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  • 1
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    Wiley
    In:  Chichester, 2nd ed., xvii + 517 pp., Wiley, vol. 5, no. 22, pp. 662-664, (ISBN 0-470-87000-1 (HB), ISBN 0-470-87001-X (PB))
    Publication Date: 2005
    Keywords: GIS ; Textbook of informatics ; Textbook of geography ; geography ; management ; policy
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  • 2
    Publication Date: 2019-09-23
    Description: Large volcanic edifices are often shaped by the coalescence of adjacent volcanoes as well as intrusive rift zones and gravitational spreading. To better understand the structure of such volcanoes we designed analogue experiments simulating gravitational spreading of an edifice made by overlapping cones of different age, and examined the formation of rift zones. The results allow distinction of two main rift geometries. (i) Spreading edifices of similar age that partly overlap, tend to develop a rift zone approximately perpendicular to the boundary of both volcanoes. Such a rift zone causes two volcanoes to grow together and form an elongated topographic ridge. (ii) Partly overlapping volcanoes of different age are spreading at different rates and thus form a rift zone parallel to the boundary of both volcanoes. Such a rift zone causes two volcanoes to structurally separate. The results are widely applicable for large volcanoes subject to rifting and flank spreading, which we demonstrate for Réunion Island and for southern Hawaii.
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  • 3
    Publication Date: 2017-07-03
    Description: The early life-history of Chinese rock carp Procypris rabaudi was investigated during a 56-day rearing period: 318 artificially propagated P. rabaudi larvae were reared throughout metamorphosis in a small-scale recirculation system (345 L water volume, 10 × 18 L rearing tanks, 150 L storage and filter compartment with bioballs, 20–30 larvae L−1) at the Institute of Hydrobiology, Wuhan, Hubei Province, China. The newly hatched larvae had an initial total length of 8.93 ± 0.35 mm SD (n = 10) at 3 days post-hatch and reached an average total length of 33.29 mm (±1.88 mm SD, n = 10) 56 days after hatching. Length increment averaged 0.45 mm day−1, resulting in a mean growth of 24.4 mm within the 56-day period. High mortality rates of up to 92% derived from an introduced fungus infection and subsequent treatment stress with malachite green. Our results indicate that Chinese rock carp can be raised successfully from artificially fertilized eggs. We therefore assume this species to be a candidate for commercial aquaculture.
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  • 4
    Publication Date: 2017-06-27
    Description: Anaerobic methane-oxidizing microbial communities in sediments at cold methane seeps are important factors in controlling methane emission to the ocean and atmosphere. Here, we investigated the distribution and carbon isotopic signature of specific biomarkers derived from anaerobic methanotrophic archaea (ANME groups) and sulphate-reducing bacteria (SRB) responsible for the anaerobic oxidation of methane (AOM) at different cold seep provinces of Hydrate Ridge, Cascadia margin. The special focus was on their relation to in situ cell abundances and methane turnover. In general, maxima in biomarker abundances and minima in carbon isotope signatures correlated with maxima in AOM and sulphate reduction as well as with consortium biomass. We found ANME-2a/DSS aggregates associated with high abundances of sn-2,3-di-O-isoprenoidal glycerol ethers (archaeol, sn-2-hydroxyarchaeol) and specific bacterial fatty acids (C16:1ω5c, cyC17:0ω5,6) as well as with high methane fluxes (Beggiatoa site). The low to medium flux site (Calyptogena field) was dominated by ANME-2c/DSS aggregates and contained less of both compound classes but more of AOM-related glycerol dialkyl glycerol tetraethers (GDGTs). ANME-1 archaea dominated deeper sediment horizons at the Calyptogena field where sn-1,2-di-O-alkyl glycerol ethers (DAGEs), archaeol, methyl-branched fatty acids (ai-C15:0, i-C16:0, ai-C17:0), and diagnostic GDGTs were prevailing. AOM-specific bacterial and archaeal biomarkers in these sediment strata generally revealed very similar δ13C-values of around −100. In ANME-2-dominated sediment sections, archaeal biomarkers were even more 13C-depleted (down to −120), whereas bacterial biomarkers were found to be likewise 13C-depleted as in ANME-1-dominated sediment layers (δ13C: −100). The zero flux site (Acharax field), containing only a few numbers of ANME-2/DSS aggregates, however, provided no specific biomarker pattern. Deeper sediment sections (below 20 cm sediment depth) from Beggiatoa covered areas which included solid layers of methane gas hydrates contained ANME-2/DSS typical biomarkers showing subsurface peaks combined with negative shifts in carbon isotopic compositions. The maxima were detected just above the hydrate layers, indicating that methane stored in the hydrates may be available for the microbial community. The observed variations in biomarker abundances and 13C-depletions are indicative of multiple environmental and physiological factors selecting for different AOM consortia (ANME-2a/DSS, ANME-2c/DSS, ANME-1) along horizontal and vertical gradients of cold seep settings.
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  • 5
    Publication Date: 2015-02-06
    Description: CORONA images have been used for the mapping of periglacial features on the Bykovsky Peninsula and adjacent Khorogor Valley in northeast Siberia. Features, mapped and analysed within a geographical information system, include thermokarst depressions, thermo-erosional valleys, thermo-erosional cirques, thermokarst lakes, thermokarst lagoons and pingos. More than 50% of the area is strongly influenced by thermally-induced subsidence. Thermokarst in the area is probably less active today than in the early-middle Holocene.
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  • 6
    Publication Date: 2016-11-04
    Description: The novel candidate phylum Poribacteria is specifically associated with several marine demosponge genera. Because no representatives of Poribacteria have been cultivated, an environmental genomic approach was used to gain insights into genomic properties and possibly physiological/functional features of this elusive candidate division. In a large-insert library harbouring an estimated 1.1 Gb of microbial community DNA from Aplysina aerophoba, a Poribacteria-positive 16S rRNA gene locus was identified. Sequencing and sequence annotation of the 39 kb size insert revealed 27 open reading frames (ORFs) and two genes for stable RNAs. The fragment exhibited an overall G+C content of 50.5% and a coding density of 86.1%. The 16S rRNA gene was unlinked from a conventional rrn operon. Its flanking regions did not show any synteny to other 16S rRNA encoding loci from microorganisms with unlinked rrn operons. Two of the predicted hypothetical proteins were highly similar to homologues from Rhodopirellula baltica. Furthermore, a novel kind of molybdenum containing oxidoreductase was predicted as well as a series of eight ORFs encoding for unusual transporters, channel or pore forming proteins. This environmental genomics approach provides, for the first time, genomic and, by inference, functional information on the so far uncultivated, sponge-associated candidate division Poribacteria.
