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  • growth  (63)
  • gene expression  (49)
  • Eddies
  • Turbulence
  • Springer  (121)
  • Acoustical Society of America
  • American Meteorological Society
  • MDPI Publishing
  • Nature P. G.
  • 2000-2004  (121)
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  • 1
    ISSN: 1570-7458
    Keywords: butterfly ; Formicidae ; food ; growth ; mutualism ; myrmecophily ; parasitism
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Caterpillars of the lycaenid butterfly Maculinea rebeli Hirschke (Lepidoptera: Lycaenidae) live for 11–23 months as social parasites in Myrmica (Hymenoptera: Formicidae) red ant nests, a trait that is believed to have evolved from mutualistic myrmecophilous ancestry. Although Maculinea rebeli caterpillars harm Myrmica larvae, they simultaneously produce copious secretions which the adult worker ants imbibe, perhaps representing a vestige of the ancestral mutualism. We report the results of laboratory experiments designed to test alternative hypotheses: (i) Maculinea rebeli caterpillars provide a beneficial source of sugar in return for being tended by Myrmicaworkers; (ii) Maculinea rebeli harms its host by stressing the workers by competing for available sugar. Comparisons were made of Myrmica worker fitness after 90–450 days under all possible combinations of three experimental treatments: ± M. rebeli caterpillars, ± sucrose and ± ant brood. Caterpillars always reduced the survival of both ant workers and their larvae, even when sugar was not provided, suggesting that M. rebeli is wholly parasitic on all stages in its host colony. The results also confirmed the importance of sucrose in the diet of Myrmica, and showed that M. rebeli caterpillars which eat ant brood to supplement their normal trophallactic feeding by workers develop more quickly - but have the same survival and pupal weights – as caterpillars that are fed solely by worker ants.
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  • 2
    ISSN: 1572-879X
    Keywords: aluminum oxide ; hydroxyl groups ; rhodium ; growth ; scanning tunneling microscopy ; infrared spectroscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract In order to investigate how the presence of surface hydroxyl groups on oxide surfaces affects the interaction with the supported metal, we have modified a well-ordered alumina film on NiAl(110) by Al deposition and subsequent exposure to water. This procedure yields a hydroxylated alumina surface as revealed by infrared and high-resolution electron energy loss spectroscopy. By means of scanning tunneling microscopy, we have studied the growth of rhodium on the modified film at 300 K. Clear differences in the particle distribution and density are observed in comparison to the clean substrate. While, in the latter case, decoration of domain boundaries as typical defects of the oxide film governs the growth mode, a more isotropic island distribution and a drastically increased particle density is found on the hydroxylated surface. From infrared data, it can be deduced that the growth is connected with the consumption of the hydroxyl groups due to the interaction between the metal deposit and the hydroxylated areas. This finding is in line with photoemission results published earlier.
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  • 3
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    Small business economics 14 (2000), S. 195-210 
    ISSN: 1573-0913
    Keywords: growth ; manufacturing ; performance ; product innovation ; small firms
    Source: Springer Online Journal Archives 1860-2000
    Topics: Economics
    Notes: Abstract The paper considers the relative performance [along a number of parameters] of a sample of 228 small manufacturing firms categorised by level of innovation. Whilst innovators appear no more likely to have experienced some form of sales or employment growth, they are significantly more likely to have grown more. In other words, the innovators' growth rate distributions are highly negatively skewed. With regards to export intensities, profitability and productivity levels, the findings are less clear. On the whole, the results reported here are similar to those of other small firm studies, yet vary markedly from large firm equivalents; suggesting that the nature of the returns to innovation may be contingent, at least in part, upon firm size. Moreover, the high levels of variation in firm performance should caution us against proffering innovative imperatives. If we are to counsel firms to "innovate at all costs", we must be clear about, and clearly demonstrate, the nature of the returns they may reasonably expect and the processes through which these may be optimised.
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  • 4
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    Journal of population economics 13 (2000), S. 403-424 
    ISSN: 1432-1475
    Keywords: JEL classification: O41 ; F22 ; Key words: Altruism ; education ; growth ; convergence ; capital mobility
    Source: Springer Online Journal Archives 1860-2000
    Topics: Sociology , Economics
    Notes: Abstract. The aim of this paper is to discuss the process of regional convergence within the framework of an overlapping generations model in which the engine of growth is the accumulation of human capital. In particular, we consider different education funding systems and compare their performance in terms of growth rates and pace of convergence between two heterogeneous regions. The analysis suggests that the choice of a particular education system incorporates a possible trade-off between long run growth rate and short run convergence. In such choice, the initial capital stock and the extent of regional human capital discrepancy appear as central variables.
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  • 5
    ISSN: 1570-0267
    Keywords: cDNA ; PCR cDNA ; TaqMan Analysis ; gene expression ; Pearson's correlation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Comparative gene expression studies are often limited by low availability of tissue and poor quality of extractable mRNA. Collective PCR amplification of minute quantities of mRNA has great potential for overcoming these limitations. However, there remains significant concern about the effects of amplification on the absolute and relative abundance of individual mRNAs that could complicate subsequent gene expression studies. To address this problem, we systematically compared the relative abundance of many specific mRNAs from complex cDNA preparations (from tissue and cultured cells) both before and after amplification by PCR. Our results demonstrated that, as expected, the absolute abundance of different mRNAs in a cDNA library is altered in an unpredictable manner by PCR amplification. However, we found that the concentration ratios of specific mRNAs among different cDNA preparations were routinely well conserved after PCR amplification. Thus, for the purpose of comparative expression studies for specific mRNAs in two (or more) complex cDNAs, PCR-amplified cDNA is equally useful as unamplified cDNA. These results provide a rigorous experimental validation and offer a theoretical treatment to support the utility of PCR amplified cDNA for differential gene expression studies. We conclude that the inherent difficulties in performing differential screening studies such as gene chip and array analyses on limited amounts of biological materials can be overcome by a PCR amplification step without compromising data quality.
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  • 6
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    Ecological research 15 (2000), S. 101-106 
    ISSN: 1440-1703
    Keywords: comparative ecology ; growth ; marine fish ; patterns ; reproduction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: A number of strong regularities characterize certain very basic biological parameters in marine fishes. For example, the ovulated eggs of fish usually measure approximately 1 mm in diameter. The small, relatively uniform size of the eggs means that almost all fish larvae experience environmental variability at very similar scales, which itself establishes strong constraints for, and links between reproduction and recruitment. Additional constraints emerge from seawater being a poor medium for respiration, which establishes further linkages between growth and mortality. These constraints have produced strongly convergent features, and thence the patterns in reproduction and growth of marine fishes that are presented.
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  • 7
    ISSN: 1573-143X
    Keywords: body composition ; catfish (Mystus nemurus) ; feeding rate ; growth
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A 10 week experiment was conducted to determine theeffects of feeding rate on growth, feed utilizationand body composition of the tropical bagrid catfish,Mystus nemurus. Catfish fingerlings with anaverage initial body weight of 12 g were fed apractical diet (36.2% protein, 16.5 kJ/g diet) atrates of 1, 2, 2.5, 3, 3.5, 4 or 5% of their bodyweight (BW) per day in two equal meals. Watertemperature was approximately 29 °C throughoutthe experiment. Percent weight gain increased almostlinearly with increasing feeding rates up to 2.5%BW/day beyond which no significant (P 〉 0.05)improvement in weight gain was observed. The specificgrowth rate of catfish fed rations of 1% BW/day was0.72%/day and this increased significantly to anaverage of 1.39%/day for catfish fed 2.5% BW/day andbeyond. Feed utilization did not differ significantly(P 〉 0.05) between fish fed 1.0 to 2.5%BW/day but decreased when rations were increased to3.0% BW/day and above. Feed efficiency ratio was0.79 for catfish fed 1.0% BW/day compared to a ratioof 0.27 for fish fed at 5% BW/day. Catfish fed 1.0%BW/day had the lowest condition factor, hepato- andviscerosomatic indices, but the highest carcass tobody weight ratio. These fish also had lowerproportions of whole body dry matter, lipid andprotein, carcass dry matter and lipid, and visceraldry matter and lipid than fish in other groups. Therewere no significant differences in either conditionindices or relative body composition of fish fedrations of 2.0 to 5.0% BW/day. Based on the growth,feed efficiency and body composition data obtained, afeeding rate of 2.5% BW per day is recommended forM. nemurus fingerlings raised at 29 °C.
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  • 8
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    Aquaculture international 8 (2000), S. 531-542 
    ISSN: 1573-143X
    Keywords: feed intake ; growth ; protein utilisation ; proximate ; composition ; rainbow trout (Oncorhynchus mykiss)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Rainbow trout Oncorhynchus mykiss grew from 44 to 326 g in 96days when held at ∼12 °C. Fish were fed to satiation twice dailywith either high (L1: 30.8%, L2:31.4%) or lower-lipid feeds (C1: 18.8%,C2: 21.8%). Four feeding treatments were studied.Group C1C2 received feed C1 for 43 days(days 0–43) and C2 thereafter (days 44–96).Groups L1L2, L1C2 andC1L2 were subjected to dietary changes asindicated by the feed designations. After a short period of feedadaptation, fish ingested similar amounts of feed energy i.e., they ateless by weight of the lipid-rich (L) feeds. Feed lipid content did notaffect growth but fish fed L-feed had reduced feed conversion ratio(FCR) compared to fish fed C-feed (0.731 vs. 0.773) during days0–43 (P 〈 0.01). After 96 days,L1L2-fish were lower in body protein(15.8%) than the C1C2-fish (16.8%)(P 〈 0.01). L-feeds also tended to increase percentage lipidand reduce percentage whole body moisture and ash. A higher net proteinutilisation (NPU) was recorded in fish fed L-feeds (43.6%)compared to fish fed C-feeds (38.8%) in days 0–43(P 〈 0.05). This seemed to be the result of a lower proteinintake rather than a protein-sparing effect of feed lipid. Above athreshold value of approximately 6.5 mg protein eaten·g bodywtminus 1·day−1, NPU decreased.
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  • 9
    ISSN: 1573-143X
    Keywords: aggression ; Atlantic salmon (Salmo salar) ; dominance ; growth
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Aggression in groups of 0+ Atlantic salmon (Salmo salar) was monitoredat weekly intervals in two tanks containing 100 fish each. Three 1 + salmonparr were added to one of these. After 5 weeks, fish weights were measuredin both tanks and the conditions reversed. At ten weeks, weights of fish inboth tanks were measured again. In both populations, levels of aggressionamong the smaller fish were significantly lower and growth ratessignificantly higher when the large fish were present. Although the largefish attacked the small ones, the rate at which they did so was an order ofmagnitude lower that the rate at which small fish attacked each other in theabsence of larger conspecifics. This raises the possibility that levels ofaggression among farmed salmon might be reduced by the addition of a fewlarge conspecifics.
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  • 10
    ISSN: 1573-4919
    Keywords: myosin heavy chain ; gene expression ; hypertrophy ; dexamethasone ; promoter function
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Cardiac hypertrophy has been observed in newborn infants treated with dexamethasone (DEX). This study was undertaken to examine whether DEX-induced hypertrophy in newborn rats is associated with redistribution of cardiac myosin heavy chain (MHC) isoforms and if so, the effects involve transcriptional regulation. Newborn rats were injected with either DEX (1 mg/kg/day; s.c.) or equivalent volume normal saline for 1, 3, 5, 7 or 9 days. Hypertrophy was quantified by heart dry/wet wt ratios, heart/body wt ratios, and total protein content of the myocardium. Changes in the expression of cardiac MHC mRNA were characterized by northern blot and slot blot analyses, using isoform specific probes for a- and β-MHC genes. DEX effect on α-MHC gene transcription was analyzed by transiently transfecting various α-MHC promoter/CAT reporter constructs into primary cultures of cardiac myocytes derived from one day old rat pups. DEX administration into newborn rats produced significant cardiac hypertrophy ranging from 23% at day 1 to 59% at 9 days. The hypertrophy was accompanied by immediate increase (83%) in steady state level of the α-MHC mRNA within one day and a maximum increase (148%) at 7 days of treatment. The steady state level of β-MHC mRNA declined by 25% at day 1 and a maximum decrease of 54% at day 7 of DEX treatment. The changes in MHC mRNA were also reflected in their protein levels as determined by V1 and V3 isozyme analysis. DEX treatment of primary cultures of cardiomyocytes following transfection with a-MHC promoter/CAT reporter constructs resulted in increased CAT expression in a dose dependent manner. The minimum α-MHC gene sequences responding to DEX treatment were located between the -200 to -74-bp region of the gene, resulting in 2-fold and 6-fold activation of CAT reporter after 0.05 and 0.1 mM doses of DEX, respectively. Our data indicate that DEX induced cardiac hypertrophy in newborn rats is accompanied by increased expression of α-MHC and decreased expression of β-MHC. The α-MHC effects are mediated in part through transcriptional mechanisms.
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  • 11
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    Molecular and cellular biochemistry 212 (2000), S. 5-9 
    ISSN: 1573-4919
    Keywords: transcriptional regulation ; gene expression ; coactivator ; repressor
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract The CREB-CREM transcription factors are the main gene regulatory effectors of the cAMP signaling pathway. The investigations of this family of transcription factors had a profound impact on the understanding of signaling-induced gene transcription. Here we discuss some key aspects of the underlying biology, review transcriptional activation by CREB proteins through transcription cofactors and present novel insights into the context- and position-specific function of CREB on complex genes.
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  • 12
    ISSN: 1573-4919
    Keywords: AP-1 ; cobalt chloride ; gene expression ; heme oxygenase ; oxidative stress ; sodium arsenite
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Previously, chick heme oxygenase-1 (cHO-1) gene was cloned by us and two regions important for induction by sodium arsenite were identified. These two regions were found to contain consensus sequences of an AP-1 (-1580 to -1573) and a MRE/cMyc complex (-52 to -41). In the current study, the roles of these two elements in mediating the sodium arsenite or cobalt chloride dependent induction of cHO-1 were investigated further. DNA binding studies and site-directed mutagenesis studies indicated that both the AP-1 and MRE/cMyc elements are important for the sodium arsenite induction, while cobalt chloride induction involves only the AP-1 element. Electrophoretic mobility shift assays showed that nuclear proteins binding to the AP-1 element was increased by both sodium arsenite or cobalt chloride treatment, whereas the binding of proteins to the MRE/cMyc element showed a high basal expression in untreated cells and the binding activity was only slightly increased by sodium arsenite treatment. Site-directed mutagenesis studies showed that, to completely abolish sodium arsenite induction, both the AP-1 and MRE/cMyc elements must be mutated; mutation of either element alone resulted in only a partial effect. In contrast, a single mutation at AP-1 element was sufficient to reduce the cobalt chloride induction almost completely. The MRE/cMyc complex plays a major role in the basal level expression, and shares some similarities to the upstream stimulatory factor element (USF) identified in the promoter regions of mammalian HO-1 genes and other stress regulated genes. Because sodium arsenite is known to cause oxidative stress and because activation of AP-1 proteins has been shown to be a key step in the oxidative stress response pathway, we also explored the possibility that the induction of the cHO-1 gene by sodium arsenite is mediated through oxidative stress pathway(s) by activation of AP-1 proteins. We found that pretreatment with antioxidants (N-acetyl cysteine or quercetin) reduced the induction of the endogenous cHO-1 message or cHO-1 reporter construct activities induced by sodium arsenite or cobalt chloride. These antioxidants also reduced the protein binding activities to the AP-1 element in the electrophoretic mobility shift assays. In summary, induction of the cHO-1 gene by sodium arsenite or cobalt chloride is mediated by activation of the AP-1 element located at -1,573 to -1,580 of the 5′ UTR.
