exact kernel obtained by saving the entire forward calculation. This benchmark confirms that our approach is also exact. We illustrate the importance of including full attenuation in the calculation of sensitivity kernels by showing significant differences with physical-dispersion-only kernels.
    Schlagwort(e): Seismology
    Print ISSN: 0956-540X
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    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 88
    Publikationsdatum: 2016-07-13
    Beschreibung: Subducting oceanic lithosphere is an example of a thin sheet-like object whose characteristic lateral dimension greatly exceeds its thickness. Here we exploit this property to derive a new hybrid boundary-integral/thin sheet (BITS) representation of subduction that combines in a single equation all the forces acting on the sheet: gravity, internal resistance to bending and stretching, and the tractions exerted by the ambient mantle. For simplicity, we limit ourselves to 2-D. We solve the BITS equations using a discrete Lagrangian approach in which the sheet is represented by a set of vertices connected by edges. Instantaneous solutions for the sinking speed of a slab attached to a trailing flat sheet obey a scaling law of the form V / V Stokes  = fct(St), where V Stokes is a characteristic Stokes sinking speed and St is the sheet's flexural stiffness. Time-dependent solutions for the evolution of the sheet's shape and thickness show that these are controlled by the viscosity ratio between the sheet and its surroundings. An important advantage of the BITS approach is the possibility of generalizing the sheet's rheology, either to a viscosity that varies along the sheet or to a non-Newtonian shear-thinning rheology.
    Schlagwort(e): Geodynamics and Tectonics
    Print ISSN: 0956-540X
    Digitale ISSN: 1365-246X
    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 89
    Publikationsdatum: 2016-07-13
    Beschreibung: Rock permeability is an important parameter for the formation evaluation. In this paper, a new method with streaming current is proposed to determine the sample permeability based on the electrokinetic effects, and is proved by the experimental measurements. Corresponding to this method, we have designed an experimental setup and a test system, then performed the streaming current (potential) and electro-osmosis pressure experiments with 23 sandstone samples at 0.05 mol l –1 NaCl solution. The streaming current (potential) coefficient and electro-osmosis pressure coefficient are obtained, respectively, with the experimental data at low frequencies with AC lock-in technique. The electrokinetic permeabilities are further calculated with these coefficients. The results are consistent well with the gas permeability measured with Darcy's law, which verifies the current method for estimating rock permeability. Our measurements are also analysed and compared with previous measurements. The results indicate that our method can reflect the essence of electrokinetic effects better and simplify the electrokinetic measurements as well. In addition, we discuss the influences of experimental artefacts (core holder and confining pressure installation) on the electrokinetic data. The results show that the trough phenomenon, appeared in frequency curves of streaming current (potential) coefficients, is induced by the resonance of the core-holder/vibrator system. This is important for the design of electrokinetic setup and the analysis of low-frequency response of the electrokinetic coupling coefficients.
    Schlagwort(e): Marine Geosciences and Applied Geophysics
    Print ISSN: 0956-540X
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    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 90
    Publikationsdatum: 2016-07-13
    Beschreibung: Real Earth media are not perfectly elastic. Instead, they attenuate propagating mechanical waves. This anelastic phenomenon in wave propagation can be modeled by a viscoelastic mechanical model consisting of several standard linear solids. Using this viscoelastic model, we approximate a constant Q over a frequency band of interest. We use a four-element viscoelastic model with a trade-off between accuracy and computational costs to incorporate Q into 2-D time-domain first-order velocity–stress wave equations. To improve the computational efficiency, we limit the Q in the model to a list of discrete values between 2 and 1000. The related stress and strain relaxation times that characterize the viscoelastic model are pre-calculated and stored in a database for use by the finite-difference calculation. A viscoelastic finite-difference scheme that is second order in time and fourth order in space is developed based on the MacCormack algorithm. The new method is validated by comparing the numerical result with analytical solutions that are calculated using the generalized reflection/transmission coefficient method. The synthetic seismograms exhibit greater than 95 per cent consistency in a two-layer viscoelastic model. The dispersion generated from the simulation is consistent with the Kolsky–Futterman dispersion relationship.
