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  • Elsevier  (124,811)
  • American Meteorological Society
  • Blackwell Publishing Ltd
  • MDPI Publishing
  • 2015-2019  (2)
  • 2010-2014  (130,800)
  • 2013  (130,800)
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  • 1
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Physics Letters B 294 (1992), S. 466-478 
    ISSN: 0370-2693
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Physics
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Amsterdam : Elsevier
    Physics Letters B 317 (1993), S. 474-484 
    ISSN: 0370-2693
    Source: Elsevier Journal Backfiles on ScienceDirect 1907 - 2002
    Topics: Physics
    Type of Medium: Electronic Resource
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  • 3
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    Elsevier
    In:  EPIC3Earth and Planetary Science Letters, Elsevier, 375, pp. 408-417, ISSN: 0012-821X
    Publication Date: 2014-06-25
    Description: The Miocene expansion of C4 plants (mainly tropical grasses) between 8 and 4 million years (Ma) remains an enigma since regional differences in the timing of the expansion rules out decreased CO2 (pCO2) as a dominant forcing [e.g. Tipple and Pagani, 2007. The early origins of terrestrial C4 photosynthesis. Annu. Rev. Earth Planet. Sci. 35, 435–461]. Other environmental factors, such as low-latitude aridity and seasonality have been proposed to explain the low tree versus grass ratio found in savannahs and tropical grasslands of the world, but conclusive evidence is missing. Here we use pollen and stable carbon (δ13C) and hydrogen (δD) isotope ratios of terrestrial plant wax from a South Atlantic sediment core (ODP Site 1085) to reconstruct Miocene to Pliocene changes of vegetation and rainfall regime of western southern Africa. Our results reveal changes in the relative amount of precipitation and indicate a shift of the main moisture source from the Atlantic to the Indian Ocean during the onset of a major aridification 8 Ma ago. We emphasize the importance of declining precipitation during the expansion of C4 and CAM (mainly succulent) vegetation in South Africa. We suggest that the C4 plant expansion resulted from an increased equator-pole temperature gradient caused by the initiation of strong Atlantic Meridional Overturning Circulation following the shoaling of the Central American Seaway during the Late Miocene.
    Repository Name: EPIC Alfred Wegener Institut
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  • 4
    Publication Date: 2019-07-17
    Repository Name: EPIC Alfred Wegener Institut
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  • 5
    Publication Date: 2017-06-14
    Description: Linear Pottery Culture (LBK) are investigated. These are interpreted as resulting from a combination of internal socio-economic processes as well as external environmental parameters. Resilience theory is helpful in understanding periods of increased vulnerability and inherent trends to social complexity. Cycles and threshold levels also help to understand why societies experience periods of increasing fragility and subsequent decline. Results are based on the correlation of a typology and dendrochronology-based archaeological chronology for western LBK and various palaeoclimatic proxy-data. The 14C-production curve is taken as an indicator for solar activity fluctuations, and an age model for laminated sediments as an indicator for rainfall fluctuations. We currently consider this correlation as agreeably robust; however future finedating may result in slight shifts within the archaeological chronology. According to the applied age model, the simple farming societies of the LBK (5600e4900 cal BC) in west-central Europe were not immediately and devastatingly affected by most climate fluctuations. Yet, they might have been one destabilising component within broader processes. However, periods of decreased or irregularly spaced rainfall are contemporaneous to periods of population decline, while periods of increased rainfall may have favoured population growth. Towards the end of the 6th millennium cal BC, the final years of LBK in western Central Europe are contemporaneous to a general trend to less rainfall punctuated by short-term increases in precipitation. During this climatically highly volatile period LBK reaches its highest population rates and at the same time experiences a period of warfare. Thereafter population rates decline and LBK gradually vanishes from the archaeological record, being replaced by Middle Neolithic societies.
    Repository Name: EPIC Alfred Wegener Institut
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  • 6
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    Elsevier
    In:  EPIC3Quaternary Science Reviews, Elsevier, 80, pp. 1-28, ISSN: 02773791
    Publication Date: 2016-11-06
    Repository Name: EPIC Alfred Wegener Institut
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  • 7
    Publication Date: 2017-04-04
    Description: Global-scale variations in the climate system over the last half of the twentieth century. including long-term increases in global-mean near-surface temperatures. are consistent with concurrent human-induced emissions of radiatively active gases and aerosols. However, such consistency does not preclude the possible influence of other forcing agents, including internal modes of climate variability or unaccounted for aerosol effects. To test whether other unknown forcing agents may have contributed to multidecadal increases in global-mean near-surface temperatures from 1950 to 2000. data pertaining to observed changes in global-scale sea surface temperatures and observed changes in radiatively active atmospheric constituents are incorporated into numerical global climate models. Results indicate that the radiative forcing needed to produce the observed long-term trends in sea surface temperatures-and global-mean near-surface temperatures-is provided predominantly by known changes in greenhouse gases and aerosols. Further, results indicate that less than 10% of the long-term historical increase in global-mean near-surface temperatures over the last half of the twentieth century could have been the result of internal climate variability. In addition. they indicate that less than 25% of the total radiative forcing needed to produce the observed long-term trend in global-mean near-surface temperatures could have been provided by changes in net radiative forcing from unknown sources (either positive or negative). These results, which are derived from simple energy balance requirements. emphasize the important role humans have played in modifying the global climate over the last half of the twentieth century.
    Description: Published
    Description: 7163-7172
    Description: 3.7. Dinamica del clima e dell'oceano
    Description: JCR Journal
    Description: restricted
    Keywords: climate forcing ; temperature increase ; AGCM ; 01. Atmosphere::01.01. Atmosphere::01.01.02. Climate
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
    Publication Date: 2017-04-04
    Description: Co-injection of a conservative tracer during the geological sequestration of CO2 can imprint a marker to the injected gas that can be easily recognized during soil gas surveys in case of CO2 leakage from the reservoir toward the surface. In this work, an ultra-trace detection method, based on gas chromatography with electron capture detection for analyzing perfluorocarbon tracers (PFTs) in soil gas samples was optimized. Three totally fluorinated cycloalcane compounds consisting of five and six atom carbon rings were selected for this purpose. We evaluated the feasibility of collecting PFTs on adsorbent tube packed with a commercial graphitized carbon black (Carbotrap™ 100) sampling 2 L of soil gas. The sorbent tubes were then analyzed by using a two-stage thermal desorption process. The developed method allows to quickly determine these compounds at very low fL/L level, method identification limits ranged from 1.3 to 5.8 fL/L. Moreover, it shows good precision, evaluated by within-day and between-day studies. A preliminary survey of the PFT soil gas background concentrations, conducted by analyzing some soil gas samples collected in two different areas in Central Italy and in the Po Plain, ascertained the PFT background concentration lower than MIL.
    Description: Published
    Description: 60-64
    Description: 2.4. TTC - Laboratori di geochimica dei fluidi
    Description: JCR Journal
    Description: partially_open
    Keywords: Perfluorocarbon tracers; Soil gas; Carbon dioxide storage; Leakage monitoring; GC–ECD ; 04. Solid Earth::04.02. Exploration geophysics::04.02.01. Geochemical exploration
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 9
    Publication Date: 2017-04-04
    Description: Repeating volcano-tectonic (VT) earthquakes, taking place at Mt. Etna during 1999–2009,were detected and analyzed to investigate their behavior. We found 735 families amounting to 2479 VT earthquakes, representing ~38% of all the analyzed VT earthquakes. The number of VT earthquakes making up the families ranges from 2 to 23. Over 70% of the families comprise 2 or 3 VT earthquakes and only 20 families by more than 10 events. The occurrence lifetime is also highly variable ranging from some minutes to ten years. In particular, more than half of the families have a lifetime shorter than 0.5 day and only ~10% longer than 1 year. On the basis of these results, most of the detected families were considered “burst-type”, i.e., show swarm-like occurrence, and hence their origin cannot be explained by a temporally constant tectonic loading. Indeed, since the analyzed earthquakes take place in a volcanic area, the rocks are affected not only by tectonic stresses related to the fairly steady regional stress field but also by local stresses, caused by the volcano, such as magma batch intrusions/ movements and gravitational loading.We focused on the five groups of families characterized by the longest repeatability over time, namely high number of events and long lifetime, located in the north-eastern, eastern and southern flanks of the volcano. Unlike the first four groups, which similarly to most of the detected families show swarm-like VT occurrences, group “v”, located in the north-eastern sector, exhibits a more “tectonic” behavior with the events making up such a group spread over almost the entire analyzed period. It is clear how both occurrence and slip rates do not remain constant but vary over time, and such changes are time-related to the occurrence of the 2002–2003 eruption. Finally, by FPFIT algorithm a good agreement between directions identified by nodal planes and the earthquake epicentral distribution was generally found.
    Description: Published
    Description: 1223 – 1236
    Description: 1.4. TTC - Sorveglianza sismologica delle aree vulcaniche attive
    Description: JCR Journal
    Description: restricted
    Keywords: repeating earthquakes ; Etna ; 04. Solid Earth::04.06. Seismology::04.06.08. Volcano seismology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 10
    Publication Date: 2017-04-04
    Description: In this work the authors investigate possible changes in the distribution of heavy precipitation events under a warmer climate, using the results of a set of 20 climate models taking part in the Coupled Model Intercomparison Project phase 5 effort (CMIP5). Future changes are evaluated as the difference between the last four decades of the 21st and the 20th Century assuming the Representative Concentration Pathway RCP8.5 scenario. As a measure of the width of the right tail of the precipitation distribution, we use the difference between the 99th and the 90th percentiles. Despite a slight tendency to underestimate the observed heavy precipitation, the considered CMIP5 models well represent the observed patterns in terms of the ensemble average, during both summer and winter seasons for the 1997-2005 period. Future changes in average precipitation are consistentwith previous findings based on CMIP3 models. CMIP5 models show a projected increase for the end of the twenty-first century of the width of the right tail of the precipitation distribution, particularly pronounced over India, South East Asia, Indonesia and Central Africa during borealsummer, as well as over South America and southern Africa during boreal winter.
    Description: Published
    Description: 7902–7911
    Description: 3.7. Dinamica del clima e dell'oceano
    Description: JCR Journal
    Description: open
    Keywords: precipitation ; extreme events ; climate change ; 01. Atmosphere::01.01. Atmosphere::01.01.02. Climate
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 11
    Publication Date: 2017-04-04
    Description: The Geochemical Monitoring System II (GMSII)prototype was designed, assembled, tested and installed at the Acqua Difesa test site, near Belpasso (Catania).
    Description: Published
    Description: 273-306
    Description: 1.5. TTC - Sorveglianza dell'attività eruttiva dei vulcani
    Description: JCR Journal
    Description: restricted
    Keywords: Geochemical Monitoring System ; 01. Atmosphere::01.01. Atmosphere::01.01.07. Volcanic effects
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 12
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    Elsevier
    In:  EPIC3Encyclopedia of Quaternary Science. 2nd edition, Amsterdam, Elsevier, 11 p., pp. 542-552, ISBN: 978-0-444-53643-3
    Publication Date: 2020-09-25
    Description: Syngenetically frozen deposits that are fine-grained and ice-rich are widely distributed in lowlands of northeastern Siberia, Alaska and northwestern Canada. These late Pleistocene sediments are specific to this region summarized as Beringia, and have been termed 'Ice Complex' or 'Yedoma' in Siberia, and 'muck' in North America. Silt is their dominant material, but they also include abundant organic matter preserved in permafrost since the time of deposition. Vegetation and faunal reconstructions indicate that the sediments aggraded largely under a cryoxeric environment characterized by graminoid and forb-rich vegetation that supported a grazing megafauna population during the Pleistocene.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Inbook , peerRev
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  • 13
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    Elsevier
    In:  EPIC3Comparative Biochemistry and Physiology Part D: Genomics and Proteomics, Elsevier, 8(4), pp. 344 - 351, ISSN: 1744-117X
    Publication Date: 2016-08-17
    Description: Abstract Research investigating the genetic basis of physiological responses has significantly broadened our understanding of the mechanisms underlying organismic response to environmental change. However, genomic data are currently available for few taxa only, thus excluding physiological model species from this approach. In this study we report the transcriptome of the model organism Hyas araneus from Spitsbergen (Arctic). We generated 20,479 transcripts, using the 454 {GS} {FLX} sequencing technology in combination with an Illumina HiSeq sequencing approach. Annotation by Blastx revealed 7159 blast hits in the {NCBI} non-redundant protein database. The comparison between the spider crab H. araneus transcriptome and {EST} libraries of the European lobster Homarus americanus and the porcelain crab Petrolisthes cinctipes yielded 3229/2581 sequences with a significant hit, respectively. The clustering by the Markov Clustering Algorithm (MCL) revealed a common core of 1710 clusters present in all three species and 5903 unique clusters for H. araneus. The combined sequencing approaches generated transcripts that will greatly expand the limited genomic data available for crustaceans. We introduce the {MCL} clustering for transcriptome comparisons as a simple approach to estimate similarities between transcriptomic libraries of different size and quality and to analyze homologies within the selected group of species. In particular, we identified a large variety of reverse transcriptase (RT) sequences not only in the H. araneus transcriptome and other decapod crustaceans, but also sea urchin, supporting the hypothesis of a heritable, anti-viral immunity and the proposed viral fragment integration by host-derived {RTs} in marine invertebrates.