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  • 13
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    Molecular and cellular biochemistry 205 (2000), S. 1-11 
    ISSN: 1573-4919
    Keywords: kidney ; ischemia-reperfusion injury ; free radicals ; reactive oxygen species ; gene expression ; antioxidant enzymes
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Reactive oxygen species (ROS; O2-, H2O2, and OH·), normal by-products of cellular metabolic processes, are kept in control by antioxidant enzymes, such as catalase, glutathione peroxidase (GPX) and superoxide dismutases (SODs). To understand the role of antioxidant enzymatic defenses against ROS injury following ischemia-reperfusion, we examined the effect on kidney exposed to varying periods (30, 60 or 90 min) of ischemia followed by different periods of reperfusion. The enzymatic activities and protein levels of catalase, GPX, CuZnSOD and MnSOD were relatively unaffected at 30 min of ischemia followed by 0, 2 or 24 h reperfusion. However, 60 or 90 min of ischemia followed by 0, 2 or 24 h of reperfusion resulted in a decrease in activities and protein levels which paralleled the duration of ischemic injury. MnSOD activity tended to recover towards normal during reperfusion. Examination of the mRNA levels of these antioxidant enzymes demonstrated a severe decrease in mRNA levels of catalase and GPX at a time point of minimal ischemic injury (30 min of ischemia followed by reperfusion) suggesting that loss of mRNA of catalase and GPX may be the first markers of alterations in cellular redox in ischemia-reperfusion injury. Greater loss of mRNA for catalase, GPX and CuZnSOD were observed following longer periods (60 or 90 min) of ischemia. The mRNA for MnSOD was upregulated at all time points of ischemia-reperfusion injury. Actually, the greater decrease in mRNAs for catalase, GPX and CuZnSOD in the acute phase (within 24 h) subsequently showed a further decrease in these enzyme activities in the subacute phase (72 or 120 h after ischemia). These enzyme activities in the 30 min ischemia group, but not in the 90 min group, already showed tendencies for normalization at 120 h after ischemia. To understand the molecular basis of the loss of mRNA of these antioxidant enzymes during ischemia-reperfusion injury, we examined the rate of transcription by nuclear run-on assays. The similar rates of transcription in control and kidney exposed to ischemia-reperfusion indicates that the loss of mRNA for catalase, GPX and CuZnSOD are possibly due to the increased rate of turnover of their mRNAs. These studies suggest that expression of antioxidant genes during ischemia-reperfusion are not coordinately expressed and the differential loss of antioxidant enzymes may be the contributing factor(s) towards the heterogeneous renal tissue damage as a result of ischemia-reperfusion induced oxidative stress.
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  • 14
    ISSN: 1573-4919
    Keywords: prostaglandin ; cyclooxygenase ; transcriptional regulation ; gene expression ; promotor activation ; transcription ; endothelial cells
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Interleukin-1β (IL-1) is a potent inducer of cyclooxygenase-2 (COX-2) and prostaglandin biosynthesis in many types of cells, yet little is known about the molecular mechanisms regulating IL-1 mediated prostanoid biosynthesis in the endothelium of the microvasculature. Therefore, we examined the cis- and trans-acting factors regulating IL-1-induced COX-2 expression in the human microvascular endothelial cell line, HMEC-1. IL-1 enhanced steady state levels of COX-2 protein and mRNA synthesis by ≈ 2-fold which preceded a 2-fold increase in PGFα biosynthesis. Expression of a series of COX-2 promoter-luciferase constructs in IL-1 treated HMEC-1 cells revealed that the 'full length' (-1432/+59 bp) promoter was 10 times more active than the SV-40 promoter/enhancer and that it could be further activated by IL-1. Surprisingly however, all except for the shortest COX-2 promoter construct retained the ability to respond to IL-1 and luciferase activity driven by -191/+59 bp COX-2 promoter was as responsive to IL-1 as the full-length promoter. Moreover, site-directed promoter mutagenesis and electophoretic mobility shift assays (EMSA) indicate that the combinatorial actions of AP2, NF-IL6, and CRE elements are critical for both constitutive and IL-1-inducible COX-2 promoter activity. Understanding the mechanism(s) regulating COX-2 gene expression and prostaglandin biosynthesis in the microvasculature has important implications with regard to inflammation and angiogenesis in vivo.
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  • 15
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    Molecular and cellular biochemistry 203 (2000), S. 163-167 
    ISSN: 1573-4919
    Keywords: thymosin β-4 ; gene expression ; chloramphenicol acetyltransferase ; NIH3T3 cells ; interferon response
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Expression of the gene coding for thymosin β-4 (Tβ-4), the major G-actin sequestering peptide in the cell, is regulated mainly at the level of transcription. In this study, we examined the nucleotide sequence of the 5′-flanking region (from - 2202 to - 881) of the mouse Tβ-4 gene, and demonstrated that the DNA fragment from -278 to +410 of this gene was capable of directing the expression of a chloramphenicol acetyltransferase reporter gene in NIH3T3 cells. However, expression of the reporter gene in cells cannot be induced by interferon-a treatment even though a rapid activation of endogenous Tβ-4 gene by this cytokine was observed. These results suggest that the projected interferon-stimulated response element (ISRE) might reside in other parts of the mouse Tβ-4 gene.
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  • 16
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    Molecular and cellular biochemistry 211 (2000), S. 103-110 
    ISSN: 1573-4919
    Keywords: thioacetamide ; glutathione-S-transferase ; rat liver ; transcription ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract The effect of thioacetamide (TA), an hepatotoxic and hepatocarcinogenic compound, on the expression and activity of the cytosolic enzyme glutathione-S-transferase (GST) was studied in rat liver. Four h following the administration of 14C-labeled thioacetamide (10 mg/Kg), several subunits of GST were found to be radioactively labeled. A single sublethal dose of TA (250 mg/Kg) decreased by three-fold the expression of classα GST at 24-48 h of treatment, but did not significantly affect the transcription of class μ GST. The activity of the enzyme toward 1-chloro-2,4-dinitrobenzene was mildly inhibited (66% of the control) by a 24 h TA treatment and gradually increased thereafter. It is proposed that the covalent binding of TA or its derivative to the GST subunits does not affect the activity of the enzyme. Nevertheless, GST activity inhibition is due to the deleterious effect of TA on GST transcription.
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  • 17
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    Boundary layer meteorology 94 (2000), S. 461-493 
    ISSN: 1573-1472
    Keywords: Radiation fog ; Large-eddy simulation ; Turbulence ; Kelvin–Helmholtz instability ; Convection ; Mixed layer
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract In order to study the three-dimensional structure of radiation fogand to obtain a basic understanding of its generation mechanism,a numerical experiment is performed with a large-eddysimulation model and compared with the observation at Cabauw in the Netherlands. After confirming that the results are insatisfactory agreement with the observations, the structure of thefog and its generation mechanism are examined in more detail. Before the fog forms, the atmosphere is stable and an inversionlayer exists almost adjacent to the ground surface. As the fog grows, however, the stratification is destabilized and a mixed layerdevelops gradually. The longwave radiative cooling near thefog top contributes to the destabilization more than thecondensational heating does. The evolution of the fog can be classified into three stagesaccording to the behaviour of turbulent kinetic energy (TKE):formation, development, and dissipation stages.The fog layer has different flow structures at each stage.During the formation stage, longitudinal rolls similar tostreaks in channel flows appear near the ground surface.The development stage is characterized by an initiation oftransverse bands due to Kelvin–Helmholtz instability anda sudden increase of TKE. During the dissipation stage, longitudinalrolls and polygonal cells due to convective instability are organized.
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  • 18
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    Boundary layer meteorology 97 (2000), S. 219-249 
    ISSN: 1573-1472
    Keywords: Conditional concentration statistics ; Mixing ; Scalar dissipation ; Turbulence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract We analyse cross-wind-integrated statistics of theconcentration field of a conserved scalar for pointand line sources in grid turbulence. In particular,using wind-tunnel measurements we calculate thecross-wind integrated probability density function(pdf) for the scalar concentration. We then use thatquantity in the exact evolution equation for the pdfto calculate the cross-wind integrated mean of therate of dissipation of scalar variance, conditional onthe scalar concentration. Much of the variation ofthese statistics with distance downstream is accountedfor by scaling with concentration, length and timescales based on the development of the mean plume.This scaling thus suggests some simple practicalparameterisations of these statistics in terms ofmean-field quantities. One of the motivations for thiswork is to find a simple parameterisation for thescalar dissipation that can be used for modellingchemical reactions in plumes. We also consider the cross-wind integral of the firstfew moments of the concentration field and show thatthe integration greatly simplifies the budgets forthese moments. Thus the first moment is just thedownstream flux of the scalar, which is constant. Thesecond moment budget provides a check on the meandissipation estimated directly from the pdf evolutionequation.
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  • 19
    ISSN: 1573-1472
    Keywords: Katabatic flow ; Spectra ; Stable boundary layer ; Turbulence ; Waves
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract Observations obtained over a glacier surface in a predominantlykatabatic flow and with a distinctwind maximum below 13-m height are presented. The data werecollected using a 13-m high profilemast and two sonic anemometers (at about 2.5-m and 10-m heights).The spectra at frequencies belowthat of the turbulence range appear to deviate considerably fromthe curves obtained by Kaimal andco-workers during the 1968 Kansas experiment. The characteristicsof these deviations are compared tothe observations of others in surface-layers disturbed by anykind of large-scale outer-layer (orinactive) turbulence. In our case the disturbances arelikely to be induced by the highmountain ridges that surround the glacier. Moreover, the deviationsobserved in the cospectra seemto result from an, as yet, unspecified interaction between theinactive outer-layer turbulenceand the local surface-layer turbulence. Near the distinctwind maximum turbulence production ceasedwhile turbulence itself did not, probably the result ofturbulence transport from other levels. Consequently, we studied thelocal similarity relations using σw instead of u* as an alternative velocity scale. Wellbelow the wind maximum, and for relatively low stability(0〈 Rig 〈0.2), the flow behaves accordingto well established local-scaling similarity relationshipsin the stable boundary layer. For higherstability (Rig 〉 0.2), and near or above the wind maximum, the boundary-layer structure conforms tothat of z-less stratification suggesting that the eddy sizeis restricted by the local stability ofthe flow. In line with this we observed that the sensibleheat fluxes relate remarkably well to thelocal flow parameters.
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  • 20
    ISSN: 1573-1472
    Keywords: Coherent structures ; Numerical modelling ; Turbulence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract In two preceding papers, coherent structures of theatmospheric boundary layer (ABL), such as rollvortices or cells, were investigated through radar andaircraft observations collected during the TRAC-93(Turbulence Radar Aircraft Cells) experiment held inFrance in June 1993. The analysis of this experimentaldata set provided information on the spatialcharacteristics of these organisations (length scale,orientation, type ... ), their temporal and verticalevolution, and their relation with the dynamic andthermodynamic conditions of the ABL. For the thirdpaper in this series, a large eddy simulation model is used to examine the impact of thecoherent structures on the ABL vertical fluxes. Theanalysis of the simulated horizontal fields is madewith two-dimensional auto and cross-correlationsapplied on different pertinent ABL variables. Theresults emphasise a directional anisotropy of theseorganised fields throughout the ABL, much morepronounced in the heat flux fields, not only at thelength scale of organisations but also at theturbulence scales. This finding has an importantconsequence for traditional ABL flux measurementsbased on the hypothesis of isotropic and homogeneousturbulence. It can explain part of the underestimationof the surface fluxes often mentioned in theliterature. This approach makes it possible tomodify the concept of diffusion time (in chemicalmodelling) and could also lead to revised ABLparameterisations in Range Scale models.
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  • 21
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    Journal of chemical ecology 26 (2000), S. 2015-2023 
    ISSN: 1573-1561
    Keywords: Allelopathy ; growth ; phenolics ; Hebeloma ; Hymenoscyphus ; Picea abies ; Vaccinium myrtillus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Allelopathy due to humus phenolics is a cause of natural regeneration deficiency in subalpine Norway spruce (Picea abies) forests. If inhibition of spruce germination and seedling growth due to allelochemicals is generally accepted, in contrast there is a lack of knowledge about phenolic effects on mycorrhizal fungi. Thus, this work tested effects of a humic solution and its naturally occurring phenolics on the growth and respiration of two mycorrhizal fungi: Hymenoscyphus ericae (symbiont of Vaccinium myrtillus, the main allelochemical-producing plant) and Hebeloma crustuliniforme (symbiont of P. abies, the target plant). Growth and respiration of H. crustuliniforme were inhibited by growth medium with the original humic solution (−6% and −30%), respectively, whereas the same humic solution did not affect growth but decreased respiration of H. ericae (−55%). When naturally occurring phenolics (same chemicals and concentrations in the original humic solution) were added to the growth medium, growth of H. crustuliniforme was not affected, whereas that of H. ericae significantly increased (+10%). We conclude that H. ericae is better adapted to the allelopathic constraints of this forest soil than H. crustuliniforme and that the dominance of V. myrtillus among understory species could be explained in this way.
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  • 22
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    Molecular and cellular biochemistry 209 (2000), S. 125-129 
    ISSN: 1573-4919
    Keywords: apolipoprotein E ; apolipoprotein A-I ; gene expression ; transgenic mouse
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract The levels of plasma apolipoprotein (apo) E, an anti-atherogenic protein involved in mammalian cholesterol transport, were found to be 2-3 fold lower in mice over-expressing human apoA-I gene. ApoE is mainly associated with VLDL and HDL-size particles, but in mice the majority of the apoE is associated with the HDL particles. Over-expression of the human apoA-I in mice increases the levels of human apoA-I-rich HDL particles by displacing mouse apoA-I from HDL. This results in lowering of plasma levels of mouse apoA-I. Since plasma levels of apoE also decreased in the apoA-I transgenic mice, the mechanism of apoE lowering was investigated. Although plasma levels of apoE decreased by 2-3 fold, apoB levels remained unchanged. As expected, the plasma levels of human apoA-I were almost 5-fold higher in the apoAI-Tg mice compared to mouse apoA-I in WT mice. If the over-expression of human apoA-I caused displacement of apoE from the HDL, the levels of hepatic apoE mRNA should remain the same in WT and the apoAI-Tg mice. However, the measurements of apoE mRNA in the liver showed 3-fold decreases of apoE mRNA in apoAI-Tg mice as compared to WT mice, suggesting that the decreased apoE mRNA expression, but not the displacement of the apoE from HDL, resulted in the lowering of plasma apoE in apoAI-Tg mice. As expected, the levels of hepatic apoA-I mRNA (transgene) were 5-fold higher in the apoAI-Tg mice. ApoE synthesis measured in hepatocytes also showed lower synthesis of apoE in the apoAI-Tg mice. These studies suggest that the integration of human apoA-I transgene in mouse genome occurred at a site that affected apoE gene expression. Identification of this locus may provide further understanding of the apoE gene expression.
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  • 23
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    Molecular and cellular biochemistry 212 (2000), S. 29-34 
    ISSN: 1573-4919
    Keywords: cAMP ; transcription factor-decoy oligonucleotides ; CRE ; Ap-1 ; p53 ; tumor growth ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Nucleic acid molecules with high affinities for a target transcription factor can be introduced into cells as decoy cis-elements to bind these factors and alter gene expression. This review discusses a synthetic single-stranded palindromic oligonucleotide, which self-hybridizes to form a duplex/hairpin and competes with cAMP response element (CRE) enhancers for binding transcription factors. This oligonucleotide inhibits CRE- and Ap-1-directed gene transcription and promotes growth inhibition in vitro and in vivo in a broad spectrum of cancer cells, without adversely affecting normal cell growth. Evidence presented here suggests that the CRE-decoy oligonucleotide can provide a powerful new means of combating cancers, viral diseases, and other pathological conditions by regulating the expression of cAMP-responsive genes.
