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  • American Association for the Advancement of Science (AAAS)  (388)
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  • 11
    Publication Date: 2011-03-26
    Description: Axon-dendrite polarization is crucial for neural network wiring and information processing in the brain. Polarization begins with the transformation of a single neurite into an axon and its subsequent rapid extension, which requires coordination of cellular energy status to allow for transport of building materials to support axon growth. We found that activation of the energy-sensing adenosine 5'-monophosphate (AMP)-activated protein kinase (AMPK) pathway suppressed axon initiation and neuronal polarization. Phosphorylation of the kinesin light chain of the Kif5 motor protein by AMPK disrupted the association of the motor with phosphatidylinositol 3-kinase (PI3K), preventing PI3K targeting to the axonal tip and inhibiting polarization and axon growth.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3325765/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3325765/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Amato, Stephen -- Liu, Xiuxin -- Zheng, Bin -- Cantley, Lewis -- Rakic, Pasko -- Man, Heng-Ye -- GM41890/GM/NIGMS NIH HHS/ -- GM56203/GM/NIGMS NIH HHS/ -- K99CA133245/CA/NCI NIH HHS/ -- MH07907/MH/NIMH NIH HHS/ -- R00 CA133245/CA/NCI NIH HHS/ -- R01 GM056203/GM/NIGMS NIH HHS/ -- R01 NS014841/NS/NINDS NIH HHS/ -- R01 NS014841-32/NS/NINDS NIH HHS/ -- New York, N.Y. -- Science. 2011 Apr 8;332(6026):247-51. doi: 10.1126/science.1201678. Epub 2011 Mar 24.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, Boston University, 5 Cummington Street, Boston, MA 02215, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21436401" target="_blank"〉PubMed〈/a〉
    Keywords: AMP-Activated Protein Kinases/*metabolism ; Aminoimidazole Carboxamide/analogs & derivatives/pharmacology ; Animals ; Axons/enzymology/*physiology/ultrastructure ; *Cell Polarity/drug effects ; Cells, Cultured ; Hippocampus/cytology/embryology ; Metformin/pharmacology ; Mice ; Microtubule-Associated Proteins/metabolism ; Neurons/cytology/drug effects/enzymology/*physiology ; Phosphatidylinositol 3-Kinase/*metabolism ; Phosphorylation ; Proto-Oncogene Proteins c-akt/metabolism ; Rats ; Recombinant Fusion Proteins/metabolism ; Ribonucleotides/pharmacology ; Signal Transduction ; Tissue Culture Techniques
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  • 12
    Publication Date: 2011-03-19
    Description: Decreased cardiac contractility is a central feature of systolic heart failure. Existing drugs increase cardiac contractility indirectly through signaling cascades but are limited by their mechanism-related adverse effects. To avoid these limitations, we previously developed omecamtiv mecarbil, a small-molecule, direct activator of cardiac myosin. Here, we show that it binds to the myosin catalytic domain and operates by an allosteric mechanism to increase the transition rate of myosin into the strongly actin-bound force-generating state. Paradoxically, it inhibits adenosine 5'-triphosphate turnover in the absence of actin, which suggests that it stabilizes an actin-bound conformation of myosin. In animal models, omecamtiv mecarbil increases cardiac function by increasing the duration of ejection without changing the rates of contraction. Cardiac myosin activation may provide a new therapeutic approach for systolic heart failure.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090309/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4090309/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Malik, Fady I -- Hartman, James J -- Elias, Kathleen A -- Morgan, Bradley P -- Rodriguez, Hector -- Brejc, Katjusa -- Anderson, Robert L -- Sueoka, Sandra H -- Lee, Kenneth H -- Finer, Jeffrey T -- Sakowicz, Roman -- Baliga, Ramesh -- Cox, David R -- Garard, Marc -- Godinez, Guillermo -- Kawas, Raja -- Kraynack, Erica -- Lenzi, David -- Lu, Pu Ping -- Muci, Alexander -- Niu, Congrong -- Qian, Xiangping -- Pierce, Daniel W -- Pokrovskii, Maria -- Suehiro, Ion -- Sylvester, Sheila -- Tochimoto, Todd -- Valdez, Corey -- Wang, Wenyue -- Katori, Tatsuo -- Kass, David A -- Shen, You-Tang -- Vatner, Stephen F -- Morgans, David J -- 1-R43-HL-66647-1/HL/NHLBI NIH HHS/ -- R01 HL106511/HL/NHLBI NIH HHS/ -- R43 HL066647/HL/NHLBI NIH HHS/ -- New York, N.Y. -- Science. 2011 Mar 18;331(6023):1439-43. doi: 10.1126/science.1200113.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Preclinical Research and Development, Cytokinetics, Inc., South San Francisco, CA 94080, USA. fmalik@cytokinetics.com〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21415352" target="_blank"〉PubMed〈/a〉
