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  • Articles  (32)
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  • X-ray diffraction  (15)
  • Springer  (32)
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  • American Physical Society
  • Blackwell Publishing Ltd
  • 2000-2004
  • 1995-1999  (32)
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  • Articles  (32)
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  • Springer  (32)
  • American Geophysical Union
  • American Institute of Physics (AIP)
  • American Physical Society
  • Blackwell Publishing Ltd
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  • 2000-2004
  • 1995-1999  (32)
  • 1965-1969
  • 1945-1949
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  • 1
    ISSN: 1572-8854
    Keywords: X-ray diffraction ; xanthenedione ; heterocyclic fused rings
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract Several 9-(2-R phenyl)xanthenediones have been synthesized and the x-ray diffraction structure for the 2-methylphenyl derivative (4b) has been determined. This compound crystallizes in the monoclinic system, space group P21/n, with a = 11.729 (3), b = 9.674 (3), c = 14.628 (4) Å, and β = 106.30°. It presents a partially hydrogenated xanthene system in distorted boat conformation for the heterocyclic central ring, and an almost ideal envelope conformation for the outer rings. The aromatic substituent at the ninth position is at 84° in angle with the xanthene system.
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  • 2
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    Journal of chemical crystallography 29 (1999), S. 1049-1052 
    ISSN: 1572-8854
    Keywords: poly(ester amide)s ; glycine ; glutaric acid ; model compound ; nylons ; X-ray diffraction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract The compound diethyl-3,9-diaza-4,8-dioxoundecanedioate (EtGGGEt) has crystallized in the space group P21 with cell parameters a = 8.267(2), b = 4.853(4), c = 20.361(6) Å, β = 97.96(2)°. The crystal structure has been solved by direct methods and refined using the full matrix least squares methodology. There is one molecule in the asymmetric unit, in spite of its symmetric constitution. The central part of the molecule, the glutaramide moiety, has a partial folded conformation (T $${\bar S}$$ TTST), which differs from the all trans conformation found in related moieties but with an even number of carbon atoms. The two flanking glycine residues have a different conformation one from each other; the first one adopts the standard conformation (ψ = −156.5°, ϕ = 73°), while the second one has an unusual conformation. In this glycine the oxygen atom has a big temperature factor and it is disordered in two positions. Both facts, conformation and disorder of the second glycine, seem to be due to improvement of contacts with neighboring molecules. The molecules are hydrogen bonded along the b axis, forming infinite rows with the same sense of orientation, so the crystal has a polar structure.
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  • 3
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    Journal of chemical crystallography 29 (1999), S. 891-899 
    ISSN: 1572-8854
    Keywords: cyclohexaphosphates ; organometallic compound ; crystal growth ; X-ray diffraction ; crystal structure
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract Three new cyclohexaphosphates with general formula M0.5((C6H5CH2)2NH2)5P6O18·H2O (M=Co, Cu, Cd) are reported. They crystallize with monoclinic unit-cells and are isotropic. We have determined their structure from the salt M=Co. This later exhibits the following unit-cell parameters: a = 22.739(5), b = 17.682(3), c = 18.342(3) Å, β = 91.22(1)°, Z = 4,P21/n, V = 7373 Å3, and Dx = 1.373 g cm−3. The atomic arrangement can be described as layers containing P6O18 ring anions and CoO6 octahedra spreading in the (101) planes and intercalated by the dibenzylammonium groups and the water molecules. Synthesis and characterization by X-ray diffraction, IR absorption, and TA are described.
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  • 4
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    Journal of polymer research 6 (1999), S. 51-58 
    ISSN: 1572-8935
    Keywords: Aromatic polyimides ; X-ray diffraction ; Molecular mechanics modeling ; Crystal unit cell ; Correlation length ; Paracrystalline distortion
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Abstract X-ray diffraction and molecular mechanics modeling have been used to investigate the structures of aromatic polyimides. The polyimides are synthesized by the reaction of 3,3′,4,4′-biphenyltetracarboxylic dianhydride (BPDA) and 2,2′-bis(trifluoromethyl)-4,4′-diaminobiphenyl (PFMB), 3,3′-dimethyl-4,4′-diaminobiphenyl or o-tolidine (OTOL) and 2,2′-dimethyl-4,4′-diaminobiphenyl (DMB). PFMB, OTOL and DMB contain the same biphenyl structure, but the pendent groups are different or are at different positions. In the present paper, we describe the effect of pendent groups on the crystal structure and the drawability for these polymers. The crystal structures are triclinic unit cell with a=17.49 Å, b=19.94 Å, c=20.43 Å, α=40.7°, β=74.5° and γ=79.4° for homopoly(BPDA-OTOL) and triclinic unit cell with a=16.46 Å, b=9.60 Å, c=40.6 Å, α=90°, β=46°, and γ=79.4° for homopoly(BPDA-DMB). The homopoly(BPDA-OTOL) fibers can be drawn into ×2. Higher draw ratio of homopoly(BPDA-OTOL) fibers were not obtained because of thermal degradation. The other two homopolymers can be drawn from ×2 upto ×10. The increasing draw ratios are accompanied with a decrease of paracrystalline distortion and an increase of correlation length as well as degree of orientation. These are probably due to the presence of more flexible polymer chains of homopoly(BPDA-PFMB) and homopoly(BPDA-DMB), which increase the perfection of polymer chain arrangements during drawing.
