ALBERT

Description: Silicon is one of the most important elements in the current age of the anthropocene. It has numerous industrial applications, and supports a high-tech multi-billion Euro industry. Silicon has a fascinating biological and geological cycle, interacting with other globally important biogeochemical cycles. In this review, we bring together both biological and geological aspects of the silicon cycle to provide a general, comprehensive review of the cycling of silicon in the environment. We hope this review will provide inspiration for researchers to study this fascinating element, as well as providing a background environmental context to those interested in silicon.

Description: Dissolved and particulate metals (Ag, Cd, Co, Cu, Ni, and Zn) and nutrients (PO4, NO3, and H4SiO4) were measured in Todos Santos Bay (TSB) in August 2005. Two sources producing local gradients were identified: one from a dredge discharge area (DDA) and another south of the port and a creek. The average concentrations of dissolved Cd and Zn (1.3 and 15.6 nM, respectively) were higher by one order of magnitude than the surrounding Pacific waters, even during upwelling, and it is attributed to the presence of a widespread and long-lasting red tide coupled with some degree of local pollution. A clear spatial gradient (10 to 6 pM), from coast to offshore, of dissolved Ag was evident, indicating the influence of anthropogenic inputs. The particulate fraction of all metals, except Cu, showed a factor of ~3 decrease in concentrations from the DDA to the interior of the bay. The metal distributions were related to the bay’s circulation by means of a numerical model that shows a basically surface-wind-driven offshore current with subsurface compensation currents toward the coast. Additionally, the model shows strong vertical currents over the DDA. Principal component analysis revealed three possible processes that could be influencing the metal concentrations within TSB: anthropogenic inputs (Cd, Ag, and Co), biological proceses (NO3, Zn, and Cu), and upwelling and mixing (PO4, H4SiO4, Cd, and Ni). The most striking finding of this study was the extremely high Cd concentrations, which have been only reported in highly contaminated areas. As there was a strong red tide, it is hypothesized that the dinoflagellates are assimilating the Cd, which is rapidly remineralized and being concentrated on the stratified surface layers.

Description: The complement system has long been known to be a major element of innate immunity. Traditionally, it was regarded as the first line of defense against invading pathogens, leading to opsonization and phagocytosis or the direct lysis of microbes. However, from the second half of the twentieth century on, it became clear that complement is also intimately involved in the induction and “fine tuning” of adaptive B- and T-cell responses as well as lineage commitment. This growing recognition of the complement system’s multifunctional role in immunity is consistent with the recent paradigm that complement is also necessary for the successful contraction of an adaptive immune response. This review aims at giving a condensed overview of complement’s rise from a simple innate stop-and-go system to an essential and efficient participant in general immune homeostasis and acquired immunity.

Description: Jamaica Bay, NY, is a highly urbanized estuary within the boroughs of New York City conspicuously lacking published information on dissolved trace metal concentrations. The current study examines the distribution and cycling of trace metals in that embayment with data gathered during cruises in November 2004, April 2005, and June 2006. Most of the metal distributions (Fe, Zn, Co, Ag, Cu, Pb, Ni) in the water column are explained by the input of substantial volumes of treated wastewater effluent. However, several lines of evidence suggest that submarine groundwater discharge (SGD) is also an important source of dissolved Fe, Zn, Co, Ni, and isotopically distinct stable Pb ratios (206Pb, 207Pb, 208Pb) in the Bay. Conversely, the recirculated seawater component of SGD is an apparent sink for dissolved Mo. This study provides the first measurements of dissolved trace metals in the Jamaica Bay water column and subterranean estuary and provides evidence for trace metal input due to SGD.

Description: The Gakkel Ridge in the Arctic Ocean with its adjacent Nansen and Amundsen Basins is a key region for the study of mantle melting and crustal generation at ultraslow spreading rates. We use free-air gravity anomalies in combination with seismic reflection and wide-angle data to compute 2-D crustal models for the Nansen and Amundsen Basins in the Arctic Ocean. Despite the permanent pack-ice cover two geophysical transects cross both entire basins. This means that the complete basin geometry of the world’s slowest spreading system can be analysed in detail for the first time. Applying standard densities for the sediments and oceanic crystalline crust, the gravity models reveal an unexpected heterogeneous mantle with densities of 3.30 × 103, 3.20 × 103 and 3.10 × 103 kg/m3 near the Gakkel Ridge. We interpret that the upper mantle heterogeneity mainly results from serpentinisation and thermal effects. The thickness of the oceanic crust is highly variable throughout both transects. Crustal thickness of less than 1 km dominates in the oldest parts of both basins, increasing to a maximum value of 6 km near the Gakkel Ridge. Along-axis heat flow is highly variable and heat flow amplitudes resemble those observed at fast or intermediate spreading ridges. Unexpectedly, high heat flow along the Amundsen transect exceeds predicted values from global cooling curves by more than 100%.