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  • 24
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    Molecular and cellular biochemistry 212 (2000), S. 73-79 
    ISSN: 1573-4919
    Keywords: adrenergic receptors ; renin-angiotensin system (RAS) ; gene expression ; kidney
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract To investigate the molecular mechanism(s) of action of catecholamines on the expression of the angiotensinogen (ANG) gene in kidney proximal tubular cells, we used opossum kidney (OK) cells with a fusion gene containing the 5′-flanking regulatory sequence of the rat ANG gene fused with a human growth hormone (hGH) gene as a reporter, pOGH (rANG N-1498/+18), permanently integrated into their genomes. The level of expression of the ANG-GH fusion gene was quantified by the amount of immunoreactive-hGH (IR-hGH) secreted into the medium. The addition of norepinephrine (NE), isoproterenol (a β1/β2-adrenergic receptor (AR) agonist) and iodoclonidine (an α2-AR agonist) stimulated the expression of the ANG-GH fusion gene in a dose-dependent manner, whereas the addition of epinephrine and phenylephrine (α1-AR agonist) had no effect. The stimulatory effect of NE was blocked by the presence of propranolol (β-AR blocker), atenolol (β1-AR blocker), yohimbine (α2-AR blocker), Rp-cAMP (an inhibitor of cAMP-dependent protein kinase AI & AII) and staurosporine (an inhibitor of protein kinase C), but was not blocked by ICI 118, 551 (β2-AR blocker) and prazosin (α1-AR blocker). The addition of a combination of isoproterenol and iodoclonidine or a combination of 8-Bromo-cAMP (8-Br-cAMP) and phorbol 12-myristate (PMA) synergistically stimulated the expression of the ANG-GH fusion gene as compared to the addition of isoproterenol, iodoclonidine, 8-Br-cAMP or PMA alone. Furthermore, the addition of NE, 8-Br-cAMP or PMA stimulated the expression of pOGH (rANG N-806/-779/-53/+18), a fusion gene containing the putative cAMP responsive element (CRE, ANG N-806/-779) upstream of the ANG promoter (ANG N-53/+18) in OK cells, but had no effect on the expression of fusion genes containing the mutant of the CRE. Gel mobility shift assays revealed that the ANG-CRE binds with the DNA-binding domain (bZIP 254-327) of the cAMP-responsive binding protein (CREB). The binding of the labeled ANG-CRE to CREB (bZIP254-327) was displaced by unlabeled ANG-CRE and the CRE of the somatostatin gene but not by the mutants of the ANG-CRE. Finally, NE stimulated the phosphorylation of CREB in OK cells. These studies demonstrate that the molecular mechanism(s) of NE action on the expression of the ANG gene in OK cells may be mediated via both the PKA and PKC signalling pathways and via the phosphorylation of CREB. The phosphorylated CREB then interacts with the CRE in the 5′-flanking region of the ANG gene and subsequently stimulates the gene expression.
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    Molecular and cellular biochemistry 212 (2000), S. 135-142 
    ISSN: 1573-4919
    Keywords: gene expression ; catecholamines ; angiotensin II ; heart failure ; myosin ; hypertension ; eprosartan
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Pressure overload of the heart is associated with a perturbed gene expression of the cardiomyocyte leading to an impaired pump function. The ensuing neuro-endocrine activation results in disordered influences of angiotensin II and catecholamines on gene expression. To assess whether angiotensin II type 1 receptor inhibition can also counteract a raised sympathetic nervous system activity, spontaneously hypertensive rats fed a hypercaloric diet were treated with eprosartan (daily 90 mg/kg body wt) and cardiovascular parameters were monitored with implanted radiotelemetry pressure transducers. Both, blood pressure and heart rate were increased (p 〈 0.05) by the hypercaloric diet. Although eprosartan reduced (p 〈 0.05) the raised systolic and diastolic blood pressure, the diet-induced rise in heart rate was blunted only partially. In addition to drugs interfering with the enhanced catecholamine influence, compounds should be considered that selectively affect cardiomyocyte gene expression via 'metabolic' signals.
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  • 26
    ISSN: 1573-4919
    Keywords: angiotensinogen ; fibronectin ; gene expression ; transcriptional regulation ; cardiomyocytes ; vascular smooth muscle cells
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Angiotensinogen (AGT) is a unique substrate of the renin-angiotensin system and fibronectin (FN) is an important component of the extracellular matrix. These play critical roles in the pathophysiological changes including cardiovascular remodeling and hypertrophy in response to hypertension. This study was performed to examine the regulation of AGT and FN gene in cardiac myocytes (CMs) and vascular smooth muscle cells (VSMCs) in response to mechanical stretch. Mechanical stretch significantly increased the AGT mRNA expression in CMs, while these stimuli did not affect FN mRNA levels. On the other hand, Mechanical stretch upregulated FN mRNA levels in VSMCs, whereas no increase in AGT mRNA levels was observed in response to stretch stimuli. An angiotensin II type 1 (AT1) receptor antagonist (CV11974) significantly decreased these stretch-mediated increases in mRNA level and promoter activity of the AGT and FN gene, whereas angiotensin II type 2 (AT2) receptor antagonist (PD123319) did not affect the induction. These results indicate that mechanical stretch activates transcription of the AGT and FN gene mainly via AT1 receptor-pathway in CMs and VSMCs. Furthermore, mechanisms regulating AGT and FN gene seem to be different between CMs and VSMCs.
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  • 27
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    Molecular and cellular biochemistry 212 (2000), S. 211-217 
    ISSN: 1573-4919
    Keywords: angiotensin receptor ; medullary thick ascending limb ; sodium intake ; primary cell culture ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract Angiotensin II (Ang II) is an important regulator of the function of medullary thick ascending limb of loop of Henle (MTAL). Recent studies showed that changes in Ang II receptor expression occur and underlie changes in the function of proximal tubules during altered sodium intake. The present experiment was designed to determine (1) whether expression of the type 1 Ang II (AT1) receptor in the MTAL is regulated by altered sodium intake, and (2) the specific pathway(s) mediating sodium-induced AT1 expression in the MTAL. Wistar rats were fed a normal sodium (0.5%, NS), low sodium (0.07%, LS), or high sodium (4%, HS) diet for 2 weeks. Northern blot analysis and radioligand binding showed that in rats fed a normal sodium diet the rank of order for both AT1 mRNA expression and receptor density was outer medulla 〉 cortex 〉 inner medulla. Sodium restriction significantly increased both AT1 mRNA expression and receptor density in the outer medulla. In contrast, neither AT1 mRNA expression nor receptor density in the outer medulla was altered by sodium loading. Losartan treatment (3 mg/kg/per day by oral gavage for 2 weeks) prevented low sodium-induced upregulation of the AT1 receptor in the outer medulla, but it had no effect on AT1 expression in the outer medulla of rats fed a normal sodium diet. Highly purified suspensions of MTAL were isolated from rats fed a normal or low sodium diet. Low sodium intake significantly increased AT1 mRNA level by 184% and AT1 receptor density by 58% in MTALs. Primary cultures of MTAL cells were treated with PBS, Ang II (10-8 M), and Ang II + 17 octadecynoic (17 ODYA, 10 μM). Ang II caused about 2-fold increase in AT1 mRNA levels, and this increase was diminished by about 30% by the addition of 17 ODYA. We conclude that (1) sodium restriction but not sodium loading increases AT1 receptor expression in the MTAL, (2) low sodium-induced upregulation of the AT1 receptor in the MTAL is Ang II-dependent, and (3) Ang II-induced upregulation of the AT1 receptor in the MTAL is mediated, at least in part, by cytochrome P450 pathways.
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  • 28
    ISSN: 1573-4919
    Keywords: renin angiotensin system ; sarcoplasmic reticulum ; Ca2+-handling ; gene expression ; ischemia-reperfusion ; cardioprotection
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract The aim of this study was to explore the possible participation of cardiac renin-angiotensin system (RAS) in the ischemia-reperfusion induced changes in heart function as well as Ca2+-handling activities and gene expression of cardiac sarcoplasmic reticulum (SR) proteins. The isolated rat hearts, treated for 10 min without and with 30 μM captopril or 100 μM losartan, were subjected to 30 min ischemia followed by reperfusion for 60 min and processed for the measurement of SR function and gene expression. Attenuated recovery of the left ventricular developed pressure (LVDP) upon reperfusion of the ischemic heart was accompanied by a marked reduction in SR Ca2+-pump ATPase, Ca2+-uptake and Ca2+-release activities. Northern blot analysis revealed that mRNA levels for SR Ca2+-handling proteins such as Ca2+-pump ATPase (SERCA2a), ryanodine receptor, calsequestrin and phospholamban were decreased in the ischemia-reperfused heart as compared with the non-ischemic control. Treatment with captopril improved the recovery of LVDP as well as SR Ca2+-pump ATPase and Ca2+-uptake activities in the postischemic hearts but had no effect on changes in Ca2+-release activity due to ischemic-reperfusion. Losartan neither affected the changes in contractile function nor modified alterations in SR Ca2+-handling activities. The ischemia-reperfusion induced decrease in mRNA levels for SR Ca2+-handling proteins were not affected by treatment with captopril or losartan. The results suggest that the improvement of cardiac function in the ischemic-reperfused heart by captopril is associated with the preservation of SR Ca2+-pump activities; however, it is unlikely that this action of captopril is mediated through the modification of cardiac RAS. Furthermore, cardiac RAS does not appear to contribute towards the ischemia-reperfusion induced changes in gene expression for SR Ca2+-handling proteins.
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  • 29
    ISSN: 1573-4919
    Keywords: pressure overload ; gene expression ; subcellular remodeling ; sarcoplasmic reticulum Ca2+-handling ; anti-hypertensive therapy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract The effects of propranolol and verapamil on contractile dysfunction, subcellular remodeling and changes in gene expression in cardiac hypertrophy due to pressure overload were examined. Rats were subjected to banding of the abdominal aorta and then treated with either propranolol (10 mg/kg daily), verapamil (5 mg/kg daily) or vehicle for 8 weeks after the surgery. Depression of the left ventricular function in the hypertrophied heart was associated with decreases in myofibrillar and myosin CA2+ ATPase activities as well as Ca2+-pump and Ca2+-release activities of the sarcoplasmic reticulum (SR). The level of a-myosin heavy chain (α-MHC) mRNA was decreased while that of β-MHC mRNA was increased in the pressure-overloaded heart. The level of SR Ca2+-pump ATPase (SERCA2) mRNA and protein content for SERCA2 were decreased in the pressure overloaded heart. Treatment of the hypertrophied animals with propranolol or verapamil resulted in preservation of the left ventricular function and prevention of the subcellular alterations. Shift in the α- and β-MHC mRNA levels and changes in the expression in SERCA2 mRNA level and protein content were also attenuated by these treatments. The results suggest that blockade of β-adrenoceptors or voltage-dependent calcium channels normalizes the cardiac gene expression, prevents subcellular remodeling and thus attenuates heart dysfunction in rats with cardiac hypertrophy. Furthermore, both cardiac β-adrenoceptors and L-type Ca2+-channels may be involved in the genesis of cardiac hypertrophy due to pressure overload.
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  • 30
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    Molecular and cellular biochemistry 213 (2000), S. 119-126 
    ISSN: 1573-4919
    Keywords: TIS11 ; an immediate early gene ; gene cloning ; gene expression ; gene organization ; promoter
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: Abstract The TIS11 gene is an immediate early gene that is induced rapidly and transiently by phorbol 12-myristate 13-acetate and various growth factors. To study transcriptional regulation of the gene, a genomic clone of rat TIS11 was isolated, and the organization of exon-intron structure and transcriptional initiation site were determined. The rat TIS11 gene consisted of 2 exons spanning approximately 2.5 kb. Several canonical sequences for binding of transcriptional factors were found in the 5′-flanking region. The 5.3 kb of the 5′-flanking region fused to a luciferase reporter gene showed promoter activity when introduced into rat pheochromocytoma PC12 cells. Analyses with serial 5′-deletion mutants suggested that the major positive regulatory region is located at the region of -241 to -76, and that the minimum promoter region is within the 76-bp upstream of the transcriptional initiation site. Gel mobility shift assays revealed that PC12 cell nuclear proteins specifically bind to the major positive regulatory region of the TIS11 gene. The identified nuclear protein components may act as the positive trans-acting factors in the basal expression of the TIS11 gene in PC12 cells.
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  • 31
    ISSN: 1871-4528
    Keywords: Solanum tuberosum L. ; plant development ; antioxidant genes ; gene expression
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary The expression of antioxidant genes has been analyzed in a potato plant and during tuber dormancy. Manganese superoxide dismutase (MnSOD), cytosolic copper and zinc superoide dismutase (Cu/ZnSOD), catalase class II, cytosolic ascorbate peroxidase (APX) and glutathione peroxidase (GPX) are expressed at the RNA level in all the contexts analyzed. By contrast, the expression of the iron superoxide dismutase (FeSOD) and plastidic Cu/ZnSOD seems to be limited to green tissues, as shown by northern blots and native gels. A complex DAB-peroxidase isozyme pattern (using diaminobenzidine as substrate) has been observed in different developmental contexts analyzed, but hardly observed in tubers. During tuber dormancy, MnSOD and cytosolic Cu/ZnSOD activity was relatively constant in both Désirée and Bintje varieties while catalase activity decreases. Moreover, tuber dormancy breakage did not involve significant changes in the activity of these enzymes. On the basis of these results, the possible link between active oxygen species (AOS) metabolism and dormancy is discussed.
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  • 32
    ISSN: 1871-4528
    Keywords: gene expression ; cDNA-AFLP ; RNA-fingerprinting ; organogenesis ; tuberisation ; dormancy ; sprouting ; cluster analysis ; metabolic pathways
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Summary Potato tuber life-cycle is composed of many individual developmental stages including tuber formation, tuber development, dormancy and sprouting. We have used cDNA-AFLP fingerprinting to analyse gene expression in 24 individual stages of development, over the period from stolon formation through sprouting. In addition to these developmental stages, different tissues were analysed to assess tissue specificity and various controls were incorporated to determine process specificity. In total around 18000 transcript derived cDNA fragments (TDFs) were visualised from which circa 2600 were included in a statistical analysis allowing general conclusions about gene expression during development. More than 200 process specific TDFs were isolated and sequenced throughout the potato tuber life-cycle. The sequence similarities of these TDFs to known genes give an insight into the kinds of processes occurring during tuberisation, dormancy and sprouting.
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  • 33
    ISSN: 1608-3237
    Keywords: poly-β-hydroxybutyric acid ; Yersinia pseudotuberculosis ; Listeria monocytogenes ; temperature ; growth
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A comparative investigation of the intracellular content of poly-β-hydroxybutyric acid showed that Yersinia pseudotuberculosis strains accumulated, on the average, lower amounts of this reserve substance than Listeria monocytogenes strains. The intracellular pool of poly-β-hydroxybutyric acid was responsible for the growth of the bacteria at low temperatures (4–6°C) in the absence of any exogenous carbon and energy source.
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  • 34
    ISSN: 1608-3407
    Keywords: Scenedesmus quadricauda ; growth ; cell size ; photosynthetic activity ; imazalil sulfate ; three-phase dose response
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Three-phase dose responses of biological systems of different levels of organization are often called “paradoxical” because the biological effects are clearly manifested under low- and high-intensity treatments, but are absent during moderate-strength treatments. In this work, we found anomalous changes in the cell number of a green alga Scenedesmus quadricauda (Turp.) Breb. grown in the presence of the fungicide imazalil sulfate. At low imazalil concentrations (2.5 × 10–9–2.5 × 10–6 M), the slow increase in the cell number as compared to an untreated culture was not related to cell death. As seen by the dynamics of the population structure and cell functional characteristics (photosynthesis, thermal stability of photosynthetic membranes, etc.), the decrease in the growth rate at low concentrations of imazalil (2–10 × 10–9 M) was due to a long-term arrest of cell division in a fraction of the cell population rather than to a decrease in the rate of division. The absence of a toxic effect or even a slight stimulation of culture growth at moderate concentrations (0.05–1.25 × 10–6 M) was due to the resumption of cell division after a temporal cessation. At these concentrations, imazalil induced cell stress and adaptive elevation of cell tolerance to the fungicide (acclimation). Cell death was observed only at a high fungicide content in the medium (6.25 × 10–6 and higher). Thus, the three-phase (bimodal) dose response corresponds to two regimes (steady-states) of cell functioning which differ in cell sensitivity to external stimuli. The low-sensitivity state, which is characteristic of cells that have experienced stress, is likely to be the state known as “hormesis.”
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  • 35
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    Journal of applied phycology 12 (2000), S. 185-189 
    ISSN: 1573-5176
    Keywords: blue-green alga ; cyanobacterium ; carbon dioxide ; culture ; growth ; Nostocflagelliforme ; rehydration, watering
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The terrestrial blue-green alga (cyanobacterium), Nostoc flagelliforme, was cultured in air at variouslevels of CO2, light and watering to see theireffects on its growth. The alga showed the highestrelative growth rate at the conditions of highCO2 (1500 ppm), high light regime (219–414μmol m-2s-1) and twice daily watering,but the lowest rate at the conditions of low light(58–114 μmol m-2s-1) and daily twicewatering. Increased watering had little effect ongrowth rate at 350 ppm CO2, but increased byabout 70% at 1500ppm CO2 under high lightconditions. It was concluded that enriched CO2could enhance the growth of N. flagelliformewhen sufficient light and water was supplied.