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  • 7
    Publication Date: 2015-02-23
    Description: Samples from three hot springs (Alla, Seya and Garga) located in the northeastern part of Baikal rift zone (Buryat Republic, Russia) were screened for the presence of thermophilic nitrifying bacteria. Enrichment cultures were obtained solely from the Garga spring characterized by slightly alkaline water (pH 7.9) and an outlet temperature of 75°C. The enrichment cultures of the ammonia- and nitrite oxidizers grew at temperature ranges of 27–55 and 40–60°C, respectively. The temperature optimum was approximately 50°C for both groups and thus they can be designated as moderate thermophiles. Ammonia oxidizers were identified with classical and immunological techniques. Representatives of the genus Nitrosomonas and Nitrosospira-like bacteria with characteristic vibroid morphology were detected. The latter were characterized by an enlarged periplasmic space, which has not been previously observed in ammonia oxidizers. Electron microscopy, denaturing gradient gel electrophoresis analyses and partial 16S rRNA gene sequencing provided evidence that the nitrite oxidizers were members of the genus Nitrospira.
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  • 8
    Publication Date: 2016-11-04
    Description: Previously uncultured nitrite-oxidizing bacteria affiliated to the genus Nitrospira have for the first time been successfully enriched from activated sludge from a municipal wastewater treatment plant. During the enrichment procedure, the abundance of the Nitrospira-like bacteria increased to approximately 86% of the total bacterial population. This high degree of purification was achieved by a novel enrichment protocol, which exploits physiological features of Nitrospira-like bacteria and includes the selective repression of coexisting Nitrobacter cells and heterotrophic contaminants by application of ampicillin in a final concentration of 50 µg ml−1. The enrichment process was monitored by electron microscopy, fluorescence in situ hybridization (FISH) with rRNA-targeted probes and fatty acid profiling. Phylogenetic analysis of 16S rRNA gene sequences revealed that the enriched bacteria represent a novel Nitrospira species closely related to uncultured Nitrospira-like bacteria previously found in wastewater treatment plants and nitrifying bioreactors. The enriched strain is provisionally classified as ‘Candidatus Nitrospira defluvii’.
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  • 9
    Publication Date: 2016-11-04
    Description: For the understanding and assessment of recent and future carbon dynamics of arctic permafrost soils the processes of CH4 production and oxidation, the community structure and the quality of dissolved organic matter (DOM) were studied in two soils of a polygonal tundra. Activities of methanogens and methanotrophs differed significantly in their rates and distribution patterns among the two investigated profiles. Community structure analysis showed similarities between both soils for ester-linked phospholipid fatty acids (PLFAs) and differences in the fraction of unsaponifiable PLFAs and phospholipid ether lipids. Furthermore, a shift of the overall composition of the microbiota with depth at both sites was indicated by an increasing portion of iso- and anteiso-branched fatty acids related to the amount of straight-chain fatty acids. Although permafrost soils represent a large carbon pool, it was shown that the reduced quality of organic matter leads to a substrate limitation of the microbial metabolism. It can be concluded from our and previous findings first that microbial communities in the active layer of an Arctic polygon tundra are composed by members of all three domains of life, with a total biomass comparable to temperate soil ecosystems, and second that these microorganisms are well adapted to the extreme temperature gradient of their environment.
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  • 10
    Publication Date: 2015-06-30
    Description: Induced breeding of climbing perch, Anabas testudineus was conducted by synthetic hormone Wova-FH in the intensity level of 0.1, 0.2 and 0.3 mL kg−1 of body weight respectively. The brooders were injected one time and left to spawn in the spawning hapa in the sex ratio between male and female as 2:1. It was found that at all the intensity level hormone Wova-FH could enhance the fishes to breed and lay eggs whereas no breeding was observed in control set. The spawning time, quantity of the brooder spawn, fertilization rate, hatching rate and survival rate were quantified in each set of experiment. The egg output/female was significantly higher in 0.3 mL in comparison with 0.1 and 0.2 mL kg−1 of body weight. The statistical analysis showed significant (P≤0.05) effect between hormone dose on fertilization rate, egg output and hatching rate. The present experiment suggests that Wova-FH at the dose of 0.3 mL kg−1 body weight of fish is more effective which might be considered for raising captive population.
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  • 11
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    Wiley
    In:  FEMS Microbiology Ecology, 55 (2). pp. 167-177.
    Publication Date: 2015-08-07
    Description: The discovery of phylogenetically complex, yet highly sponge-specific microbial communities in marine sponges, including novel lineages and even candidate phyla, came as a surprise. At the same time, unique research opportunities opened up, because the microorganisms of sponges are in many ways more accessible than those of seawater. Accordingly, we consider sponges as microbial fermenters that provide exciting new avenues in marine microbiology and biotechnology. This review covers recent findings regarding diversity, biogeography and population dynamics of sponge-associated microbiota, and the data are discussed within the larger context of the microbiology of the ocean.
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  • 12
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    Wiley
    In:  Wildlife Society Bulletin, 33 (1). pp. 337-342.
    Publication Date: 2016-05-26
    Description: Detailed studies of the behavior and location of free-ranging animals can be considerably enhanced with the use of animal-mounted devices. A few devices, such as data loggers, have to be recovered to access the data, whereas satellite tags or radiocollars often are left on the animal after the study period. Recovery of devices, which usually necessitates animal recapture, can be problematic, especially in larger species. This paper presents a new, non-electronic release mechanism, requiring no power source on the animal, that was successfully tested on South American sea lions (Otaria flavescens) in Argentina during the 2003–2004 austral summer. The system has potential for many larger terrestrial or aquatic animals.
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  • 13
    Publication Date: 2018-07-04
    Description: The great cormorant Phalacrocorax carbo is thought to have a wettable plumage, providing low body insulation during foraging. Great cormorants should thus be constrained by water temperatures, and show high energy requirements. Surprisingly, this species has one of the widest breeding distributions of all diving birds, and does not require more food than these other species. We explored this apparent paradox by comparing the insulative properties of body plumage in four subspecies of great cormorants ranging from tropical to polar regions. We found that all subspecies retained an insulating air layer in their plumage, which was, however, much thinner than for other species of diving birds. Detailed examination of the plumage showed that each cormorant body feather has a loose, instantaneously wet, outer section and a highly waterproof central portion. This indicates that the plumage of great cormorants is only partly wettable, and that birds maintain a thin layer of air in their plumage. Our findings suggest an unusual morphological-functional adaptation to diving which balances the antagonist constraints of thermoregulation and buoyancy.
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  • 14
    Publication Date: 2017-01-16
    Description: 1. Herbivorous zooplankton maintain a rather constant elemental composition in their body mass as compared with the variability commonly encountered in their food. Furthermore, their high phosphorus (P) and nitrogen (N) content means that they often face an excess of carbon (C) in their diet. Regulation of this surplus of energy may occur via modulation of assimilation efficiency, or postassimilation by increased respiration (CO2) and/or excretion dissolved organic carbon, DOC. Whereas several studies have examined the effect of elemental imbalance in the genus Daphnia, few have examined other zooplankton taxa. 2. We investigated whether the rotifer Brachionus calyciflorus uses increased respiration as a means of stoichiometrically regulating excess dietary C. Growth rate and respiration were measured under different food qualities (C : N and C : P ratios). 3. Both C : N and C : P ratios in food had strong effects on growth rate, demonstrating strong nutrient limitation of rotifer growth when nutrient elements were depleted in the diet and indicating the need for stoichiometric regulation of excess ingested C. 4. Respiration measurements, supported by a stoichiometric model, indicated that excess C was not released as CO2 in B. calyciflorus and that nutrient balance must therefore be maintained by other means such as excretion of DOC or egestion in faecal material.