    Repository Name: EPIC Alfred Wegener Institut
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  • 14
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    Elsevier
    In:  EPIC3Progress in Oceanography, Elsevier, 112-11, pp. 38-48
    Publication Date: 2019-07-16
    Description: Coastal upwelling ecosystems are areas of high productivity and strong outgassing, where most gases, such as N2O and CH4, are produced in subsurface waters by anaerobic metabolisms. We describe seasonal CH4 variation as well as potential mechanisms producing CH4 in surface waters of the central Chile upwelling ecosystem (36°S). Surface waters were always supersaturated in CH4 (from 125% up to 550%), showing a clear seasonal signal triggered by wind driven upwelling processes (austral spring– summer period), that matched with the periods of high chlorophyll-a and dimethylsulfoniopropionate (DMSP) levels. Methane cycling experiments, with/without the addition of dimethylsulfide (including 13C-DMS) and acetylene (a nonspecific inhibitor of CH4 oxidation) along with monthly measurements of CH4, DMSP and other oceanographic variables revealed that DMS can be a CH4 precursor. Net CH4 cycling rates (control) fluctuated between -0.64 and 1.44 nmol L-1 d-1. After the addition of acetylene, CH4 cycling rates almost duplicated relative to the control, suggesting a strong methanotrophic activity. With a spike of DMS, the net CH4 cycling rate significantly increased relative to the acetylene and control treatment. Additionally, the d13C values of CH4 at the end of the incubations (after addition of 13C enriched-DMS) were changed, reaching -32‰ PDB compared to natural values between -44‰ and -46‰ PDB. These findings indicate that, in spite of the strong CH4 consumption by methanotrophs, this upwelling area is an important source of CH4 to the atmosphere. The effluxes are derived partially from in situ surface production and seem to be related to DMSP/DMS metabolism.
    Repository Name: EPIC Alfred Wegener Institut
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  • 15
    Publication Date: 2018-08-10
    Description: Abstract Radiocarbon and uranium-thorium dating results are presented from a genus of calcitic Antarctic cold-water octocorals (family Coralliidae), which were collected from the Marie Byrd Seamounts in the Amundsen Sea (Pacific sector of the Southern Ocean) and which to date have not been investigated geochemically. The geochronological results are set in context with solution and laser ablation-based element/Ca ratios (Li, B, Mg, Mn, Sr, Ba, U, Th). Octocoral radiocarbon ages on living corals are in excellent agreement with modern ambient deep-water �14C, while multiple samples of individual fossil coral specimens yielded reproducible radiocarbon ages. Provided that local radiocarbon reservoir ages can be derived for a given time, fossil Amundsen Sea octocorals should be reliably dateable by means of radiocarbon. In contrast to the encouraging radiocarbon findings, the uranium-series data are more difficult to interpret. The uranium concentration of these calcitic octocorals is an order of magnitude lower than in the aragonitic hexacorals that are conventionally used for geochronological investigations. While modern and Late Holocene octocorals yield initial δ234U in good agreement with modern seawater, our results reveal preferential inward diffusion of dissolved alpha-recoiled 234U and its impact on fossil coral δ234U. Besides alpha-recoil related 234U diffusion, high-resolution sampling of two fossil octocorals further demonstrates that diagenetic uranium mobility has offset apparent coral U-series ages. Combined with the preferential alpha-recoil 234U diffusion, this process has prevented fossil octocorals from preserving a closed system U-series calendar age for longer than a few thousand years. Moreover, several corals investigated contain significant initial thorium, which cannot be adequately corrected for because of an apparently variable initial 232Th/230Th. Our results demonstrate that calcitic cold-water corals are unsuitable for reliable U-series dating. Mg/Ca ratios within single octocoral specimens are internally strikingly homogeneous, and appear promising in terms of their response to ambient temperature. Magnesium/lithium ratios are significantly higher than usually observed in other deep marine calcifiers and for many of our studied corals are remarkably close to seawater compositions. Although this family of octocorals is unsuitable for glacial deep-water �14C reconstructions, our findings highlight some important differences between hexacoral (aragonitic) and octocoral (calcitic) biomineralisation. Calcitic octocorals could still be useful for trace element and some isotopic studies, such as reconstruction of ambient deep water neodymium isotope composition or pH, via boron isotopic measurements.
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  • 16
    Publication Date: 2018-08-10
    Description: The AND-1B drill core (1285 m-long) was recovered, inside the ANDRILL (ANtarctic geological DRILLing) Program, during the austral summer of 2006/07 from beneath the floating McMurdo Ice Shelf. Drilling recovered a stratigraphic succession of alternating diamictites, diatomites and volcaniclastic sediments spanning about the last 14 Ma. A core portion between 350 and 480 mbsf, including a 80 m-thick diatomite interval recording the early Pliocene warming event, was investigated in term of opal biogenic content and element geochemistry. Across the diatomite interval, in spite of the lithological uniformity, a fluctuating biogenic opal profile mirrors the δ18O record, testifying a decrease in productivity when temperature drops as a consequence of small glacial fluctuations. The comparison of biogenic opal data with Chaetoceros spp. abundances from Konfirst et al. (2012) documents alternations between periods of high primary productivity in stratified surface waters and of enhanced terrigenous input in ice-free conditions. Cluster analysis discriminates elements associated to terrigenous input from those subject to biogenic control. Further separation in sub-cluster was interpreted in term of different element response to changes in provenance but also to depositional/early diagenetic conditions at the seafloor. Whilst K and Ti are related to different sediment sources confirming previous studies from the same interval, V, Zn and, to a lesser extent, Fe, document reducing/anoxic conditions during the diatomites deposition (in particular in 400–460 mbsf interval). Mg, Sr and Mn contents are related to authigenic carbonate precipitation whilst Ba is interested by nonsteady-state processes leading to local peaks of barium below the sulphate-rich/sulphate-poor pore water boundary where generally the low degree of barite saturation is responsible for Ba remobilization. Such alteration in depositional dynamics, responsible of the precipitation of an oxygen-depleted barium phase, was probably induced by change in sedimentation rate and/or in palaeoenvironmental conditions.
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  • 17
    Publication Date: 2019-07-17
    Description: In recent years, a novel proxy for the past occurrence of Arctic sea ice has been proposed that is based on the variable marine sedimentary abundance of an organic geochemical lipid derived from sea ice diatoms in the spring. This lipid, termed IP25 (Ice Proxy with 25 carbon atoms), is a highly branched isoprenoid mono-unsaturated alkene that appears to be sufficiently stable in sediments to permit meaningful palaeo sea ice reconstructions to be carried out over short- to long-term timescales. Since the first proposed use of IP25 as a proxy for palaeo sea ice by Belt et al. (2007), a number of laboratories have measured this biomarker in Arctic sediments and it is anticipated that research activity in this area will increase further in the future. The content of this review is divided into a number of sections. Firstly, we describe the scientific basis for the IP25 proxy and its initial discovery in Arctic sea ice, sedimenting particles and sediments. Secondly, we summarise the relatively few studies that have, to date, concentrated on examining the factors that influence the production and fate of IP25 and we identify some areas of future research that need to be addressed in order to improve our understanding of IP25 data obtained from sedimentary analyses. What is clear at this stage, however, it that the presence of IP25 in Arctic marine sediments appears to represent a proxy measure of past seasonal sea ice rather than permanent or multi-year ice conditions. Thirdly, we highlight the importance of rigorous analytical identification and quantification of IP25, especially if measurements of this biomarker are going to be used for quantitative sea ice reconstructions, rather than qualitative analyses alone (presence/absence). Fourthly, we review some recent attempts to make the interpretations of IP25 biomarker data more detailed and quantitative by combining sedimentary abundances with those of phytoplankton- and other sea ice-derived biomarkers. Thus, the bases for the so-called PIP25 and DIP25 indices are described, together with an overview of potential limitations, concluding that investigations into the use of these indices needs further research before their full potential can be realised. In the final section, we provide a summary of IP25-based palaeo sea ice reconstruction case studies performed to date. These case studies cover different Arctic regions and timescales spanning decades to tens of thousands of years.
    Repository Name: EPIC Alfred Wegener Institut
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  • 18
    Publication Date: 2019-07-17
    Description: Cratons with their thick lithospheric roots can influence the thermal structure, and thus the convective flow, in the surrounding mantle. As mantle temperatures are hard to measure directly, depth variations in the mantle transition zone (MTZ) discontinuities are often employed as a proxy. Here, we use a large new data set of P-receiver functions to map the 410 km and 660 km discontinuities beneath the western edge of the East European Craton and adjacent Phanerozoic Europe across the most fundamental lithospheric boundary in Europe, the Trans-European Suture Zone (TESZ). We observe significantly shorter travel times for conversions from both MTZ discontinuities within the craton, caused by the high velocities of the cratonic root. By contrast, the differential travel time across the MTZ is normal to only slightly raised. This implies that any insulating effect of the cratonic keel does not reach the MTZ. In contrast to earlier observations in Siberia, we do not find any trace of a discontinuity at 520 km depth, which indicates a rather dry MTZ beneath the western edge of the craton. Within most of covered Phanerozoic Europe, the MTZ differential travel time is remarkably uniform and in agreement with standard Earth models. No widespread thermal effects of the various episodes of Caledonian and Variscan subduction that took place during the amalgamation of the continent remain. Only more recent tectonic events, related to Alpine subduction and Quarternary volcanism in the Eifel area, can be traced. While the East European craton shows no distinct imprint into the MTZ, we discover the signature of the TESZ in the MTZ in the form of a linear region of about 350 km width with a 1.5 s increase in differential travel time, which could either be caused by high water content or decreased temperature. Taking into account results of recent S-wave tomographies, raised water content in the MTZ cannot be the main cause for this observation. Accordingly, we explain the increase, equivalent to a 15 km thicker MTZ, by a temperature decrease of about 80 K. We discuss two alternative models for this temperature reduction, either a remnant of subduction or an indication of downwelling due to small-scale, edge-driven convection caused by the contrast in lithospheric thickness across the TESZ. Any subducted lithosphere found in the MTZ at this location is unlikely to be related to Variscan subduction along the TESZ, though, as Eurasia has moved significantly northward since the Variscan orogeny.
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  • 19
    Publication Date: 2019-07-17
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  • 20
    Publication Date: 2018-02-15
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  • 21
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    Elsevier
    In:  EPIC3The Encyclopedia of Quaternary Science, The Encyclopedia of Quaternary Science, Amsterdam, Elsevier, pp. 755-764
    Publication Date: 2014-04-15
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  • 22
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    Elsevier
    In:  EPIC3The Encyclopedia of Quaternary Science, The Encyclopedia of Quaternary Science, Elsevier, pp. 73-85
    Publication Date: 2014-04-15
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  • 23
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    Elsevier
    In:  EPIC3Deep Sea Research Part I: Oceanographic Research Papers, Elsevier, 76, pp. 66-84, ISSN: 09670637
    Publication Date: 2019-07-17
    Description: We use a 27 year long time series of repeated transient tracer observations to investigate the evolution of the ventilation timescales and the related content of anthropogenic carbon(Cant) in deep and bottom water in the Weddell Sea. This time series consists of chlorofluorocarbon (CFC) observations from 1984 to 2008 together with first combined CFC and sulphurhexafluoride (SF6) measurements from 2010/2011 along the Prime Meridian in the Antarctic Ocean and across the Weddell Sea. Applying the Transit Time Distribution (TTD) method we find that all deep water masses in the Weddell Sea have been continually growing older and getting less ventilated during the last 27years. The decline of the ventilation rate of Weddell Sea Bottom Water (WSBW) and Weddell Sea Deep Water (WSDW) along the Prime Meridian is in the order of 15–21%; the Warm Deep Water (WDW) ventilation rate declined much faster by 33%. About 88–94% of the age increase in WSBW near its source regions (1.8–2.4 years per year) is explained by the age increase of WDW (4.5 years per year). As a consequence of the aging, the Cant increase in the deep and bottom water formed in the Weddell Sea slowed down by 14–21% over the period of observations.