Description: Live-collected samples of four common reefbuilding coral genera (Acropora, Pocillopora, Goniastrea, Porites) from subtidal and intertidal settings of Heron Reef, Great Barrier Reef, show extensive early marine diagenesis where parts of the coralla less than 3 years old contain abundant macro- and microborings and aragonite, high-Mg calcite, low-Mg calcite, and brucite cements. Many types of cement are associated directly with microendoliths and endobionts that inhabit parts of the corallum recently abandoned by coral polyps. The occurrence of cements that generally do not precipitate in normal shallow seawater (e.g., brucite, low-Mg calcite) highlights the importance of microenvironments in coral diagenesis. Cements precipitated in microenvironments may not reXect ambient seawater chemistry. Hence, geochemical sampling of these cements will contaminate trace-element and stable-isotope inventories used for palaeoclimate and dating analysis. Thus, great care must be taken in vetting samples for both bulk and microanalysis of geochemistry. Visual inspection using scanning electron microscopy may be required for vetting in many cases.

Description: Analysis of ten- and four-year datasets for the large, shallow, subtropical, and eutrophic Lakes Okeechobee (USA) and Taihu (China), respectively, suggest that resource-ratio explanations for cyanobacteria dominance may not apply to these two lakes. Datasets were examined to identify relationships between nutrient ratios [total nitrogen (TN):total phosphorus (TP) and ammonium (NH4+):oxidized N (NOx)] and phytoplankton community structure (as proportions of cyanobacteria and diatoms to total phytoplankton biomass). Datasets were pooled by sampling month, averaged lake-wide, and analyzed with linear regression. In Okeechobee, the cyanobacteria proportion increased and the diatom proportion decreased with increasing TN:TP. In Taihu, cyanobacteria decreased with increasing TN:TP, but the opposite trend observed for diatoms was marginally significant. Okeechobee cyanobacteria increased and diatoms decreased with increasing NH4+:NOx, but no significant relationships between phytoplankton and NH4+:NOx were observed in Taihu. Both lakes had significant relationships between phytoplankton community structure and total nutrients, but these relationships were the opposite of those expected. Relationships between phytoplankton community structure and water quality parameters from the previous month resulted in improved relationships, suggesting a predictive capability. Statistical analysis of the entire datasets (not pooled) supported these and additional relationships with other parameters, including temperature and water clarity.

Description: The published mean δ34S values of ore-related pyrites from orogenic gold deposits of the Eastern Goldfields Province, Yilgarn Craton lie between −4‰ and +4‰. As for orogenic gold deposits worldwide, most deposits have positive means and a restricted range of δ34S values, but some have negative means and wider ranges of δ34S values. Wall-rock carbonation and back-mixing of similar-source fluids with different fluid pathways can explain some of the more negative δ34S signatures. However, structural setting appears to be the most important factor controlling ore-fluid oxidation state and hence the distribution of δ34S values in gold-related pyrites. Shear-hosted deposits appear to have experienced fluid-dominated processes such as phase separation, whereas stockwork, vein-hosted or disseminated deposits formed under conditions of greater rock buffering. At Victory-Defiance, in particular, negative δ34S values are more common in gently dipping dilational structures, compared to more compressional steeply dipping structures. It appears most likely that fluid-pressure fluctuations during fault-valve cycles establish different fluid-flow regimes in structures with different orientations. Rapid fluid-pressure fluctuations in dilational structures during seismic activity can cause partitioning of reduced gas phases from the ore fluid during extreme phase separation and hence are an effective method of ore-fluid oxidation, leading to large, local fluctuations in oxidation state. It is thus not necessary to invoke mixing with oxidised magmatic fluids to explain δ34S signatures indicative of oxidation. In any case, available, robust geochronology in the Eastern Goldfields Province does not support the direct involvement of oxidised magmatic fluids from adjacent granitic intrusions in orogenic gold genesis. Thus, negative mean δ34S values and large variations in δ34S values of ore-related pyrites in world-class orogenic gold deposits are interpreted to result from multiple mechanisms of gold precipitation from a single, ubiquitous ore fluid in varying structural settings, rather than from the involvement of oxidised ore fluids from a different source. Such signatures are indicative, but not diagnostic, of anomalously large orogenic gold systems.

Description: The construction of S-wave velocity models of marine sediments down to hundreds of meters below the seafloor is important in a number of disciplines. One of the most significant trends in marine geophysics is to use interface waves to estimate shallow shear velocities which play an important role in determining the shallow crustal structure. In marine settings, the waves trapped near the fluid-solid interface are called Scholte waves, and this is the subject of the study. In 1998, there were experiments on the Ninetyeast Ridge (Central Indian Ocean) to study the shallow seismic structure at the drilled site. The data were acquired by both ocean bottom seismometer and ocean bottom hydrophone. A new type of seafloor implosion sources has been used in this experiment, which successfully excited fast and high frequency (> 500 Hz) body waves and slow, intermediate frequency (〈 20 Hz) Scholte waves. The fundamental and first higher mode Scholte waves have both been excited by the implosion source. Here, the Scholte waves are investigated with a full waveform modeling and a group velocity inversion approach. Shear wave velocities for the uppermost layers of the region are inferred and results from the different methods are compared. We find that the full waveform modeling is important to understand the intrinsic attenuation of the Scholte waves between 1 and 20 Hz. The modeling shows that the S-wave velocity varies from 195 to 350 m/s in the first 16 m of the uppermost layer. Depths levels of high S-wave impedance contrasts compare well to the layer depth derived from a P-wave analysis as well as from drilling data. As expected, the P- to S-wave velocity ratio is very high in the uppermost 16 m of the seafloor and the Poisson ratio is nearly 0.5. Depth levels of high S-wave impedance contrasts are comparable to the layer depth derived from drilling data.