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  • Climate change  (5)
  • Acoustics  (3)
  • Frontiers Media  (8)
  • American Institute of Physics (AIP)
  • Milano: Fondazione Eni Enrico Mattei (FEEM)
  • Nature Publishing Group
  • 2015-2019  (8)
  • 1
    Publication Date: 2022-10-27
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Gewirtzman, J., Tang, J., Melillo, J. M., Werner, W. J., Kurtz, A. C., Fulweiler, R. W., & Carey, J. C. Soil warming accelerates biogeochemical silica cycling in a temperate forest. Frontiers in Plant Science, 10, (2019): 1097, doi:10.3389/fpls.2019.01097.
    Description: Biological cycling of silica plays an important role in terrestrial primary production. Soil warming stemming from climate change can alter the cycling of elements, such as carbon and nitrogen, in forested ecosystems. However, the effects of soil warming on the biogeochemical cycle of silica in forested ecosystems remain unexplored. Here we examine long-term forest silica cycling under ambient and warmed conditions over a 15-year period of experimental soil warming at Harvard Forest (Petersham, MA). Specifically, we measured silica concentrations in organic and mineral soils, and in the foliage and litter of two dominant species (Acer rubrum and Quercus rubra), in a large (30 × 30 m) heated plot and an adjacent control plot (30 × 30 m). In 2016, we also examined effects of heating on dissolved silica in the soil solution, and conducted a litter decomposition experiment using four tree species (Acer rubrum, Quercus rubra, Betula lenta, Tsuga canadensis) to examine effects of warming on the release of biogenic silica (BSi) from plants to soils. We find that tree foliage maintained constant silica concentrations in the control and warmed plots, which, coupled with productivity enhancements under warming, led to an increase in total plant silica uptake. We also find that warming drove an acceleration in the release of silica from decaying litter in three of the four species we examined, and a substantial increase in the silica dissolved in soil solution. However, we observe no changes in soil BSi stocks with warming. Together, our data indicate that warming increases the magnitude of silica uptake by vegetation and accelerates the internal cycling of silica in in temperate forests, with possible, and yet unresolved, effects on the delivery of silica from terrestrial to marine systems.
    Description: This research was supported by the National Science Foundation (NSF PLR-1417763 to JT), the Geological Society of America (Stephen G. Pollock Undergraduate Research Grant to JG), the Institute at Brown for Environment and Society, and the Marine Biological Laboratory. Sample analysis and Fulweiler’s involvement were supported by Boston University and a Bullard Fellowship from Harvard University. The soil warming experiment was supported by the National Science Foundation (DEB-0620443) and Department of Energy (DE-FC02-06-ER641577 and DE-SC0005421).
    Keywords: Silica ; Climate change ; Soil ; Warming ; Phytoliths ; Plants ; Biogeochemistry
    Repository Name: Woods Hole Open Access Server
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  • 2
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Turk, D., Wang, H., Hu, X., Gledhill, D. K., Wang, Z. A., Jiang, L., & Cai, W. Time of Emergence of surface ocean carbon dioxide trends in the North American coastal margins in support of ocean acidification observing system design. Frontiers in Marine Science, 6, (2019):91, doi:10.3389/fmars.2019.00091.
    Description: Time of Emergence (ToE) is the time when a signal emerges from the noise of natural variability. Commonly used in climate science for the detection of anthropogenic forcing, this concept has recently been applied to geochemical variables, to assess the emerging times of anthropogenic ocean acidification (OA), mostly in the open ocean using global climate and Earth System Models. Yet studies of OA variables are scarce within costal margins, due to limited multidecadal time-series observations of carbon parameters. ToE provides important information for decision making regarding the strategic configuration of observing assets, to ensure they are optimally positioned either for signal detection and/or process elicitation and to identify the most suitable variables in discerning OA-related changes. Herein, we present a short overview of ToE estimates on an OA variable, CO2 fugacity f(CO2,sw), in the North American ocean margins, using coastal data from the Surface Ocean CO2 Atlas (SOCAT) V5. ToE suggests an average theoretical timeframe for an OA signal to emerge, of 23(±13) years, but with considerable spatial variability. Most coastal areas are experiencing additional secular and/or multi-decadal forcing(s) that modifies the OA signal, and such forcing may not be sufficiently resolved by current observations. We provide recommendations, which will help scientists and decision makers design and implement OA monitoring systems in the next decade, to address the objectives of OceanObs19 (http://www.oceanobs19.net) in support of the United Nations Decade of Ocean Science for Sustainable Development (2021–2030) (https://en.unesco.org/ocean-decade) and the Sustainable Development Goal (SDG) 14.3 (https://sustainabledevelopment.un.org/sdg14) target to “Minimize and address the impacts of OA.”