    Schlagwort(e): Seismology
    Print ISSN: 0956-540X
    Digitale ISSN: 1365-246X
    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 91
    Publikationsdatum: 2016-07-13
    Beschreibung: Seismology plays an important role in characterizing potential underground nuclear tests. Using broad-band digital seismic data from Northeast China, South Korea and Japan, we investigated the properties of the recent seismic event occurred in North Korea on 2016 January 6. Using a relative location method and choosing the previous 2006 explosion as the master event, the 2016 event was located within the North Korean nuclear test site, with its epicentre at latitude 41.3003°N and longitude 129.0678°E, approximately 900 m north and 500 m west of the previous event on 2013 February 12. Based on the error ellipse, the relocation uncertainty was approximately 70 m. Using the P / S spectral ratios, including Pg/Lg, Pn/Lg and Pn/Sn, as the discriminants, we identify the 2016 event as an explosion rather than an earthquake. The body-wave magnitude calculated from regional wave Lg is m b (Lg) equal to 4.7 ± 0.2. Adopting an empirical magnitude–yield relation, and assuming that the explosion is fully coupled and detonated at a normally scaled depth, we find that the seismic yield is about 4 kt, with the uncertainties allowing a range from 2 to 8 kt.
    Schlagwort(e): Express Letters, Seismology
    Print ISSN: 0956-540X
    Digitale ISSN: 1365-246X
    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
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  • 92
    Publikationsdatum: 2016-07-13
    Beschreibung: After 83 yr, the great normal-faulting earthquake of 1933 March 2, which took place off the Japan Trench and produced a devastating tsunami on the Sanriku coast and damaging waves in Hawaii, remains the largest recorded normal-faulting earthquake. This study uses advanced methods to investigate this event using far-field seismological and tsunami data and complements a sister study by Uchida et al. which used exclusively arrival times at Japanese stations. Our relocation of the main shock (39.22°N, 144.45°E, with a poorly constrained depth of less than 40 km) places it in the outer trench slope, below a seafloor depth of ~6500 m, in a region of horst-and-graben structure, with fault scarps approximately parallel to the axis of the Japan Trench. Relocated aftershocks show a band of genuine shallow aftershocks parallel to the Japan Trench under the outer trench slope and a region of post-mainshock events landward of the trench axis that occur over roughly the same latitude range and are thought to be the result of stress transfer to the interplate thrust boundary following the normal-faulting rupture. Based on a combination of P -wave first motions and inversion of surface wave spectral amplitudes, we propose a normal-faulting focal mechanism ( = 200°, = 61° and = 271°) and a seismic moment M 0 = (7 ± 1) x 10 28 dyn cm ( M w = 8.5). A wide variety of data, including the distribution of isoseismals, the large magnitudes (up to 8.9) proposed by early investigators before the standardization of magnitude scales, estimates of energy-to-moment ratios and the tentative identification of a T wave at Pasadena (and possibly Riverside), clearly indicate that this seismic source was exceptionally rich in high-frequency wave energy, suggesting a large apparent stress and a sharp rise time, and consistent with the behaviour of many smaller shallow normal-faulting earthquakes. Hydrodynamic simulations based on a range of possible sources consistent with the above findings, including a compound rupture on two opposite-facing normal-faulting segments, are in satisfactory agreement with tsunami observations in Hawaii, where run-up reached 3 m, causing significant damage. This study emphasizes the need to include off-trench normal-faulting earthquake sources in global assessments of tsunami hazards emanating from the subduction of old and cold plates, whose total length of trenches exceed 20 000 km, even though only a handful of great such events are known with confidence in the instrumental record.
    Schlagwort(e): Seismology
    Print ISSN: 0956-540X
    Digitale ISSN: 1365-246X
    Thema: Geologie und Paläontologie
    Publiziert von Oxford University Press im Namen von The Deutsche Geophysikalische Gesellschaft (DGG) and the Royal Astronomical Society (RAS).
    Standort Signatur Erwartet Verfügbarkeit
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  • 93
    facet.materialart.