    Keywords: Actin Cytoskeleton/metabolism ; Actins/metabolism ; Adenosine Triphosphatases/metabolism ; Adenosine Triphosphate/metabolism ; Adrenergic beta-Agonists/pharmacology ; Allosteric Regulation ; Animals ; Binding Sites ; Calcium/metabolism ; Cardiac Myosins/chemistry/*metabolism ; Cardiac Output/drug effects ; Dogs ; Female ; Heart Failure, Systolic/*drug therapy/physiopathology ; Isoproterenol/pharmacology ; Male ; Myocardial Contraction/*drug effects ; Myocytes, Cardiac/*drug effects/physiology ; Phosphates/metabolism ; Protein Binding ; Protein Conformation ; Protein Isoforms/chemistry/metabolism ; Rats ; Rats, Sprague-Dawley ; Urea/*analogs & derivatives/chemistry/metabolism/pharmacology ; Ventricular Function, Left/drug effects
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  • 13
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2011-08-13
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Selosse, Marc-Andre -- Rousset, Francois -- New York, N.Y. -- Science. 2011 Aug 12;333(6044):828-9. doi: 10.1126/science.1210722.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Centre d'Ecologie Fonctionnelle et Evolutive (CEFE-CNRS), Montpellier, France. marc-andre.selosse@cefe.cnrs.fr〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21836002" target="_blank"〉PubMed〈/a〉
    Keywords: *Biological Evolution ; Glomeromycota/growth & development/*physiology ; Mycorrhizae/growth & development/*physiology ; Plant Physiological Phenomena ; Plant Roots/*microbiology/physiology ; Plants/*microbiology ; *Symbiosis
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  • 14
    Publication Date: 2011-07-09
    Description: When new learning occurs against the background of established prior knowledge, relevant new information can be assimilated into a schema and thereby expand the knowledge base. An animal model of this important component of memory consolidation reveals that systems memory consolidation can be very fast. In experiments with rats, we found that the hippocampal-dependent learning of new paired associates is associated with a striking up-regulation of immediate early genes in the prelimbic region of the medial prefrontal cortex, and that pharmacological interventions targeted at that area can prevent both new learning and the recall of remotely and even recently consolidated information. These findings challenge the concept of distinct fast (hippocampal) and slow (cortical) learning systems, and shed new light on the neural mechanisms of memory assimilation into schemas.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tse, Dorothy -- Takeuchi, Tomonori -- Kakeyama, Masaki -- Kajii, Yasushi -- Okuno, Hiroyuki -- Tohyama, Chiharu -- Bito, Haruhiko -- Morris, Richard G M -- G0700447/Medical Research Council/United Kingdom -- Medical Research Council/United Kingdom -- New York, N.Y. -- Science. 2011 Aug 12;333(6044):891-5. doi: 10.1126/science.1205274. Epub 2011 Jul 7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Centre for Cognitive and Neural Systems, University of Edinburgh, Edinburgh EH8 9JZ, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21737703" target="_blank"〉PubMed〈/a〉
    Keywords: 6-Cyano-7-nitroquinoxaline-2,3-dione/pharmacology ; Animals ; Cues ; Cytoskeletal Proteins/genetics ; Early Growth Response Protein 1/genetics ; *Genes, Immediate-Early ; Hippocampus/*physiology ; Learning ; Male ; *Memory ; *Mental Recall ; Neocortex/*physiology ; Nerve Tissue Proteins/genetics ; Prefrontal Cortex/*physiology ; Rats ; Receptors, AMPA/antagonists & inhibitors ; Receptors, N-Methyl-D-Aspartate/antagonists & inhibitors ; Synaptic Transmission/drug effects ; *Transcriptional Activation ; Up-Regulation
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  • 15
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2011-02-05