    Description: HW was partially supported by an NSF grant (OCE#1654232) while being a research associate at TAMUCC.
    Keywords: Ocean acidification ; CO2 fugacity ; Time of emergence ; Climate change ; Novel statistical approaches ; Observing system optimization ; Decision making tool
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  • 3
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Palmer, M. D., Durack, P. J., Paz Chidichimo, M., Church, J. A., Cravatte, S., Hill, K., Johannessen, J. A., Karstensen, J., Lee, T., Legler, D., Mazloff, M., Oka, E., Purkey, S., Rabe, B., Sallee, J., Sloyan, B. M., Speich, S., von Schuckmann, K., Willis, J., & Wijffels, S. Adequacy of the ocean observation system for quantifying regional heat and freshwater storage and change. Frontiers in Marine Science, 6, (2019): 16, doi: 10.3389/fmars.2019.00416.
    Description: Considerable advances in the global ocean observing system over the last two decades offers an opportunity to provide more quantitative information on changes in heat and freshwater storage. Variations in these storage terms can arise through internal variability and also the response of the ocean to anthropogenic climate change. Disentangling these competing influences on the regional patterns of change and elucidating their governing processes remains an outstanding scientific challenge. This challenge is compounded by instrumental and sampling uncertainties. The combined use of ocean observations and model simulations is the most viable method to assess the forced signal from noise and ascertain the primary drivers of variability and change. Moreover, this approach offers the potential for improved seasonal-to-decadal predictions and the possibility to develop powerful multi-variate constraints on climate model future projections. Regional heat storage changes dominate the steric contribution to sea level rise over most of the ocean and are vital to understanding both global and regional heat budgets. Variations in regional freshwater storage are particularly relevant to our understanding of changes in the hydrological cycle and can potentially be used to verify local ocean mass addition from terrestrial and cryospheric systems associated with contemporary sea level rise. This White Paper will examine the ability of the current ocean observing system to quantify changes in regional heat and freshwater storage. In particular we will seek to answer the question: What time and space scales are currently resolved in different regions of the global oceans? In light of some of the key scientific questions, we will discuss the requirements for measurement accuracy, sampling, and coverage as well as the synergies that can be leveraged by more comprehensively analyzing the multi-variable arrays provided by the integrated observing system.
    Description: MP was supported by the Met Office Hadley Centre Climate Programme funded by the BEIS and Defra, and the European Union’s Horizon 2020 Research and Innovation Program under grant Agreement No. 633211 (AtlantOS). The work of PD was prepared the by Lawrence Livermore National Laboratory (LLNL) under Contract DE-AC52-07NA27344 and is a contribution to the U.S. Department of Energy, Office of Science, Climate and Environmental Sciences Division, Regional and Global Modeling and Analysis Program. LLNL Release number: LLNL-JRNL-761158. BS and JC was partially supported by the Centre for Southern Hemisphere Oceans Research, a joint research center between the QNLM and the CSIRO. BS was also supported by the Australian Government Department of the Environment and CSIRO through the National Environmental Science Program. SC was supported by the IRD and by the French national program LEFE/INSU. SC thanks W. Kessler for suggestions concerning Figure 6. BR was supported by the German Alfred-Wegener-Institut Helmholtz-Zentrum für Polar-und Meeresforschung (AWI). J-BS was supported by the CNRS/INSU and the Horizon 2020 Research and Innovation Program under Grant Agreement 637770. SS was supported by the French Institutions ENS, LMD, IPSL, and CNRS/INSU. The work of JW was performed in part at the Jet Propulsion Laboratory, California Institute of Technology, under contract with the National Aeronautics and Space Administration.