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  • 5
    ISSN: 1572-8935
    Keywords: Liquid side chain crystalline copolysiloxane polymers ; Microstructure ; X-ray diffraction ; Differential scanning calorimetry ; Solid state NMR
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Abstract This manuscript proposes a packing arrangement model for a co-mesogenic sidechain liquid crystalline copolysiloxane polymer copoly[4-allyloxy-benzoic acid [4′-2-(2-methoxyethoxy) ethoxy] biphenyl]-4-y1 ester-co-4-allyloxy-[(4-cyano)-4′-phenyl] carboxyl benzoate ester (copoly [(MS3BDBE2)-co-(MCN)]x/y depending on the relative molar composition of each mesogen. From the analysis of the thermal data, X-ray diffraction data, and solid state NMR spin-lattice relaxation (T1ρ H) data, we have found two side chain molecules in the mesophase layer coming from the same or a different polymer backbone. They are presumed to be mixed and form a bilayer smectic C mesophase at lower MCN concentrations as well as at higher MCN concentrations.
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  • 6
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    Physics and chemistry of minerals 26 (1999), S. 206-211 
    ISSN: 1432-2021
    Keywords: Key words Iron ; Fe ; Si alloy ; X-ray diffraction ; Equation of state ; Thermoelasticity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Abstract  We have carried out an in situ synchrotron X-ray diffraction study on iron and an iron-silicon alloy Fe0.91Si0.09 at simultaneously high pressure and temperature. Unit-cell volumes, measured up to 8.9 GPa and 773 K on the bcc phases of iron and Fe0.91Si0.09, are analyzed using the Birch-Murnaghan equation of state and thermal pressure approach of Anderson. Equation of state parameters on iron are found to be in agreement with results of previous studies. For both iron and Fe0.91Si0.09, thermal pressures show strong dependence on volume; the (∂KT/∂T)V values are considerably larger than those previously reported for other solids. The present results, in combination with our previous results on ɛ-FeSi, suggest a small dependency of the room-temperature bulk modulus upon the silicon content, less than 0.3 GPa for 1 wt.% silicon. We also find that substitution of silicon in iron would not appreciably change the thermoelastic properties of iron-rich Fe−Si alloys. If this behavior persists over large pressure and temperature ranges, the relative density contrast between iron and iron-rich Fe−Si alloys at conditions of the outer core of the Earth could be close to that measured at ambient conditions, i.e., 0.6% for 1 wt.% Si.
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  • 7
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    Physics and chemistry of minerals 26 (1999), S. 644-648 
    ISSN: 1432-2021
    Keywords: Key words MnO ; CdO ; rock-salt monoxides ; X-ray diffraction ; equation of state
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Abstract Room-temperature volume measurements up to 8.1 GPa reveal that rock-salt structured MnO and CdO have identical compressibility in the pressure range studied. In the plot of bulk modulus vs unit-cell volume, CdO plots well above the trend of the 3d transition metal monoxides, a behavior that deviates from empirical predictions of constant K 0 V 0. The present observations are in favor of our earlier suggestion that, for isostructural solids, the empirically predicted bulk modulus-volume relationship may be limited to their subsets that share the same valence electron character (i.e., s vs 3d vs 4d). For cations forming transition metal monoxides, variations of Pauling electronegativity with ionic radius show differences that are qualitatively similar to the observed trends of bulk modulus, suggesting that bond covalency differences may contribute to the different behaviors between the 3d and 4d transition metal monoxides.
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  • 8
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    European biophysics journal 28 (1999), S. 294-301 
    ISSN: 1432-1017
    Keywords: Key words Lipid polymorphism ; Cubic phases ; X-ray diffraction ; Dehydration stress ; Trehalose protective function
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Physics
    Notes: Abstract Trehalose is known to protect some organisms from various stresses due to drought and high temperature. To explore the molecular mechanism of the protective function, the mesomorphic properties of the monoolein-water system, dried in the presence of trehalose, were studied by X-ray diffraction. While, in pure water, two bicontinuous inverse cubic structures (the Pn3m and Ia3d phases) and a lamellar Lα phase exist as a function of concentration, only the Pn3m cubic phase has been detected in concentrated trehalose solutions or in trehalose glasses, even under extremely dry conditions. Depending on the sugar concentration, or after glass dehydration, the Pn3m cubic unit cell decreases to very low values, much below the smaller one observed in pure water. However, as no phase transitions occur, a simple osmotic mechanism can be excluded. An additional stabilization of the lipid phase, arising from interfacial free energy changes due to trehalose-water-lipid direct interactions, and large enough to affect the energetic balance between the Pn3m and the Ia3d cubic phases, evidently occurs. Moreover, no differences in the Pn3m cubic structure were observed when the sugar platelets convert to the glassy state; no apparent structural modifications that can be related to mechanical pressure exerted on the lipid phase have been detected.