    Unbekannt
    Oxford University Press
    Publikationsdatum: 2016-07-13
    Beschreibung: Pointwise error estimates for the first-order div least-squares (LS) finite element method for second-order elliptic partial differential equations are presented. Direct flux approximation is considered as an important advantage of the LS method. However, there are no known pointwise error estimates for the direct flux approximation. In this paper, we provide optimal pointwise estimates which show local dependence of the error at a point and weak dependence of the global norm. As an elementary consequence of these estimates, we provide an asymptotic error expansion inequality. The inequality has applications to superconvergence and a posteriori estimates.
    Print ISSN: 0272-4979
    Digitale ISSN: 1464-3642
    Thema: Mathematik
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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  • 94
    Publikationsdatum: 2016-07-13
    Beschreibung: The first-order and higher-order derivatives of a function can be viewed as the solutions of Volterra integral equations of the first kind. In this paper we propose a fast multiscale solver for the numerical solution of the Tikhonov regularization of the Volterra equations. In association with the special form of the kernels, the matrices resulting from the discretization by multiscale bases are sparse. Moreover, they can be truncated using proper strategies with only a minor loss of accuracy. In the best case, the number of nonzero entries of the truncated matrices is linear with respect to the dimensions of the matrices. The accuracy of the solution from the solver is analysed theoretically and verified by numerical experiments.
    Print ISSN: 0272-4979
    Digitale ISSN: 1464-3642
    Thema: Mathematik
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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  • 95
    Publikationsdatum: 2016-07-13
    Beschreibung: The finite element method with $\mathscr {Q}_p$ elements is applied to a singularly perturbed convection–diffusion problem on an L-shaped domain. As an effect of corner singularities the exact solution is not $H^2$ -regular. Therefore, we combine a layer-adapted Shishkin mesh with a special grading adapted to the corner singularity. On such meshes we prove error estimates and estimates for the closeness error which explicitly show the influence of the grading parameter $\mu$ . Hence, $\mu$ can be chosen such that optimal error bounds are obtained. Thereby, it turns out that in the problem studied the influence of the corner singularity becomes small if the perturbation parameter $\varepsilon$ decreases. Moreover, we conduct numerical experiments that verify the theoretical results.
    Print ISSN: 0272-4979
    Digitale ISSN: 1464-3642
    Thema: Mathematik
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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  • 96
    facet.materialart.
    Unbekannt
    Oxford University Press
    Publikationsdatum: 2016-07-13
    Beschreibung: Pták's method of nondiscrete induction is based on the idea that in the analysis of iterative processes one should aim at rates of convergence as functions rather than just numbers, because functions may give convergence estimates that are tight throughout the iteration rather than just asymptotically. In this paper we motivate and prove a theorem on nondiscrete induction, originally due to Potra and Pták, and we apply it to the Newton iterations for computing the matrix polar decomposition and the matrix square root. Our goal is to illustrate the application of the method of nondiscrete induction in the finite-dimensional numerical linear algebra context. We show the sharpness of the resulting convergence estimate analytically for the polar decomposition iteration and on some examples for the square root iteration. We also discuss some of the method's limitations and possible extensions.
    Print ISSN: 0272-4979
    Digitale ISSN: 1464-3642
    Thema: Mathematik
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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  • 97
    Publikationsdatum: 2016-07-13
    Beschreibung: We consider the numerical solution, by a Petrov–Galerkin finite-element method, of a singularly perturbed reaction–diffusion differential equation posed on the unit square. In Lin & Stynes (2012, A balanced finite element method for singularly perturbed reaction-diffusion problems. SIAM J. Numer. Anal. , 50 , 2729–2743), it is argued that the natural energy norm, associated with a standard Galerkin approach, is not an appropriate setting for analysing such problems, and there they propose a method for which the natural norm is ‘balanced’. In the style of a first-order system least squares method, we extend the approach of Lin & Stynes (2012, A balanced finite element method for singularly perturbed reaction-diffusion problems. SIAM J. Numer. Anal. , 50 , 2729–2743) by introducing a constraint which simplifies the associated finite-element space and the method's analysis. We prove robust convergence in a balanced norm on a piecewise-uniform (Shishkin) mesh, and present supporting numerical results. Finally, we demonstrate how the resulting linear systems are solved optimally using multigrid methods.