    Description: Once initiated near the soma, an action potential (AP) is thought to propagate autoregeneratively and distribute uniformly over axonal arbors. We challenge this classic view by showing that APs are subject to waveform modulation while they travel down axons. Using fluorescent patch-clamp pipettes, we recorded APs from axon branches of hippocampal CA3 pyramidal neurons ex vivo. The waveforms of axonal APs increased in width in response to the local application of glutamate and an adenosine A(1) receptor antagonist to the axon shafts, but not to other unrelated axon branches. Uncaging of calcium in periaxonal astrocytes caused AP broadening through ionotropic glutamate receptor activation. The broadened APs triggered larger calcium elevations in presynaptic boutons and facilitated synaptic transmission to postsynaptic neurons. This local AP modification may enable axonal computation through the geometry of axon wiring.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sasaki, Takuya -- Matsuki, Norio -- Ikegaya, Yuji -- New York, N.Y. -- Science. 2011 Feb 4;331(6017):599-601. doi: 10.1126/science.1197598.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Chemical Pharmacology, Graduate School of Pharmaceutical Sciences, University of Tokyo, Tokyo 113-0033, Japan.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21292979" target="_blank"〉PubMed〈/a〉
    Keywords: *Action Potentials/drug effects ; Adenosine/metabolism/pharmacology ; Adenosine A1 Receptor Antagonists/pharmacology ; Animals ; Astrocytes/metabolism ; Axons/drug effects/*physiology ; CA3 Region, Hippocampal/*cytology/physiology ; Calcium/metabolism ; Excitatory Postsynaptic Potentials ; Glutamic Acid/pharmacology ; In Vitro Techniques ; Patch-Clamp Techniques ; Potassium Channels/metabolism ; Presynaptic Terminals/physiology ; Pyramidal Cells/*physiology ; Rats ; Rats, Wistar ; Receptor, Adenosine A1/metabolism ; Receptors, AMPA/metabolism ; *Synaptic Transmission ; Xanthines/pharmacology ; gamma-Aminobutyric Acid/pharmacology
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  • 16
    Publication Date: 2011-06-04
    Description: Epistasis has substantial impacts on evolution, in particular, the rate of adaptation. We generated combinations of beneficial mutations that arose in a lineage during rapid adaptation of a bacterium whose growth depended on a newly introduced metabolic pathway. The proportional selective benefit for three of the four loci consistently decreased when they were introduced onto more fit backgrounds. These three alleles all reduced morphological defects caused by expression of the foreign pathway. A simple theoretical model segregating the apparent contribution of individual alleles to benefits and costs effectively predicted the interactions between them. These results provide the first evidence that patterns of epistasis may differ for within- and between-gene interactions during adaptation and that diminishing returns epistasis contributes to the consistent observation of decelerating fitness gains during adaptation.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3244271/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3244271/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Chou, Hsin-Hung -- Chiu, Hsuan-Chao -- Delaney, Nigel F -- Segre, Daniel -- Marx, Christopher J -- R01 GM078209/GM/NIGMS NIH HHS/ -- R01 GM078209-05/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2011 Jun 3;332(6034):1190-2. doi: 10.1126/science.1203799.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21636771" target="_blank"〉PubMed〈/a〉
    Keywords: *Adaptation, Physiological ; Alleles ; *Biological Evolution ; *Epistasis, Genetic ; Evolution, Molecular ; *Genes, Bacterial ; *Genetic Fitness ; Genome, Bacterial ; Glutathione/metabolism ; Metabolic Networks and Pathways/genetics ; Methylobacterium extorquens/cytology/*genetics/metabolism/physiology ; Models, Genetic ; *Mutation ; Selection, Genetic
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  • 17
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2011-08-13
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gadagkar, Raghavendra -- New York, N.Y. -- Science. 2011 Aug 12;333(6044):833-4. doi: 10.1126/science.1210420.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Centre for Ecological Sciences, Indian Institute of Science, Bangalore, 560012 India. ragh@ces.iisc.ernet.in〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21836006" target="_blank"〉PubMed〈/a〉
    Keywords: Altruism ; Animals ; *Behavior, Animal ; *Biological Evolution ; Female ; Genetic Fitness ; Microsatellite Repeats ; Nesting Behavior ; Reproduction ; Selection, Genetic ; *Social Behavior ; Wasps/genetics/*physiology
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  • 18
    Publication Date: 2011-08-20