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  • 15
    Publication Date: 2018-07-16
    Description: Isostatic considerations exhibit differences between the northern, central and southern parts of the Pacific–Australian plate collision in South Island, New Zealand. In the northern part mean elevations are moderate and the gravity low is small; the central part contains the highest elevations, and gravity and elevations correspond to each other relatively well; and in the southern part the gravity low is strongest whereas the mean elevations are moderate again. These differences indicate changes in the character of the isostatic compensation and are explained by increased thickening and widening of the crustal root from north to south, and also by the long wavelength gravity response to a mantle density anomaly that increases towards the south. A simple 3‐D gravity model is derived that includes the detailed crustal structures from the South Island GeopHysical Transect (SIGHT) experiment as well as a high‐density anomaly in the mantle inferred from teleseismic data. The model indicates that cold and, therefore, dense upper mantle material penetrates the asthenosphere to a greater extent in the south, similar to the behaviour of an apparently highly ductile lower crust. As plate reconstruction suggests more lithospheric shortening in the north, our model corresponds to lithospheric material escaping laterally to the south, almost perpendicular to the compression caused by lithospheric shortening of the mantle. Therefore, in addition to the prevailing mantle shear in New Zealand, there may also be a component of extrusional mantle creep beneath the Southern Alps orogen, which could have caused some of the observed large seismic anisotropy in this region. We may have also found evidence for submerged Eocene–Miocene oceanic lithosphere beneath the southeastern part of South Island that has been unaccounted for after plate reconstruction.
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  • 16
    Publication Date: 2017-07-04
    Description: 1 Plants must either tolerate consumption or defend themselves against grazer attacks. Selection for phenotypically plastic antiherbivory responses has been suggested for many plants, including a few species of seaweed, but little is known about its specificity or seasonality. 2 Multi-factorial experiments tested the effects of consumer identity (Littorina brevicula vs. Haliotis discus) and season (summer vs. autumn) on the induction of antiherbivory defences in the brown seaweed Ecklonia cava. Following a grazer-free acclimation phase, algae were incubated with grazers (treatment phase) and, subsequently, without grazers (recovery phase). Feeding preference assays, were used to assess differences in consumption rates between grazer-exposed and control plants. 3 In summer, Littorina, but not Haliotis, induced defence in Ecklonia. This defence vanished by the end of the recovery phase. In autumn, neither exposure to direct attack nor to waterborne cues induced defensive responses. 4 Both consumer identity and season of consumption can influence the ability of a given macroalgal species to induce antiherbivory defences. Tailoring such responses to spatial and temporal variation in grazer pressure could have profound ecological implications, for example changing food webs and community structure.
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  • 17
    Publication Date: 2020-07-27
    Description: Aspects of the formation of bone analog composites at 37°C are described. The composites are composed of hydroxyapatite (HAp) and the calcium salt of a biocompatible polymer and are capable of forming under in vivo conditions. Composite formation involves the formation of monolithic HAp from particulate calcium phosphate precursors while Ca ions liberated to the aqueous medium in which this reaction is occurring form crosslinks with the acidic polymer. The reactants are poly[bis(carboxylatophenoxy)phosphazene] (acid-PCPP), tetracalcium phosphate [Ca4(PO4)2O, TetCP], and anhydrous dicalcium phosphate (CaHPO4, DCPA). The effects of the proportion of polymer (5, 10, or 15 wt %) on the kinetics of HAp formation were studied. Compositional evolution of the solid calcium phosphates present was followed by X-ray diffraction and infrared spectroscopy analyses. HAp formation through a dissolution-precipitation process provided a mildly alkaline medium suitable for deprotonation of the acid-PCPP and for the formation of the calcium crosslinks, as monitored by infrared spectroscopy. Concurrence of crosslinking of the polymer and HAp formation was established, indicating true composite formation can be realized at physiologic temperature.
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  • 18
    Publication Date: 2019-09-23
    Description: 1. Tracer experiments with two diatoms labelled with 13C (Nitzschia palea) and 15N (Fragilaria crotonensis), were conducted to investigate feeding selectivity and interspecific competition between the grazers Asellus aquaticus (Isopoda, Crustacea) and Potamopyrgus antipodarum (Hydrobiidae, Gastropoda). Conventional methods, such as cell counts and estimated biovolume, were used first to detect feeding preferences within the different grazer treatments. 2. The results revealed a significant decline in algal biovolume in all grazer treatments and no indications of active selectivity were observed. In contrast to conventional methods, measurements based on isotope signatures showed strong differences in tracer uptake, thus indicating different degrees of assimilation and digestion by the two grazers. 3. The selectivity index Q, which provides information on the uptake ratio of 13C to 15N, showed a significant time effect for both grazer species and a significant difference between single- and mixed-grazer treatments for P. antipodarum. Thus, this technique enabled the direct quantification of the uptake by grazers and, therefore, served as an ideal tool for the detection of passive selectivity. 4. Our results indicate a shift in feeding preferences related to between-species competition and a potential divergence of trophic niches when species coexist.
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  • 19
    Publication Date: 2019-01-21
    Description: We investigated the wound response of the commercially important red alga, Gracilaria chilensis, in order to obtain insight into its interaction with epiphytic pests. After wounding, the host releases free fatty acids as well as the hydroxylated eicosanoids, 8R-hydroxy eicosatetraenoic acid (8-HETE) and 7S,8R-dihydroxy eicosatetraenoic acid (7,8-di-HETE). While the release of free arachidonic acid and subsequent formation of 8-HETE is controlled by phospholipase A, 7,8-di-HETE production is independent of this lipase. This dihydroxylated fatty acid might be directly released from galactolipids. Physiologically relevant concentrations of oxylipins reduced spore settlement of Acrochaetium sp. (Rhodophyta, Acrochaetiaceae) and suppressed the development of hapteria in Ceramium rubrum (Rhodophyta, Ceramiaceae) when these model epiphytes were exposed to artificial surfaces that contained 8-HETE or 7,8-di-HETE. Thus, the immediate release of oxylipins can be seen as G. chilensis defence against epiphytes.
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  • 20
    Publication Date: 2017-07-03
    Description: The monthly variation in reproductive cycle, condition factor (fatness), gonad index (GI), ovarian egg diameter and biochemical composition [RNA, DNA content and their ratio RNA/DNA (R/D)] were compared to determine the spawning season of the purplish Washington clam, Saxidomus purpuratus, collected from the west sea of Taean, Korea. All these factors were correlated to the spawning season from May to October. Monthly variation and concentration of the R/D ratio especially represented indicative information about the processes of gonad development and spawning patterns. The increases in R/D ratio in the ovaries corresponded with increases in ovarian egg diameters and the GI during the spawning season. The peak of R/D and RNA content in females was a good indicator of sexual maturation and the DNA content in males. During winter between November and January, the value of fatness, GI, egg size, RNA and DNA content were lower than in other seasons, indicating depletion of energy reserves and lower metabolic demands because of colder temperatures.