    Keywords: Heat content ; Freshwater content ; Salinity ; Temperature ; Ocean observing system ; Climate change ; Climate variability ; Observing system design
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  • 4
    Publication Date: 2022-10-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Capotondi, A., Jacox, M., Bowler, C., Kavanaugh, M., Lehodey, P., Barrie, D., Brodie, S., Chaffron, S., Cheng, W., Dias, D. F., Eveillard, D., Guidi, L., Iudicone, D., Lovenduski, N. S., Nye, J. A., Ortiz, I., Pirhalla, D., Buil, M. P., Saba, V., Sheridan, S., Siedlecki, S., Subramanian, A., de Vargas, C., Di Lorenzo, E., Doney, S. C., Hermann, A. J., Joyce, T., Merrifield, M., Miller, A. J., Not, F., & Pesant, S. Observational needs supporting marine ecosystems modeling and forecasting: from the global ocean to regional and coastal systems. Frontiers in Marine Science, 6, (2019): 623, doi:10.3389/fmars.2019.00623.
    Description: Many coastal areas host rich marine ecosystems and are also centers of economic activities, including fishing, shipping and recreation. Due to the socioeconomic and ecological importance of these areas, predicting relevant indicators of the ecosystem state on sub-seasonal to interannual timescales is gaining increasing attention. Depending on the application, forecasts may be sought for variables and indicators spanning physics (e.g., sea level, temperature, currents), chemistry (e.g., nutrients, oxygen, pH), and biology (from viruses to top predators). Many components of the marine ecosystem are known to be influenced by leading modes of climate variability, which provide a physical basis for predictability. However, prediction capabilities remain limited by the lack of a clear understanding of the physical and biological processes involved, as well as by insufficient observations for forecast initialization and verification. The situation is further complicated by the influence of climate change on ocean conditions along coastal areas, including sea level rise, increased stratification, and shoaling of oxygen minimum zones. Observations are thus vital to all aspects of marine forecasting: statistical and/or dynamical model development, forecast initialization, and forecast validation, each of which has different observational requirements, which may be also specific to the study region. Here, we use examples from United States (U.S.) coastal applications to identify and describe the key requirements for an observational network that is needed to facilitate improved process understanding, as well as for sustaining operational ecosystem forecasting. We also describe new holistic observational approaches, e.g., approaches based on acoustics, inspired by Tara Oceans or by landscape ecology, which have the potential to support and expand ecosystem modeling and forecasting activities by bridging global and local observations.
    Description: This study was supported by the NOAA’s Climate Program Office’s Modeling, Analysis, Predictions, and Projections (MAPP) Program through grants NA17OAR4310106, NA17OAR4310104, NA17OAR4310108, NA17OAR4310109, NA17OAR4310110, NA17OAR4310111, NA17OAR4310112, and NA17OAR4310113. This manuscript is a product of the NOAA/MAPP Marine Prediction Task Force. The Tara Oceans consortium acknowledges support from the CNRS Research Federation FR2022 Global Ocean Systems Ecology and Evolution, and OCEANOMICS (grant agreement ‘Investissement d’Avenir’ ANR-11-BTBR-0008). This is article number 95 of the Tara Oceans consortium. MK and SD acknowledge support from NASA grant NNX14AP62A “National Marine Sanctuaries as Sentinel Sites for a Demonstration Marine Biodiversity Observation Network (MBON)” funded under the National Ocean Partnership Program (NOPP RFP NOAA-NOS-IOOS-2014-2003803 in partnership between NOAA, BOEM, and NASA), and the NOAA Integrated Ocean Observing System (IOOS) Program Office. WC, IO, and AH acknowledge partial support from the Joint Institute for the Study of the Atmosphere and Ocean (JISAO) under NOAA Cooperative Agreement NA15OAR4320063, Contribution No. 2019-1029. This study received support from the European H2020 International Cooperation project MESOPP (Mesopelagic Southern Ocean Prey and Predators), grant agreement no. 692173.
    Keywords: Marine ecosystems ; Modeling and forecasting ; Seascapes ; Genetics ; Acoustics
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  • 5
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Marine Science 5 (2018): 158, doi:10.3389/fmars.2018.00158.