    Description: The gain, loss, and modification of gene regulatory elements may underlie a substantial proportion of phenotypic changes on animal lineages. To investigate the gain of regulatory elements throughout vertebrate evolution, we identified genome-wide sets of putative regulatory regions for five vertebrates, including humans. These putative regulatory regions are conserved nonexonic elements (CNEEs), which are evolutionarily conserved yet do not overlap any coding or noncoding mature transcript. We then inferred the branch on which each CNEE came under selective constraint. Our analysis identified three extended periods in the evolution of gene regulatory elements. Early vertebrate evolution was characterized by regulatory gains near transcription factors and developmental genes, but this trend was replaced by innovations near extracellular signaling genes, and then innovations near posttranslational protein modifiers.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3511857/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3511857/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lowe, Craig B -- Kellis, Manolis -- Siepel, Adam -- Raney, Brian J -- Clamp, Michele -- Salama, Sofie R -- Kingsley, David M -- Lindblad-Toh, Kerstin -- Haussler, David -- 1U01-HG004695/HG/NHGRI NIH HHS/ -- 5P41-HG002371/HG/NHGRI NIH HHS/ -- P41 HG002371/HG/NHGRI NIH HHS/ -- P50 HG002568/HG/NHGRI NIH HHS/ -- P50-HG02568/HG/NHGRI NIH HHS/ -- R01 HG004037/HG/NHGRI NIH HHS/ -- R01-HG004037/HG/NHGRI NIH HHS/ -- U01 HG004695/HG/NHGRI NIH HHS/ -- U54 HG003067/HG/NHGRI NIH HHS/ -- U54-HG003067/HG/NHGRI NIH HHS/ -- Howard Hughes Medical Institute/ -- New York, N.Y. -- Science. 2011 Aug 19;333(6045):1019-24. doi: 10.1126/science.1202702.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Center for Biomolecular Science and Engineering, University of California, Santa Cruz, CA 95064, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21852499" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biological Evolution ; Cattle ; *Conserved Sequence ; DNA, Intergenic/genetics ; *Evolution, Molecular ; Gene Expression Regulation ; Genes, Developmental ; Genome ; Humans ; Markov Chains ; Mice ; Oryzias/genetics ; Phylogeny ; Protein Processing, Post-Translational/genetics ; *Regulatory Elements, Transcriptional ; *Regulatory Sequences, Nucleic Acid ; Selection, Genetic ; Sequence Alignment ; Smegmamorpha/genetics ; Transcription Factors/genetics ; Vertebrates/*genetics
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  • 19
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2011-05-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Northcutt, R Glenn -- New York, N.Y. -- Science. 2011 May 20;332(6032):926-7. doi: 10.1126/science.1206915.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Comparative Neurobiology, Scripps Institution of Oceanography and Department of Neurosciences, University of California, San Diego, La Jolla, CA 92093, USA. rgnorthcutt@ucsd.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21596983" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biological Evolution ; Brain/*anatomy & histology ; Cerebellum/anatomy & histology ; Cerebrum/anatomy & histology ; *Fossils ; Hair ; Mammals/*anatomy & histology ; Olfactory Bulb/anatomy & histology ; Olfactory Mucosa/anatomy & histology ; Organ Size ; Skull/anatomy & histology/radiography ; Tomography, X-Ray Computed
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  • 20
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2011-10-15
    Description: Diet changes are considered key events in human evolution. Most studies of early hominin diets focused on tooth size, shape, and craniomandibular morphology, as well as stone tools and butchered animal bones. However, in recent years, dental microwear and stable isotope analyses have hinted at unexpected diversity and complexity in early hominin diets. Some traditional ideas have held; others, such as an increasing reliance on hard-object feeding and a dichotomy between Australopithecus and Paranthropus, have been challenged. The first known evidence of C(4) plant (tropical grasses and sedges) and hard-object (e.g., seeds and nuts) consumption dates to millions of years after the appearance of the earliest probable hominins, and there are no consistent trends in diet change among these species through time.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ungar, Peter S -- Sponheimer, Matt -- New York, N.Y. -- Science. 2011 Oct 14;334(6053):190-3. doi: 10.1126/science.1207701.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Anthropology, University of Arkansas, Fayetteville, AR 72701, USA. pungar@uark.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/21998380" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Biological Evolution ; Carbon Isotopes/analysis ; Dental Enamel/chemistry ; Dentition ; *Diet ; Ecosystem ; Food ; *Fossils ; *Hominidae ; Jaw/anatomy & histology ; Skull/anatomy & histology ; Tooth/anatomy & histology ; Tooth Wear
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