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    Aquatic ecology 34 (2000), S. 19-27 
    ISSN: 1573-5125
    Keywords: adaptation ; fitness ; food quality ; growth ; reproduction ; temporary ponds
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Temporary pond Daphnia flourish on relatively poor-quality food, suggesting adaptation to stringent temporary pond conditions. We conducted laboratory life history experiments on populations of Daphnia obtusa from a shaded woodland temporary pond (short hydroperiod, dystrophic) and an open farmland temporary pond (long hydroperiod, eutrophic), and compared a suite of physical/chemical conditions in the ponds to evaluate habitat conditions. We hypothesized that the shaded woodland pond population would be more fit in terms of life history variables for individuals (age and size at first reproduction, mean brood size, mean number of neonates) and populations (generation time, net reproductive rate R 0, and intrinsic reproductive rate r) given a standard, low-quality food (trout chow and yeast). Life history traits of woodland pond animals were mixed, relative to farm pond animals, and consistent with bet-hedging for an unpredictable habitat. Values of life history traits rivaled or exceeded those of other studies using phytoplankton as food, and were influenced by the pond water used for our study. Life histories clearly differ among local and regional temporary pond Daphnia obtusa populations, and should be valuable for examining the relative influences of local selection and metapopulation dynamics on population structure.
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  • 37
    ISSN: 1573-5176
    Keywords: desiccation ; growth ; growth model ; inorganic carbon ; nutrients ; photoperiod ; photosynthesis ; pigments ; Porphyra linearis ; PPF ; respiration ; temperature ; water velocity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effect of environmental parameters on the growthof Porphyra linearis gametophytes was examinedunder controlled conditions, and related to themultilinear regression growth model recently developedfor this seaweed under coastal conditions in theeastern Mediterranean. Growth chambers, a gradienttable, special culture devices and analytical methodswere combined for this culture study.The major factors significantly controlling thegrowth rate of the P. linearis gametophytein glass dishes were: photoperiod, temperature, agein culture, photosynthetic photon flux (PPF), salinityand water dynamics. Maximal growth occurred underdaylength of 12 h, medium temperature (15–20 °C), low PPF (70–140 μmol photon m-2s-1), ambient salinity (30–40 ppt), 1–3 h ofdaily air exposure, and water velocity of 4 cm s-1.Photosynthesis and respiration rates weredominantly affected by daylength and temperature,while the concentration of pigments was dominantlyaffected by PPF and temperature.These conditions correspond well to the optimalnatural growth environment of this local species andare in agreement with the optimum estimated throughthe recently developed outdoor mathematical growthmodel.
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  • 38
    ISSN: 1573-5125
    Keywords: crayfish ; Procambarus alleni ; growth ; Florida Everglades ; hydroperiod
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Environmental conditions influence crustacean growth by affecting molt intervals and incremental increases in length and weight. In the seasonally-flooded marl prairie wetlands of eastern Everglades National Park, U.S.A., hydropattern exerts considerable influence on aquatic primary productivity, and so may influence the availability of food resources for higher trophic levels. The seasonal hydroperiod has been drastically altered by anthropogenic factors, but the impacts on the aquatic community are not well known. We studied whether differences in growth of crayfish Procambarus alleni could be detected in habitats with different hydroperiods. We first described growth patterns based on incremental increases in length and weight of crayfish on a high protein diet in the laboratory. Regression analyses indicated that growth patterns in males and females were similar. Although the intermolt period increased with age, the proportional increases in length and weight were similar through successive molts. The relationship between length and weight of crayfish was best described by a power equation for allometric growth. We then compared growth curves for crayfish subpopulations from different areas of the marl prairie. In habitats with the longest hydroperiods, crayfish weight-at-size was not significantly different from that in laboratory crayfish on the high protein diet. However, weight gain per unit increase in length in short hydroperiod sites was significantly less than in long hydroperiod sites or in the laboratory. These results indicate that crayfish productivity may be associated with hydroperiod in these stressed wetlands, and this may contribute to observed source-sink population regulation.
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  • 39
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    Aquaculture international 8 (2000), S. 159-168 
    ISSN: 1573-143X
    Keywords: emersion ; growth ; Pecten maximus ; scallop spat ; survival ; transport
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Scallop spat production normally requires transfer between growthsystems. Simulated transport experiments were carried out in April, June,December and February to evaluate effects of transport time on greatscallop (Pecten maximus) spat growth and survival. The spat (1.7–1.8 mm in shell-height and 21–25 µg ash free dry weight [AFDW]) wereheld in moist coffee filters at a temperature of 10 °C for up to 24 h,before being replaced into sieves in rearing tanks at 15 °C. The studyshowed that by increasing air emersion time, survival and growthdecreased. No significant difference in the results between 0 and 4 h of airemersion was found, while the effects after 12 and 24 h differed betweenspat groups. Survival and growth rates showed seasonal differences. Meansurvival was 35–71% in April and 77–99% from June to February. In Junemean growth rates attained were 115–128 µm shell-height and 15–18µg AFDW per day compared with 49–69 µm and 3.8–7.0 µgper day for the other spat groups. Great scallop spat may survive atransfer time of 24 h, but transportation for longer than 12 h is notrecommended if subsequent high survival and growth rates are to beensured.
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    Aquaculture international 8 (2000), S. 207-225 
    ISSN: 1573-143X
    Keywords: growth ; mortality ; Pecten maximus ; suspended culture
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Growth and mortality of the king scallop, Pecten maximus, werecompared when grown in cages and by ear hanging in suspended culturein Fuengirola, Malaga, in southern Spain. Seed (juveniles) used in theexperiment was collected in September 1997 that had settled on collectorsin April-June, of that year. Culture in suspended cages began in January1998 when the seed measured 42.7 (3.3) mm shell height and ended inFebruary 1999. Significantly faster growth was found at a minimum culturedensity (16 scallops/cage) than at two other densities (24 and 36scallops/cage). Depth (1, 5 and 10 m from the bottom) influenced growth,poorest growth occurred closest to the bottom. Under optimum growingconditions, 16 scallops/cage suspended 10 m from the bottom, scallops grewto 10 cm shell length (legal size) by February 1999.In ear hanging culture, ropes were moored in April (51.3 (4.5) mm),June (58.2 (4.5) mm) and November 1998 (64.3 (4.9) mm).Initially, rapid shell growth was observed in all three cultures.Subsequently, the shells became covered with barnacles, Balanus sp.,that possibly caused total mortality of the April culture and led to highmortalities in the two other cultures.
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  • 41
    ISSN: 1573-143X
    Keywords: growth ; silver perch (Bidyanus bidyanus) ; size grading ; size variation
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    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract This study presents two experiments addressing growth and size variation in fingerling silver perch (Bidyanus bidyanus. In the first experiment, fish close to mean population size were raised either in the presence or absence of five larger fish for 60 days. Mean specific growth rate (SGR) and increases in the coefficient of variation and skewness were lower in the presence of larger fish, indicating a negative effect of large fish on the growth of smaller ones. In the second experiment, fingerlings were graded into groups smaller and larger than the median size of the population and raised in size-sorted groups of 60 large or small fish and mixed groups of 30 fish of each size category, for 60 days. There was no difference in mean SGR among groups, nor between the mixed group ad the weighted mean of the small and large groups. Biomass gain was higher in the mixed groups than in the weighted small-and-large groups, probably due to a slightly lower survival in the groups comprised of large fish. The fact that the effect of large fingerlings on the growth of smaller ones was evident in the first, but not the second, experiment may be attributed to higher size disparity between large and small fingerlings in the first experiment.
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  • 42
    ISSN: 1573-143X
    Keywords: 17 β-estradiol ; fish meal ; gonadal development ; growth ; Nile tilapia (Oreochromis niloticus) ; plant proteins
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract This study was conducted to evaluate theeffect of plant protein‐based diets on gonadaldevelopment and plasma 17 β-estradiol (E2) levelin female Nile tilapia Oreochromis niloticus.Fish with a mean body weight of 6.7 (0.1) g were fedfour different diets with the same digestible protein(DP) and digestible energy (DE) containing gradedlevels of a mixture of plant ingredients as partial ortotal replacement of fish meal protein for 20 weeks.The control diet (D0) was based on fish meal, twodiets containing 33% (D33) and 66% (D66) of plantprotein, and one diet containing only plant protein(D100). Fish were sampled at 12 and 20 weeks. Nosignificant differences were found in different stagesof oocyte development and plasma E2 levels betweentilapia fed diets D0 and D100 at 12 weeks. Eight weekslater tilapia fed diet D0 showed a higher (P 〈 0.05)level of E2 than the D100 group. This difference andthe reduced proportion of vitellogenic and matureoocytes demonstrated that diets containing only plantprotein are less efficient in terms of tilapia growthand consequently ovarian development.
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  • 43
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    Aquaculture international 8 (2000), S. 455-461 
    ISSN: 1573-143X
    Keywords: floating cages ; growth ; pink dentex (Dentex gibbosus) ; sparids (Dentex dentex, Sparus aurata, Spondyliosoma cantharus, Diplodus puntazzo)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 44
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    Aquaculture international 7 (2000), S. 369-382 
    ISSN: 1573-143X
    Keywords: growth ; haddock (Melanogrammus aeglefinus) ; larvae ; light intensity ; photperiod ; tank colour
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract In two separate experiments, haddock (Melanogrammus aeglefinus) larvae were raised under different photoperiods (24L : 0D or 15L : 9D), or different combinations of tank colour (black or white) and light intensity (1.1 μmol s−1 m−2 or 18 μmol s−1 m−2). Growth (0.8% day−1 in standard length; 2.9% day−1 in body area) and survival (2%) were not significantly different between photoperiod treatments after 35 days. Larval survival was greater in white versus black tanks after 41 days (2% versus l%, respectively). Growth of larvae was impaired in black tanks at low (1.1 μmol s−1 m−2) light intensity (0.8% day−1 in standard length and 2.2% day−1 in body area versus 1.1% day 21 in standard length and 3.1% day−1 in body area, for all other treatments). Transmission and reflection of light was low in black tanks at low incident light, and there was very little upwelling light. The resultant poor prey to background contrast probably resulted in larvae being unable to consume sufficient food to sustain a level of growth comparable to that in other treatments.
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  • 45
    ISSN: 1573-143X
    Keywords: bivalve ; fouling ; growth ; Newfoundland ; nursery ; sea scallop (Placopecten magellanicus) ; spat
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Hatchery-reared sea scallop (Placopecten magellanicus) spat weremonitored for growth and recovery in three experiments to determine themost suitable system for nursery culture. In Experiment I, four size classesof nursery-sized spat held at two depths from October to July exhibiteddeclining growth rates over the winter period and increased growth ratesin the spring. Overall, season, depth and initial size had a significantinfluence on the absolute and specific growth rates of scallops. Recovery,defined as number of scallops remaining after mortality and loss of spatthrough gear mesh, was influenced by season and initial size, but notdepth. Scallops in the 3.0 mm+ size class had higher growth rates andrecovery than those in the 1.4–1.6 mm, 1.7–1.9 mm and 2.0–2.9 mm sizeclasses. In Experiment II, two gear types containing similar size spat werecompared. Growth rates were significantly higher in 3.0 mm pearl nets thanin 3.0 mm collector bags, although recovery was similar between the twoequipment types. Experiment III, two stocking densities of nursery-sizedspat were compared in collector bags. Neither growth rate nor recoverywere significantly different for the two densities (2600 and 5200spat/collector bag) tested. Overall, these studies indicated that importantparameters for optimizing the growth and recovery of scallops in a farm-based nursery system include season, initial spat size, deployment depthand gear type.
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  • 46
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    Aquaculture international 8 (2000), S. 381-389 
    ISSN: 1573-143X
    Keywords: Arctic charr (Salvelinus alpinus) ; growth ; low temperature ; stocking density ; time restricted feeding,/kwd〉
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The effects of time restricted feeding, possibility of bottomfeeding and stocking density on the growth of Arctic charr(Salvelinus alpinus L.) were examined in fish held at lowtemperature (〈2 °C). Fish fed for a restricted time (1 h) hadsignificantly (p 〈 0.05) lower specific growth rate (0.15 vs0.32% per day) than those fed the same ration over an extendedtime period (12 h). Increasing stocking densities had a positive andsignificant effect (p 〈 0.05) on growth with SGR increasing from 0.27to 0.52% per day at 2–30 kg m-3. Fish withaccess to feed on the tank floor had a significantly higher (p 〈0.05) growth rate (0.3 vs 0.13% per day) than those without thepossibility to feed from the bottom. When fish were held underconditions without access to the bottom a doubling of the feed rationdid not result in a significant (p 〉 0.05) increase in growth rate(0.13 vs 0.12%percnt; per day).
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  • 47
    ISSN: 1573-5028
    Keywords: gene expression ; germination ; NADPH-cytochrome P450 reductase ; Pseudotsuga menziesii
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract NADH-cytochrome P450 is a key enzyme that transfers electrons from NADPH to the cytochrome P450 family of enzymes. To begin to determine the regulation of CPR gene expression and enzyme activity in Douglas-fir a full-length cDNA was isolated from a seedling λZAP cDNA library and the ORF was used to develop a synthetic CPR-peptide-based antiserum. Northern blot analysis indicated CPR expression was regulated both developmentally prior to seed maturation and during germination, and differentially in the cotyledons, radicle and megagametophyte of seed and seedling tissues. The CPR-peptide antiserum detected a single CPR in seed and seedling microsomes analyzed by western blot of two-dimensional SDS-polyacrylamide gels. In microsomal extracts from whole seeds and seedlings, the amount of CPR protein remained constant while NADPH:cytochrome c reductase activity increased during stratification, germination and early seedling development. In contrast to cotyledons and megagametophyte, the level of CPR protein detected in radicles was higher than expected when compared to the amount of CPR transcript.
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  • 48
    ISSN: 1573-5036
    Keywords: growth ; inflow ; magnesium ; potassium ; (Prunus)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The effects (and interaction) of two solution concentrations of Mg (50, 500, μM) and two of K (250, 4250 μM) on the growth of micropropagated plants of “F. 12/1” and “Colt” were investigated using a flowing solution culture system. Magnesium inflow and growth of “Colt” and “F. 12/1” were inhibited to a similar extent by an increased concentration of K in the nutrient solution. However, the consequences of this inhibition were different. Reduced inflow of Mg in “F. 12/1” caused Mg deficiency symptoms at high and low concentrations of K, whereas this only occurred with a combination of high K concentration and low Mg concentration in “Colt”. The distribution of dry matter within the plant was significant in determining susceptibility to Mg deficiency. Since “F. 12/1” has a smaller root:shoot ratio than Colt it is unable to sustain the same concentration of Mg in leaves as “Colt” irrespective of external K concentration. The molar ratio of K:Mg in soil solutions should remain 〈8.5:1 in order to ensure maximum growth of “F. 12/1” and “Colt”.
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  • 49
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    Plant and soil 219 (2000), S. 177-185 
    ISSN: 1573-5036
    Keywords: alfalfa ; growth ; Medicago sativa L. ; nitrogen
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    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The dynamics of biomass and N accumulation following defoliation of alfalfa and the application of N fertilization has rarely been studied under field conditions, particularly in the seeding year. Our objectives were to determine the effect of N fertilization on the dynamics of biomass and N accumulation during the first regrowth of alfalfa in the seeding year, and to determine if a model describing critical N concentration developed for established stands could be used in the seeding year. In two separate experiments conducted in 1992 and 1993, the biomass and N accumulation of alfalfa grown with three N rates (0, 40 and 80 kg N ha-1) were determined weekly. Maximum shoot growth was reached with 40 kg N ha-1 in 1992, and maximum shoot growth was not reached with the highest N fertilization rate in 1993. Nitrogen fixation, root N reserves and soil inorganic N uptake when no N was applied were, therefore, not sufficient to ensure non-limiting N conditions, particularly when growth rates were the highest between 14 to 21 d after defoliation. Nitrogen fertilization increased shoot biomass accumulation in the first 21 d of regrowth, biomass partitioning to the shoots and shoot and taproot N concentrations. The model parameters of critical N concentration developed by Lemaire et al. (1985) for established stands of alfalfa were not adequate in the seeding year. The N requirements per unit of shoot biomass produced are greater in the seeding year than on established stands, and this was attributed to a greater proportion of leaves in the seeding year.