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  • 21
    Publication Date: 2018-07-13
    Description: Fluids are suspected to play a major role in the nucleation and rupture propagation of earthquakes. In Chile, seismological data were previously interpreted to indicate that fluids captured in the fault zone are released periodically during large underthrust earthquakes, leading to post-seismic fluid flow. In central Chile, heat flow derived from the presence of a bottom simulating reflector (BSR) show a smooth trend across the margin. BSR-derived data are in excellent agreement with thermal subduction zone models. Over the young accretionary prism, both BSR-derived and measured surface heat flow support a common trend. Landwards of the backstop, however, measured heat flow triples over a distance of 20–30 km, producing a profound discrepancy to the BSR-derived data. We suggest that this disparity is related to transient flow of warm fluids through the gas hydrate stability zone possibly caused by fluids released after large underthrust earthquakes. Such flow events may inherently affect the distribution of solid gas hydrates between the seafloor and the BSR.
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  • 22
    Publication Date: 2018-05-16
    Description: We present in situ biophysical measurements and bioassay experiments that demonstrate iron limitation of primary productivity during the spring bloom in the central North Atlantic. Mass balance calculations indicate that nitrate drawdown is iron (Fe)-limited and that aeolian Fe supply to this region cannot support maximal phytoplankton growth during the bloom. Using a simple simulation model, we show that relief of Fe limitation during the spring bloom can increase nitrate drawdown and, hence, new primary production, by 70%. We conclude that the episodic nature of iron supplied by dust deposition is an important factor controlling the dynamics of the spring bloom. From this, we hypothesize that variability in the timing and magnitude of the spring bloom in response to aeolian Fe supply will affect carbon drawdown and food web dynamics in the central North Atlantic
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  • 23
    Publication Date: 2018-07-16
    Description: A bottom simulating reflector (BSR), which marks the base of the gas hydrate stability zone, has been detected for the first time in seismic data of the Black Sea. The survey area is in the northwestern Black Sea at 44°–45°N and 31.5°–32.5°E. In this paper, seismic wide-angle ocean bottom hydrophone (OBH) and ocean bottom seismometer (OBS) data are investigated with the goal to quantify the gas hydrate and free gas saturation in the sediment. An image of the subsurface is computed from wide-angle data by using Kirchhoff depth migration. The image shows the BSR at 205–270 m depth below the seafloor and six to eight discrete layer boundaries between the seafloor and the BSR. The top of the hydrate layer and the bottom of the gas layer cannot be identified by seismic reflection signals. An analysis of traveltimes and reflection amplitudes leads to 1-D P-wave velocity–depth and density–depth models. An average S-wave velocity of 160 m s−1 between the seafloor and the BSR is determined from the traveltime of the P to S converted wave. The normal incidence PP reflection coefficient at the BSR is −0.11, where the P-wave velocity decreases from 1840 to 1475 m s−1. Velocities and density are used to compute the porosity and the system bulk modulus as a function of depth. The Gassmann equation for porous media is used to derive explicit formulae for the gas hydrate and free gas saturation, which depend on porosity and on the bulk moduli of the dry and saturated sediment. A gas hydrate saturation–depth profile is obtained, which shows that there is 38 ± 10 per cent hydrate in the pore space at the BSR depth, where the porosity is 57 per cent (OBS 24). This value is derived for the case that the gas hydrate does not cement the sediment grains, a model that is supported by the low S-wave velocities. There is 0.9 or 0.1 per cent free gas in the sediment below the BSR, depending on the model for the gas distribution in the sediment. The free gas layer may be more than 100 m thick as a result of a zone of enhanced reflectivity, which can be identified in the subsurface image.
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  • 24
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    Wiley
    In:  Journal of Phycology, 41 (5). pp. 950-956.
    Publication Date: 2018-05-30
    Description: The influence of fluctuating light on diversity and species number of a natural phytoplankton assemblage competing for nutrients was investigated for 48 days under semicontinuous culture conditions. Light conditions were either changed periodically from high (65 μmol photons·m−2·s−1) to low intensity (15 μmol photons·m−2·s−1) at intervals of 1, 3, 6, and 12 days or fixed at constant light conditions of intermediate intensity (40 μmol photons·m−2·s−1). Fluctuating light at intervals of 1–12 days significantly affected phytoplankton diversity. The development of phytoplankton communities differed in treatments with different light regimes. In treatments with long light intervals, species abundance oscillated with the light phases. Differences in the temporal development of phytoplankton communities resulted in hump‐shaped relations between the interval length of the light phases and both species number and diversity index and can be explained by the intermediate disturbance hypothesis. Fluctuating light tends to sustain phytoplankton diversity under nutrient limitation if the light regime changes in the order of several days. This indicates that temporal changes in weather regime are important in preventing competitive exclusion of phytoplankton species in nature.
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  • 25
    Publication Date: 2020-06-15
    Description: This paper presents a three‐dimensional (3D) seismic analysis of sediment remobilization and fluid migration in a 2000‐km2 area above the Gjallar Ridge located in the Vøring Basin, offshore Norway. Three distinct types of mounded structures have been identified as resulting from focused fluid/gas migration and associated mud remobilization and intrusion. Type A structures are gently mounded, and we infer that these structures formed because of in situ remobilization of Middle Eocene to Lower–Middle Oligocene fine‐grained sediments in response to fluid and minor sediment injection via deep‐seated normal faults. Type B structures comprise relatively steep‐sided mounds and are restricted to the pre‐Miocene interval. They are often located above narrow zones of discontinuous low‐amplitude reflections resembling gas chimneys. Some of the Type B structures are associated with stacked amplitude anomalies and possible mud volcanoes at the base Pleistocene indicating their long‐term significance as vertical fluid conduits. Type C structures comprise discrete mound features that seem to jack up the Top Palaeocene (Top Brygge) horizon. These are similar to hydrothermal mounds found elsewhere on the Norwegian Margin and associated with igneous sill intrusion during North Atlantic breakup. This study highlights the utility of 3D seismic data for mapping of fluid and sediment mobilization through time over large basinal areas.
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  • 26
    Publication Date: 2018-05-30
    Description: Herbivory is particularly intense in tropical benthic communities, suggesting preference of constitutive, rather than inducible, anti-herbivory defense. The objective of the study was to examine whether anti-herbivore defenses in the red alga Hypnea pannosa J. Agardh and the brown algae Sargassum asperifolium Hering and G. Martens ex J. Agardh and Cystoseira myrica (S.G. Gmelin) C. Agardh could be induced and subsequently reduced in response to grazing by the amphipod Cymadusa filosa Savigny. During a 14-day treatment phase, algae were exposed to amphipod grazing or were left ungrazed (control). Subsequently, one subset of algae was used in feeding assays, whereas another was cultivated for additional 14 days without consumers (recovery phase). At the end of each phase, bioassays were conducted to detect defensive traits in terms of differences in consumption rates of grazed and control pieces of live algae and agar-based food containing nonpolar algal extracts. Consumption of grazed live S. asperifolium and H. pannosa specimens was lower than of control algae. Furthermore, nonpolar extracts of grazed S. asperifolium and C. myrica were less preferred than those from control algae. Defensive responses were exclusively detected after the treatment phase, although strong preference of ungrazed H. pannosa and C. myrica over grazed conspecifics continued throughout the recovery phase. These findings suggest that phenotypic plasticity in anti-herbivory defense of marine macroalgae 1) might be more common than previously shown, 2) could be switched on and off within 2 weeks, and 3) can be found in nonpolar algal extracts.