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  • 24
    Publication Date: 2014-04-17
    Description: A high input of lithogenic sediment from glaciers was assumed to be responsible for high Fe and Mn contents in the Antarctic soft shell clam Laternula elliptica at King George Island. Indeed, withdrawal experiments indicated a strong influence of environmental Fe concentrations on Fe contents in bivalve hemolymph, but no significant differences in hemolymph and tissue concentrations were found among two sites of high and lower input of lithogenic debris. Comparing Fe and Mn concentrations of porewater, bottom water, and hemolymph from sampling sites, Mn appears to be assimilated as dissolved species, whereas Fe apparently precipitates as ferrihydrite within the oxic sediment or bottom water layer prior to assimilation by the bivalve. Hence, we attribute the high variability of Fe and Mn accumulation in tissues of L. elliptica around Antarctica to differences in the geochemical environment of the sediment and the resulting Fe and Mn flux across the benthic boundary.
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  • 25
    Publication Date: 2019-07-17
    Description: Coral recruitment was assessed in highly diverse and economically important Spermonde Archipelago, a reef system subjected to land-based sources of siltation/pollution and destructive fishing, over a period of 2 years. Recruitment on settlement tiles reached up to 705 spat m�2 yr�1 and was strongest in the dry season (July–October), except off-shore, where larvae settled earlier. Pocilloporidae dominated nearshore, while a more diverse community of Acroporidae, Poritidae and others settled in the less polluted mid-shelf and off-shore reefs. Non-coral fouling community appeared to hardly influence initial coral settlement on the tiles, although, this does not necessarily infer low coral post-settlement mortality, which may be enhanced at the near- and off-shore reefs as indicated by increased abundances of potential space competitors on natural substrate. Blast fishing showed no local reduction in coral recruitment and live hard coral cover increased in oligotrophic reefs, indicating potential for coral recovery, if managed effectively.
    Repository Name: EPIC Alfred Wegener Institut
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  • 26
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2012. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Bulletin of the American Meteorological Society 93 (2012): 1547–1566, doi:10.1175/BAMS-D-11-00201.1.
    Description: The Geostationary Coastal and Air Pollution Events (GEO-CAPE) mission was recommended by the National Research Council's (NRC's) Earth Science Decadal Survey to measure tropospheric trace gases and aerosols and coastal ocean phytoplankton, water quality, and biogeochemistry from geostationary orbit, providing continuous observations within the field of view. To fulfill the mandate and address the challenge put forth by the NRC, two GEO-CAPE Science Working Groups (SWGs), representing the atmospheric composition and ocean color disciplines, have developed realistic science objectives using input drawn from several community workshops. The GEO-CAPE mission will take advantage of this revolutionary advance in temporal frequency for both of these disciplines. Multiple observations per day are required to explore the physical, chemical, and dynamical processes that determine tropospheric composition and air quality over spatial scales ranging from urban to continental, and over temporal scales ranging from diurnal to seasonal. Likewise, high-frequency satellite observations are critical to studying and quantifying biological, chemical, and physical processes within the coastal ocean. These observations are to be achieved from a vantage point near 95°–100°W, providing a complete view of North America as well as the adjacent oceans. The SWGs have also endorsed the concept of phased implementation using commercial satellites to reduce mission risk and cost. GEO-CAPE will join the global constellation of geostationary atmospheric chemistry and coastal ocean color sensors planned to be in orbit in the 2020 time frame.
    Description: Funding for GEO-CAPE definition activities is provided by the Earth Science Division of the National Aeronautics and Space Administration.
    Description: 2013-04-01
    Repository Name: Woods Hole Open Access Server
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  • 27
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 17–28, doi:10.1175/JPO-D-11-0108.1.
    Description: Observational evidence is presented for transfer of energy from the internal tide to near-inertial motions near 29°N in the Pacific Ocean. The transfer is accomplished via parametric subharmonic instability (PSI), which involves interaction between a primary wave (the internal tide in this case) and two smaller-scale waves of nearly half the frequency. The internal tide at this location is a complex superposition of a low-mode waves propagating north from Hawaii and higher-mode waves generated at local seamounts, making application of PSI theory challenging. Nevertheless, a statistically significant phase locking is documented between the internal tide and upward- and downward-propagating near-inertial waves. The phase between those three waves is consistent with that expected from PSI theory. Calculated energy transfer rates from the tide to near-inertial motions are modest, consistent with local dissipation rate estimates. The conclusion is that while PSI does befall the tide near a critical latitude of 29°N, it does not do so catastrophically.
    Description: This work was sponsored by NSF OCE 04-25283.
    Description: 2013-07-01
    Keywords: Diapycnal mixing ; Internal waves ; Nonlinear dynamics
    Repository Name: Woods Hole Open Access Server
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  • 28
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 418–431, doi:10.1175/JPO-D-12-087.1.
    Description: The overflow of the dense water mass across the Greenland–Scotland Ridge (GSR) from the Nordic Seas drives the Atlantic meridional overturning circulation (AMOC). The Nordic Seas is a large basin with an enormous reservoir capacity. The volume of the dense water above the GSR sill depth in the Nordic Seas, according to previous estimates, is sufficient to supply decades of overflow transport. This large capacity buffers overflow’s responses to atmospheric variations and prevents an abrupt shutdown of the AMOC. In this study, the authors use a numerical and an analytical model to show that the effective reservoir capacity of the Nordic Seas is actually much smaller than what was estimated previously. Basin-scale oceanic circulation is nearly geostrophic and its streamlines are basically the same as the isobaths. The vast majority of the dense water is stored inside closed geostrophic contours in the deep basin and thus is not freely available to the overflow. The positive wind stress curl in the Nordic Seas forces a convergence of the dense water toward the deep basin and makes the interior water even more removed from the overflow-feeding boundary current. Eddies generated by the baroclinic instability help transport the interior water mass to the boundary current. But in absence of a robust renewal of deep water, the boundary current weakens rapidly and the eddy-generating mechanism becomes less effective. This study indicates that the Nordic Seas has a relatively small capacity as a dense water reservoir and thus the overflow transport is sensitive to climate changes.
    Description: This study has been supported by National Science Foundation (OCE0927017,ARC1107412).
    Description: 2013-08-01
    Keywords: Bottom currents ; Drainage flow ; Meridional overturning circulation ; Ocean dynamics ; Potential vorticity ; Topographic effects
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  • 29
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 283–300, doi:10.1175/JPO-D-11-0240.1.
    Description: Motivated by the recent interest in ocean energetics, the widespread use of horizontal eddy viscosity in models, and the promise of high horizontal resolution data from the planned wide-swath satellite altimeter, this paper explores the impacts of horizontal eddy viscosity and horizontal grid resolution on geostrophic turbulence, with a particular focus on spectral kinetic energy fluxes Π(K) computed in the isotropic wavenumber (K) domain. The paper utilizes idealized two-layer quasigeostrophic (QG) models, realistic high-resolution ocean general circulation models, and present-generation gridded satellite altimeter data. Adding horizontal eddy viscosity to the QG model results in a forward cascade at smaller scales, in apparent agreement with results from present-generation altimetry. Eddy viscosity is taken to roughly represent coupling of mesoscale eddies to internal waves or to submesoscale eddies. Filtering the output of either the QG or realistic models before computing Π(K) also greatly increases the forward cascade. Such filtering mimics the smoothing inherent in the construction of present-generation gridded altimeter data. It is therefore difficult to say whether the forward cascades seen in present-generation altimeter data are due to real physics (represented here by eddy viscosity) or to insufficient horizontal resolution. The inverse cascade at larger scales remains in the models even after filtering, suggesting that its existence in the models and in altimeter data is robust. However, the magnitude of the inverse cascade is affected by filtering, suggesting that the wide-swath altimeter will allow a more accurate determination of the inverse cascade at larger scales as well as providing important constraints on smaller-scale dynamics.
    Description: BKA received support from Office of Naval Research Grant N00014-11-1-0487, National Science Foundation (NSF) Grants OCE-0924481 and OCE- 09607820, and University of Michigan startup funds. KLP acknowledges support from Woods Hole Oceanographic Institution bridge support funds. RBS acknowledges support from NSF grants OCE-0960834 and OCE-0851457, a contract with the National Oceanography Centre, Southampton, and a NASA subcontract to Boston University. JFS and JGR were supported by the projects ‘‘Global and remote littoral forcing in global ocean models’’ and ‘‘Agesotrophic vorticity dynamics of the ocean,’’ respectively, both sponsored by the Office of Naval Research under program element 601153N.
    Description: 2013-08-01
    Keywords: Eddies ; Nonlinear dynamics ; Ocean dynamics ; Satellite observations ; Ocean models
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  • 30
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 744–765, doi:10.1175/JPO-D-12-067.1.
    Description: This study investigates the coherence between ocean bottom pressure signals at the Rapid Climate Change programme (RAPID) West Atlantic Variability Experiment (WAVE) array on the western North Atlantic continental slope, including the Woods Hole Oceanographic Institution Line W. Highly coherent pressure signals propagate southwestward along the slope, at speeds in excess of 128 m s−1, consistent with expectations of barotropic Kelvin-like waves. Coherent signals are also evidenced in the smaller pressure differences relative to 1000-m depth, which are expected to be associated with depth-dependent basinwide meridional transport variations or an overturning circulation. These signals are coherent and almost in phase for all time scales from 3.6 years down to 3 months. Coherence is still seen at shorter time scales for which group delay estimates are consistent with a propagation speed of about 1 m s−1 over 990 km of continental slope but with large error bounds on the speed. This is roughly consistent with expectations for propagation of coastally trapped waves, though somewhat slower than expected. A comparison with both Eulerian currents and Lagrangian float measurements shows that the coherence is inconsistent with a propagation of signals by advection, except possibly on time scales longer than 6 months.
    Description: This work was funded by the U.K. Natural Environment Research Council. Sofia Olhede was supported by EPSRC Grant EP/I005250/1. Initial observations at StationW(2001–04) were made possible by a grant from the G. Unger Vetlesen Foundation and support from the Woods Hole Oceanographic Institution. Since 2004, the Line W program has been supported by the U.S. National Science Foundation with supplemental contribution from WHOIs Ocean and Climate Change Institute.
    Description: 2013-10-01
    Keywords: Atlantic Ocean ; Boundary currents ; Meridional overturning circulation ; Pressure ; Waves, oceanic ; In situ oceanic observations
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  • 31
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 2453–2466, doi:10.1175/JCLI-D-12-00023.1.
    Description: The North Atlantic Oscillation (NAO) is one of the most important modes of variability in the global climate system and is characterized by a meridional dipole in the sea level pressure field, with centers of action near Iceland and the Azores. It has a profound influence on the weather, climate, ecosystems, and economies of Europe, Greenland, eastern North America, and North Africa. It has been proposed that around 1980, there was an eastward secular shift in the NAO’s northern center of action that impacted sea ice export through Fram Strait. Independently, it has also been suggested that the location of its southern center of action is tied to the phase of the NAO. Both of these attributes of the NAO have been linked to anthropogenic climate change. Here the authors use both the one-point correlation map technique as well as empirical orthogonal function (EOF) analysis to show that the meridional dipole that is often seen in the sea level pressure field over the North Atlantic is not purely the result of the NAO (as traditionally defined) but rather arises through an interplay among the NAO and two other leading modes of variability in the North Atlantic region: the East Atlantic (EA) and the Scandinavian (SCA) patterns. This interplay has resulted in multidecadal mobility in the two centers of action of the meridional dipole since the late nineteenth century. In particular, an eastward movement of the dipole has occurred during the 1930s to 1950s as well as more recently. This mobility is not seen in the leading EOF of the sea level pressure field in the region.