    Description: In autumn 2015, several sources reported observations of large amounts of gelatinous material in a large north Norwegian fjord system, either caught when trawling for other organisms or fouling fishing gear. The responsible organism was identified as a physonect siphonophore, Nanomia cara, while a ctenophore, Beroe cucumis, and a hydromedusa, Modeeria rotunda, were also registered in high abundances on a couple of occasions. To document the phenomena, we have compiled a variety of data from concurrent fisheries surveys and local fishermen, including physical samples, trawl catch, and acoustic data, photo and video evidence, and environmental data. Because of the gas-filled pneumatophore, characteristic for these types of siphonophores, acoustics provided detailed and unique insight to the horizontal and vertical distribution and potential abundances (~0.2–20 colonies·m−3) of N. cara with the highest concentrations observed in the near bottom region at ~320 m depth in the study area. This suggests that these animals were retained and accumulated in the deep basins of the fjord system possibly blooming here because of favorable environmental conditions and potentially higher prey availability compared to the shallower shelf areas to the north. Few cues as to the origin and onset of the bloom were found, but it may have originated from locally resident siphonophores. The characteristics of the deep-water masses in the fjord basins were different compared to the deep water outside the fjord system, suggesting no recent deep-water import to the fjords. However, water-masses containing siphonophores (not necessarily very abundant), may have been additionally introduced to the fjords at intermediate depths, with the animals subsequently trapped in the deeper fjord basins. The simultaneous observations of abundant siphonophores, hydromedusae, and ctenophores in the Lyngen-Kvænangen fjord system are intriguing, but difficult to provide a unified explanation for, as the organisms differ in their biology and ecology. Nanomia and Beroe spp. are holopelagic, while M. rotunda has a benthic hydroid stage. The species also have different trophic ecologies and dietary preferences. Only by combining information from acoustics, trawling, genetics, and local fishermen, were the identity, abundance, and the vertical and horizontal distribution of the physonect siphonophore, N. cara, established.
    Description: The work was funded by the Ministry of Fisheries and Coastal Affairs through the Institute of Marine Research (IMR), while the Research Council of Norway (RCN) is thanked for the financial support through the project The Arctic Ocean Ecosystem—(SI_ARCTIC, RCN 228896). AH was supported by the Norwegian Taxonony Initiative (NTI 70184233) and ForBio Research School funding (RCN 248799 and NTI 70184215).
    Keywords: Jellyfish bloom ; Genetics ; Acoustics ; Nanomia ; North Norwegian fjords ; Gelatinous zooplankton
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  • 6
    Publication Date: 2022-05-26
    Description: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Marine Science 4 (2017): 332, doi:10.3389/fmars.2017.00332.
    Description: While sound scattering layers (SSLs) have been described previously from ice-covered waters in the Arctic, the existence of a viable mesopelagic community that also includes mesopelagic fishes in the Arctic has been questioned. In addition, it has been hypothesized that vertical migration would hardly exist in these areas. We wanted to check if deep scattering layers (DSLs) was found to the west and north of Svalbard (79°30′N−82°10′N) during autumn 2015, and if present; whether organisms in such DSLs undertook vertical migrations. Our null hypothesis was that there would be no evidence of diel vertical migration. Multi-frequency acoustic observations by hull mounted echo sounder (18, 38, and 120 kHz) revealed a DSL at depths ~210–510 m in areas with bottom depths exceeding ~600 m. Investigating eight geographical locations that differed with respect to time periods, light cycle and sea ice conditions, we show that the deeper layer of DSL displayed a clear ascending movement during night time and a descending movement during daytime. The high-light weighted mean depth (WMD) (343–514 m) with respect to backscattered energy was statistically deeper than the low-light WMD (179–437 m) for the locations studied. This behavior of the DSL was found to be consistent both when the sun was continuously above the horizon and after it started to set on 1 September, and both in open water and sea ice covered waters. The WMD showed an increasing trend, while the nautical area backscattering strength from the DSL showed a decreasing trend from south to north among the studied locations. Hydrographic observations revealed that the diel migration was found in the lower part of the north-flowing Atlantic Water, and was disconnected from the surface water masses above the Atlantic Water during day and night. The organisms conducting vertical migrations were studied by vertical and oblique hauls with zooplankton nets and pelagic trawls. These data suggest that these organisms were mainly various mesopelagic fishes, some few larger fishes, large zooplankton like krill and amphipods, and various gelatinous forms.
    Description: The Research Council of Norway is thanked for the financial support through the projects “The Arctic Ocean Ecosystem” — (SI_ARCTIC, RCN 228896), the “Effects of climate change on the Calanus complex”—(ECCO, RCN 200508), “Harvesting marine cold water plankton species—abundance estimation and stock assessment”—(Harvest II, RCN 203871).