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  • 9
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    Physics and chemistry of minerals 26 (1999), S. 257-263 
    ISSN: 1432-2021
    Keywords: Key words Acetamide ; DRIFT spectroscopy ; Intercalation ; Hydrogen bonding ; Kaolinite ; Raman spectroscopy ; X-ray diffraction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Abstract  Upon intercalation of both ordered (low defect) and disordered (high defect) kaolinites with acetamide, two types of interaction are observed. Firstly, hydrogen bonding between the NH2 groups of the acetamide with the siloxane oxygens is formed, as evidenced by the formation of two new bands at 3400 and 3509 cm–1. Secondly, the appearance of additional bands at ∼3600 cm–1 in both the infrared and Raman spectra of the acetamide intercalates is attributed to a second type of hydrogen bonding by the interaction of the C=O group and the inner surface hydroxyls. Changes in the intensity of the hydroxyl deformation modes in the 895 to 940 cm–1 region are attributed to the changes in the hydrogen bonding of the kaolinite surfaces. It is proposed that the hydrogen bonding between the adjacent kaolinite layers is replaced with hydrogen bonding between both kaolinite surfaces and the acetamide molecule. Changes in the molecular structure of acetamide are observed upon intercalation. The amide 1 band is lost and replaced with a well-defined NH2 deformation vibration. The loss of the amide 1 band is attributed the hydrogen bond formation between the amide hydrogens and the siloxane surface. The bands of the C=O group at 1680 and 1740 cm–1 become a single band at 1680 cm–1. The amide 2 band remains unchanged. The lack of intensity of the 1740 cm–1 band is attributed to the formation of hydrogen bonding between the inner surface hydroxyl groups and the carbonyl group.
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  • 10
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    Physics and chemistry of minerals 26 (1999), S. 406-414 
    ISSN: 1432-2021
    Keywords: Key words Lawsonite ; Equation of state ; X-ray diffraction ; High-pressure ; High-temperature
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Abstract  A pressure-volume-temperature data set has been obtained for lawsonite [CaAl2Si2O7(OH)2.H2O], using synchrotron X-ray diffraction and an externally heated diamond anvil cell. Unit-cell volumes were measured to 9.4 GPa and 767 K by angle dispersive X-ray diffraction using imaging plates. Phase changes were not observed within this pressure-temperature range, and lawsonite compressed almost isotropically at constant temperature. The P-V-T data have been analyzed using a Birch- Murnaghan equation of state and a linear equation of state expressed as β=–1/V0 (∂V/∂P) T . At room temperature, the derived equation of state parameters are: K 0=124.1 (18) GPa K'0 set to 4) and β–1=142.0(24) GPa, respectively. Our results are intermediate between previously reported measurements. The high-temperature data show that the incompressibility of lawsonite decreases with increasing temperature to ∼500 K and then increases above. Hence, the second order temperature derivative of the bulk modulus is taken into account in the equation of state; a fit of the volume data yields K 0=123.9(18) GPa, (∂K/∂T)P=–0.111(3) GPa K–1, (∂2 K/∂T 2)P=0.28(6) 10–3 GPa K–2, α0=3.1(2) 10–5 K–1, assuming K'0=4.
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  • 11
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    Physics and chemistry of minerals 26 (1999), S. 419-424 
    ISSN: 1432-2021
    Keywords: Key words Iron ; Fe-Si alloys ; X-ray diffraction ; Phase transformation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Abstract In situ X-ray diffraction experiments at high pressure were carried out up to 8.9 GPa and 1100 °C to study phase transformations of iron and two iron-silicon alloys Fe0.91Si0.09 and Fe0.83Si0.17. For iron, the transformation from the bcc phase to the fcc phase was observed at pressures 3.8–8.2 GPa and temperatures that are consistent with previous in situ X-ray diffraction studies. Reversal of the transformation of iron was found to be sensitive to temperature; hysteresis of the transformation increased from 25 °C at 3.8 GPa to 100 °C at 7.0 GPa, primarily because the bcc-fcc phase boundary has a negative Clayperon slope. In the binary system Fe-Si, the observations of the present study indicate that the ferrite (bcc phase)-stabilizing behavior of silicon persists at high pressures and that the maximum solubility of silicon in the fcc phase increases with increasing pressure: (1) the transformation from the bcc phase to the fcc phase was observed in Fe0.91Si0.09 at 6.0, 7.4 and 8.9 GPa and the temperatures measured at the onset of the transformations were 300 °C higher than those in iron at similar pressures, (2) the transformation rate in Fe0.91Si0.09 was extremely sluggish compared to that of iron, and (3) the bcc-fcc phase transformation was not observed in Fe0.91Si0.09 at 4.7 GPa up to 1000 °C and in Fe0.83Si0.17 at 8.2 GPa and 1100 °C.
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  • 12
    ISSN: 1432-2021
    Keywords: Key words Majorite garnet ; X-ray diffraction ; PVT observation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Geosciences , Physics
    Notes: Abstract The high-pressure and temperature equation of state of majorite solid solution, Mj0.8Py0.2, was determined up to 23 GPa and 773 K with energy-dispersive synchrotron X-ray diffraction at high pressure and high temperature using the single- and double-stage configurations of the multianvil apparatuses, MAX80 and 90. The X-ray diffraction data of the majorite sample were analyzed using the WPPD (whole-powder-pattern decomposition) method to obtain the lattice parameters. A least-squares fitting using the third-order Birch-Murnaghan equation of state yields the isothermal bulk modulus, K T0  = 156 GPa, its pressure derivative, K′ = 4.4(±0.3), and temperature derivative (∂K T /∂T) P = −1.9(±0.3)× 10−2 GPa/K, assuming that the thermal expansion coefficient is similar to that of pyrope-almandine solid solution.