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  • 50
    ISSN: 1573-5036
    Keywords: growth ; light intensity ; Phaseolus vulgaris L. ; phosphorus–zinc interaction ; photosynthesis ; yield ; zinc deficiency
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Two experiments were conducted in a factorial combination of three Zn levels (0, 10 and 40 mg Zn kg-1 soil) and two P levels (0 and 200 mg P kg-1 soil). Experiment 1 was carried out during winter in a heated glasshouse, and experiment 2 during summer under a rain shelter. Plants of dwarf bean (Phaseolus vulgaris L., cv. Borlotto nano) were grown in pots filled with sandy soil. In both experiments, leaf Zn concentration was reduced by the addition of P to plants grown at low Zn supply. However, leaf Zn concentration lower than the critical level was observed only during experiment 2, and the main effects of low Zn were reductions of internode length, light use efficiency and maximum photosynthetic rate. In plants with leaf Zn concentration lower than the critical level, saturating irradiance levels fell from ∼1000 μmol m-2 s-1 PPFD to ∼300–400 μmol m-2 s-1 PPFD. Reduction of net photosynthesis was observed from the beginning of flowering and led to decreased seed production.
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  • 51
    ISSN: 1573-5036
    Keywords: ammonium ; birch ; gene expression ; nia promoter ; nitrate ; nitrate reductase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract A 1535 bp promoter of the nitrate reductase gene (nia) from birch (Betula pendula) and a series of 5′ deletions were fused to the β-glucuronidase (GUS) gene and introduced into Nicotiana plumbaginifolia. In transgenic plants the NR promoter sequences directed strong GUS expression in the root epidermal hair cells, and in phloem cells of leaf and stem vascular tissue. The NR promoter confers also a significant stimulation of the GUS gene expression by nitrate. These findings might indicate that nitrate flow is one of the signals involved into tissue and cell specific expression of the NR promoter GUS fusions.
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  • 52
    ISSN: 1573-5036
    Keywords: AM fungi ; colonisation ; growth ; mineral nutrition ; red raspberry
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Growth, development and nutrient status of micropropagated Rubus idaeus cv. Glen Prosen in response to inoculation with nine species of arbuscular mycorrhizal (AM) fungi from three different genera was investigated. The nine species of AM fungi included, Glomus clarum, G. etunicatum, G. intraradices, Gigaspora rosea, Gi. gigantea, Gi. margarita, Scutellospora calospora, S. heterogama and S. persica. Plant responses to AM fungi varied from growth enhancement to growth depression. Depressive growth effects were specific to Gigaspora species. Furthermore, particular species of AM fungi had unique effects on the mineral status of the raspberry plants. Importance of isolate selection for inoculation of micropropagated raspberry plants is discussed.
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  • 53
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    Plant and soil 226 (2000), S. 219-225 
    ISSN: 1573-5036
    Keywords: arbuscular mycorrhizas ; gene expression ; Glomus mosseae ; nutrient transport processes ; plasma membrane H+-ATPases
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The activity of H+-ATPases of plant and fungi generates an electrochemical gradient of H+ across the cell plasma membrane that drives a number of secondary transport systems, including those responsible for the translocation of cations, anions, amino acids and sugars. During the last years, several studies have been aimed at elucidating the role of plasma membrane H+-ATPases in the nutrient exchange processes taking place between the plant and the fungus in arbuscular mycorrhizal (AM) symbiosis. This paper reviews present knowledge about plasma membrane H+-ATPases and experimental evidence supporting the involvement of H+-ATPases of both organisms in the bidirectional transport of nutrients between partners. Molecular strategies that will provide further information on the function and regulation of plasma membrane H+-ATPases in AM symbiosis are presented and discussed.
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  • 54
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    Plant growth regulation 32 (2000), S. 27-39 
    ISSN: 1573-5087
    Keywords: ethylene ; gene expression ; jasmonic acid ; reactive oxygen species ; salicylic acid ; ultraviolet-B radiation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Depletion of the stratospheric ozone layer is leadingto an increase in ultraviolet-B (UV-B: 280–320 nm)radiation reaching the earth's surface. This hasraised interest in the possible consequence ofincreased UV-B levels on plant growth and developmentand the mechanisms underlying these responses. Although the effects of UV-B are now wellcharacterised at the physiological level, little isknown about the cellular and molecular mechanismsinvolved. Recent studies have shown that UV-B affectsa number of important physiological processes, such asphotosynthesis, through effects on gene expression. In addition, induction of a number of defensemechanisms, such as production of UV-B screeningpigments, increase in antioxidant enzymes andinduction of pathogenesis-related proteins, are alsomediated at the level of gene expression. The signaltransduction pathways by which UV-B regulates geneexpression are at present poorly understood. Thestudies carried out to date have, however, indicateda pivotal role for reactive oxygen species as keysecond messengers acting up-stream of a number ofpathways involving the plant hormones salicylic acid,jasmonic acid and ethylene. The transduction pathwaysidentified to date and the role of intermediates inregulating tolerance to UV-B damage are discussed inthis review.
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  • 55
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    Plant growth regulation 32 (2000), S. 77-81 
    ISSN: 1573-5087
    Keywords: bioenergetics ; growth ; nutrition ; nutrient deficiency ; plant stress ; respiration ; root ; root:shoot ratio ; root respiration ; source-sink relationship ; stress ; stress physiology
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Root respiration of kohlrabi (Brassica oleraceavar. gongylodes) was measured non-destructivelyin vivo by infrared gas analysis of completeroot systems, using potted plants in sand culture andnutrient solutions, for six weeks under (a) nutrientsufficiency, (b) deficiency of all mineral nutrients,(c) potassium deficiency or (d) phosphorus deficiency.This was to study the adaptation to nutrient stress interms of changes in root growth, root respiration,assimilate allocation and energy requirement fornutrient uptake. Both deficiencies of phosphorus andpotassium increased the root:shoot-ratio. This wasattributed to the plants transferring a largerrelative proportion of assimilates to the roots thanto the shoots relative to nutrient-sufficient plants.Roots of nutrient-sufficient kohlrabi respired 1.7 or7.7 mg CO2 h−1 per g fresh or dry matter, respectively. However, potassiumdeficiency enhanced root respiration to 2.4 mgCO2 h−1 or 12.2 mg CO2 h−1 on a per g fresh or dry weight basis respectively. This originated from an additional2.6 mg glucose g−1 dry matter h−1 allocated to the roots and provided 50 Joule additional energy(150 versus 100 Joule g−1 dry matter h−1)which may become available for the proposedK+:H+ symporter for potassium uptake.
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  • 56
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    Plant growth regulation 31 (2000), S. 35-42 
    ISSN: 1573-5087
    Keywords: β-1,4-endoglucanase ; ethylene ; fruit ; gene expression ; polygalacturonase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract Fruitlet abscission during fruit development is due to the activation ofpre-differentiated abscission zones (AZs) located between twig andpedicel, and/or pedicel and pericarp. Major advances on biochemicaland molecular aspects are related to β-1,4-endoglucanase (EG) andpolygalacturonase (PG), two cell hydrolases involved in the cell walldisassemblement responsible for fruit shedding. AZ activation isaccompanied by an increase in activity and transcript accumulation ofone or both enzymes. Expression of PG genes specifically related toabscission has been found in tomato flower AZ. In peach, an EG genehighly expressed in leaf and fruitlet AZs has been isolated. AZactivation is preceded by an induction of ethylene biosynthesis,paralleled by a stimulation of ACO activity and transcript accumulation.Ethylene, besides a dramatic stimulation of PG and EG, up or downregulates several other abscission related genes. The specificexpression of genes encoding for ethylene receptors in the AZ wouldsupport the hypothesis that fruitlet AZ specificity may depend on theability of this region to sense ethylene.
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  • 57
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    Plant growth regulation 30 (2000), S. 163-170 
    ISSN: 1573-5087
    Keywords: ATPase ; bioenergetics ; Fragaria ananassa Duch ; growth ; ion transport ; photosynthesis ; proton transport ; respiration ; source-sink ; strawberry
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The biochemical, physiological and anatomical properties of strawberry (Fragaria ananassa Duch.) cv. 'Cambridge Favourite' stolons were studied during growth. ATPase activity was measured, in microsomal and plasma membrane fractions, along with chlorophyll determination, in-situ photosynthesis measurements and scanning electron microscopy (SEM) and X-ray microanalysis of stolon cross-sections. Potassium-stimulated ATPase activity and proton-pumping, both together indicating the presence of plasma membrane ATPase, was greatest in the stolon tip, the tissue with the fastest growth and respiratory activity. The enzyme activity and respiration gradient from the tip of the stolon to the base was concomitant with xylem development which was more differentiated in the base than in the tip. These cross-sections also showed 30% greater amounts of calcium and potassium of the cryo-preserved basal part relative to the stolon tip. This gradient existed independent of the presence of daughter plants. A hypothesis is presented which suggests that for the long-distance longitudinal transport of nutrients this gradient between stolon tip and base is likely to be involved in stolon growth.
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  • 58
    ISSN: 1573-5117
    Keywords: growth ; secondary production ; Cerastoderma edule ; stable isotope ratios ; microphytobenthos ; intertidal ; Marennes-Oléron Bay
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The contribution of natural food sources to the growth and secondary production of the suspension feeding bivalve Cerastoderma edule (L.) was estimated under field conditions in the Marennes-Oléron Bay (Atlantic coast, France). Monthly estimates of abundance, biomass and cockle growth were combined with seasonal analyses of δ13C and δ15N ratios of juvenile and adult cockles, together with their potential food sources [i.e. suspended particulate organic matter (POM), microphytobenthos, macroalgae and seagrass] sampled at mid-tide level in a muddy sandflat. Adult cockles grew mainly in spring, whereas juveniles grew in summer and autumn, following spat recruitment in early summer. Total annual production and elimination of cockles were estimated to be 32.5 and 34.7 g AFDW m−2 yr−1. Relative contributions of each year class to production were ca 40, 41, 11 and 6% for 0-group, 1-, 3- and 4-yr-old cockles in 1995, respectively. Quantitative assessment of proportions of food sources to the annual secondary production of cockles was obtained by using a simple carbon isotope-mixing model with microphytobenthos (δ13C = −16.0±0.6‰) and POM (δ13C = −22.2±1.1‰) as end-members. On average, more than 70% of the total annual cockle production originated from microphytobenthos, with a much higher contribution for the 0-group (88%) than for adult cockles (60%). The between-age difference was induced mainly by changes in the availability of food resources (benthic versus planktonic) during the non-synchronous growing seasons of juvenile and adult cockles.
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  • 59
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    Environmental biology of fishes 58 (2000), S. 439-446 
    ISSN: 1573-5133
    Keywords: competition ; substrate ; habitat preferences ; growth ; foraging efficiency
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The substrate preferences, growth rates and foraging efficiency of two small benthic fish species, juvenile burbot, Lota lota, and stone loach, Barbatula barbatula, were compared in combined outdoor mesocosm and indoor laboratory experiments. Both species preferred the same stony substrate when alone, but significant differences in habitat selection were found between the two species under food deprivation and competition conditions. In burbot, preference for the stony habitat was reinforced under food-deprivation conditions and became even stronger when a potential competitor, the stone loach, was present. In contrast, stone loach switched to the gravel substrate when either starving or in the presence of a heterospecific competitor. Growth rates and foraging efficiency of burbot were significantly highest in the stony substrate and decreased with finer substrates. In stone loach, neither growth rates nor foraging efficiency were significantly different among the different substrates. The results provide an example of habitat partitioning by means of different competition styles, with a stenoecious, dominant style of the burbot and an euryoecious, evasive style of stone loach allowing coexistence of two sympatric fish species by graded interactions at an individual level in the littoral zone of a large lake.
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  • 60
    ISSN: 1573-5117
    Keywords: activity patterns ; foraging behaviour ; growth ; oxygen content ; predation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Field and laboratory experiments were set up to obtain data on the reasons for different habitat selection of Enallagma cyathigerum and Platycnemis pennipes. (1) Rearing of larvae in two different ponds showed that while P. pennipes was not able to survive conditions of low oxygen content, 50% of the E. cyathigerum larvae survived. (2) In field predation experiments with sticklebacks and dragonflies as predators, we found that E. cyathigerum suffered highest predation by the fish. In P. pennipes, mortality was highest with Anax imperator. (3) Experiments regarding larval behaviour showed that E. cyathigerum was generally more active and had higher foraging success than P. pennipes. Both species reduced activity in the presence of fish, but E. cyathigerum did so to a minor extent. In contrast to P. pennipes, E. cyathigerum showed escaping behaviour. (4) In the laboratory, the growth of E. cyathigerum was faster than that of P. pennipes.
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  • 61
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    Hydrobiologia 438 (2000), S. 237-244 
    ISSN: 1573-5117
    Keywords: Sargochromis codringtonii ; growth ; reproduction ; Lake Kariba
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Age determination of Sargochromis codringtonii was undertaken using scalimetry. Marginal scale analysis, used for age validation, indicated that annulus formation occurred in October and November. The possible reasons for this are discussed. S. codringtonii is relatively long-lived, surviving up to 8 years. It is sexually dimorphic with males growing at a faster rate and attaining a larger size than females. It is suggested that the mouth brooding habits of the female fish is one possible reason for sexual dimorphism. A higher total mortality rate (Z) was recorded for females as compared to males. S. codringtonii reproduces throughout the year, but with a peak during the hot wet months. The right ovary is atrophied and the possible significance of this is discussed.
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  • 62
    ISSN: 1573-5117
    Keywords: Chironomus tentans ; culture ; toxicity testing ; growth ; emergence ; density
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The midge Chironomus tentans Fabricius is a commonly used freshwater invertebrate in sediment toxicity tests. Rigorous laboratory culturing techniques are needed to provide organisms of uniform quality and known age for use in testing and for the continuation of the culture itself. This study was conducted to determine the effect of initial culture stocking density on: (1) post-hatch (larval) dry weight, body length and head-capsule width at 10 and 20 days; (2) time to emergence; (3) number and sex of emergent adults; (4) number of larvae and pupae at test termination (day 42 post hatch); and (5) adult dry weight. Three egg stocking densities were used 690 (1.1 eggs cm−2), 1043 (1.7 eggs cm−2) and 1463 (2.4 eggs cm−2). Mean weight of larvae at 10 days in high density tanks (0.13 mg/organism) was significantly higher (P=0.003) than both the medium and low density tanks (0.10 and 0.09 mg/organism, respectively). No significant differences between the three stocking densities were observed for the body length or head-capsule width at either 10 or 20 days post-hatch. Although not statistically significant, larval dry weight decreased with increased stocking density at day 20. A significantly (P=0.02) greater number of females (173±28) emerged from the low stocking density compared to both the medium and high stocking densities (123±45 and 118±54, respectively). Peak adult emergence for the low and medium stocking densities occurred between days 22 and 25 post-hatch, whereas peak adult emergence occurred between days 30 and 33 for the high stocking density. Survival relative to the initial number of eggs stocked was significantly greater (P=0.007) in the low density treatment compared to that in either the medium or the high density treatments. Mean adult weight exhibited an inverse relationship with initial stocking densities. At test end, there was not a significant difference in the mean number of organisms surviving and emerging in the three density levels. The central tendency for number of organisms surviving for all three treatments was 504 organisms per tank (0.82 organisms cm−2). The results of this experiment suggest that an optimal egg stocking density of 1.0 egg cm−2 (∼600 eggs/tank) be used with the feeding rate identified. This would ensure uniform larvae at the appropriate developmental stage (2nd–3rd instar) needed for toxicological research/testing (e.g. 10 days post-hatch), as well as producing sufficient emergence of males and females for future culture establishment.
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  • 63
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    Environmental biology of fishes 59 (2000), S. 91-97 
    ISSN: 1573-5133
    Keywords: age ; growth ; reproduction ; mortality ; fish
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Atherina presbyter is a common fish off the Canary Islands. Age, growth, reproduction, and mortality of the species are studied based on sampling carried out from July 1995 to June 1996. The parameters of the total length–total weight relationship are: a=0.004521, and b=3.0771. Otoliths age readings indicate that the sampled population consists of four age groups (0–III years). The von Bertalanffy growth parameters for all individuals are: L∞=122 mm total length, k=0.79 year−1, and t0=−0.21 years. Individuals grow quickly in their immature first year, attaining approximately 60% of their maximum length. After the first year, the annual growth rate drops rapidly, because the energy is probably diverted to reproduction. It is a gonochoristic species with no evidence of sexual dimorphism. The gonad is present as a single diffuse testis in males and as a single discrete ovary in females. The overall ratio of males to females is not significantly different from 1:1. The reproductive period of the species is protacted (February to June). The peak of the reproductive effort occurs in April–May. The size at first maturity is 68 mm. The population is being heavily exploited.