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  • 27
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    In:  Journal of Experimental Zoology Part B: Molecular and Developmental Evolution, 306B (3). pp. 204-215.
    Publication Date: 2017-07-11
    Description: The dentition of osteichthyans presents an astonishing diversity with regard to the distribution of teeth in the oral cavity, tooth numbers, arrangements, shapes, and sizes. Taking examples from three unrelated teleosts—the most speciose group of osteichthyans—and from the literature, this study explores how the initial tooth pattern is set up, and how this relates to the establishment and maintenance (or modification) of the tooth replacement pattern. In teleosts, first-generation teeth (the very first teeth in ontogeny to develop at a particular locus) are commonly initiated in adjacent or in alternate (odd and even) positions. The mechanisms responsible for these divergent developmental patterns remain to be elucidated, in particular, whether they reflect a field or local type of control. However, patterns of adjacent or alternate tooth initiation, set up by the first-generation teeth, can easily turn into replacement patterns where new teeth are initiated simultaneously every second, or even every third position, by synchronizing the formation of new first-generation teeth to the formation of replacement teeth at older loci. Our observations suggest that, once established, the replacement pattern appears to be maintained, as a kind of “default” state. Variations and modifications in this pattern are nevertheless common and suggest that tooth replacement is under local control, exerted at the level of the initiation of replacement teeth. Further studies are needed to test the hypothesis that regular replacement patterns are more frequent in association with the plesiomorphic condition of extramedullary replacement (replacement on the surface of the dentigerous bone) and more rare in the derived condition of intramedullary replacement (replacement within the medullary cavity of the dentigerous bone)
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  • 28
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    In:  Journal of Applied Ichthyology, 22 . pp. 241-253.
    Publication Date: 2017-07-03
    Description: This study presents a historical review, a meta-analysis, and recommendations for users about weight–length relationships, condition factors and relative weight equations. The historical review traces the developments of the respective concepts. The meta-analysis explores 3929 weight–length relationships of the type W = aLb for 1773 species of fishes. It shows that 82% of the variance in a plot of log a over b can be explained by allometric versus isometric growth patterns and by different body shapes of the respective species. Across species median b = 3.03 is significantly larger than 3.0, thus indicating a tendency towards slightly positive-allometric growth (increase in relative body thickness or plumpness) in most fishes. The expected range of 2.5 〈 b 〈 3.5 is confirmed. Mean estimates of b outside this range are often based on only one or two weight–length relationships per species. However, true cases of strong allometric growth do exist and three examples are given. Within species, a plot of log a vs b can be used to detect outliers in weight–length relationships. An equation to calculate mean condition factors from weight–length relationships is given as Kmean = 100aLb−3. Relative weight Wrm = 100W/(amLbm) can be used for comparing the condition of individuals across populations, where am is the geometric mean of a and bm is the mean of b across all available weight–length relationships for a given species. Twelve recommendations for proper use and presentation of weight–length relationships, condition factors and relative weight are given.
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  • 29
    Publication Date: 2019-09-23
    Description: River discharge of Ob and Yenisei to the Kara Sea is highly variable on seasonal and interannual time scales. River water dominates the shallow bottom water near the river mouths, making it warmer and less saline but seasonally and interannually more changeable than bottom water on the deeper shelf. This hydrographic pattern shows up in measurements and modelling, and in stable isotope records (δ18 O, δ13 C) along the growth axis of bivalve shells and in multiple analyses of single benthic foraminiferal shells. Average isotope ratios increase, but sample-internal variability decreases with water depth and distance from river mouths. However, isotope records of bivalves and foraminifera of a sediment core from a former submarine channel of Yenisei River reveal a different pattern. The retreat of the river mouth from this site due to early Holocene sea level rise led to increasing average isotope values up core, but not to the expected decrease of the in-sample isotope variability. Southward advection of cold saline water along the palaeo-river channel probably obscured the hydrographic variability during the early Holocene. Later, when sediment filled the channel, the hydrographic variability at the core location remained low, because the shallowing proceeded synchronously with the retreat of the river mouth.
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  • 30
    Publication Date: 2020-07-20
    Description: Phytoplankton deal with metal toxicity using a variety of biochemical strategies. One of the strategies involves glutathione (GSH) and phytochelatins (PCs), which are metal-binding thiol peptides produced by eukaryotes and these compounds have been related to several intracellular functions, including metal detoxification, homeostasis, metal resistance and protection against oxidative stress. This paper assesses our state of knowledge on the production of PCs and GSH by marine phytoplankton in laboratory and field conditions and the possible applications of PCs for environmental purposes. Good relationships have been observed between metal exposure and PC production in phytoplankton in the laboratory with Cd, Pb, and Zn showing the greatest efficacy, thereby indicating that PCs have a potential for application as a biomarker. Fewer studies on PC distributions in particulate material have been undertaken in the field. These studies show that free Cu has a strong relationship with the levels of PC in the particulate material. The reason for this could be because Cu is a common contaminant in coastal waters. However it could also be due to the lack of measurements of other metals and their speciation. GSH shows a more complex relationship to metal levels both in the laboratory and in the field. This is most likely due to its multifunctionality. However, there is evidence that phytoplankton act as an important source of dissolved GSH in marine waters, which may form part of the strong organic ligands that control metal speciation, and hence metal toxicity. © 2006 by the Phycological Society of America.
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  • 31
    Publication Date: 2014-08-21
    Description: Baibutoside (5), a new cycloartane-type triterpene glycoside, has been isolated from the roots of Astragalus baibutensis along with four known glycosides, acetylastragaloside I (1), and astragalosides I, II, and IV (2–4, resp.). The structure elucidation of the compounds were achieved by a combination of one- and two-dimensional NMR techniques (DQF-COSY, HSQC, HMBC, and ROESY), and mass spectrometry (ESI-MS), where all the compounds were shown to have cycloastragenol (=(20R,24S)-3β,6α,16β,25-tetrahydroxy-20,24-epoxy-9,19-cyclolanostane) as aglycone. All compounds were tested for in vitro antiprotozoal activity. Compounds 1–4 displayed notable activity vs. Trypanosoma brucei rhodesiense, with acetylastragaloside I (1) being the most potent (IC50 9.5 μg/ml). Acetylastragaloside I (1) was also lethal to T. cruzi (IC50 5.0 μg/ml), and it is the first cycloartane-type triterpene with remarkable trypanocidal activity against both T. brucei rhodesiense and T. cruzi. However, it exhibits some cytotoxicity on mammalian cells.