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  • 13
    ISSN: 1573-6881
    Keywords: KATP-channel ; solubilization ; mitochondria ; bilayer lipid membrane ; reconstruction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Electrical properties and regulation of the mitochondrialATP-dependent potassium channel were studied. The channel protein wassolubilized from the mitochondrial membrane using an ethanol/water mixture.Reconstituted into a bilayer lipid membrane BLM), the protein formed aslightly voltage-dependent channel with a conductance of 10 pS in 100 mM KCl.Often, several channels worked simultaneously (clusters) when many channelswere incorporated into the BLM. The elementary channel and the clusters wereboth highly potassium selective. At concentrations of 1 to 10 μM, ATPfavors channel opening, while channels become closed at 1–3 mM ATP. GDP(0.5 mM) reactivated the ATP-closed channels without affecting the untreatedchannels. The sulfhydryl-reducing agent ditiothreitol increased the openprobability at concentrations of 1 to 3 mM, but damaged the selectivity ofthe channel.
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  • 14
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    Journal of bioenergetics and biomembranes 31 (1999), S. 399-406 
    ISSN: 1573-6881
    Keywords: Brown adipose tissue ; mitochondria ; uncoupling protein ; UCP1 ; transport ; nucleotide ; fatty acid
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract The lack of energy conservation in brown adipose tissue mitochondria when prepared byconventional methods was established in the 1960s and was correlated with the thermogenicfunction of the tissue. In order to observe energy conservation, two requirements had to bemet: the removal of the endogenous fatty acids and the addition of a purine nucleotide. Thesetwo factors have been the essential tools that led to the discovery of the energy dissipationpathway, the uncoupling protein UCP1. The activity is regulated by these two ligands. Purinenucleotides bind from the cytosolic side of the protein and inhibit transport. Fatty acids actas seconds messengers of noradrenaline and increase the proton conductance. This reviewpresents a historical perspective of the steps that led to the discovery of UCP1, its regulation,and our current view on its mechanism of transport.
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  • 15
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    Journal of bioenergetics and biomembranes 31 (1999), S. 447-455 
    ISSN: 1573-6881
    Keywords: Fatty acid ; uncoupling ; proton permeability ; adenine nucleotide translocase ; dicarboxylate carrier, glutamate/aspartate carrier ; permeability transition pore ; mitochondria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Nonesterified long-chain fatty acids have long been known as uncouplers of oxidativephosphorylation. They are efficient protonophores in the inner mitochondrial membrane but not so inartificial phospholipid membranes. In the un-ionized form, they undergo a rapid spontaneoustransbilayer movement (flip-flop). However, the transbilayer passage of the dissociated(anionic) form is hindered by the negatively charged hydrophilic carboxylic group. In theinner mitochondrial membrane, the transfer of fatty acid anions is mediated by the adeninenucleotide translocase, the dicarboxylate carrier, and the glutamate/aspartate carrier. As a result,the passage of protons and electric charges is a concerted effect of the spontaneous flip-flopof the undissociated (protonated) form in one direction and carrier-facilitated transfer of theionized (deprotonated) form in the other direction. In addition, fatty acids also promote openingof the mitochondrial permeability transition pore, presumably due to their interaction with oneof its constituents, the adenine nucleotide translocase, thus forming an additional route fordissipation of the proton gradient. Structural prerequisites for these proton-conductingmechanisms are (1) a weakly ionized carboxylic group and (2) a hydrocarbon chain of appropriatelength without substituents limiting its mobility and hydrophobicity.
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  • 16
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    Journal of bioenergetics and biomembranes 31 (1999), S. 327-334 
    ISSN: 1573-6881
    Keywords: Apoptosis ; redox ; mitochondria ; E h ; ROS ; ASK-1 ; thioredoxin
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract The regulatory role of cellular redox state during apoptosis is still controversial. Early redoxsignaling can transduce divergent upstream signals to mitochondria and initiate apoptosis. Onthe other hand, release of mitochondrial cytochrome c triggers generation of reactive oxygenspecies (ROS) and renders apoptotic cells much more oxidized. Although the sequential caspaseactivation does not have apparent redox-sensitive components, redox signaling provides aseparate pathway that is parallel with the caspase cascade. The function of theapoptosis-associated redox change is uncertain. It could provide positive feedback mechanisms, such asactivating mitochondrial permeability transition and apoptosis signaling kinase (ASK-1). Sinceapoptotic cells are designated to be quickly eliminated, the dramatic cellular oxidation couldbe involved in the final degradation of apoptotic bodies and even the termination of theproteolytic activity after phagocytosis.