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  • 64
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    Environmental biology of fishes 59 (2000), S. 199-209 
    ISSN: 1573-5133
    Keywords: fish behavior ; schooling ; size disparity ; density ; growth ; food availability
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Group membership can confer both advantages and disadvantages to growth in juvenile fishes. The balance between costs and benefits of social interactions can shift depending on such factors as the composition of the group (density and size disparity) and the availability of food. We examined the effect of these factors on absolute growth and growth depensation in juvenile sablefish, Anoplopoma fimbria. Increasing density and increasing size disparity had little influence on absolute growth rates of juvenile sablefish and the effects of these social factors were not modified by ration level. In experiments testing density effects, absolute growth did not differ among groups of 1, 3, or 10 fish held at high rations, but at low rations single fish exhibited a different pattern of size-dependent growth compared to fish in groups. In experiments testing disparity effects, absolute growth did not differ between groups with an even size distribution and groups with a mixed size distribution. The relative size of an individual within a group, i.e., small, medium, or large, also did not modify growth, despite evidence of higher chasing behavior in mixed size distributions. Although the growth of small fish was not diminished in the presence of large fish, negative impacts of size disparity were expressed in high levels of cannibalism, which occurred in 42% of groups with a mixed size distribution. Significant growth depensation over time occurred in the density experiment, but not in the size disparity experiment, possibly due to the shorter duration of the latter experiment. We suggest that growth depensation was generated by individual variability in growth capacity rather than social effects on growth rates. Schooling behavior, measured by group cohesion indices, increased with fish size and was higher in groups with an even vs. a mixed size distribution. These results for sablefish are consistent with other schooling species in which growth variability is determined by exploitative competition and/or genetic variability in growth capacity rather than interference competition.
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  • 65
    ISSN: 1573-5141
    Keywords: behavior ; grass shrimp ; growth ; longevity ; mummichog ; neurotransmitter ; predator ; prey ; serotonin ; top-down
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Behavior can demonstrate linkages ofcontaminant effects at different levels oforganization from the biochemical/cellular to theorganism, population, and community levels.Mummichogs, Fundulus heteroclitus, from acontaminated area were previously found to havereduced condition, growth, and longevity, comparedwith conspecifics from clean sites. Thispopulation-level observation may be due to theirimpaired predator/prey behavior, which is associatedwith altered levels of serotonin in their brains. Theyare slow, less able to capture live food, and eat muchnon-nutritious detritus, which may contribute to theirdecreased growth and condition. They are also lessable to avoid being captured by blue crabs, which canalso contribute to their reduced life span andsize-structure. Grass shrimp, Palaemonetespugio, a major prey species, are not behaviorallyimpaired at this polluted site, but are more numerousand larger in size than at the reference site,probably due to reduced mummichog predation.
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  • 66
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    Fish physiology and biochemistry 22 (2000), S. 297-302 
    ISSN: 1573-5168
    Keywords: Carnitine ; diet ; growth ; hybrid striped bass ; lipid ; Morone ; nutrition
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A study was undertaken to investigate the effects of graded dietary levels and different types of carnitine on hybrid striped bass (Morone chrysops ♀ × M. saxatilis ♂ %) fed different levels of lipid. An incomplete factorial design was utilized in which diets containing lipid at either 5 or 10% were supplemented with l-carnitine at 0, 500, or 1000 mg kg−1 diet, dl-carnitine at 1000 mg kg−1 diet, or carnitine chloride to provide 1000 mg carnitine kg−1 diet. Juvenile hybrid striped bass (3.3 g fish−1) were stocked into individual 38-l aquaria connected as a brackish water (6‰), recirculating system and fed each diet in triplicate for 9 weeks. Supplementation of the diet with 1000 mg carnitine kg−1 increased muscle carnitine from 35.5 to 47.7 μg g−1 tissue. Carnitine supplementation did not result in increased weight gain regardless of carnitine level or type; however, weight gain showed a significant (p〈0.05) response to dietary lipid with fish fed diets containing 10% lipid growing 34% more than fish fed diets with 5% lipid. The hepatosomatic index also was unaffected by diet, but the intraperitoneal fat (IPF) ratio was significantly elevated (5.1 vs 3.2%) in fish fed diets with 10% lipid compared to those fed diets with 5% lipid. Fish fed diets containing 1000 mg carnitine kg−1 had increased IPF ratio values at 4.7% compared to 3.9% for fish fed the basal diet. Liver lipid also was responsive to dietary treatment, increasing from 6.7 to 8.8% of wet weight as dietary lipid increased from 5 to 10%. The relative quantities of triglycerides, free fatty acids and phospholipids in muscle and liver were not influenced by carnitine level, carnitine type or dietary lipid level. Supplementation of carnitine does not appear to be beneficial to hybrid striped bass based on either growth performance or body composition.
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  • 67
    ISSN: 1573-5028
    Keywords: Arabidopsis thaliana ; β-glucuronidase (GUS) reporter gene ; gene expression ; isoprenoids ; mevalonate kinase ; transgenic plants
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Mevalonate kinase (MVK), the enzyme that catalyzes the phosphorylation of mevalonate to produce mevalonate 5-phosphate, is considered as a potential regulatory enzyme of the isoprenoid biosynthetic pathway. The Arabidopsis thaliana MVK gene corresponding to the MVK cDNA previously isolated has been cloned and characterized. RNAse protection analysis indicated that the expression of the MVK gene generates three mRNA populations with 5′ ends mapping 203, 254 and 355 nt upstream of the MVK ATG start codon. Northern blot analysis showed that the MVK mRNA accumulates preferentially in roots and inflorescences. Histochemical analysis, with transgenic A. thaliana plants containing a translational fusion of a 1.8 kb fragment of the 5′ region of the MVK gene to the β-glucuronidase (GUS) reporter gene, indicated that the MVK 5′-flanking region directs widespread expression of the GUS gene throughout development, although the highest levels of GUS activity are detected in roots (meristematic region) and flowers (sepals, petals, anthers, style and stigmatic papillae). The expression pattern of the MVK gene suggests that the role of the encoded MVK is the production of a general pool of mevalonate-5-phosphate for the synthesis of different classes of isoprenoids involved in both basic and specialized plant cell functions. Functional promoter deletion analysis in transfected A. thaliana protoplasts indicated that regulatory elements between positions −295 and −194 of the MVK 5′-flanking region are crucial for high-level MVK gene expression.
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  • 68
    ISSN: 1573-5028
    Keywords: gene expression ; hypersensitive responses ; plant defense responses ; salicylic acid ; tobacco mosaic virus ; WRKY DNA-binding proteins
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A pathogen- and salicylic acid (SA)-induced DNA-binding activity has been recently identified in tobacco that is related to a previously identified class of WRKY DNA-binding proteins. To identify members of the WRKY gene family associated with this DNA-binding activity, we have attempted to isolate those WRKY genes that are induced by pathogen infection. Using a domain-specific differential display procedure, we have isolated two tobacco WRKY genes, tWRKY3 and tWRKY4, that are rapidly induced in resistant tobacco plants after infection by tobacco mosaic virus (TMV). Both tWRK3 and tWRKY4 encode proteins with a single WRKY domain that contain the conserved WRKYGQK sequence. Unlike other isolated WRKY proteins that contain the Cys2His2 zinc motif, tWRKY3 and tWRKY4 appear to contain the Cys2HisCys zinc motif. Nonetheless, both tWRKY3 and tWRKY4 are capable of binding DNA molecules with the W-box (TTGAC) element recognized by other WRKY proteins. Expression of the tWRKY3 and tWRKY4 genes could be rapidly induced not only by TMV infection but also by SA or its biologically active analogues that are capable of inducing pathogenesis-related genes and enhanced resistance. Interestingly, induction of both genes by TMV infection was still observed in resistant tobacco plants expressing the bacterial salicylate hydroxylase gene (nahG), although the levels of induction appeared to be reduced. Identification of pathogen- and SA-induced genes encoding WRKY DNA-binding proteins should facilitate future studies on the regulation and functions of this novel group of DNA-binding proteins.
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  • 69
    ISSN: 1573-5028
    Keywords: gene expression ; glutamine synthetase ; legume-Rhizobium symbiosis ; nitrogen assimilation ; root nodules
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract In this paper we have studied the localisation of expression of the two functional cytosolic glutamine synthetase (GS) genes, MtGSa and MtGSb, in root nodules of the model legume Medicago truncatula. We have used a combination of different techniques, including immunocytochemistry, in situ hybridisation and promoter β-glucuronidase (GUS) fusions in transgenic plants, to provide the means of correlating gene expression with protein localisation. These studies revealed that transcriptional regulation (mRNA synthesis) plays an important part in controlling GS protein levels in nodules of M. truncatula. The major locations of cytosolic GS mRNA and protein are the central tissue, the parenchyma and the pericycle of the vascular bundles. These findings indicate that in nodules, GS might be involved in other physiological processes in addition to the primary assimilation of ammonia released by the bacterial nitrogenase. The two genes show different but overlapping patterns of expression with MtGSa being the major gene expressed in the infected cells of the nodule. Promoter fragments of 2.6 kb and 3.1 kb of MtGSa and MtGSb, respectively, have been sequenced and primer extension revealed that the MtGSb promoter is expressed in nodules from an additional start site that is not used in roots. Generally these fragments in the homologous transgenic system were sufficient to drive GUS expression in almost all the tissues and cell types where GS proteins and transcripts are located except that the MtGSa promoter fragment did not express GUS highly in the nodule infected cells. These results indicate that the cis-acting regulatory elements responsible for infected-cell expression are missing from the MtGSa promoter fragment.
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  • 70
    ISSN: 1573-5028
    Keywords: epidermis ; gene expression ; glycine-rich protein ; lipid transfer protein ; proline-rich protein ; stomata
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Guard cells are specialized and metabolically active cells which arise during the differentiation of the epidermis. Using Nicotiana glauca epidermal peels as a source of purified guard cells, we have constructed a cDNA library from guard cell RNA. In order to isolate genes that are predominantly expressed in guard cells, we performed a differential screen of this library, comparing the hybridization of a radiolabeled cDNA probe synthesized from guard cell RNA to that from a mesophyll cell cDNA probe. Sixteen clones were isolated based on their greater level of hybridization with the guard cell probe. Of these, eight had high homology to lipid transfer protein (LTP), two were similar to glycine-rich protein (GRP), and one displayed high homology to proline-rich proteins from Arabidopsis thaliana (AtPRP2, AtPRP4) and from potato guard cells (GPP). Northern analysis confirmed that one or more NgLTP genes, NgGRP1, and NgGPP1 are all differentially expressed, with highest levels in guard cells, and low or undetectable levels in mesophyll cells and in roots. In addition, all are induced to some degree in drought-stressed guard cells. NgLTP and NgGRP1 expression was localized by in situ hybridization to the guard cells and pavement cells in the epidermis. NgGRP1 expression was also detected in cells of the vasculature. Genomic Southern analysis indicated that LTP is encoded by a family of highly similar genes in N. glauca. This work has identified members of a subset of epidermis- and guard cell-predominant genes, whose protein products are likely to contribute to the unique properties acquired by guard cells and pavement cells during differentiation.
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  • 71
    ISSN: 1573-5028
    Keywords: chitinase function ; flower-predominant ; gene expression ; molecular cloning ; monocotyledon ; promoter
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A flower-predominant cDNA for a gene, termed OsChia1;175, was isolated from a cDNA library of rice pistils. Northern blot and RT-PCR analyses revealed that the OsChia1;175 gene is highly expressed in floral organs (pistils, stamens and lodicules at the heading stage) but not or at an extremely low level in vegetative organs. OsChia1;175 encodes a protein that consists of 340 amino acid residues, and the putative mature protein shows 52% to 63% amino acid identity to class I chitinases of rice or other plants. The phylogenetic tree shows that the OsChia1;175 protein is a new type of plant class I chitinase in rice. The expression of OsChia1;175 in vegetative organs is not induced by several chemicals, UV, and wounding. The soluble putative mature OsChia1;175 protein expressed in Escherichia coli exhibited chitinase activity in the assay with colloidal chitin as a substrate. Genomic Southern analysis revealed that the OsChia1;175 gene was organized as a low-copy gene family. The rice genomic library was screened and a genome clone corresponding to OsChia1;175 was isolated. The transcription start sites of the OsChia1;175 gene were mapped by primer extension analysis. The 1.2 kb putative promoter region of the OsChia1;175 gene was fused to the GUS (β-glucuronidase) gene, and this chimeric gene was introduced to rice by Agrobacterium-mediated transformation. The flower-predominant gene expression was identified also in the transgenic rice plants. The high promoter activity was detected in the stigmas, styles, stamens and lodicules in transgenic plants. The possible functions of OsChia1;175 are discussed.
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  • 72
    ISSN: 1573-5028
    Keywords: anaerobiosis ; electrophoretic mobility shift assays ; gene expression ; glyceraldehyde-3-phosphate dehydrogenase ; Nicotiana tabacum ; transgenic plants
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The promoter of the maize glyceraldehyde-3-phosphate dehydrogenase 4 gene (GapC4) confers strong, specific and ubiquitous anaerobic reporter gene expression in tobacco. To identify factors required for heterologous anaerobic gene expression, 19 progressive 5′ and 3′ promoter deletions were linked to a chimeric GapC4 TATA box-β-glucuronidase (GUS) reporter gene construct and transformed into tobacco. In all transgenic lines aerobic expression values were in the range obtained for negative controls while histochemical GUS assays reveal some weak expression in roots only. Anaerobic induction of about 100-fold to more than 1000-fold above unspecific background is mediated by a region of about 190 bp of the GapC4 promoter. Anaerobic reporter gene induction strongly decreases upon deletion of a 20 bp fragment from −286 to −266 relative to the transcription start point. This fragment harbours putative cis-acting sequences. Electrophoretic mobility shift assays with a 50 bp fragment harbouring these cis sequences reveal a high-mobility complex that is formed with nuclear extracts from aerobic and anaerobic leaf tissue while an additional low-mobility complex is anaerobiosis-specific. The formation of the high-mobility complex requires the sequence GTGGGCCCG. The 50 bp fragment alone confers weak and orientation-dependent anaerobic induction to a GapC4 TATA box-β-glucuronidase (GUS) reporter gene.
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  • 73
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    Plant molecular biology 43 (2000), S. 659-675 
    ISSN: 1573-5028
    Keywords: A-type cyclins ; cell cycle ; gene expression ; regulation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Although the basic mechanisms which control the progression through the cell cycle appear to be conserved in all higher eukaryotes, the unique features of the plant developmental programme must be somehow reflected in a plant-specific regulation of the factors which control cell division. In the past few years, considerable progress has been achieved in identifying the major components of the cell cycle machinery in plants, especially the cyclin-dependent kinases (CDKs) and their regulatory subunits, the cyclins. The question of how these components direct expression of specific genes at specific stages of the cell cycle, and how they are themselves regulated, constitutes a challenge for the present and for the years to come. This review summarizes our current knowledge of a particular class of plant cyclins, the A-type cyclins, which can be further subdivided into three structural groups. The putative functions of these A-type cyclins are discussed in relation to the presence of remarkable motifs in their amino acid sequences, and to their specific transcriptional regulation, protein amount and subcellular localization.
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  • 74
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    Plant molecular biology 43 (2000), S. 569-581 
    ISSN: 1573-5028
    Keywords: cell cycle cell differentiation ; cell proliferation ; growth ; shoot apical meristem
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The shoot apical meristem is a group of rapidly dividing cells that generate all aerial parts of the plant. It is a highly organised structure, which can be divided into functionally distinct domains, characterised by specific proliferation rates of the individual cells. Genetic studies have enabled the identification of regulators of meristem function. These factors are involved in the formation and maintenance of the meristem, as well as in the formation of the primordia. Somehow, they must also govern cell proliferation rates within the shoot apex. Possible links between meristem regulators and the cell cycle machinery will be discussed. In order to analyse the role of cell proliferation in development, cell cycle gene expression has been perturbed using transgenic approaches and mutation. The effect of these alterations on growth and development at the shoot apex will be presented. Together, these studies give a first insight into the regulatory networks controlling the cell cycle and into the significance of cell proliferation in plant development.