    Keywords: Arctic Ocean ; Deep scattering layer ; Diel vertical migration ; Mesopelagic organisms ; Acoustics
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  • 7
    Publication Date: 2022-05-25
    Description: © The Author(s), 2014. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Microbiology 5 (2014): 647, doi:10.3389/fmicb.2014.00647.
    Description: The Southern Ocean is currently subject to intense investigations, mainly related to its importance for global biogeochemical cycles and its alarming rate of warming in response to climate change. Microbes play an essential role in the functioning of this ecosystem and are the main drivers of the biogeochemical cycling of elements. Yet, the diversity and abundance of microorganisms in this system remain poorly studied, in particular with regards to changes along environmental gradients. Here, we used amplicon sequencing of 16S rRNA gene tags using primers covering both Bacteria and Archaea to assess the composition and diversity of the microbial communities from four sampling depths (surface, the maximum and minimum of the oxygen concentration, and near the seafloor) at 10 oceanographic stations located in Bransfield Strait [northwest of the Antarctic Peninsula (AP)] and near the sea ice edge (north of the AP). Samples collected near the seafloor and at the oxygen minimum exhibited a higher diversity than those from the surface and oxygen maximum for both bacterial and archaeal communities. The main taxonomic groups identified below 100 m were Thaumarchaeota, Euryarchaeota and Proteobacteria (Gamma-, Delta-, Beta-, and Alphaproteobacteria), whereas in the mixed layer above 100 m Bacteroidetes and Proteobacteria (mainly Alpha- and Gammaproteobacteria) were found to be dominant. A combination of environmental factors seems to influence the microbial community composition. Our results help to understand how the dynamic seascape of the Southern Ocean shapes the microbial community composition and set a baseline for upcoming studies to evaluate the response of this ecosystem to future changes.
    Description: This work was supported by the Brazilian National Counsel of Technological and Scientific Development (Polar Canion CNPq 556848/2009-8, ProOasis CNPq 565040/2010-3, Interbiota CNPq 407889/2013-2 and INCT-MAR-COI). Alex Enrich-Prast received a CNPq Productivity fellowship. Camila N. Signori was supported by a WHOI Mary Sears Visitor Award (for the microbial community analyses) and by the Brazilian Federal Agency for Support and Evaluation of Graduate Education (CAPES) for the “Doctorate Sandwich” scholarship (n. 18835/12-0).
    Keywords: Antarctica ; Pyrosequencing ; Microbial community structure ; Environmental factors ; Microbial oceanography ; Climate change
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  • 8
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Frontiers in Microbiology 6 (2015): 104, doi:10.3389/fmicb.2015.00104.
    Description: Soil microbes are major drivers of soil carbon cycling, yet we lack an understanding of how climate warming will affect microbial communities. Three ongoing field studies at the Harvard Forest Long-term Ecological Research (LTER) site (Petersham, MA) have warmed soils 5°C above ambient temperatures for 5, 8, and 20 years. We used this chronosequence to test the hypothesis that soil microbial communities have changed in response to chronic warming. Bacterial community composition was studied using Illumina sequencing of the 16S ribosomal RNA gene, and bacterial and fungal abundance were assessed using quantitative PCR. Only the 20-year warmed site exhibited significant change in bacterial community structure in the organic soil horizon, with no significant changes in the mineral soil. The dominant taxa, abundant at 0.1% or greater, represented 0.3% of the richness but nearly 50% of the observations (sequences). Individual members of the Actinobacteria, Alphaproteobacteria and Acidobacteria showed strong warming responses, with one Actinomycete decreasing from 4.5 to 1% relative abundance with warming. Ribosomal RNA copy number can obfuscate community profiles, but is also correlated with maximum growth rate or trophic strategy among bacteria. Ribosomal RNA copy number correction did not affect community profiles, but rRNA copy number was significantly decreased in warming plots compared to controls. Increased bacterial evenness, shifting beta diversity, decreased fungal abundance and increased abundance of bacteria with low rRNA operon copy number, including Alphaproteobacteria and Acidobacteria, together suggest that more or alternative niche space is being created over the course of long-term warming.
    Description: This work was supported by funding from the University of Massachusetts Amherst to DeAngelis and the National Science Foundation Long-term Ecological Research (LTER) Program.
    Keywords: Climate change ; Microbial ecology ; Ribosomal RNA ; rrn operon copy number ; Trophic strategy
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