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  • 17
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    Journal of bioenergetics and biomembranes 31 (1999), S. 347-366 
    ISSN: 1573-6881
    Keywords: Free radicals ; H2O2 ; complex I ; heart ; brain ; free-radical leak ; complex III ; mitochondria ; aging ; longevity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Studies in heart and nonsynaptic brain mitochondria from two mammals and three birds showthat complex I generates oxygen radicals in heart and nonsynaptic brain mitochondria in States4 and 3, whereas complex III does it only in heart mitochondria and only in State 4. Theincrease in oxygen consumption during the State 4 to 3 transition is not accompanied by aproportional increase in oxygen radical generation. This will protect mitochondria and tissuesduring bursts of activity. Comparisons between young and old rodents do not show a consistentpattern of variation in mitochondrial oxygen radical production during aging. However, allthe interspecies comparisons performed to date between different mammals, and betweenmammals and birds, agree that animals with high maximum longevities have low rates ofmitochondrial oxygen radical production, irrespective of the value of their basal specificmetabolic rate. The sites and mechanisms allowing this, the recently described low degree ofmembrane fatty acid unsaturation of longevous animals, and their relation to longevity andaging are discussed.
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  • 18
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    Journal of bioenergetics and biomembranes 31 (1999), S. 431-445 
    ISSN: 1573-6881
    Keywords: Uncoupling ; thermoregulation ; mitochondria ; ATP/ADP antiporter ; aspartate/glutamate antiporter ; uncoupling proteins 1, 2, 3 ; plant uncoupling protein
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Physiological aspects of uncoupling of oxidation and phosphorylation are reviewed in thecontext of involvement of mitochondrial anion carriers. It is assumed that the carriers facilitateelectrophoretic translation of fatty acid anion, RCOO-, from the inner to the outer leaflet ofthe mitochondrial membrane, whereas back movement of the protonated fatty acid, RCOOH,from the outer to the inner leaflet represents flip-flop of RCOOH via the phospholipid bilayerof the membrane. The RCOO- transport seems to be catalyzed by the ATP/ADP and aspartate/glutamate antiporters, dicarboxylate carrier, and uncoupling proteins (UCP1, UCP2, UCP3L,UCP3s, and plant UCP). The fatty acid uncoupling is shown to be involved in thethermoregulatory heat production in animals and plants exposed to cold, as well as in performance ofrespiratory functions other than ATP synthesis, i.e., formation of useful substances,decomposition of unwanted substances, and antioxidant defense. Moreover, partial uncoupling might takepart in optimization of the rate of ATP synthesis in aerobic cells.
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  • 19
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    Journal of bioenergetics and biomembranes 31 (1999), S. 517-524 
    ISSN: 1573-6881
    Keywords: Proton leak ; uncoupling proteins ; UCP1 ; UCP2 ; UCP3 ; BMCP1 ; thermogenesis ; sequence homology ; mitochondria ; respiration
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract An energetically significant leak of protons occurs across the mitochondrial inner membranesof eukaryotic cells. This seemingly wasteful proton leak accounts for at least 20% of thestandard metabolic rate of a rat. There is evidence that it makes a similar contribution tostandard metabolic rate in a lizard. Proton conductance of the mitochondrial inner membranecan be considered as having two components: a basal component present in all mitochondria,and an augmentative component, which may occur in tissues of mammals and perhaps ofsome other animals. The uncoupling protein of brown adipose tissue, UCP1, is a clear exampleof such an augmentative component. The newly discovered UCP1 homologs, UCP2, UCP3,and brain mitochondrial carrier protein 1 (BMCP1) may participate in the augmentativecomponent of proton leak. However, they do not appear to catalyze the basal leak, as this isobserved in mitochondria from cells which apparently lack these proteins. Whereas UCP1plays an important role in thermogenesis, the evidence that UCP2 and UCP3 do likewiseremains equivocal.
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  • 20
    ISSN: 1573-6881
    Keywords: Oxoglutarate carrier ; pyridoxal 5′-phosphate ; transport ; proteoliposomes ; mitochondria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract The effect of pyridoxal 5′-phosphate and some other lysine reagents on the purified,reconstituted mitochondrial oxoglutarate transport protein has been investigated. The inhibition ofoxoglutarate/oxoglutarate exchange by pyridoxal 5′-phosphate can be reversed by passing theproteoliposomes through a Sephadex column but the reduction of the Schiff's base by sodiumborohydride yielded an irreversible inactivation of the oxoglutarate carrier protein. Pyridoxal5′-phosphate, which caused a time- and concentration-dependent inactivation of oxoglutaratetransport with an IC50 of 0.5 mM, competed with the substrate for binding to the oxoglutaratecarrier (K i = 0.4 mM). Kinetic analysis of oxoglutarate transport inhibition by pyridoxal5′-phosphate indicated that modification of a single amino acid residue/carrier molecule wassufficient for complete inhibition of oxoglutarate transport. After reduction with sodiumborohydride [3H]pyridoxal 5′-phosphate bound covalently to the oxoglutarate carrier. Incubation ofthe proteoliposomes with oxoglutarate or L-malate protected the carrier against inactivationand no radioactivity was found associated with the carrier protein. In contrast, glutarate andsubstrates of other mitochondrial carrier proteins were unable to protect the carrier. Mersalyl,which is a known sulfhydryl reagent, also failed to protect the oxoglutarate carrier againstinhibition by pyridoxal 5′-phosphate. These results indicate that pyridoxal 5′-phosphateinteracts with the oxoglutarate carrier at a site(s) (i.e., a lysine residue(s) and/or the amino-terminalglycine residue) which is essential for substrate translocation and may be localized at or nearthe substrate-binding site.