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  • 75
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    Plant molecular biology 44 (2000), S. 73-84 
    ISSN: 1573-5028
    Keywords: auxin ; Aux/IAA ; dgt ; gene expression ; Lycopersicon esculentum ; signal transduction
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The diageotropica (dgt) mutation has been proposed to affect either auxin perception or responsiveness in tomato plants. It has previously been demonstrated that the expression of one member of the Aux/IAA family of auxin-regulated genes is reduced in dgt plants. Here, we report the cloning of ten new members of the tomato Aux/IAA family by PCR amplification based on conserved protein domains. All of the gene family members except one (LeIAA7) are expressed in etiolated tomato seedlings, although they demonstrate tissue specificity (e.g. increased expression in hypocotyls vs. roots) within the seedling. The wild-type auxin-response characteristics of the expression of these tomato LeIAA genes are similar to those previously described for Aux/IAA family members in Arabidopsis. In dgt seedlings, auxin stimulation of gene expression was reduced in only a subset of LeIAA genes (LeIAA5, 8, 10, and 11), with the greatest reduction associated with those genes with the strongest wild-type response to auxin. The remaining LeIAA genes tested exhibited essentially the same induction levels in response to the hormone in both dgt and wild-type hypocotyls. These results confirm that dgt plants can perceive auxin and suggest that a specific step in early auxin signal transduction is disrupted by the dgt mutation.
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  • 76
    ISSN: 1573-5028
    Keywords: Arabidopsis thaliana ; calcium-binding protein ; caleosin ; EF-hand ; gene expression ; lipid bodies ; vesicles
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract We have previously identified a rice gene encoding a 27 kDa protein with a single Ca2+-binding EF-hand and a putative membrane anchor. We report here similar genes termed caleosins, CLO, in other plants and fungi; they comprise a multigene family of at least five members in Arabidopsis (AtClo1–5). Northern hybridization demonstrated that AtClo2–4 mRNAs levels were low in various tissues, while AtClo1 mRNA levels were high in developing embryos and mature seeds. Analysis of transgenic Arabidopsis plants expressing the GUS reporter under control of the AtClo1 promoter showed strong levels of expression in developing embryos and also in root tip cells. Antibodies raised against AtCLO1 were used to detect caleosin in cellular fractions of Arabidopsis and rapeseed. This indicated that caleosins are a novel class of lipid body proteins, which may also be associated with an ER subdomain.
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  • 77
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    Fish physiology and biochemistry 22 (2000), S. 119-123 
    ISSN: 1573-5168
    Keywords: food competition ; growth ; size matching ; Sparus aurata
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effects of food competition and relative size of group members on growth of sea bream, Sparus aurata were tested in groups composed of four fish. Each group consisted of a medium sized test fish (approximately 250 mg) and three fish larger or smaller than the test fish. In the first experiment food competition was addressed directly by contrasting its presence with its absence. Neither food competition nor relative size of school members had a significant effect on growth. However, there was a highly significant interaction between these two main effects. Under conditions of food competition the medium sized test fish had a three times higher specific growth rate when surrounded by small vs large fish. Under conditions of no food competition when the test fish were separated during feeding a similar but reverse pattern occurred due to differences in food conversion efficiency. In the second experiment, the effects of food quantity and relative size of group members were tested. Both main effects and their interaction were highly significant. Under conditions of low food competition (i.e., surplus food supply) fish grew again better when surrounded by larger fish as compared to their growth rate when surrounded by smaller ones. Size matching via a differential growth rate in a schooling species such as sea bream was suggested to increase the confusion effect by reducing the ability of a predator to focus on an odd sized fish. The implications of direct competition for food for the efficient culture of this species are discussed.
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  • 78
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    Fish physiology and biochemistry 22 (2000), S. 255-262 
    ISSN: 1573-5168
    Keywords: CHD3 ; cell culture ; complement ; differential mRNA display polymerase chain reaction ; growth ; nucleolin ; protein kinase ; rainbow trout ; RTG-2 cell ; salinity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The direct effect of osmolality on growth and mRNA population were investigated in the rainbow trout cell line (RTG-2). These cells can grow in the media of osmolalities ranging from 200 to 600 mosmol kg-1. With two-dimensional electrophoresis, the in vitro translation of poly(A+) RNA isolated from these cells showed osmoresponsive changes in the population of translatable mRNAs. Using differential mRNA display polymerase chain reaction, however, we identified inducible cDNA products in hyper-osmotic and hypo-osmotic media as third component of complement, and as homologues of known genes: an atypical protein kinase regulated by the thyrotropin-dependent mitogenic pathway, nucleolin and CHD3. The remaining cDNAs have no significant homology in GenBank. Northern blots demonstrate that their mRNA levels were induced in hyper-osmotic and hypo-osmotic media, but not by other stresses. The expressed proteins of these mRNAs may be involved directly or indirectly in the adaptation of RTG-2 cells to different osmolalities probably through the osmotic signal transduction and adjustment in cellular metabolism to osmotic stress.
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    Fish physiology and biochemistry 22 (2000), S. 245-254 
    ISSN: 1573-5168
    Keywords: swimming velocity ; thermal tolerance ; Oncorhynchus mykiss ; metabolism ; food consumption ; growth
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Although thermal influences on the physiology of rainbow trout (Oncorhynchus mykiss) have been widely studied, there is little information about the responses of different genetic strains to temperatures. The effects of water temperature (10, 14, 19, 22, and 25 °C) on food consumption rate, growth rate, gross conversion efficiency, resting routine oxygen consumption rate, upper critical thermal tolerance and critical swimming velocity were investigated in juvenile rainbow trout of the Eagle Lake (O. m. aquilarum) subspecies and the Mt. Shasta strain. No strain-related differences in conversion efficiency, oxygen consumption rates, thermal tolerance or swimming performance were observed in 1995 (19, 22, and 25 °C) or 1996 (10, 14, and 19 °C), but Mt. Shasta strain trout grew faster at highest temperatures than did Eagle Lake trout. Food consumption rates, growth rates, conversion efficiency, and oxygen consumption rates declined at the extreme temperatures (10 and 25 °C) in both Eagle Lake and Mt. Shasta trout. Swimming performance was temperature-independent between 10 and 19 °C (overall mean: 5.43 body lengths s−1).
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  • 80
    ISSN: 1573-6881
    Keywords: Mitochondrial biogenesis ; copy number ; gene expression ; mitochondrial transcription factor ; nuclear—mitochondrial communication ; stimulation ; endurance training
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology , Physics
    Notes: Abstract Mitochondrial proliferation was studied in chronically stimulated rabbit skeletal muscle over a period of 50 days. After this time, subunits of COX had increased about fourfold. Corresponding mRNAs, encoded on mitochondrial DNA as well as on nuclear genes, were unchanged when related to total tissue RNA, however, they were elevated two- to fivefold when the massive increase of ribosomes per unit mass of muscle was taken into account. The same was true for the mRNA encoding mitochondrial transcription factor A. Surprisingly, tissue levels of mtTFA protein were reduced about twofold, together with mitochondrial DNA. In conclusion, mito chondria are able to maintain high rates of mitochondrial transcription even in the presence of reduced mtTFA protein and mtDNA levels. Therefore, stimulated mtTFA gene expression accompanies stimulated mitochondrial transcription, as in other models, but it is not sufficient for an increase of mtDNA copy number and other, yet unknown, factors have to be postulated.
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    Journal of economic growth 5 (2000), S. 5-32 
    ISSN: 1573-7020
    Keywords: inequality ; growth ; Kuznets curve ; Gini coefficient
    Source: Springer Online Journal Archives 1860-2000
    Topics: Economics
    Notes: Abstract Evidence from a broad panel of countries shows little overall relation between income inequality and rates of growth and investment. For growth, higher inequality tends to retard growth in poor countries and encourage growth in richer places. The Kuznets curve—whereby inequality first increases and later decreases during the process of economic development—emerges as a clear empirical regularity. However, this relation does not explain the bulk of variations in inequality across countries or over time.
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    Journal of economic growth 5 (2000), S. 185-206 
    ISSN: 1573-7020
    Keywords: innovation ; growth ; inequality ; hierarchic demand ; multiple equilibria
    Source: Springer Online Journal Archives 1860-2000
    Topics: Economics
    Notes: Abstract This article analyzes the impactof inequality on growth when consumers have hierarchic preferencesand technical progress is driven by innovations. With hierarchicpreferences, the poor consume predominantly basic goods, whereasthe rich consume also luxury goods. Inequality has an impacton growth because it affects the level and the dynamics of aninnovator's demand. It is shown that redistribution from veryrich to very poor consumers can be beneficial for growth. Ingeneral, the growth effect depends on the nature of redistribution.Due to a demand externality from R&D activities, multipleequilibria are possible.
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  • 83
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    Journal of economic growth 5 (2000), S. 341-360 
    ISSN: 1573-7020
    Keywords: growth ; investment ; human capital ; financial development
    Source: Springer Online Journal Archives 1860-2000
    Topics: Economics
    Notes: Abstract Thisarticle decomposes the well-documented relationship between financialdevelopment and growth. We examine whether financial developmentaffects growth solely through its contribution to growth in ``primitives'' or factor accumulation rates or whether it alsohas a positive impact on total factor productivity growth. Ourresults suggest that indicators of financial development arecorrelated with both total factor productivity growth and investment.However, the indicators that are correlated with total factorproductivity growth differ from those that encourage investment.In addition, many of the results are sensitive to the inclusionof country fixed effects, which may indicate that the financialdevelopment indicators are proxying for broader country characteristics.
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  • 84
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    Journal of economic growth 5 (2000), S. 361-384 
    ISSN: 1573-7020
    Keywords: capital ; growth ; productivity ; public sector
    Source: Springer Online Journal Archives 1860-2000
    Topics: Economics
    Notes: Abstract The cost of public investment is not the increment to the value ofpublic capital. Unlike with private investors, there is no plausiblebehavioral model in which every dollar that the public sectorspends as ``investment'' creates economically valuable ``capital.''While this simple analytic point is obvious, it has so far beenuniformly ignored in the empirical literature on economic growth,which uses—at best—cumulated, depreciated, investmenteffort (CUDIE) as a proxy for capital stocks. However, particularlyfor developing countries the difference between investment costand capital value is of first-order empirical importance: governmentinvestment is half of more of total investment, and calculationspresented here suggest that in many countries government investmentspending has created little useful capital. This has implicationsin three broad areas. First, none of the existing empirical estimatesof the impact of public spending has identified the productivityof public capital. Even where public capital has a potentiallylarge contribution to production, public-investment spendingmay have had a low impact. Second, it implies that all estimatesof total factor productivity in developing countries are deeplysuspect as there is no way to empirically distinguish betweenlow growth because of investments that create no factors andlow growth due to slow productivity growth. Third, multivariateregressions to date have not adequately controlled for capitalstock growth, which leads to erroneous interpretations of regressioncoefficients.
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  • 85
    ISSN: 1573-6857
    Keywords: dendritic polymer ; reporter gene ; gene expression ; transfection
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Cyclic core dendritic polymer is a new type of synthetic polymers. The ability of generation 4 of the dendrimer with a core of 1,4,7,10-tetraazacyclododecane to function as an effective gene delivery vector was investigated. Results from fluorescence in situhybridization (FISH) show that the pCH 110 plasmid DNA was transferred into human small intestine cancer metastatic ascites (HICMA) cells induced by this kind of dendrimer as a vector. The transferred LacZ, GFP and luciferase genes were highly expressed in the transfected HICMA, COS-7 and 293 cells. These studies demonstrate that the dendrimer can transfect mammalian cells in vitrowhich offers an alternatively efficient method for mammalian gene transfer.
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  • 86
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    Journal of economic growth 5 (2000), S. 253-275 
    ISSN: 1573-7020
    Keywords: knowledge ; ideas ; growth ; knowledge set ; paradigm ; combination of ideas
    Source: Springer Online Journal Archives 1860-2000
    Topics: Economics
    Notes: Abstract This articlepresents a model of knowledge, seen as a set of ideas definedin a multidimensional idea space. Knowledge is created throughconvex combinations of older ideas and through paradigm shifts.When normal science has made the knowledge set convex, scientificopportunity is exhausted. Individual countries are endowed withdifferent knowledge sets, which gives rise to idea gaps. Thegrowth of a country's knowledge depends on diffusion from othercountries, on own production, and on the state of its human capitaland institutions. In the long run, economic growth will dependon knowledge growth, but only paradigm shifts can save R&Dfrom diminishing returns
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  • 87
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    Review of industrial organization 17 (2000), S. 229-248 
    ISSN: 1573-7160
    Keywords: Age ; firms' ; growth ; jobs ; size
    Source: Springer Online Journal Archives 1860-2000
    Topics: Economics
    Notes: Abstract This paper relates recent empiricalresearch on the growth of U.K. companies to the maineconomic theories of firms' growth and to empiricalresults for the U.S.A. Smaller and younger firms havebeen growing more quickly than larger and older firms, thus generating proportionately more new jobs. Theseresults do not support the various theories of staticand dynamic economies of scale. Serial correlation ofgrowth is very low, so success does not persist. Thesystematic tendency for small and younger firms togrow more quickly is the main reason why firm growthis not entirely stochastic.
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  • 88
    ISSN: 1440-1703
    Keywords: growth ; interspecific interactions ; patch structure ; seagrass ; Thailand
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Seagrass beds in South-east Asia sometimes consist of a mosaic of different species in monospecific patches. We examined whether the magnitude of within-patch variation in the seagrass Halophila ovalis is affected by the presence or absence of surrounding vegetation consisting of another seagrass species Thalassia hemprichii in an intertidal flat in Thailand waters. We measured biomass and growth rates of H. ovalis at the edges and centers of two different types of patches: (i) H. ovalis patches adjoining T. hemprichii vegetation (HT patches), and (ii) H. ovalis patches adjoining unvegetated sand flats (HS patches). Furthermore, we examined the possible effects of interspecific interactions on the growth of H. ovalis by experimentally removing adjoining T. hemprichii at the edges of HT patches. The biomass of H. ovalis was greater at the patch centre than the patch edge in both types of patches. For the growth rate of H. ovalis, significant interactions were detected between patch types and positions in patches. The difference in growth was significant and more than 4-fold between edges and centers of the HS patches, whereas the growth was not significantly different between edges and centers of the HT patches. The removal of T. hemprichii did not significantly affect the growth rate of H. ovalis at the edge of the HT patches. These findings demonstrate that the magnitude of within-patch variation in H. ovalis growth is affected by the conditions of adjoining habitats. However, any effects of local competition with T. hemprichii on H. ovalis growth were not evident in this short-term manipulative experiment.
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  • 89
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    Boundary layer meteorology 94 (2000), S. 139-163 
    ISSN: 1573-1472
    Keywords: Turbulence ; Coherent eddies ; Plant canopy ; Plane mixing layer ; Canopy shear scale ; Atmospheric stability
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract An analogy has been established between a plane mixing layer and the atmospheric flow near the top of a vegetation canopy. It is based on a common feature, a strong inflection in the mean velocity profile, responsible for hydrodynamical instabilities that set the pattern for the coherent eddies and determine the turbulence length scales. In an earlier study, this analogy was tested using a small data set from thirteen experiments, all in near-neutral conditions. It provided a good prediction of the streamwise spacing Λw of the dominant canopy eddies (evaluated from time series of vertical velocity) that appears to depend on a shear length scale Ls = U(h)/U'(h), where h is canopy height, U is mean velocity and U' the vertical gradient dU/dz. The present analysis utilizes an extensive data set of approximately 700 thirty-minute runs, from six experiments on two forest sites and a maize crop, with a large range of stability conditions. Λw was estimated for each run using the wavelet transform as an objective, automated detection method. First, the variations of Λw and Ls with atmospheric stability are discussed. Neutral and unstable values exhibit a large scatter whereas in stable conditions both variables decrease with increasing stability. It is subsequently found that Λw is directly related to Ls, in a way close to the neutral prediction Λw /h = 8.1Ls/h.The Strouhal number Str = Ls /Λw is then shown to vary with atmospheric stability, weakly in unstable conditions, more significantly in stable conditions. Altogether these results suggest that, to some extent, the plane mixing-layer analogy can be extended to non-neutral conditions. It is argued that the primary effect of atmospheric stability, at least in stable conditions, is to modify the shear length scale Ls through changes in U(h) and U'(h), which in turn determines the streamwise spacing of the active, coherent motions.