    Print ISSN: 0272-4979
    Digitale ISSN: 1464-3642
    Thema: Mathematik
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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  • 98
    Publikationsdatum: 2016-07-13
    Beschreibung: The construction of tensor-product surface patches with a family of Pythagorean-hodograph (PH) isoparametric curves is investigated. The simplest nontrivial instances, interpolating four prescribed patch boundary curves, involve degree $(5,4)$ tensor-product surface patches $\bf{x}(u,v)$ whose $v=\hbox {constant}$ isoparametric curves are all spatial PH quintics. It is shown that the construction can be reduced to solving a novel type of quadratic quaternion equation, in which the quaternion unknown and its conjugate exhibit left and right coefficients, while the quadratic term has a coefficient interposed between them. A closed-form solution for this type of equation is derived, and conditions for the existence of solutions are identified. The surfaces incorporate three residual scalar freedoms which can be exploited to improve the interior shape of the patch. The implementation of the method is illustrated through a selection of computed examples.
    Print ISSN: 0272-4979
    Digitale ISSN: 1464-3642
    Thema: Mathematik
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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  • 99
    Publikationsdatum: 2016-07-13
    Beschreibung: Interior eigenvalues of bounded scattering objects can be rigorously characterized from multi-static and multi-frequency far field data, that is, from the behaviour of scattered waves far away from the object. This characterization, the so-called inside–outside duality, holds for various types of penetrable and impenetrable scatterers and is based on the behaviour of a particular eigenvalue of the far field operator. It naturally leads to a numerical algorithm for computing interior eigenvalues of a scatterer that does not require shape or physical properties of the scatterer as input. Since the nonlinear inverse problem to compute such interior eigenvalues from far field data is ill-posed, we propose a regularizing algorithm that is shown to converge as the noise level of the far field data tends to zero. We illustrate feasibility and accuracy of our algorithm by numerical experiments where we compute interior transmission eigenvalues and Robin eigenvalues of the Laplacian in three-dimensional domains from scattering data of these domains due to plane incident waves.
    Print ISSN: 0272-4979
    Digitale ISSN: 1464-3642
    Thema: Mathematik
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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  • 100
    Publikationsdatum: 2016-07-13
    Beschreibung: During the last centuries, populations of marine megafauna—such as seabirds, turtles, and mammals—were intensively exploited. At present, other threats such as bycatch and pollution affect these species, which play key ecological roles in marine ecosystems as apex consumers and/or nutrient transporters. This study analyses the distribution of six megafaunal species ( Chelonia mydas , Caretta caretta , Dermochelys coriacea , Thalassarche melanophris , Otaria flavescens , and Arctocephalus australis ) coexisting in the Southwestern Atlantic to discuss their protection in terms of current management strategies in the region. Through the prediction of the species potential distributions and their relation to bathymetry, sea temperature and oceanographic fronts, key ecological areas are defined from a multi-taxa perspective. Information on the distribution of 70 individuals (18 sea turtles, 19 albatrosses, and 33 otariids) was obtained through satellite tracking conducted during 2007–2013 and analysed using a Geographic Information System and maximum entropy models. During the autumn–winter period, megafaunal species were distributed over the continental shelves of Argentina, Uruguay, and Brazil, mainly over the Argentine Exclusive Economic Zone and the Argentina-Uruguay Common Fishing Zone. Despite some differences, all megafaunal species seems to have similar environmental requirements during the autumn–winter period. Mostly waters shallower than 50 m were identified as key ecological areas, with the Río de la Plata as the habitat with the highest suitability for all the species. This area is highly productive and sustains the main coastal fisheries of Uruguay and Argentina, yet its role as a key ecological area for megafaunal species has been underestimated until now. This approach provides a basis to analyse the effect of anthropic activities on megafaunal species through risk maps and, ultimately, to generate knowledge to improve national and bi-national management plans between Argentina and Uruguay.
    Print ISSN: 1054-3139
    Digitale ISSN: 1095-9289
    Thema: Biologie , Geologie und Paläontologie , Physik
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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