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  • 21
    ISSN: 1573-6881
    Keywords: yeast ; mitochondria ; ATP synthase ; ATP17 gene ; subunit f ; orientation ; cross-linking
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Modified versions of subunit f were produced by mutagenesis of theATP17 gene of Saccharomyces cerevisiae. A version of subunit f devoid of thelast 28 amino acid residues including the unique transmembranous domaincomplemented the oxidative phosphorylation of the null mutant. However, atwo-fold decrease in the specific ATP synthase activity was measured andattributed to a decrease in the stability of the mutant ATP synthase complexas shown by the low oligomycin-sensitive ATPase activity at alkaline pH. Themodification or not by non-permeant maleimide reagents of cysteine residuesintroduced at the N and C termini of subunit f indicated aNin-Cout orientation. From the C terminus of subunit fit was possible to cross-link subunit 4 (also called subunit b), which isanother component of the F0 sector and which also displays a shorthydrophilic segment exposed to the intermembrane space.
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  • 22
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    Journal of bioenergetics and biomembranes 31 (1999), S. 95-104 
    ISSN: 1573-6881
    Keywords: F1-ATPase ; β-barrel domain ; mitochondria ; assembly ; yeast ; Saccharomyces cerevisiae
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract The crystal structure of mitochondrial F1-ATPase indicatesthat the α and β subunits fold into a structure defined by threedomains: the top β-barrel domain, the middle nucleotide-binding domain,and the C-terminal α-helix bundle domain (Abraham et al.1994); Bianchet et al., 1998). The β-barrel domains of theα and β subunits form a crown structure at the top ofF1, which was suggested to stabilize it (Abraham et al.1994). In this study. the role of the β-barrel domain in the α andβ subunits of the yeast Saccharomyces cerevisiae F1,with regard to its folding and assembly, was investigated. The β-barreldomains of yeast F1 α and β subunits were expressedindividually and together in Escherichia coli. When expressedseperately, the β-barrel domain of the β subunit formed a largeaggregate structure, while the domain of the α subunit waspredominately a monomer or dimer. However, coexpression of the β-barreldomain of α subunit domain. Furthermore, the two domains copurified incomplexes with the major portion of the complex found in a small molecularweight form. These results indicate that the β-barrel domain of theα and β subunits interact specifically with each other and thatthese interactions prevent the aggregation of the β-barrel domain of theβ subunit. These results mimic in vivo results and suggest thatthe interactions of the β-barrel domains may be critical during thefolding and assembly of F1.
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  • 23
    ISSN: 1573-6881
    Keywords: mitochondria ; promoter ; transcription regulation ; Sp1 ; repressor
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract To gain insight into the role of the general transcription factor,Sp1, in the expression of nuclear genes involved in mitochondrial biogenesis,we investigated Sp1 activation of the adenine nucleotide translocator 2,cytochrome c1, F1-ATPase β subunit, and themitochondria transcription factor (mtTFA) promoters transfected intoDrosophila cell lines. The numbers and organization of GC elementsvary in the four promoters, but the magnitude of activation by coexpressedhuman Sp1 was similar. A feature common to the four promoters is the presenceof multiple, proximal Sp1-activating elements that account for 50% ormore of the transcription activation by Sp1. The distribution and function ofindividual distal Sp1 elements is less defined and appear to be morepromoter-specific. Finally, data from transfected Drosophila cellsprovide the first direct proof for the involvement of Sp1 in the negativeregulation of the ANT2 promoter and as a possible participant in repressionof the β-subunit promoter. The role of Sp1 in both the positive andnegative regulation of OXPHOS promoters is unique.
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  • 24
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    Journal of bioenergetics and biomembranes 31 (1999), S. 105-117 
    ISSN: 1573-6881
    Keywords: mitochondria ; F0F1 ATPase ; ATP synthase ; ATP hydrolysis ; IF1 ; yeast ; regulation ; inactivation ; proton gradient ; detergent
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract The regulation of membrane-bound proton F0F1ATPase by the protonmotive force and nucleotides was studied in yeastmitochondria. Activation occurred in whole mitochondria and the ATPaseactivity was measured just after disrupting the membranes with Triton X-100.Deactivation occurred either in whole mitochondria uncoupled with FCCP, or indisrupted membranes. No effect of Triton X-100 on the ATPase was observed,except a slow reactivation observed only in the absence of MgADP. BothAMPPNP and ATP increased the ATPase deactivation rate, thus indicating thatoccupancy of nucleotidic sites by ATP is more decisive than catalyticturnover for this process. ADP was found to stimulate the energy-dependentATPase activation. ATPase deactivated at the same rate in uncoupled anddisrupted mitochondria. This suggests that deactivation is not controlled byrebinding of some soluble factor, like IF1, but rather by the conversion ofthe F1.IF1 complex into an inactive form.