    Description: GWKM was supported by the Natural Sciences and Engineering Research Council of Canada. IAR was supported in part by NE/C003365/1. RSP was supported by Grant OCE-0959381 from the U.S. National Science Foundation.
    Description: 2013-10-15
    Keywords: North Atlantic Ocean ; North Atlantic Oscillation ; Climate variability ; Climatology ; Empirical orthogonal functions
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  • 32
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2012. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 42 (2012): 2234–2253, doi:10.1175/JPO-D-12-033.1.
    Description: Meridional velocity, mass, and heat transport in the equatorial oceans are difficult to estimate because of the nonapplicability of the geostrophic balance. For this purpose a steady-state model is utilized in the equatorial Indian Ocean using NCEP wind stress and temperature and salinity data from the World Ocean Atlas 2005 (WOA05) and Argo. The results show a Somali Current flowing to the south during the winter monsoon carrying −11.5 ± 1.3 Sv (1 Sv ≡ 106 m3 s−1) and −12.3 ± 0.3 Sv from WOA05 and Argo, respectively. In the summer monsoon the Somali Current reverses to the north transporting 16.8 ± 1.2 Sv and 19.8 ± 0.6 Sv in the WOA05 and Argo results. Transitional periods are considered together and in consequence, there is not a clear Somali Current present in this period. Model results fit with in situ measurements made around the region, although Argo data results are quite more realistic than WOA05 data results.
    Description: This study has been partly funded by the MOC Project (CTM 2008- 06438) and the Spanish contribution to the Argo network (AC2009 ACI2009-0998), financed by the Spanish Government and Feder.
    Description: 2013-06-01
    Keywords: Indian Ocean ; Subtropics ; Currents ; Ocean circulation ; Transport ; Wind stress
    Repository Name: Woods Hole Open Access Server
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  • 33
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 2132–2141, doi:10.1175/JPO-D-12-0182.1.
    Description: Repeated occupations of two hydrographic sections in the southwest Pacific basin from the 1990s to 2000s track property changes of Antarctic Bottom Water (AABW). The largest property changes—warming, freshening, increase in total carbon, and decrease in oxygen—are found near the basin’s deep western boundary between 50° and 20°S. The magnitude of the property changes decreases with increasing distance from the western boundary. At the deep western boundary, analysis of the relative importance of AABW (γn 〉 28.1 kg m−3) freshening, heating, or isopycnal heave suggests that the deep ocean stratification change is the result of both warming and freshening processes. The consistent deep ocean changes near the western boundary of the southwest Pacific basin dispel the notion that the deep ocean is quiescent. High-latitude climate variability is being directly transmitted into the deep southwest Pacific basin and the global deep ocean through dynamic deep western boundary currents.
    Description: BMS, SEW, and BT were supported by the Australian Climate Change Science Program, funded jointly by the Department of Climate Change and Energy Efficiency and CSIRO. Funding for AM was provided through NOAA GrantNA110AR4310063.
    Description: 2014-04-01
    Keywords: Circulation/ Dynamics ; Waves ; Oceanic
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  • 34
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 1589–1610, doi:10.1175/JPO-D-12-0173.1.
    Description: This study investigates the exchange of momentum between the atmosphere and ocean using data collected from four oceanic field experiments. Direct covariance estimates of momentum fluxes were collected in all four experiments and wind profiles were collected during three of them. The objective of the investigation is to improve parameterizations of the surface roughness and drag coefficient used to estimate the surface stress from bulk formulas. Specifically, the Coupled Ocean–Atmosphere Response Experiment (COARE) 3.0 bulk flux algorithm is refined to create COARE 3.5. Oversea measurements of dimensionless shear are used to investigate the stability function under stable and convective conditions. The behavior of surface roughness is then investigated over a wider range of wind speeds (up to 25 m s−1) and wave conditions than have been available from previous oversea field studies. The wind speed dependence of the Charnock coefficient α in the COARE algorithm is modified to , where m = 0.017 m−1 s and b = −0.005. When combined with a parameterization for smooth flow, this formulation gives better agreement with the stress estimates from all of the field programs at all winds speeds with significant improvement for wind speeds over 13 m s−1. Wave age– and wave slope–dependent parameterizations of the surface roughness are also investigated, but the COARE 3.5 wind speed–dependent formulation matches the observations well without any wave information. The available data provide a simple reason for why wind speed–, wave age–, and wave slope–dependent formulations give similar results—the inverse wave age varies nearly linearly with wind speed in long-fetch conditions for wind speeds up to 25 m s−1.
    Description: This work was funded by the National Science Foundation Grant OCE04-24536 as part of the CLIVAR Mode Water Dynamics Experiment (CLIMODE) and the Office of Naval Research Grant N00014-05-1-0139 as part of the CBLAST-LOW program.
    Description: 2014-02-01
    Keywords: Wind shear ; Wind stress ; Atmosphere-ocean interaction ; Fluxes ; Momentum ; Algorithms
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  • 35
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Atmospheric and Oceanic Technology 30 (2013): 1767–1788, doi:10.1175/JTECH-D-12-00140.1.
    Description: Seismic images of oceanic thermohaline finestructure record vertical displacements from internal waves and turbulence over large sections at unprecedented horizontal resolution. Where reflections follow isopycnals, their displacements can be used to estimate levels of turbulence dissipation, by applying the Klymak–Moum slope spectrum method. However, many issues must be considered when using seismic images for estimating turbulence dissipation, especially sources of random and harmonic noise. This study examines the utility of seismic images for estimating turbulence dissipation in the ocean, using synthetic modeling and data from two field surveys, from the South China Sea and the eastern Pacific Ocean, including the first comparison of turbulence estimates from seismic images and from vertical shear. Realistic synthetic models that mimic the spectral characteristics of internal waves and turbulence show that reflector slope spectra accurately reproduce isopycnal slope spectra out to horizontal wavenumbers of 0.04 cpm, corresponding to horizontal wavelengths of 25 m. Using seismic reflector slope spectra requires recognition and suppression of shot-generated harmonic noise and restriction of data to frequency bands with signal-to-noise ratios greater than about 4. Calculation of slope spectra directly from Fourier transforms of the seismic data is necessary to determine the suitability of a particular dataset to turbulence estimation from reflector slope spectra. Turbulence dissipation estimated from seismic reflector displacements compares well to those from 10-m shear determined by coincident expendable current profiler (XCP) data, demonstrating that seismic images can produce reliable estimates of turbulence dissipation in the ocean, provided that random noise is minimal and harmonic noise is removed.
    Description: This work was funded by NSF Grants 0452744, 0405654, and 0648620, and ONR/DEPSCoR Grant DODONR40027.
    Description: 2014-02-01
    Keywords: Mixing ; Thermocline ; Acoustic measurements/effects
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  • 36
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Bulletin of the American Meteorological Society 94 (2013): 1131–1144, doi:10.1175/BAMS-D-12-00100.1.
    Description: The recent retreat and speedup of outlet glaciers, as well as enhanced surface melting around the ice sheet margin, have increased Greenland's contribution to sea level rise to 0.6 ± 0.1 mm yr−1 and its discharge of freshwater into the North Atlantic. The widespread, near-synchronous glacier retreat, and its coincidence with a period of oceanic and atmospheric warming, suggests a common climate driver. Evidence points to the marine margins of these glaciers as the region from which changes propagated inland. Yet, the forcings and mechanisms behind these dynamic responses are poorly understood and are either missing or crudely parameterized in climate and ice sheet models. Resulting projected sea level rise contributions from Greenland by 2100 remain highly uncertain. This paper summarizes the current state of knowledge and highlights key physical aspects of Greenland's coupled ice sheet–ocean–atmosphere system. Three research thrusts are identified to yield fundamental insights into ice sheet, ocean, sea ice, and atmosphere interactions, their role in Earth's climate system, and probable trajectories of future changes: 1) focused process studies addressing critical glacier, ocean, atmosphere, and coupled dynamics; 2) sustained observations at key sites; and 3) inclusion of relevant dynamics in Earth system models. Understanding the dynamic response of Greenland's glaciers to climate forcing constitutes both a scientific and technological frontier, given the challenges of obtaining the appropriate measurements from the glaciers' marine termini and the complexity of the dynamics involved, including the coupling of the ocean, atmosphere, glacier, and sea ice systems. Interdisciplinary and international cooperation are crucial to making progress on this novel and complex problem.
    Description: 2014-02-01
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  • 37
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2012. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 42 (2012): 2143–2152, doi:10.1175/JPO-D-12-027.1.
    Description: Direct measurements of turbulence levels in the Drake Passage region of the Southern Ocean show a marked enhancement over the Phoenix Ridge. At this site, the Antarctic Circumpolar Current (ACC) is constricted in its flow between the southern tip of South America and the northern tip of the Antarctic Peninsula. Observed turbulent kinetic energy dissipation rates are enhanced in the regions corresponding to the ACC frontal zones where strong flow reaches the bottom. In these areas, turbulent dissipation levels reach 10−8 W kg−1 at abyssal and middepths. The mixing enhancement in the frontal regions is sufficient to elevate the diapycnal turbulent diffusivity acting in the deep water above the axis of the ridge to 1 × 10−4 m2 s−1. This level is an order of magnitude larger than the mixing levels observed upstream in the ACC above smoother bathymetry. Outside of the frontal regions, dissipation rates are O(10−10) W kg−1, comparable to the background levels of turbulence found throughout most mid- and low-latitude regions of the global ocean.
    Description: This work was supported by the U.S. National Science Foundation and by the Natural Environment Research Council of the United Kingdom.
    Description: 2013-06-01
    Keywords: Southern Ocean ; Turbulence ; Diapycnal mixing
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  • 38
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    American Meteorological Society
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 698–705, doi:10.1175/JPO-D-12-0119.1.
    Description: Owing to the larger thermal expansion coefficient at higher temperatures, more buoyancy is put into the ocean by heating than is removed by cooling at low temperatures. The authors show that, even with globally balanced thermal and haline surface forcing at the ocean surface, there is a negative density flux and hence a positive buoyancy flux. As shown by McDougall and Garrett, this must be compensated by interior densification on mixing due to the nonlinearity of the equation of state (cabbeling). Three issues that arise from this are addressed: the estimation of the annual input of density forcing, the effects of the seasonal cycle, and the total cabbeling potential of the ocean upon complete mixing. The annual expansion through surface density forcing in a steady-state ocean driven by balanced evaporation–precipitation–runoff (E–P–R) and net radiative budget at the surface Qnet is estimated as 74 000 m3 s−1 (0.07 Sv; 1 Sv ≡ 106 m3 s−1), which would be equivalent to a sea level rise of 6.3 mm yr−1. This is equivalent to approximately 3 times the estimated rate of sea level rise or 450% of the average Mississippi River discharge. When seasonal variations are included, this density forcing increases by 35% relative to the time-mean case to 101 000 m3 s−1 (0.1 Sv). Likely bounds are established on these numbers by using different Qnet and E–P–R datasets and the estimates are found to be robust to a factor of ~2. These values compare well with the cabbeling-induced contraction inferred from independent thermal dissipation rate estimates. The potential sea level decrease upon complete vertical mixing of the ocean is estimated as 230 mm. When horizontal mixing is included, the sea level drop is estimated as 300 mm.
    Description: The authors would like to acknowledge support from the National Aeronautics and Space Administration, Grant NNX12AF59G and the National Science Foundation, Grant OCE-0647949.
    Description: 2013-10-01
    Keywords: Buoyancy ; Conservation equations ; Diapycnal mixing ; Heating ; Mixing ; Heat budgets/fluxes
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  • 39
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2012. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 42 (2012): 2206–2228, doi:10.1175/JPO-D-11-0191.1.
    Description: This study investigates the anisotropic properties of the eddy-induced material transport in the near-surface North Atlantic from two independent datasets, one simulated from the sea surface height altimetry and one derived from real-ocean surface drifters, and systematically examines the interactions between the mean- and eddy-induced material transport in the region. The Lagrangian particle dispersion, which is widely used to characterize the eddy-induced tracer fluxes, is quantified by constructing the “spreading ellipses.” The analysis consistently demonstrates that this dispersion is spatially inhomogeneous and strongly anisotropic. The spreading is larger and more anisotropic in the subtropical than in the subpolar gyre, and the largest ellipses occur in the Gulf Stream vicinity. Even at times longer than half a year, the spreading exhibits significant nondiffusive behavior in some parts of the domain. The eddies in this study are defined as deviations from the long-term time-mean. The contributions from the climatological annual cycle, interannual, and subannual (shorter than one year) variability are investigated, and the latter is shown to have the strongest effect on the anisotropy of particle spreading. The influence of the mean advection on the eddy-induced particle spreading is investigated using the “eddy-following-full-trajectories” technique and is found to be significant. The role of the Ekman advection is, however, secondary. The pronounced anisotropy of particle dispersion is expected to have important implications for distributing oceanic tracers, and for parameterizing eddy-induced tracer transfer in non-eddy-resolving models.