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  • 32
    Publication Date: 2014-08-21
    Description: Primin (=2-methoxy-6-pentylcyclohexa-2,5-diene-1,4-dione), a natural benzoquinone synthesized in our laboratory, was investigated for its in vitro antiprotozoal, antimycobacterial, and cytotoxic potential. Primin showed very potent activity against Trypanosoma brucei rhodesiense (IC50 0.144 μM) and Leishmania donovani (IC50 0.711 μM), and revealed low cytotoxicity (IC50 15.4 μM) on mammalian cells. Only moderate inhibitory activity was observed against Mycobacterium tuberculosis, Trypanosoma cruzi, and Plasmodium falciparum. When tested for in vivo efficacy in a Trypanosoma b. brucei rodent model, primin failed to cure the infection at 20 mg/kg given intraperitoneally. Primin was too toxic in vivo at a higher concentration (30 mg/kg, injected i.p. route) in mice infected with L. donovani. Taken together, primin can serve as a lead compound for the rational design of more potent and less toxic antiprotozoal agents.
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  • 33
    Publication Date: 2014-08-20
    Description: A total of 58 extracts of different polarity were prepared from various organs of 16 species of Turkish plants and screened for their antitrypanosomal, antileishmanial and antiplasmodial activities. No significant activity was observed against Trypanosoma cruzi, whereas many extracts showed appreciable trypanocidal potential against T. brucei rhodesiense, with the CHCl3-soluble portion of Phlomis kurdica being the most active (IC50 2.7 µg[sol ]mL). Almost all extracts, particularly the CHCl3 phases, exhibited growth inhibition activity against Leishmania donovani amastigotes. The CHCl3-solubles of Putoria calabrica roots (IC50 1.9 µg[sol ]mL), Wendlandia ligustroides leaves (IC50 2.1 µg[sol ]mL) and Rhododendronluteum leaves (IC50 2.3 µg[sol ]mL) displayed the highest leishmanicidal potential. The majority of the extracts also possessed antiplasmodial activity against the multi-drug resistant K1 Plasmodium falciparum strain. The most potent antiplasmodial activity was observed with the CHCl3 extracts of Phlomis kurdica (IC50 1.5 µg[sol ]mL), P. leucophracta (IC50 1.6 µg[sol ]mL), Scrophularia cryptophila (IC50 1.8 µg[sol ]mL), Morina persica (IC50 1.9 µg[sol ]mL) and the aqueous root extract of Asperula nitida subsp. subcapitellata (IC50 1.6 µg[sol ]mL). Twenty-one extracts with significant antimalarial activity (IC50 〈 5 µg[sol ]mL) were also tested for their ability to inhibit the purified enoyl-ACP reductase (FabI), a crucial enzyme in the fatty acid biosynthesis of P. falciparum. The CHCl3 extract of Rhododendronungernii leaves (IC50 10 µg[sol ]mL) and the H2O-soluble portion of Rhododendronsmirnovii leaves (IC50 0.4 µg[sol ]mL) strongly inhibited the FabI enzyme. The preliminary data indicate that some (poly)phenolic compounds are responsible for the FabI inhibition potential of these extracts. The presented work reports for the first time the antiprotozoal activity of nine different genera as well as a target specific antimalarial screening for the identification of P. falciparum FabI inhibitors from medicinal plant extracts.
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  • 34
    Publication Date: 2020-07-31
    Description: Centimeter‐scale mineralogical and chemical analyses of a diffusely venting, ∼280°C sulfide structure (called Roane) from the Mothra Hydrothermal Field on the Juan de Fuca Ridge reveal a complex growth history. These analyses document four well‐defined zones, which from the exterior to the interior of the structure include a barite‐silica zone (Fossil Worm Tube Zone), a silica‐sulfide zone (Silica Zone), a sulfide‐silica zone (Outer Sulfide Zone), and a sulfide ± gordaite ± silica zone (Inner Sulfide Zone). These features are a product of a myriad of processes that include extensive mineral replacement, ingress of seawater, fracturing and breakout of hot hydrothermal fluids, significant conductive cooling, and the sustained, broad‐scale outflow of warm fluids from the walls through a porous and permeable matrix. Roane lacks an open, throughgoing, chalcopyrite‐lined, central conduit. Instead, it hosts an anastomosing, discontinuous network of tortuous channels within the interior of a sponge‐like matrix of amorphous silica, sulfide, sulfate, and clay minerals. Megafaunal communities at the summit and sides of this mature, diffusely venting chimney provide a constructional framework for new growth. Isolation of hydrothermal fluid from seawater during progressive fossilization of megafauna and the early formation of barite‐silica assemblages promote flow of higher‐temperature fluids within the interior. Continued isolation of interior higher‐temperature fluids, through increased mineral precipitation and expansion of the structure, leads to a Zn sulfide + pyrite‐dominated permeable matrix and a network of tortuous channels that form a central porous conduit. This conduit is shielded by a weakly silicified, metal sulfide inner wall and a strongly silicified outer wall. The most outer portions of the walls are highly porous and sites of significant advection and mixing between hydrothermal fluids and seawater. The mineralogy and chemistry of Roane are strongly affected by ammonia‐ammonium buffering of the pH during cooling of the hydrothermal fluids. The two major results of the buffering are (1) precipitation of Zn sulfide at higher temperatures than are typical for bare‐rock systems, leading to the correlation of Cu, Zn, Cd, and Se and (2) increased deposition of amorphous silica and clay minerals.
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  • 35
    Publication Date: 2021-08-23
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  • 36
    Publication Date: 2021-09-06
    Description: The inverse relationship between egg size in marine animals and water temperature was simultaneously described by two outstanding marine scientists: G. Thorson and T.S. Rass. This rule consists of two different phenomena. Thorson's rule describes ecological processes related to changes in larval biology and morphology that are caused by a selective pressure of natural selection on the different types of larval development. It belongs to the realm of macro-evolution. Rass's rule describes physiological processes within populations and species, and between closely related species. This is not related to changes in reproductive strategy, and therefore belongs to the realm of micro-evolution and to the early stages of macro-evolution. Populations begin to produce larger eggs in colder environments because of phenotypic plasticity. Thorson's rule describes temperature-dependent changes in the relative abundance of small- and large-egged species, whereas Rass's rule describes a temperature-dependent relative position of both groups within an adaptive range of reproductive strategies.
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  • 37
    Publication Date: 2021-09-07
    Description: This is the first record of intersexuality to have been found within the Cephalopoda. Seven out of 16 sexually mature Ancistrocheirus lesueurii males from southern African waters had nidamental glands in the mantle cavity in addition to a normally developed male reproductive system (spermatophoric complex, testis and hectocotylus). The frequency of occurrence suggests that feminization in male A. lesueurii is not a rare phenomenon in the south-eastern Atlantic. Normal A. lesueurii shows sexual size dimorphism, with females growing larger than males. The intersexual males formed a distinct size group intermediate between normal males and females, and their testis mass and spermatophore length were significantly larger than in normal males. The absence of oocytes and oviducts in intersexual males indicates that feminization represents pseudohermaphroditism. Intersexuality does not seem to affect male functionality and is apparently advantageous in that larger body size is accompanied by larger testis and spermatophores.