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  • 90
    ISSN: 1573-1472
    Keywords: Field measurements ; Thinned forests ; Turbulence ; Wind tunnel
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract Many forest management methods alterstand density uniformly. The effectsof such a change on the wind andturbulence regimes in the forest arecritical to a number of processes governingthe stability of the stand and itsmicroclimate. We measured wind speed andturbulence statistics with a Dantec tri-axialhot-film probe in model forests of variousdensities (31–333 trees m-2), created byremoving whole trees in a regular pattern in awind tunnel, and compared them with similarmeasurements made with propeller anemometers insimilarly thinned plots (156–625 trees ha-1)within a Sitka spruce stand in Scotland. The results agree well, in general, with measurements made inother such studies with diverse canopy types.The systematic variations with density and verticalleaf-area distribution (which differed betweenwind-tunnel and field trees) in our work can explainmuch of the variability shown in scaled profiles ofbasic turbulence statistics reported in theliterature. The wind tunnel and field results are shown to be in good agreement overalldespite the difference in vertical leaf-areadistribution. Within-canopy and isolated-treedrag coefficients in the wind tunnel showthat tree-scale shelter effects increase astree density increases. The measurements indicatethat turbulence in the canopy is dominated bylarge-scale structures with dimensions of the sameorder as the height of the canopy as found inother studies but suggest that inter-tree spacing also modulates the size of these structures. These structures are associated with the sweeps that dominatemomentum exchange in the canopy and it is thisfact that allows the tri-axial probe to operate sowell despite the relatively narrow range of anglesin which the wind vector is correctly measured. Theratio of streamwise periodicity of these structuresto vorticity thickness varies systematically withtree density in the range 2.7–5.1, which spans theexpected range of 3.5–5 found in a laboratorymixing-layer, suggesting that tree spacing imposes another relevant length scale. This test andothers show that the results are in agreement withthe idea that canopy turbulence resembles that of a mixing layer even though they disagree with, and challenge the linear relationship between, streamwise periodicity andshear length scale presented recently in theliterature. The measurements are also in goodoverall agreement with simple drag models presented recently by other researchers.
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  • 91
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    Boundary layer meteorology 96 (2000), S. 211-255 
    ISSN: 1573-1472
    Keywords: Canopy ; Characteristic eddy ; Empirical-orthogonal-function ; Shear flow ; Turbulence ; Wind tunnel
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract We have conducted an Empirical Orthogonal Functionanalysis (EOF) of a three dimensional, 2-pointvelocity covariance field, measured in a wind tunnel. The rate of convergence of the EOF sequence was usedas an objective test for the presence of distinctlarge turbulent structures. We found that in theroughness sublayer (2h 〉 z 〉 0) the sequence convergedmuch more rapidly than in the lower surface layer(6h 〉 z 〉 0), 75% of the total velocity variancebeing captured by the first three of 42 eigenmodes;h is the canopy height. The analysis was extended to three dimensions, whereover 50% of the variance and most of the spatialstructure of the covariance fields were captured by aneven smaller fraction of the total number ofeigenmodes. With some relatively weak additionalassumptions we were able to construct the velocityfield of a ‘characteristic eddy’ or large coherentstructure. This consisted of a pair ofcounter-rotating streamwise vortices centred above thecanopy. The sense of rotation of the vortex pair wasopposite to that found in the wall region of boundarylayers but matched that found in plane mixing layers. A strong gust or sweep motion generated between thevortices was responsible for most of the shear stresscarried by the large eddies. The region of significanttransport of streamwise momentum by the characteristiceddy is much smaller than the region of coherence of theeddy's velocity field.
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  • 92
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    Boundary layer meteorology 97 (2000), S. 331-357 
    ISSN: 1573-1472
    Keywords: Aircraft measurements ; Entrainment ; Stratocumulus ; Structure functions ; Turbulence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Geosciences , Physics
    Notes: Abstract During the Dynamics and Chemistry of the MarineStratocumulus (DYCOMS) experiment in July–August 1985, the NCAR Electra aircraft flew a series of flight legs just at the top of the marinestratocumulus cloud decks that cap the mixed layer off the coast of southernCalifornia. Because of the corrugated structure of the cloud-top, the aircraft, which was flown at a nearly constant level and adjusted only to maintain its altitude at the average cloud-top height, was alternately within and above the clouds – roughly half the time in each domain. These legs were used to examine the structure of the cloud-top by compositing the segments on either side of the cloud/clear-air interface, which was identified by the transitions of liquid water measured by the Forward Scattering Spectrometer Probe (either increasing or decreasing) through a threshold of 0.04 × 10-3 kg m-3.An equivalent vertical distance (EVD) from the cloud-top was obtained from the horizontal flight legs by estimating the average slope of the cloud-top from the cloud-top radiation temperature. The results show that a near discontinuity occurs in variables across cloud top over an EVD of 0.3 m, but that above this, the air has already been modified by boundary-layer air. Thus, cloud-top is not the limit of mixing of boundary-layer air. This mixing may extend to tens of metres or more. The bulk Richardson number in the vicinity of cloud-top increases from near zero within the cloud to about 1.2 at an EVD of 3–6 m above cloud. Fluctuations of the three velocity components within cloud are nearly equal; above cloud the vertical component structure function is about half the horizontal components. The scalar structure functions are about an order of magnitude higher above cloud than in cloud. The structure parameters of temperature and humidity measured just below cloud-top agree reasonably well with predicted values based on a previously-developed model for the clear convective boundary layer. Above cloud, the scalar structure parameters are much larger, but their interpretation is questionable, since this region does notcontain isotropic turbulence.
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  • 93
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    World journal of microbiology and biotechnology 16 (2000), S. 297-301 
    ISSN: 1573-0972
    Keywords: Anaerobic bacteria ; growth ; protease ; psychrotrophs ; temperature ; volatile fatty acids
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Abstract Five anaerobic proteolytic bacteria were isolated from water bodies of Leh, India, where the ambient temperature varies from −25 to 25 °C. Isolates showed growth at all temperatures ranging from 5 to 37 °C except SPL-4 and SPL-5 which showed no growth at 5 °C. The cultures could grow and produce proteases on various protein substrates and the yield varied with the substrates. Two of the cultures showed the presence of spores. Acetate was the dominant VFA during hydrolysis of protein substrates.
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  • 94
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    Environmental and resource economics 17 (2000), S. 353-373 
    ISSN: 1573-1502
    Keywords: environmental transition ; growth ; Kuznets ; pollution ; transboundary externalities
    Source: Springer Online Journal Archives 1860-2000
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Economics
    Notes: Abstract The Environmental Kuznets Curve (EKC) is a hypothesis which implies that it is possible to “grow out of environmental degradation”. Most theoretical models of the EKC relation have not accounted for transboundary and intergenerational externalities nor have empirical studies provided evidence that validates an inverted U shaped relation between environmental degradation and economic growth for pollution problems where the effects are far-displaced or are long-delayed. This paper integrates the theory of transboundary externalities into the most common theoretical framework applied to the EKC hypothesis. It shows that where a significant proportion of the environmental impacts of economic activity occurs outside the territories in which those activities take place, the de-linking of growth and environmental degradation is less likely to happen. This proposition is demonstrated by assuming that decisionmakers have a Nash-type non cooperative strategic behavior.
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  • 95
    ISSN: 1573-1561
    Keywords: Nicotiana sylvestris ; nitrogen ; nicotine ; allocation ; growth ; reproduction ; induced defenses ; costs of defense
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract We present the first evidence for a fitness cost of an inducible response that is detectable in a nitrogen (N) currency. Nicotine is an induced defense in Nicotiana sylvestris that can utilize 5–8% of the plant's total N, an investment that apparently cannot be recouped by metabolism. Induced nicotine production is endogenously regulated by jasmonic acid (JA), and we treated leaves with the methyl ester of this wound hormone (MeJA) in quantities (0, 25, 250 μg) known to elicit changes in endogenous JA and subsequent nicotine responses comparable to those elicited by mechanical wounding and herbivory in this species. We grew plants in competition chambers (CCs) in which three same-sized plants could compete for a communal but fixed pool of 15NO3 to quantify the outcome of competition for this fitness-limiting resource that is used both in defense and seed production. Competition profoundly increased all measures of growth and reproductive performance measured per milligram of N acquired. While plants acquired all the N supplied to them in the hydroponic solution, plants grown in CCs (as compared those grown in individual chambers—ICs) retained more of this N and produced more biomass, had larger nicotine contents, allocated less of their N to nicotine, produced larger floral stalks with more flowers, aborted fewer flowers, matured more capsules, and produced a greater mass of seed. Plants grown in ICs produced heavier seed, but this difference did not translate into a difference in seed viability. MeJA treatment increased nicotine concentrations in proportion to the amount applied and significantly reduced growth (13–23%) and reproductive (31–44%) performance for plants grown with uninduced competitors, reflecting a large opportunity cost of induction. The effects of MeJA treatment on growth and reproduction were significantly less pronounced for plants grown in ICs. MeJA treatment significantly reduced the ability of plants to compete for [15N]KNO3 (reducing uptake by 9.5% and 23.7% for 25- and 250-μg MeJA-treated plants, respectively); no reductions in N acquisition were found in IC grown plants treated with MeJA. This impairment of competitive ability could account for 41–47% of the jasmonate-induced reductions in biomass by the day 15 harvest and 12–20% of the reductions in seed set and, in addition, created by "opportunity benefit" for neighboring uninduced plants, which grew larger, aborted fewer flowers, and matured more seed (a 28% increase) than did uninduced plants competing with similarly uninduced plants. Competition dramatically increased plant growth and reproductive performance, and MeJA treatment of these high-performing plants significantly reduced their competitive ability, which translated into opportunity costs for induced plants and opportunity benefits for neighboring uninduced plants. Induced plants minimized these fitness costs by reducing their use of recently acquired N for nicotine biosynthesis when growing with competitors. MeJA treatments also altered stalk length, flower production, flower abortion, and allocation to seed mass. In spite of all this plasticity, induced responses incur large fitness costs, costs that could be in part attributed to reductions in competitive ability for N. We conclude that inducibility functions to minimize these costs.
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  • 96
    ISSN: 1435-1536
    Keywords: Key words Drag reduction ; Poly(ethylene oxide) ; Hydrodynamic volume ; Ocean thermal energy conversion ; Rotating disk flow ; Turbulence
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
    Notes: Abstract  Polymer-induced turbulent drag reduction in a rotating disk apparatus was investigated using nonionic poly(ethylene oxide) (PEO) in a synthetic saline solution with novel application to ocean thermal energy conversion technology. A maximum total (skin friction plus form) drag reduction of 30% was obtained with 50 wppm of PEO with molecular weight 5.0 × 106. The concentration dependence of the percentage drag reduction for the PEO/saline solution system is found to fit Virk's empirical correlation, and a universal correlation for various molecular weights and Reynolds numbers is also presented. Furthermore, hydrodynamic volume fraction was introduced to correlate drag reduction efficiency with molecular parameters in this PEO/saline solution system.
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  • 97
    ISSN: 1572-9699
    Keywords: differentiation ; FtsZ ; gene expression ; septum ; SsgA ; transmission electron microscopy
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract This paper describes the effects of increased expression of the cell division genes ftsZ, ftsQ, and ssgA on the development of both solid- and liquid-grown mycelium of Streptomyces coelicolor and Streptomyces lividans. Over-expression of ftsZ in S. coelicolor M145 inhibited aerial mycelium formation and blocked sporulation. Such deficient sporulation was also observed for the ftsZ mutant. Over-expression of ftsZ also inhibited morphological differentiation in S. lividans 1326, although aerial mycelium formation was less reduced. Furthermore, antibiotic production was increased in both strains, and in particular the otherwise dormant actinorhodin biosynthesis cluster of S. lividans was activated in liquid- and solid-grown cultures. No significant alterations were observed when the gene dosage of ftsQ was increased. Analysis by transmission electron microscopy of an S. coelicolor strain over-expressing ssgA showed that septum formation had strongly increased in comparison to wild-type S. coelicolor, showing that SsgA clearly influences Streptomyces cell division. The morphology of the hyphae was affected such that irregular septa were produced with a significantly wider diameter, thereby forming spore-like compartments. This suggests that ssgA can induce a process similar to submerged sporulation in Streptomyces strains that otherwise fail to do so. A working model is proposed for the regulation of septum formation and of submerged sporulation.
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  • 98
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    Meccanica 35 (2000), S. 1-15 
    ISSN: 1572-9648
    Keywords: Wind ; Aeroelasticity ; Bridge ; Turbulence ; Mechanics of structures
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics , Physics
    Notes: Abstract Non-stationary aeroelastic wind force processes on a streamlined bridge deck are modelled for use within computations in the range of statistically stationary girder oscillation and for the mathematical investigation of the limit of aeroelastic stability. Time Domain (TD) methods, as the direct integration on a finite-element (FE) model, are applied in structural analyses for taking into consideration both geometric and physical nonlinearities. The FE method requires a continuous form of the force model, which permits an arbitrary discretization in time. The present model is based on continuous step response functions of Wagner-type, taking advantage of modern advances of that theory. Special emphasis is put on the continuity and the existence of equivalent representations in time and frequency domains. A realistic wind load model must include measured force functions and effects from the wind turbulence. For that reason, the force functions are calibrated in wind tunnel tests on section models in grid turbulence and boundary layer flow. The aeroelastic in-phase and out-of-phase forces are identified from highly accurate calibrations experiments on section models up to high frequencies which permits to decrease the time step increment. Turbulence effects on the aeroelastic coefficients are included in mean terms.
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  • 99
    ISSN: 1572-9702
    Keywords: Gallotia ; Lacertidae ; Ophionyssus ; parasitic mites ; ontogeny ; growth ; Canary Islands
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Wild-caught specimens of the lacertid lizard Gallotia galloti eisentrauti from the Canary Island of Tenerife were checked for ectoparasites. The parasitic gamasid mite Ophionyssus galloticolus Fain and Bannert (2000) was very abundant on these lizards. Additionally, parasitism by larvae of two species of Trombiculidae (Prostigmata: Parasitengona) was observed. O. galloticolus was reared in the laboratory on its natural host in order to investigate its life cycle, reproductive biology, and development. The life history of O. galloticolus is documented in detail and compared to literature data of other Ophionyssus species. O. galloticolus was found to be similar to other species of the same genus with respect to the duration of development, the precopulatory association of protonymphs, and the arrhenotokous development of eggs. However, it seems to be more tolerant towards low relative humidity and longer starvation periods than other Ophionyssus species. Evolutionary transformations of the life-history pattern of this genus and other parasitic mites in comparison to its predatory precursors involve a reduction or partial suppression of ontogenetic instars in order to decrease mortality during host-seeking phases, and a compensating increase in growth capacity of the remaining feeding instars facilitated by replacement of sclerites through elastic cuticle or by growth of new cuticle unrelated to a moult (neosomy).
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  • 100
    ISSN: 1573-5087
    Keywords: betaine ; ethanolamine ; growth ; Helianthus annuus L. ; salt stress
    Source: Springer Online Journal Archives 1860-2000
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: Abstract The accumulation of compatible solutes is one of the strategies that plants have developed to tolerate salt stress. Proline and betaine are the main metabolites that accumulate in various species of higher plants in response to salt stress. In Helianthus annuus L., pre-treatment of seeds with ethanolamine led to enhanced seedling tolerance to conditions of saline stress during germination, as evidenced by the greater growth of pretreated seedlings (EAS group) versus untreated seedlings (S group), evaluated through such parameters as length, water and chlorophyll content. During the germination period, a considerable increase was observed in proline levels (up to 300%) in seedlings subjected to saline stress, whereas in the EAS group, the proline increment was much smaller (20%). Starting from the fourth day of germination, betaine levels in seedlings pretreated with ethanolamine and then with water (EAW group) and in EAS showed a significant increase versus C (control) and S seedlings, possibly because such a precursor promotes betaine biosynthesis. This could be responsible for the enhanced growth observed in EAS versus S seedlings, as well as for preventing the decrease in chlorophyll content in the EAS group. The accumulation of betaine seems to correlate with the greater tolerance of these seedlings against stress induced by sodium chloride.
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