    Description: IR was supported by Grant NSF-OCE-0725796. IK would like to acknowledge support by the National Science foundation Grant OCE-0842834.
    Description: 2013-06-01
    Keywords: North Atlantic Ocean ; Diffusion ; Dispersion ; Eddies ; Lagrangian circulation/transport ; Trajectories
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  • 40
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 905–919, doi:10.1175/JPO-D-12-0150.1.
    Description: Interactions between vortices and a shelfbreak current are investigated, with particular attention to the exchange of waters between the continental shelf and slope. The nonlinear, three-dimensional interaction between an anticyclonic vortex and the shelfbreak current is studied in the laboratory while varying the ratio ε of the maximum azimuthal velocity in the vortex to the maximum alongshelf velocity in the shelfbreak current. Strong interactions between the shelfbreak current and the vortex are observed when ε 〉 1; weak interactions are found when ε 〈 1. When the anticyclonic vortex comes in contact with the shelfbreak front during a strong interaction, a streamer of shelf water is drawn offshore and wraps anticyclonically around the vortex. Measurements of the offshore transport and identification of the particle trajectories in the shelfbreak current drawn offshore from the vortex allow quantification of the fraction of the shelfbreak current that is deflected onto the slope; this fraction increases for increasing values of ε. Experimental results in the laboratory are strikingly similar to results obtained from observations in the Middle Atlantic Bight (MAB); after proper scaling, measurements of offshore transport and offshore displacement of shelf water for vortices in the MAB that span a range of values of ε agree well with laboratory predictions.
    Description: Laboratory work was supported by the National Science Foundation through Grant OCE- 0081756. Glider observations in March–April 2006 were supported by the National Science Foundation through Grant OCE-0220769. Glider observations in July– October 2007 were supported by a grant from Raytheon. RET was supported by the Postdoctoral Scholar Program at the Woods Hole Oceanographic Institution, with funding provided by the Cooperative Institute for the North Atlantic Region. The REMUS observations were funded by the Office of Naval Research. GGG was supported by the National Science Foundation through Grant OCE-1129125 for analysis and writing.
    Description: 2013-11-01
    Keywords: Continental shelf/slope ; Eddies ; Fronts ; Transport ; Laboratory/physical models
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  • 41
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Atmospheric and Oceanic Technology 30 (2013): 1576–1582, doi:10.1175/JTECH-D-12-00204.1.
    Description: Onset's HOBO U22 Water Temp Pros are small, reliable, relatively inexpensive, self-contained temperature loggers that are widely used in studies of oceans, lakes, and streams. An in-house temperature bath calibration of 158 Temp Pros indicated root-mean-square (RMS) errors ranging from 0.01° to 0.14°C, with one value of 0.23°C, consistent with the factory specifications. Application of a quadratic calibration correction substantially reduced the RMS error to less than 0.009°C in all cases. The primary correction was a bias error typically between −0.1° and 0.15°C. Comparison of water temperature measurements from Temp Pros and more accurate temperature loggers during two oceanographic studies indicates that calibrated Temp Pros have an RMS error of ~0.02°C throughout the water column at night and beneath the surface layer influenced by penetrating solar radiation during the day. Larger RMS errors (up to 0.08°C) are observed near the surface during the day due to solar heating of the black Temp Pro housing. Errors due to solar heating are significantly reduced by wrapping the housing with white electrical tape.
    Description: This work is based on research supported by Awards USA 00002 and KSA 00011 made by King Abdullah University of Science and Technology (KAUST) and by the Ocean Sciences Division of the National Science Foundation under Grant OCE- 0548961.
    Description: 2014-01-01
    Keywords: In situ oceanic observations ; Instrumentation/sensors
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  • 42
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 4447–4475, doi:10.1175/JCLI-D-12-00589.1.
    Description: Changes in atmospheric CO2 variability during the twenty-first century may provide insight about ecosystem responses to climate change and have implications for the design of carbon monitoring programs. This paper describes changes in the three-dimensional structure of atmospheric CO2 for several representative concentration pathways (RCPs 4.5 and 8.5) using the Community Earth System Model–Biogeochemistry (CESM1-BGC). CO2 simulated for the historical period was first compared to surface, aircraft, and column observations. In a second step, the evolution of spatial and temporal gradients during the twenty-first century was examined. The mean annual cycle in atmospheric CO2 was underestimated for the historical period throughout the Northern Hemisphere, suggesting that the growing season net flux in the Community Land Model (the land component of CESM) was too weak. Consistent with weak summer drawdown in Northern Hemisphere high latitudes, simulated CO2 showed correspondingly weak north–south and vertical gradients during the summer. In the simulations of the twenty-first century, CESM predicted increases in the mean annual cycle of atmospheric CO2 and larger horizontal gradients. Not only did the mean north–south gradient increase due to fossil fuel emissions, but east–west contrasts in CO2 also strengthened because of changing patterns in fossil fuel emissions and terrestrial carbon exchange. In the RCP8.5 simulation, where CO2 increased to 1150 ppm by 2100, the CESM predicted increases in interannual variability in the Northern Hemisphere midlatitudes of up to 60% relative to present variability for time series filtered with a 2–10-yr bandpass. Such an increase in variability may impact detection of changing surface fluxes from atmospheric observations.
    Description: The CESM project is supported by the National Science Foundation and the Office of Science (BER) of the U.S. Department of Energy. Computing resources were provided by the Climate Simulation Laboratory at NCAR’s Computational and Information Systems Laboratory (CISL), sponsored by the National Science Foundation and other agencies. G.K.A. acknowledges support of a NOAA Climate and Global Change postdoctoral fellowship. J.T.R., N.M.M., S.C.D., K.L., and J.K.M. acknowledge support of Collaborative Research: Improved Regional and Decadal Predictions of the Carbon Cycle (NSF AGS-1048827, AGS-1021776,AGS-1048890). TheHIPPO Programwas supported byNSF GrantsATM-0628575,ATM-0628519, and ATM-0628388 to Harvard University, University of California (San Diego), and by University Corporation for Atmospheric Research, University of Colorado/ CIRES, by the NCAR and by the NOAAEarth System Research Laboratory. Sunyoung Park, Greg Santoni, Eric Kort, and Jasna Pittman collected data during HIPPO. The ACME project was supported by the Office of Biological and Environmental Research of the U.S. Department of Energy under Contract DE-AC02- 05CH11231 as part of the Atmospheric Radiation Measurement Program (ARM), the ARM Aerial Facility, and the Terrestrial EcosystemScience Program. TCCON measurements at Eureka were made by the Canadian Network for Detection of Atmospheric Composition Change (CANDAC) with additional support from the Canadian Space Agency. The Lauder TCCON program was funded by the New Zealand Foundation for Research Science and Technology contracts CO1X0204, CO1X0703, and CO1X0406. Measurements at Darwin andWollongong were supported by Australian Research Council Grants DP0879468 and DP110103118 and were undertaken by David Griffith, Nicholas Deutscher, and Ronald Macatangay. We thank Pauli Heikkinen, Petteri Ahonen, and Esko Kyr€o of the Finnish Meteorological Institute for contributing the Sodankyl€a TCCON data. Measurements at Park Falls, Lamont, and Pasadena were supported byNASAGrant NNX11AG01G and the NASA Orbiting Carbon Observatory Program. Data at these sites were obtained by Geoff Toon, Jean- Francois Blavier, Coleen Roehl, and Debra Wunch.
    Description: 2014-01-01
    Keywords: Carbon cycle ; Carbon dioxide ; Aircraft observations ; In situ atmospheric observations ; Remote sensing ; Tracers
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  • 43
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Geochimica et Cosmochimica Acta 123 (2013): 322–337, doi:10.1016/j.gca.2013.06.011.
    Description: Despite the importance of diatoms in regulating climate and the existence of large opal-containing sediments in key air-ocean exchange areas, most geochemical proxy records are based on carbonates. Among them, Boron (B) content and isotopic composition have been widely used to reconstruct pH from foraminifera and coral fossils. We assessed the possibility of a pH/CO2 seawater concentration control on B content in diatom opal to determine whether or not frustule B concentrations could be used as a pH proxy or to clarify algae physiological responses to acidifying pH. We cultured two well-studied diatom species, Thalassiosira pseudonana and Thalassiosira weissflogii at varying pH conditions and determined Si and C quotas. Frustule B content was measured by both laser-ablation inductively coupled mass spectrometry (LA-ICPMS) and secondary ion mass spectrometry (SIMS/ion probe). For both species, frustules grown at higher pH have higher B contents and higher Si requirements per fixed C. If this trend is representative of diatom silicification in a future more acidic ocean, it could contribute to changes in the efficiency of diatom ballasting and C export, as well as changes in the contribution of diatoms relative to other phytoplankton groups in Si-limited regions. If B enters the cell through the same transporter employed for HCO3− uptake, an increased HCO3− requirement with decreasing CO2 concentrations (higher pH), and higher B(OH)4/HCO3− ratios would explain the observed increase in frustule B content with increasing pH. The mechanism of B transport from the site of uptake to the site of silica deposition is unknown, but may occur via silicon transport vesicles, in which B(OH)4− may be imported for B detoxification and/or as part of a pH regulation strategy either though Na-dependent B(OH)4−/Cl− antiport or B(OH)4−/H+ antiport. B deposition in the silica matrix may occur via substitution of a B(OH)4− for a negatively charged SiO− formed during silicification. With the current analytical precision, B content of frustules is unlikely to resolve ocean pH with a precision of paleoceanographic interest. However, if frustule B content was controlled mainly by HCO3− uptake for photosynthesis, which appears to show a threshold behavior, then measurements of B content might reveal the varying importance of active HCO3− acquisition mechanisms of diatoms in the past.
    Description: This work was funded by the European Community under the project ERC-STG-240222-PACE.
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  • 44
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2012. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 42 (2012): 2283–2296, doi:10.1175/JPO-D-11-0227.1.
    Description: The dynamic influence of thermohaline circulation on wind-driven circulation in the South China Sea (SCS) is studied using a simple reduced gravity model, in which the upwelling driven by mixing in the abyssal ocean is treated in terms of an upward pumping distributed at the base of the upper layer. Because of the strong upwelling of deep water, the cyclonic gyre in the northern SCS is weakened, but the anticyclonic gyre in the southern SCS is intensified in summer, while cyclonic gyres in both the southern and northern SCS are weakened in winter. For all seasons, the dynamic influence of thermohaline circulation on wind-driven circulation is larger in the northern SCS than in the southern SCS. Analysis suggests that the upwelling associated with the thermohaline circulation in the deep ocean plays a crucial role in regulating the wind-driven circulation in the upper ocean.
    Description: G. Wang is supported by the National Science Foundation of China (NSFC Grants 41125019, 40725017, and 40976017).D.Chen is supported by grants from the Ministry of Science and Technology (2010DFA21012), the State Oceanic Administration (201105018), and the NSFC (91128204).
    Description: 2013-06-01
    Keywords: Abyssal circulation ; Dynamics ; Ocean circulation ; Upwelling/downwelling
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  • 45
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 259–282, doi:10.1175/JPO-D-11-0194.1.