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  • 25
    ISSN: 1573-6881
    Keywords: VDAC1 ; mitochondria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Previous in vitro studies indicated that mutation of bothK234 and K236 to arginine, glutamine, or glutamic acid impaired the abilityof the voltage-dependent anion channel (VDAC1) to insert into the outermembrane of the mitochondria (Smith et al. 1995). These same mutantswere expressed in a strain of Saccharomyces cerevisiae with adisruption in the VDAC1 gene. The mutant VDAC1 forms were found in themitochondria suggesting that they were correctly sorted to the outermembrane. However, only very small amounts of the mutants were inserted intothe mitochondrial membranes. Mitochondria isolated from the strains expressingthe mutants were capable of catalyzing the translocation of both wild-typeVDAC1 and pre-alcohol dehydrogenase III indicating that the translocationapparatus was functional. These results confirm the previously drawnconclusion that K234 and K236 are part of a membrane insertion motif. Thefailure of the mutant VDAC1 forms to insert did not cause VDAC1 precursors toaccumulate in the soluble cell cytoplasm or in the microsomal fraction. Theapparent lack of a “precursor pool” suggested that apost-transcriptional control mechanism might limit the amounts of VDAC1precursors in the cell. Such a control mechanism is consistent with theobservation that the amount of VDAC1 was very similar after epichromosomal(gene in a 2u plasmid controlled by a Gal1 promoter) and chromosomalexpression (endogenous gene controlled by the endogenous promoter).
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  • 26
    ISSN: 1573-6881
    Keywords: VDAC1 ; mitochondria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Point mutations at K234 and K236 in the yeast voltage-dependent anionchannel 1 (VDAC1) of the mitochondrial outer membrane have been shown tomarkedly impair the membrane insertion of this protein (Smith etal., 1995; Angeles et al., 1998). Mutants of this type wereexpressed in vivo in a strain of yeast with a disruption in theVDAC1 gene. Expression of the various VDAC1 forms was under the control of aGal1 promoter. Wild-type VDAC1 expression fully complemented the slow growthphenotype caused by the disruption. VDAC1 mutants in which K234 and K236 werereplaced by arginine, glutamate, or glutamine caused a more severe negativeeffect on growth. This effect appeared to be dominant since the mutant VDAC1forms suppressed growth in a yeast strain that retained its VDAC1 gene. Thisapparent dominant negative effect on growth did not seem to be specific forany stage of the cell cycle. However, the growth defect was not lethal as theaffected cells still could accumulate the vital stain, FUN1. Expression of amutant in which K234 had been replaced by glutamate had more serious negativegrowth effects than did a similar mutation at K236. Expression ofΔ71-116 VDAC1 complemented the VDAC1 disruption; however, expression ofthe same deletion mutant in which the lysines corresponding to K234 and K236were mutated to glutamate severely impaired growth. These results have shownthat a deficiency of lysine at positions 234 and 236 in VDAC1 causes anonlethal growth defect that is more severe than deletion of 45 amino acidsfrom VDAC1 or disruption of the VDAC1 gene. They also indicate that there is ahierarchy in the importance of these lysines with mutations at K234 being themore serious.
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  • 27
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    Journal of bioenergetics and biomembranes 31 (1999), S. 291-304 
    ISSN: 1573-6881
    Keywords: Cell death ; aging ; necrosis ; apoptosis ; mitochondria ; oxidative phosphorylation ; electron transport chain ; ATP synthase ; cytochrome c ; mitochondrial DNA ; reactive oxygen species (ROS)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Traditionally, mitochondria have been viewed as the “powerhouse” of the cell, i.e., the site of theoxidative phosphorylation machinery involved in ATP production. Consequently, much of theresearch conducted on mitochondria over the past 4 decades has focused on elucidating both thosemolecular events involved in ATP synthesis by oxidative phosphorylation and those involved inthe biogenesis of the oxidative phosphorylation machinery. While monumental achievements havebeen made, and continue to be made, in the study of these remarkable but extremely complexprocesses essential for the life of most animal cells, it has been only in recent years that a largebody of biological and biomedical scientists have come to recognize that mitochondria participatein other important processes. Two of these are cell death and aging which, not surprisingly, are relatedprocesses both involving, in part, the oxidative phosphorylation machinery. This new awareness hassparked a new and growing area of mitochondrial research, that has become of great interest to awide variety of scientists ranging from those involved in elucidating the role of mitochondria incell death and aging to those interested in either suppressing or facilitating these processes as itrelates to identifying new therapies or drugs for human disease. It is the purpose of this briefintroductory review to provide an overview of those mitochondrial events involved in the life anddeath of animal cells and to indicate how these events might relate to the human aging process.Much more is known, much remains controversial, and even more remains to be learned as indicatedin the excellent set of minireviews that follow.