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  • 38
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    In:  Aquaculture Research, 36 (9). pp. 876-881.
    Publication Date: 2021-08-23
    Description: Loligo vulgaris is a commercially important squid throughout the Mediterranean region and is a candidate species in biomedical and aquaculture research. Some loligo species (L. opalescens, L. forbesi, Sepiteuthis lessoniana) have now been cultured through some successive generations in closed, recirculating seawater systems. The effects of salinity on hatching European Squid (L. vulgaris Lamarck, 1798) eggs were investigated during November 2004. The egg capsules were incubated directly in salinity of 32, 34, 36, 38, 40, 42 and 37 g L−1 (control group) at 19.8°C (SD 1.2°C), and a photoperiodicity of 12 h light:12 h dark for 16–23 days before hatching. In all treatments, the eggs were developed and hatched normally after 16–22 days at 32 g L−1, 17–22 days at 34, 18–21 days at 42 g L−1, 18–22 days at 36 and 40 g L−1, 19–22 days at 37 g L−1 and 19–23 h at 38 g L−1. In the experiments, the highest hatching rate and hatching success (HS) of the eggs were obtained at 38 g L−1 (hatching rate: 100% (SD 0%) and HS: 96.7% (SD 3.5%)) and the lowest hatching rate at 42 g L−1 (hatching rate: 3% (SD 6%) and HS: 0%). Dorsal mantle lengths (DML) of new hatchlings ranged from 2.08 to 2.80 mm. The present study showed that salinity affects the hatching rate and HS of eggs and first hatching time and DML of paralarvae in L. vulgaris. The squid eggs at stage 11 (I) can tolerate 5 g L−1 reduction and 3 g L−1 increase in salinity.
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  • 39
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    In:  Geophysical Journal International, 161 (3). pp. 763-788.
    Publication Date: 2018-07-16
    Description: The Galápagos volcanic province (GVP) includes several aseismic ridges resulting from the interaction between the Galápagos hotspot (GHS) and the Cocos–Nazca spreading centre (CNSC). The most prominent are the Cocos, Carnegie and Malpelo ridges. In this work, we investigate the seismic structure of the Carnegie ridge along two profiles acquired during the South American Lithospheric Transects Across Volcanic Ridges (SALIERI) 2001 experiment. Maximum crustal thickness is ∼19 km in the central Carnegie profile, located at ∼85°W over a 19–20 Myr old oceanic crust, and only ∼13 km in the eastern Carnegie profile, located at ∼82°W over a 11–12 Myr old oceanic crust. The crustal velocity models are subsequently compared with those obtained in a previous work along three other profiles over the Cocos and Malpelo ridges, two of which are located at the conjugate positions of the Carnegie ones. Oceanic layer 2 thickness is quite uniform along the five profiles regardless of the total crustal thickness variations, hence crustal thickening is mainly accommodated by layer 3. Lower crustal velocities are systematically lower where the crust is thicker, thus contrary to what would be expected from melting of a hotter than normal mantle. The velocity-derived crustal density models account for the gravity and depth anomalies considering uniform and normal mantle densities (3300 kg m−3), which confirms that velocity models are consistent with gravity and topography data, and indicates that the ridges are isostatically compensated at the base of the crust. Finally, a two-dimensional (2-D) steady-state mantle melting model is developed and used to illustrate that the crust of the ridges does not seem to be the product of anomalous mantle temperatures, even if hydrous melting coupled with vigorous subsolidus upwelling is considered in the model. In contrast, we show that upwelling of a normal temperature but fertile mantle source that may result from recycling of oceanic crust prior to melting, accounts more easily for the estimated seismic structure as well as for isotopic, trace element and major element patterns of the GVP basalts.
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  • 40
    Publication Date: 2018-07-16
    Description: The subduction plate interface along the Nicoya Peninsula, Costa Rica, generates damaging large (Mw 〉 7.5) earthquakes. We present hypocenters and 3-D seismic velocity models (VP and VP/VS) calculated using simultaneous inversion of P- and S-wave arrival time data recorded from small magnitude, local earthquakes to elucidate seismogenic zone structure. In this region, interseismic cycle microseismicity does not uniquely define the potential rupture extent of large earthquakes. Plate interface microseismicity extends from 12 to 26 and from 17 to 28 km below sea level beneath the southern and northern Nicoya Peninsula, respectively. Microseismicity offset across the plate suture of East Pacific Rise-derived and Cocos-Nazca Spreading Center-derived oceanic lithosphere is ∼5 km, revising earlier estimates suggesting ∼10 km of offset. Interplate seismicity begins downdip of increased locking along the plate interface imaged using GPS and a region of low VP along the plate interface. The downdip edge of plate interface microseismicity occurs updip of the oceanic slab and continental Moho intersection, possibly due to the onset of ductile behaviour. Slow forearc mantle wedge P-wave velocities suggest 20–30 per cent serpentinization across the Nicoya Peninsula region while calculated VP/VS values suggest 0–10 per cent serpentinization. Interpretation of VP/VS resolution at depth is complicated however due to ray path distribution. We posit that the forearc mantle wedge is regionally serpentinized but may still be able to sustain rupture during the largest seismogenic zone earthquakes.
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  • 41
    Publication Date: 2017-01-09
    Description: Otolith microstructure analysis and hydrodynamic modelling were combined to study growth patterns in young-of-the-year (YoY) sprat, Sprattus sprattus, which were sampled in October 2002 in the central Baltic Sea. The observed ‘window of survival’, approximated by the distribution of back-calculated days of first feeding (DFF), was narrow compared to the extended spawning season of sprat in the Baltic Sea (mean± SD = 22 June ± 14.1 days) and indicated that only individuals born in summer survived until October 2002. Within the group of survivors, individuals born later in the season exhibited faster larval, but more rapidly decreasing juvenile growth rates than earlier born conspecifics. Back-calculated larval growth rates of survivors (0.48–0.69 mm day−1) were notably higher than those previously reported for average larval sprat populations, suggesting that the YoY population was predominantly comprised of individuals which grew faster during the larval stage. Daily mean temperatures, experienced across the entire YoY population, were derived from Lagrangian particle simulations and correlated with (1) detrended otolith growth and (2) back-calculated, daily somatic growth rates of survivors. The results showed that abrupt changes in ambient temperature can be detected in the seasonal pattern of otolith growth, and that higher temperatures led to significantly faster growth throughout the entire age range of YoY sprat.