    Description: This study reports on observations of turbulent dissipation and internal wave-scale flow properties in a standing meander of the Antarctic Circumpolar Current (ACC) north of the Kerguelen Plateau. The authors characterize the intensity and spatial distribution of the observed turbulent dissipation and the derived turbulent mixing, and consider underpinning mechanisms in the context of the internal wave field and the processes governing the waves’ generation and evolution. The turbulent dissipation rate and the derived diapycnal diffusivity are highly variable with systematic depth dependence. The dissipation rate is generally enhanced in the upper 1000–1500 m of the water column, and both the dissipation rate and diapycnal diffusivity are enhanced in some places near the seafloor, commonly in regions of rough topography and in the vicinity of strong bottom flows associated with the ACC jets. Turbulent dissipation is high in regions where internal wave energy is high, consistent with the idea that interior dissipation is related to a breaking internal wave field. Elevated turbulence occurs in association with downward-propagating near-inertial waves within 1–2 km of the surface, as well as with upward-propagating, relatively high-frequency waves within 1–2 km of the seafloor. While an interpretation of these near-bottom waves as lee waves generated by ACC jets flowing over small-scale topographic roughness is supported by the qualitative match between the spatial patterns in predicted lee wave radiation and observed near-bottom dissipation, the observed dissipation is found to be only a small percentage of the energy flux predicted by theory. The mismatch suggests an alternative fate to local dissipation for a significant fraction of the radiated energy.
    Description: SW acknowledges the support of the Grantham Institute for Climate Change, Imperial College London. ACNG acknowledges the support of a NERC Advanced Research Fellowship (Grant NE/C517633/1). KLP acknowledges support from Woods Hole Oceanographic Institution bridge support funds.
    Description: 2013-08-01
    Keywords: Diapycnal mixing ; Internal waves ; Turbulence
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  • 46
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 766–789, doi:10.1175/JPO-D-12-0141.1.
    Description: Nonlinear energy transfers from the semidiurnal internal tide to high-mode, near-diurnal motions are documented near Kaena Ridge, Hawaii, an energetic generation site for the baroclinic tide. Data were collected aboard the Research Floating Instrument Platform (FLIP) over a 35-day period during the fall of 2002, as part of the Hawaii Ocean Mixing Experiment (HOME) Nearfield program. Energy transfer terms for a PSI resonant interaction at midlatitude are identified and compared to those for near-inertial PSI close to the M2 critical latitude. Bispectral techniques are used to demonstrate significant energy transfers in the Nearfield, between the low-mode M2 internal tide and subharmonic waves with frequencies near M2/2 and vertical wavelengths of O(120 m). A novel prefilter is used to test the PSI wavenumber resonance condition, which requires the subharmonic waves to propagate in opposite vertical directions. Depth–time maps of the interactions, formed by directly estimating the energy transfer terms, show that energy is transferred predominantly from the tide to subharmonic waves, but numerous reverse energy transfers are also found. A net forward energy transfer rate of 2 × 10−9 W kg−1 is found below 400 m. The suggestion is that the HOME observations of energy transfer from the tide to subharmonic waves represent a first step in the open-ocean energy cascade. Observed PSI transfer rates could account for a small but significant fraction of the turbulent dissipation of the tide within 60 km of Kaena Ridge. Further extrapolation suggests that integrated PSI energy transfers equatorward of the M2 critical latitude may be comparable to PSI energy transfers previously observed near 28.8°N.
    Description: This work was supported by the National Science Foundation and the Office of Naval Research.
    Description: 2013-10-01
    Keywords: Diapycnal mixing ; Energy transport ; Internal waves ; Nonlinear dynamics ; Topographic effects ; In situ oceanic observations
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  • 47
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 2833–2844, doi:10.1175/JCLI-D-12-00181.1.
    Description: The Community Climate System Model, version 4 (CCSM4) is used to assess the climate impact of wind-generated near-inertial waves (NIWs). Even with high-frequency coupling, CCSM4 underestimates the strength of NIWs, so that a parameterization for NIWs is developed and included into CCSM4. Numerous assumptions enter this parameterization, the core of which is that the NIW velocity signal is detected during the model integration, and amplified in the shear computation of the ocean surface boundary layer module. It is found that NIWs deepen the ocean mixed layer by up to 30%, but they contribute little to the ventilation and mixing of the ocean below the thermocline. However, the deepening of the tropical mixed layer by NIWs leads to a change in tropical sea surface temperature and precipitation. Atmospheric teleconnections then change the global sea level pressure fields so that the midlatitude westerlies become weaker. Unfortunately, the magnitude of the real air-sea flux of NIW energy is poorly constrained by observations; this makes the quantitative assessment of their climate impact rather uncertain. Thus, a major result of the present study is that because of its importance for global climate the uncertainty in the observed tropical NIW energy has to be reduced.
    Description: This research was funded as part of the Climate Process Team on internal wave-driven mixing with NSF Grant Nr E0968771 at NCAR.
    Description: 2013-11-01
    Keywords: Fronts ; Inertia-gravity waves ; Mesoscale processes ; Mixing ; Nonlinear dynamics
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  • 48
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    American Meteorological Society
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 1028–1041, doi:10.1175/JPO-D-12-0159.1.
    Description: The circulation induced by the interaction of surface Ekman transport with an island is considered using both numerical models and linear theory. The basic response is similar to that found for the interaction of Ekman layers and an infinite boundary, namely downwelling (upwelling) in narrow boundary layers and deformation-scale baroclinic boundary layers with associated strong geostrophic flows. The presence of the island boundary, however, allows the pressure signal to propagate around the island so that the regions of upwelling and downwelling are dynamically connected. In the absence of stratification the island acts as an effective barrier to the Ekman transport. The presence of stratification supports baroclinic boundary currents that provide an advective pathway from one side of the island to the other. The resulting steady circulation is quite complex. Near the island, both geostrophic and ageostrophic velocity components are typically large. The density anomaly is maximum below the surface and, for positive wind stress, exhibits an anticyclonic phase rotation with depth (direction of Kelvin wave propagation) such that anomalously warm water can lie below regions of Ekman upwelling. The horizontal and vertical velocities exhibit similar phase changes with depth. The addition of a sloping bottom can act to shield the deep return flow from interacting with the island and providing mass transport into/out of the surface Ekman layer. In these cases, the required transport is provided by a pair of recirculation gyres that connect the narrow upwelling/downwelling boundary layers on the eastern and western sides of the island, thus directly connecting the Ekman transport across the island.
    Description: This study was supported by the National Science Foundation under Grants OCE-0826656 and OCE-0959381 (MAS), and OCE-0925061 (JP).
    Description: 2013-11-01
    Keywords: Coastal flows ; Ekman pumping/transport ; Ocean dynamics
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  • 49
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 222–230, doi:10.1175/JPO-D-12-099.1.
    Description: Observations with fine horizontal resolution are used to identify the horizontal scales of variability over the Middle Atlantic Bight (MAB) shelf break and continental rise. Spray gliders collected observations along two alongshelf transects over the continental rise in March–April 2006 and along 16 cross-shelf transects over the shelf break and continental rise during July–October 2007. Horizontal resolution varied from 1 km or finer over the shelf to 6 km in deep water. These observations allow horizontal thermohaline variability offshore of the MAB shelf break to be examined for the first time. Structure functions of temperature and salinity, the mean square difference between observations separated by specified distances, reveal the horizontal spatial scales in the region. Exponential (e-folding) scales of temperature and salinity increase from 8–13 km near the shelf break to about 30 km over the continental rise. Just offshore of the shelf break, alongshelf structure functions exhibit periodicity with a 40–50-km wavelength that matches the wavelength of shelfbreak frontal meanders. Farther offshore, alongshelf structure functions suggest a dominant wavelength of 175–250 km, but these scales are only marginally resolved by the available observations. Examination of structure functions of along-isopycnal salinity (i.e., spice) suggests that interleaving of shelf and slope water masses contributes most of the horizontal variability near the MAB shelf break, but heaving of isopycnals is the primary source of horizontal variability over the continental rise.
    Description: Glider observations in March–April 2006 were supported by the National Science Foundation through Grant OCE-0220769. Glider observations in July–October 2007 were supported by a grant from Raytheon. RET was supported by the Postdoctoral Scholar Program at the Woods Hole Oceanographic Institution, with funding provided by the Cooperative Institute for the North Atlantic Region. GGG was supported by the National Science Foundation under Grant OCE-1129125.
    Description: 2013-07-01
    Keywords: Continental shelf/slope ; North Atlantic Ocean ; Fronts ; In situ oceanic observations ; Profilers, oceanic
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  • 50
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013]. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 6775–6800, doi:10.1175/JCLI-D-12-00184.1.
    Description: Ocean carbon uptake and storage simulated by the Community Earth System Model, version 1–Biogeochemistry [CESM1(BGC)], is described and compared to observations. Fully coupled and ocean-ice configurations are examined; both capture many aspects of the spatial structure and seasonality of surface carbon fields. Nearly ubiquitous negative biases in surface alkalinity result from the prescribed carbonate dissolution profile. The modeled sea–air CO2 fluxes match observationally based estimates over much of the ocean; significant deviations appear in the Southern Ocean. Surface ocean pCO2 is biased high in the subantarctic and low in the sea ice zone. Formation of the water masses dominating anthropogenic CO2 (Cant) uptake in the Southern Hemisphere is weak in the model, leading to significant negative biases in Cant and chlorofluorocarbon (CFC) storage at intermediate depths. Column inventories of Cant appear too high, by contrast, in the North Atlantic. In spite of the positive bias, this marks an improvement over prior versions of the model, which underestimated North Atlantic uptake. The change in behavior is attributable to a new parameterization of density-driven overflows. CESM1(BGC) provides a relatively robust representation of the ocean–carbon cycle response to climate variability. Statistical metrics of modeled interannual variability in sea–air CO2 fluxes compare reasonably well to observationally based estimates. The carbon cycle response to key modes of climate variability is basically similar in the coupled and forced ocean-ice models; however, the two differ in regional detail and in the strength of teleconnections.
    Description: The CESM project is supported by the National Science Foundation and the Office of Science (BER) of the U.S. Department of Energy. SCD acknowledges support of Collaborative Research: Improved Regional and Decadal Predictions of the Carbon Cycle (NSFAGS- 1048827).
    Description: 2014-03-15
    Keywords: Carbon cycle ; Carbon dioxide ; Climate change ; Climate models ; Coupled models ; Oceanic chemistry
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  • 51
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 2546–2556, doi:10.1175/JCLI-D-12-00062.1.
    Description: Diurnal sea surface warming affects the fluxes of latent heat, sensible heat, and upwelling longwave radiation. Diurnal warming most typically reaches maximum values of 3°C, although very localized events may reach 7°–8°C. An analysis of multiple years of diurnal warming over the global ice-free oceans indicates that heat fluxes determined by using the predawn sea surface temperature can differ by more than 100% in localized regions over those in which the sea surface temperature is allowed to fluctuate on a diurnal basis. A comparison of flux climatologies produced by these two analyses demonstrates that significant portions of the tropical oceans experience differences on a yearly average of up to 10 W m−2. Regions with the highest climatological differences include the Arabian Sea and the Bay of Bengal, as well as the equatorial western and eastern Pacific Ocean, the Gulf of Mexico, and the western coasts of Central America and North Africa. Globally the difference is on average 4.45 W m−2. The difference in the evaporation rate globally is on the order of 4% of the total ocean–atmosphere evaporation. Although the instantaneous, year-to-year, and seasonal fluctuations in various locations can be substantial, the global average differs by less than 0.1 W m−2 throughout the entire 10-yr time period. A global heat budget that uses atmospheric datasets containing diurnal variability but a sea surface temperature that has removed this signal may be underestimating the flux to the atmosphere by a fairly constant value.
    Description: We acknowledge, with pleasure, NASA Physical Oceanography program support and the support of the NOAA Climate Data Records program. A. Bogdanoff was also supported by the NASA Graduate Student Researchers Program and the Department of Defense through the National Defense Science & Engineering Graduate (NDSEG) Fellowship Program.
    Description: 2013-10-15
    Keywords: Air-sea interaction ; Heat budgets/fluxes ; Moisture/moisture budget ; Surface fluxes ; Surface temperature
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  • 52
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 2719–2740, doi:10.1175/JCLI-D-12-00436.1.