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    Journal of bioenergetics and biomembranes 31 (1999), S. 551-557 
    ISSN: 1573-6881
    Keywords: Calcium uniporter inhibitors ; mitochondria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract The recent finding that the inhibition of Ca2+-stimulated respiration by ruthenium red is mainlydue to a binuclear ruthenium complex (Ru360) present in the commercial samples of the classicalinhibitor ruthenium red (Ying et. al., 1991), showed that this complex is the more potent andspecific inhibitor of the mitochondrial calcium uniporter. This work was aimed to provideinsights into the mechanism by which Ru360 and other ruthenium-related compounds inhibitscalcium uptake. Ruthenium red and a synthesized analog (Rrphen) were compared with Ru360.The inhibition by this binuclear complex was noncompetitive, with a K i of 9.89 nM. Thenumber of specific binding sites for Ru360 was 6.2 pmol/mg protein. Ruthenium red and Ru360were mutually exclusive inhibitors. Bound La3+ was not displaced by Ru360. Rrphen was theleast effective for inhibiting calcium uptake. The results support the notion of a specific bindingsite in the uniporter for the polycationic complexes and a negative charged region from thephospholipids in the membrane, closely associated with the uniporter inhibitor-binding site.
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  • 29
    ISSN: 1573-6881
    Keywords: Superoxide generation ; protonmotive force dependent ; protonophore ; proton leak ; heat production ; ROS cycle ; mitochondria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Based on our recent findings concerning the generating, partitioning, targeting, and functioningof superoxide in mitochondria, a hypothetical model involving a “reactive oxygen cycle” inthe respiratory chain has been proposed (Liu and Huang, 1991, 1996; Liu et al., 1996; Liu,1997, 1998) This model emphasizes that during State 4 respiration, an interaction between anelectron leak (a branch of electron transfer directly from the respiratory chain to form O•- 2,but not H2O) and a proton leak (a branch pathway which utilizes $$\Delta \mu _{{\text{H}}^{\text{ + }} } $$ to produce heat, butnot ATP) may take place in cooperation with the Q and proton cycles in mitochondria throughthe consumption of H+ by O•- 2 anions to form a protonated perhydroxyl radical, HO2, whichis directly permeable across the inner mitochondrial membrane and induces proton leakageand a decrease of $$\Delta \mu _{{\text{H}}^{\text{ + }} } $$ . O•- 2 generation in the mitochondrial respiratory chain and its cyclingacross the inner membrane may have the role of an endogenous protonophore in regulating andpartitioning energy transduction and heat production, as well as in pathogenesis of mitochondrialdiseases, aging, and apoptosis. The present article summarizes the supporting experimentalevidence obtained in this laboratory and presents a brief description of the theoretical basisof this model
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  • 30
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    Journal of superconductivity 12 (1999), S. 609-615 
    ISSN: 1572-9605
    Keywords: Nonisothermal decomposition ; freeze-dried powder ; Bi(Pb)-Sr(Ba)-Ca-Cu-O system ; X-ray diffraction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Electrical Engineering, Measurement and Control Technology , Physics
    Notes: Abstract Nitrate powder with cation composition Bi:Pb:Sr:Ba:Ca:Cu = 1.8:0.4:1.8:0.2:1.2:2.0 was obtained by spray-frozen, freeze-drying technique. Samples of the nitrate precursor powder were placed in a heated furnace (heating rate ∼100°C/min) and extracted in air when temperature of the powdered samples attained values of 439, 495, 550, 600, 640, 647, 717, 766, 814, and 850°C. Samples have been investigated by X-ray diffraction analysis. The obtained data allow us to propose and discuss phase formation and decomposition processes and reactions that occur in non-isothermal conditions at different temperatures during thermal decomposition of the nitrate powder.
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    Hyperfine interactions 122 (1999), S. 83-95 
    ISSN: 1572-9540
    Keywords: ultisols ; mollisols ; Fe-mineralogy ; X-ray diffraction ; Mössbauer spectroscopy ; lithological characteristics and pedological evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract Two Argentine soils featuring different characteristics and compositions (mollisols and ultisols) have been studied by Mössbauer spectroscopy and X-ray diffraction. The first type has a weakly developed profile with a solum thickness of 40 cm; the Fe oxyhydroxides are present in low concentrations in mixtures with other slightly weathered minerals (e.g., quartz, feldspars, 2 : 1 phyllosilicates, etc.). The second one is a typic kandihumult, which is a highly weathered red coloured, deep soil. The Fe oxyhydroxides are abundant, mixed mainly with kaolinite clay minerals. Analyses of iron mineralogy show hematite and goethite in both soils. Their ratio is low in the first case and high in the last case. Magnetite–maghemite are also present in both situations, but in the mollisol their content is much lower than in the ultisol. The mineralogy found is related to the different lithological characteristics and processes of pedological evolution on both soils.
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  • 32
    ISSN: 1572-9540
    Keywords: archaeometry ; Mössbauer spectroscopy ; X-ray diffraction ; clays ; early ceramics ; authentic kiln ; reducing firing
    Source: Springer Online Journal Archives 1860-2000
    Topics: Physics
    Notes: Abstract Material from field firing experiments using a 2,700-year old Formative kiln at Batán Grande, Peru, was studied by X-ray diffraction and Mössbauer spectroscopy. The experiments explore the technology involved in producing the gray and black reduced ware for which Cupisnique and other Formative ceramics are justly known. During firing, the iron-bearing compounds in clays undergo characteristic changes which depend on kiln temperature and atmosphere. These changes can be observed in the Mössbauer spectra. By comparing spectra of an appropriate clay fired in field experiments and in the laboratory with the spectra of ancient ceramics, a description of Formative firing techniques in a reducing environment is attempted.
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