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  • 42
    Publication Date: 2018-07-13
    Description: Seismic reflection and refraction data were acquired along the southeast margin of Flemish Cap at a position conjugate to drilling and geophysical surveys across the Galicia Bank margin. The data document first-order asymmetry during final break-up between Newfoundland and Iberia. An abrupt necking profile of continental crust observed off Flemish Cap contrasts strongly with gradual tapering on the conjugate margin. There is no evidence beneath Flemish Cap for a final phase of continental extension that resulted in thin continental crust underlain by a strong ‘S’-like reflection, which indicates that this mode of extension occurred only on the Galicia Bank margin. Compelling evidence for a broad zone of exhumed mantle or for peridotite ridges is also lacking along the Flemish Cap margin. Instead, anomalously thin, 3–4-km-thick oceanic crust is observed. This crust is highly tectonized and broken up by high-angle normal faulting. The thin crust and rift structures that resemble the abandoned spreading centre in the Labrador sea suggest that initial seafloor spreading was affected by processes observed in present-day ultra-slow spreading environments. Landwards, Flemish Cap is underlain by a highly reflective lower crust. The reflectivity most likely originates from older Palaeozoic orogenic structures that are unrelated to extension and break-up tectonics.
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  • 43
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    Wiley
    In:  Ecology Letters, 2006 (9). pp. 652-662.
    Publication Date: 2017-02-23
    Description: Dispersal is a major factor regulating the number of coexisting species, but the relationship between species diversity and ecosystem processes has mainly been analysed for communities closed to dispersal. We experimentally investigated how initial local diversity and dispersal frequency affect local diversity and biomass production in open benthic microalgal metacommunities. Final local species richness and local biomass production were strongly influenced by dispersal frequency but not by initial local diversity. Both final local richness and final local biomass showed a hump-shaped pattern with increasing dispersal frequency, with a maximum at intermediate dispersal frequencies. Consequently, final local biomass increased linearly with increasing final richness. We conclude that the general relationship between richness and ecosystem functioning remains valid in open systems, but the maintenance of ecosystem processes significantly depends on the effects of dispersal on species richness and local interactions.
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  • 44
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    In:  Plant Cell and Environment, 29 (5). pp. 810-822.
    Publication Date: 2019-09-23
    Description: Carbon acquisition was investigated in three marine bloom-forming dinoflagellates – Prorocentrum minimum, Heterocapsa triquetra and Ceratium lineatum. In vivo activities of extracellular and intracellular carbonic anhydrase (CA), photosynthetic O2 evolution, CO2 and HCO3– uptake rates were measured by membrane inlet mass spectrometry (MIMS) in cells acclimated to low pH (8.0) and high pH (8.5 or 9.1). A second approach used short-term 14C-disequilibrium incubations to estimate the carbon source utilized by the cells. All three species showed negligible extracellular CA (eCA) activity in cells acclimated to low pH and only slightly higher activity when acclimated to high pH. Intracellular CA (iCA) activity was present in all three species, but it increased only in P. minimum with increasing pH. Half-saturation concentrations (K1/2) for photosynthetic O2 evolution were low compared to ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) kinetics. Moreover, apparent affinities for inorganic carbon (Ci) increased with increasing pH in the acclimation, indicating the operation of an efficient CO2 concentration mechanism (CCM) in these dinoflagellates. Rates of CO2 uptake were comparably low and could not support the observed rates of photosynthesis. Consequently, rates of HCO3– uptake were high in the investigated species, contributing more than 80% of the photosynthetic carbon fixation. The affinity for HCO3– and maximum uptake rates increased under higher pH. The strong preference for HCO3– was also confirmed by the 14C-disequilibrium technique. Modes of carbon acquisition were consistent with the 13C-fractionation pattern observed and indicated a strong species-specific difference in leakage. These results suggest that photosynthesis in marine dinoflagellates is not limited by Ci even at high pH, which may occur during red tides in coastal waters.
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  • 45
    Publication Date: 2018-06-25
    Description: The two agar-producing red algae, Gracilaria chilensis C. J. Bird, McLachlan & E. C. Oliveira and Gracilaria conferta (Schousboe ex Montagne) Montagne, responded with hydrogen peroxide (H2O2) release when agar oligosaccharides were added to the medium. In G. conferta, a transient release was observed, followed by a refractory state of 6 h. This response was sensitive to chemical inhibitors of NADPH oxidase, protein kinases, protein phosphatases, and calcium translocation in the cell, whereas it was insensitive to inhibitors of metalloenzymes. Transmission electron microscopic observations of the H2O2-dependent formation of cerium peroxide from cerium chloride indicated oxygen activation at the plasma membrane of G. conferta. A putative system, consisting of a receptor specific to agar oligosaccharides and a plasma membrane-located NADPH oxidase, appears to be responsible for the release of H2O2 in G. conferta. Subcellular examination of G. chilensis showed that the H2O2 release was located in the cell wall. It was sensitive to inhibitors of metalloenzymes and flavoenzymes, and no refractory state was observed. The release was correlated with accumulation of an aldehyde in the algal medium, suggesting that an agar oligosaccharide oxidase is present in the apoplast of G. chilensis. The presence of this enzyme could also be demonstrated by polyacrylamide electrophoresis under nondenaturating conditions and proven to be variable. Cultivation of G. chilensis at 16 to 17°C resulted in significantly stronger expression of agar oligosaccharide oxidase than cultivation at 12°C, which indicates that the enzyme is used under conditions that generally favor microbial agar macerating activity.
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  • 46
    Publication Date: 2020-06-30
    Description: We investigated the effects of ircinin-1, a lipid compound (a C25 sesterterpene tetronic acid) isolated from marine sponges (Sarcotragus sp.), on the modulation of cell cycle and induction of apoptosis in SK-MEL-2 human skin cancer cells (mutant p53). Ircinin-1 treatment on SK-MEL-2 cells resulted in a dose-dependent inhibition of cell growth and induced apoptotic cell death. Flow cytometric analysis revealed that ircinin-1 resulted in G1 arrest in cell cycle progression which was associated with a marked decrease in the protein expression of D-type cyclins and their activating partners Cdk 4 and 6 with concomitant inductions of p21WAF1/CIP1 and p27KIP1. The induction of p21WAF1/CIP1 appears to be transcriptionally upregulated and is p53-independent. In addition, ircinin-1 suppressed the phosphorylation of pRb protein and increased the co-association of pRb or proliferating cell nuclear antigen (PCNA) with p21WAF1/CIP1 in these cells. Ircinin-1 treatment also resulted in induction of apoptosis as determined by morphological changes, DNA fragmentation, alternated ratio of Bax/Bcl-2, cleavages of poly(ADP-ribose) polymerase and PLC-γ1, and flow cytometric analysis. Ircinin-1 also induced cytochrome c release, cleavage activations of caspase-3 and -9, and upregulation of Fas and Fas-L. Even though the inhibitor of apoptosis protein (IAP) was expressed in ircinin-1-untreated or -treated SK-MEL-2 cells, only the level of cIAP-1, but not XIAP or cIAP-2, was decreased during ircinin-1-induced apoptosis at Western blot and RT-PCR studies. Taken together, these findings suggest that ircinin-1 has strong potential for development as an agent for prevention against skin cancer
    Type: Article , PeerReviewed
    Format: text
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