    Description: The estimate of surface irradiance on a global scale is possible through radiative transfer calculations using satellite-retrieved surface, cloud, and aerosol properties as input. Computed top-of-atmosphere (TOA) irradiances, however, do not necessarily agree with observation-based values, for example, from the Clouds and the Earth’s Radiant Energy System (CERES). This paper presents a method to determine surface irradiances using observational constraints of TOA irradiance from CERES. A Lagrange multiplier procedure is used to objectively adjust inputs based on their uncertainties such that the computed TOA irradiance is consistent with CERES-derived irradiance to within the uncertainty. These input adjustments are then used to determine surface irradiance adjustments. Observations by the Atmospheric Infrared Sounder (AIRS), Cloud–Aerosol Lidar and Infrared Pathfinder Satellite Observations (CALIPSO), CloudSat, and Moderate Resolution Imaging Spectroradiometer (MODIS) that are a part of the NASA A-Train constellation provide the uncertainty estimates. A comparison with surface observations from a number of sites shows that the bias [root-mean-square (RMS) difference] between computed and observed monthly mean irradiances calculated with 10 years of data is 4.7 (13.3) W m−2 for downward shortwave and −2.5 (7.1) W m−2 for downward longwave irradiances over ocean and −1.7 (7.8) W m−2 for downward shortwave and −1.0 (7.6) W m−2 for downward longwave irradiances over land. The bias and RMS error for the downward longwave and shortwave irradiances over ocean are decreased from those without constraint. Similarly, the bias and RMS error for downward longwave over land improves, although the constraint does not improve downward shortwave over land. This study demonstrates how synergetic use of multiple instruments (CERES, MODIS, CALIPSO, CloudSat, AIRS, and geostationary satellites) improves the accuracy of surface irradiance computations.
    Description: The work was supported by theNASACERES and, in part, Energy Water Cycle Study (NEWS) projects.
    Description: 2013-11-01
    Keywords: Energy budget/balance ; Radiation budgets ; Radiative fluxes ; Radiative transfer
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  • 53
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 1611–1626, doi:10.1175/JPO-D-12-0204.1.
    Description: A new method is proposed for extrapolating subsurface velocity and density fields from sea surface density and sea surface height (SSH). In this, the surface density is linked to the subsurface fields via the surface quasigeostrophic (SQG) formalism, as proposed in several recent papers. The subsurface field is augmented by the addition of the barotropic and first baroclinic modes, whose amplitudes are determined by matching to the sea surface height (pressure), after subtracting the SQG contribution. An additional constraint is that the bottom pressure anomaly vanishes. The method is tested for three regions in the North Atlantic using data from a high-resolution numerical simulation. The decomposition yields strikingly realistic subsurface fields. It is particularly successful in energetic regions like the Gulf Stream extension and at high latitudes where the mixed layer is deep, but it also works in less energetic eastern subtropics. The demonstration highlights the possibility of reconstructing three-dimensional oceanic flows using a combination of satellite fields, for example, sea surface temperature (SST) and SSH, and sparse (or climatological) estimates of the regional depth-resolved density. The method could be further elaborated to integrate additional subsurface information, such as mooring measurements.
    Description: JW and AM were supported by NASA (NNX12AD47G) and NSF (OCE 0928617). JLM was supported by the Office of Naval Research and the Office of Science (BER), U.S. Department of Energy under DE-GF0205ER64119. GRF is supported by OCE-0752346 and JHL by NORSEE (Nordic Seas Eddy Exchanges) funded by the Norwegian Research Council.
    Description: 2014-02-01
    Keywords: Eddies ; Ocean dynamics ; Potential vorticity ; Surface pressure ; Surface temperature ; Inverse methods
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  • 54
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 9291–9312, doi:10.1175/JCLI-D-12-00566.1.
    Description: The authors compare Community Earth System Model results to marine observations for the 1990s and examine climate change impacts on biogeochemistry at the end of the twenty-first century under two future scenarios (Representative Concentration Pathways RCP4.5 and RCP8.5). Late-twentieth-century seasonally varying mixed layer depths are generally within 10 m of observations, with a Southern Ocean shallow bias. Surface nutrient and chlorophyll concentrations exhibit positive biases at low latitudes and negative biases at high latitudes. The volume of the oxygen minimum zones is overestimated. The impacts of climate change on biogeochemistry have similar spatial patterns under RCP4.5 and RCP8.5, but perturbation magnitudes are larger under RCP8.5. Increasing stratification leads to weaker nutrient entrainment and decreased primary and export production (〉30% over large areas). The global-scale decreases in primary and export production scale linearly with the increases in mean sea surface temperature. There are production increases in the high nitrate, low chlorophyll (HNLC) regions, driven by lateral iron inputs from adjacent areas. The increased HNLC export partially compensates for the reductions in non-HNLC waters (~25% offset). Stabilizing greenhouse gas emissions and climate by the end of this century (as in RCP4.5) will minimize the changes to nutrient cycling and primary production in the oceans. In contrast, continued increasing emission of CO2 (as in RCP8.5) will lead to reduced productivity and significant modifications to ocean circulation and biogeochemistry by the end of this century, with more drastic changes beyond the year 2100 as the climate continues to rapidly warm.
    Description: The CESM project is supported by the National Science Foundation and the Office of Science (BER) of the U.S. Department of Energy. S.C.D. acknowledges support of Collaborative Research: Improved Regional and Decadal Predictions of the Carbon Cycle (NSF AGS-1048827). This work was supported by NSF grants (ARC-0902045 and AGS-1021776 to Moore and AGS- 1048890 to Moore, Lindsay, and Doney).
    Description: 2014-06-01
    Keywords: Climate prediction ; Forecast verification/skill ; Climate models ; Ecological models ; Model evaluation/performance ; Ocean models
    Repository Name: Woods Hole Open Access Server
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  • 55
    Publication Date: 2022-05-25
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 9247–9290, doi:10.1175/JCLI-D-12-00593.1.
    Description: This is the second part of a three-part paper on North American climate in phase 5 of the Coupled Model Intercomparison Project (CMIP5) that evaluates the twentieth-century simulations of intraseasonal to multidecadal variability and teleconnections with North American climate. Overall, the multimodel ensemble does reasonably well at reproducing observed variability in several aspects, but it does less well at capturing observed teleconnections, with implications for future projections examined in part three of this paper. In terms of intraseasonal variability, almost half of the models examined can reproduce observed variability in the eastern Pacific and most models capture the midsummer drought over Central America. The multimodel mean replicates the density of traveling tropical synoptic-scale disturbances but with large spread among the models. On the other hand, the coarse resolution of the models means that tropical cyclone frequencies are underpredicted in the Atlantic and eastern North Pacific. The frequency and mean amplitude of ENSO are generally well reproduced, although teleconnections with North American climate are widely varying among models and only a few models can reproduce the east and central Pacific types of ENSO and connections with U.S. winter temperatures. The models capture the spatial pattern of Pacific decadal oscillation (PDO) variability and its influence on continental temperature and West Coast precipitation but less well for the wintertime precipitation. The spatial representation of the Atlantic multidecadal oscillation (AMO) is reasonable, but the magnitude of SST anomalies and teleconnections are poorly reproduced. Multidecadal trends such as the warming hole over the central–southeastern United States and precipitation increases are not replicated by the models, suggesting that observed changes are linked to natural variability.
    Description: The authors acknowledge the support of NOAA/Climate Program Office/Modeling, Analysis, Predictions and Projections (MAPP) program as part of the CMIP5 Task Force.
    Description: 2014-06-01
    Keywords: North America ; Regional effects ; Coupled models ; Decadal variability ; Interannual variability ; Intraseasonal variability
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  • 56
    Publication Date: 2015-01-22
    Description: Climatic hazards, such as severe droughts and floods, affect extensive areas across monsoon Asia and can have profound impacts on the populations of that region. The area surrounding Indonesia, including large portions of the eastern Indian Ocean and Java Sea, plays a key role in the global climate system because of the enormous heat and moisture exchange that occurs between the ocean and atmosphere there. Here, we evaluate the influence of rainfall variability on multiple tree-ring parameters of teak (Tectona grandis) trees growing in a lowland rain forest in Central Java (Indonesia). We assess the potential of, annually resolved, tree-ring width, stable carbon (δ13C) and oxygen (δ18O) isotope records to improve our understanding of the Asian monsoon variability. Climate response analysis with regional, monthly rainfall data reveals that all three tree-ring parameters are significantly correlated to rainfall, albeit during different monsoon seasons. Precipitation in the beginning of the rainy season (Sep–Nov) is important for tree-ring width, confirming previous studies. Compared to ring width, the stable isotope records possess a higher degree of common signal, especially during portions of the peak rainy season (δ13C: Dec–May; δ18O: Nov–Feb) and are negatively correlated to rainfall. In addition, tree-ring δ18O also responds positively to peak dry season rainfall, although the δ18O rainy season signal is stronger and more time-stable. The correlations of opposite sign reflect the distinct seasonal contrast of the δ18O signatures in rainfall (18OPre) during the dry (18O-enriched rain) and rainy (18O-depleted rain) seasons. This difference in 18OPre signal reflects the combination of two signals in the annual tree-ring δ18O record. Highly resolved intra-annual δ18O isotope analyses suggest that the signals of dry and rainy season can be distinguished clearly. Thereby reconstructions can improve our understanding of variations and trends of the hydrological cycle over the Indonesian archipelago.
    Repository Name: EPIC Alfred Wegener Institut
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  • 57
    Publication Date: 2019-07-16
    Description: This study presents a reconstruction of the Late Holocene climate in Kamchatka based on chironomid remains from a 332 cm long composite sediment core recovered from Dvuyurtochnoe Lake (Two-Yurts Lake, TYL) in central Kamchatka. The oldest recovered sediments date to about 4500 cal years BP. Chironomid head capsules from TYL reflect a rich and diverse fauna. An unknown morphotype of Tanytarsini, Tanytarsus type klein, was found in the lake sediments. Our analysis reveals four chironomid assemblage zones reflecting four different climatic periods in the Late Holocene. Between 4500 and 4000 cal years BP, the chironomid composition indicates a high lake level, well-oxygenated lake water conditions and close to modern temperatures (w13 �C). From 4000 to 1000 cal years BP, two consecutive warm intervals were recorded, with the highest reconstructed temperature reaching 16.8 �C between 3700 and 2800 cal years BP. Cooling trend, started around 1100 cal years BP led to low temperatures during the last stage of the Holocene. Comparison with other regional studies has shown that termination of cooling at the beginning of late Holocene is relatively synchronous in central Kamchatka, South Kurile, Bering and Japanese Islands and take place around 3700 cal years BP. From ca 3700 cal years BP to the last millennium, a newly strengthened climate continentality accompanied by general warming trend with minor cool excursions led to apparent spatial heterogeneity of climatic patterns in the region. Some timing differences in climatic changes reconstructed from chironomid record of TYL sediments and late Holocene events reconstructed from other sites and other proxies might be linked to differences in local forcing mechanisms or caused by the different degree of dating precision, the different temporal resolution, and the different sensitive responses of climate proxies to the climate variations. Further high-resolution stratigraphic studies in this region are needed to understand the spatially complex pattern of climate change in Holocene in Kamchatka and the surrounding region. �
    Repository Name: EPIC Alfred Wegener Institut
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  • 58
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 1841–1861, doi:10.1175/JPO-D-12-0231.1.
    Description: In this idealized numerical modeling study, the composition of residual sediment fluxes in energetic (e.g., weakly or periodically stratified) tidal estuaries is investigated by means of one-dimensional water column models, with some focus on the sediment availability. Scaling of the underlying dynamic equations shows dependence of the results on the Simpson number (relative strength of horizontal density gradient) and the Rouse number (relative settling velocity) as well as impacts of the Unsteadiness number (relative tidal frequency). Here, the parameter space given by the Simpson and Rouse numbers is mainly investigated. A simple analytical model based on the assumption of stationarity shows that for small Simpson and Rouse numbers sediment flux is down estuary and vice versa for large Simpson and Rouse numbers. A fully dynamic water column model coupled to a second-moment turbulence closure model allows to decompose the sediment flux profiles into contributions from the transport flux (product of subtidal velocity and sediment concentration profiles) and the fluctuation flux profiles (tidal covariance between current velocity and sediment concentration). Three different types of bottom sediment pools are distinguished to vary the sediment availability, by defining a time scale for complete sediment erosion. For short erosion times scales, the transport sediment flux may dominate, but for larger erosion time scales the fluctuation sediment flux largely dominates the tidal sediment flux. When quarter-diurnal components are added to the tidal forcing, up-estuary sediment fluxes are strongly increased for stronger and shorter flood tides and vice versa. The theoretical results are compared to field observations in a tidally energetic inlet.
    Description: Project funding was provided by the German Research Foundation (DFG) in the framework of the Project ECOWS (Role of Estuarine Circulation for Transport of Suspended Particulate Matter in the Wadden Sea, BU 1199/11) and by the German Federal Ministry of Research and Education in the framework of the Project PACE [The future of the Wadden Sea sediment fluxes: still keeping pace with sea level rise? (FKZ 03F0634A)].
    Description: 2014-03-01
    Keywords: Channel flows ; Coastal flows ; Mixing ; Transport ; Turbulence ; Single column models
    Repository Name: Woods Hole Open Access Server
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  • 59
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 1940–1958, doi:10.1175/JPO-D-13-020.1.
    Description: The spatial structure of the tidal and background circulation over the inner shelf south of Martha's Vineyard, Massachusetts, was investigated using observations from a high-resolution, high-frequency coastal radar system, paired with satellite SSTs and in situ ADCP velocities. Maximum tidal velocities for the dominant semidiurnal constituent increased from 5 to 35 cm s−1 over the 20-km-wide domain with phase variations up to 60°. A northeastward jet along the eastern edge and a recirculation region inshore dominated the annually averaged surface currents, along with a separate along-shelf jet offshore. Owing in part to this variable circulation, the spatial structure of seasonal SST anomalies had implications for the local heat balance. Cooling owing to the advective heat flux divergence was large enough to offset more than half of the seasonal heat gain owing to surface heat flux. Tidal stresses were the largest terms in the mean along- and across-shelf momentum equations in the area of the recirculation, with residual wind stress and the Coriolis term dominating to the west and south, respectively. The recirculation was strongest in summer, with mean winds and tidal stresses accounting for much of the differences between summer and winter mean circulation. Despite the complex bathymetry and short along-shelf spatial scales, a simple model of tidal rectification was able to recreate the features of the northeastward jet and match an estimate of the across-shelf structure of sea surface height inferred from the residual of the momentum analysis.
    Description: 2014-03-01
    Keywords: Coastal flows ; Momentum ; Sea surface temperature ; Tides ; Surface observations
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  • 60
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 1685–1701, doi:10.1175/JCLI-D-12-00267.1.
    Description: The influence of the atmospheric circulation on the winter air–sea heat fluxes over the northern Red Sea is investigated during the period 1985–2011. The analysis based on daily heat flux values reveals that most of the net surface heat exchange variability depends on the behavior of the turbulent components of the surface flux (the sum of the latent and sensible heat). The large-scale composite sea level pressure (SLP) maps corresponding to turbulent flux minima and maxima show distinct atmospheric circulation patterns associated with each case. In general, extreme heat loss (with turbulent flux lower than −400 W m−2) over the northern Red Sea is observed when anticyclonic conditions prevail over an area extending from the Mediterranean Sea to eastern Asia along with a recession of the equatorial African lows system. Subcenters of high pressure associated with this pattern generate the required steep SLP gradient that enhances the wind magnitude and transfers cold and dry air masses from higher latitudes. Conversely, turbulent flux maxima (heat loss minimization with values from −100 to −50 W m−2) are associated with prevailing low pressures over the eastern Mediterranean and an extended equatorial African low that reaches the southern part of the Red Sea. In this case, a smooth SLP field over the northern Red Sea results in weak winds over the area that in turn reduce the surface heat loss. At the same time, southerlies blowing along the main axis of the Red Sea transfer warm and humid air northward, favoring heat flux maxima.
    Description: The authors acknowledge the Red Sea Research Center (RSRC) at King Abdullah University for Science and Technology (KAUST) for kindly sponsoring this study. Amy Bower was supported by Awards USA 00002, KSA 00011, and KSA 00011/02 made by KAUST to the Woods Hole Oceanographic Institution.
    Description: 2013-09-01
    Keywords: Extreme events ; Air-sea interaction ; Forcing ; Surface fluxes ; Trends
    Repository Name: Woods Hole Open Access Server
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  • 61
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 26 (2013): 1669–1684, doi:10.1175/JCLI-D-12-00246.1.
    Description: Climate change west of the Antarctic Peninsula is the most rapid of anywhere in the Southern Hemisphere, with associated changes in the rates and distributions of freshwater inputs to the ocean. Here, results from the first comprehensive survey of oxygen isotopes in seawater in this region are used to quantify spatial patterns of meteoric water (glacial discharge and precipitation) separately from sea ice melt. High levels of meteoric water are found close to the coast, due to orographic effects on precipitation and strong glacial discharge. Concentrations decrease offshore, driving significant southward geostrophic flows (up to ~30 cm s−1). These produce high meteoric water concentrations at the southern end of the sampling grid, where collapse of the Wilkins Ice Shelf may also have contributed. Sea ice melt concentrations are lower than meteoric water and patchier because of the mobile nature of the sea ice itself. Nonetheless, net sea ice production in the northern part of the sampling grid is inferred; combined with net sea ice melt in the south, this indicates an overall southward ice motion. The survey is contextualized temporally using a decade-long series of isotope data from a coastal Antarctic Peninsula site. This shows a temporal decline in meteoric water in the upper ocean, contrary to expectations based on increasing precipitation and accelerating deglaciation. This is driven by the increasing occurrence of deeper winter mixed layers and has potential implications for concentrations of trace metals supplied to the euphotic zone by glacial discharge. As the regional freshwater system evolves, the continuing isotope monitoring described here will elucidate the ongoing impacts on climate and the ecosystem.
    Description: The Palmer LTER participants acknowledge Award 0823101 from the Organisms and Ecosystems program in NSF OPP
    Description: 2013-09-01
    Keywords: Southern Ocean ; Ocean circulation ; Freshwater ; Precipitation ; Snowmelt/icemelt ; Isotopic analysis
    Repository Name: Woods Hole Open Access Server
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  • 62
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Atmospheric and Oceanic Technology 39 (2013): 450–469, doi:10.1175/JTECH-D-12-00078.1.
    Description: A surface mooring was deployed in the Gulf Stream for 15 months to investigate the role of air–sea interaction in mode water formation and other processes. The accuracies of the near-surface meteorological and oceanographic measurements are investigated. In addition, the impacts of these measurement errors on the estimation and study of the air–sea fluxes in the Gulf Stream are discussed. Pre- and postdeployment calibrations together with in situ comparison between shipboard and moored sensors supported the identification of biases due to sensor drifts, sensor electronics, and calibration errors. A postdeployment field study was used to further investigate the performance of the wind sensors. The use of redundant sensor sets not only supported the filling of data gaps but also allowed an examination of the contribution of random errors. Air–sea fluxes were also analyzed and computed from both Coupled Ocean–Atmosphere Response Experiment (COARE) bulk parameterization and using direct covariance measurements. The basic conclusion is that the surface buoy deployed in the Gulf Stream to support air–sea interaction research was successful, providing an improved 15-month record of surface meteorology, upper-ocean variability, and air–sea fluxes with known accuracies. At the same time, the coincident deployment of mean meteorological and turbulent flux sensors proved to be a successful strategy to certify the validity of the bulk formula fluxes over the midrange of wind speeds and to support further work to address the present shortcomings of the bulk formula methods at the low and high wind speeds.
    Description: The National Science Foundation (Grant OCE04-24536) funded this work, as part of the CLIVAR Mode Water Dynamics Experiment (CLIMODE). The Vetlesen Foundation is also acknowledged for the early support of S. Bigorre.
    Description: 2013-09-01
    Keywords: Atmosphere-ocean interaction ; Buoy observations
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  • 63
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2013. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 43 (2013): 602–615, doi:10.1175/JPO-D-12-055.1.
    Description: The ocean interior stratification and meridional overturning circulation are largely sustained by diapycnal mixing. The breaking of internal tides is a major source of diapycnal mixing. Many recent climate models parameterize internal-tide breaking using the scheme of St. Laurent et al. While this parameterization dynamically accounts for internal-tide generation, the vertical distribution of the resultant mixing is ad hoc, prescribing energy dissipation to decay exponentially above the ocean bottom with a fixed-length scale. Recently, Polzin formulated a dynamically based parameterization, in which the vertical profile of dissipation decays algebraically with a varying decay scale, accounting for variable stratification using Wentzel–Kramers–Brillouin (WKB) stretching. This study compares two simulations using the St. Laurent and Polzin formulations in the Climate Model, version 2G (CM2G), ocean–ice–atmosphere coupled model, with the same formulation for internal-tide energy input. Focusing mainly on the Pacific Ocean, where the deep low-frequency variability is relatively small, the authors show that the ocean state shows modest but robust and significant sensitivity to the vertical profile of internal-tide-driven mixing. Therefore, not only the energy input to the internal tides matters, but also where in the vertical it is dissipated.
    Description: This work is a component of the Internal- Wave Driven Mixing Climate Process Team funded by the National Science Foundation Grant OCE-0968721 and the National Oceanic and Atmospheric Administration, U.S. Department of Commerce, Award NA08OAR4320752.
    Description: 2013-09-01
    Keywords: Diapycnal mixing ; Internal waves ; Subgrid-scale processes ; Ocean models ; Parameterization
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  • 64
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2012. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 25 (2012): 7781–7801, doi:10.1175/JCLI-D-11-00442.1.
    Description: Air–sea fluxes from the Community Climate System Model version 4 (CCSM4) are compared with the Coordinated Ocean-Ice Reference Experiment (CORE) dataset to assess present-day mean biases, variability errors, and late twentieth-century trend differences. CCSM4 is improved over the previous version, CCSM3, in both air–sea heat and freshwater fluxes in some regions; however, a large increase in net shortwave radiation into the ocean may contribute to an enhanced hydrological cycle. The authors provide a new baseline for assessment of flux variance at annual and interannual frequency bands in future model versions and contribute a new metric for assessing the coupling between the atmospheric and oceanic planetary boundary layer (PBL) schemes of any climate model. Maps of the ratio of CCSM4 variance to CORE reveal that variance on annual time scales has larger error than on interannual time scales and that different processes cause errors in mean, annual, and interannual frequency bands. Air temperature and specific humidity in the CCSM4 atmospheric boundary layer (ABL) follow the sea surface conditions much more closely than is found in CORE. Sensible and latent heat fluxes are less of a negative feedback to sea surface temperature warming in the CCSM4 than in the CORE data with the model’s PBL allowing for more heating of the ocean’s surface.
    Description: The CESM project is supported by the National Science Foundation and the Office of Science (BER) of the U.S. Department of Energy. S. Stevensonwas supported byNASAGrantNNX09A020H and B. Fox-Kemper by Grants NSF 0934737 and NASA NNX09AF38G.
    Description: 2013-05-15
    Keywords: Atmosphere-ocean interaction ; Boundary layer ; Sea surface temperature ; Climate models ; Coupled models ; Model evaluation/performance
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  • 65
    Publication Date: 2013-09-07
    Description: The aim of this study was to examine racial differences in long-term survival among hemodialysis patients after coronary artery bypass grafting (CABG). To our knowledge this has not been previously addressed in the literature. Black and white hemodialysis patients undergoing first-time, isolated CABG procedures between 1992 and 2011 were compared. Survival probabilities were computed using the Kaplan-Meier product-limit method and stratified by race. Hazard ratios (HR) and 95% confidence intervals (CI) were computed using a Cox regression model. A total of 207 (2%) patients were on hemodialysis at the time of CABG. White (n = 80) hemodialysis patients had significantly decreased 5-year survival compared with black (n = 127) patients (adjusted HR = 1.9, 95% CI = 1.2–2.8). Our finding provides useful outcome information for surgeons, primary care providers, and their patients.
    Print ISSN: 1661-7827
    Electronic ISSN: 1660-4601
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Medicine
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  • 66
    Publication Date: 2013-09-07
    Description: Background: Limited by data availability, most disease maps in the literature are for relatively large and subjectively-defined areal units, which are subject to problems associated with polygon maps. High resolution maps based on objective spatial units are needed to more precisely detect associations between disease and environmental factors. Method: We propose to use a Restricted and Controlled Monte Carlo (RCMC) process to disaggregate polygon-level location data to achieve mapping aggregate data at an approximated individual level. RCMC assigns a random point location to a polygon-level location, in which the randomization is restricted by the polygon and controlled by the background (e.g., population at risk). RCMC allows analytical processes designed for individual data to be applied, and generates high-resolution raster maps. Results: We applied RCMC to the town-level birth defect data for New Hampshire and generated raster maps at the resolution of 100 m. Besides the map of significance of birth defect risk represented by p-value, the output also includes a map of spatial uncertainty and a map of hot spots. Conclusions: RCMC is an effective method to disaggregate aggregate data. An RCMC-based disease mapping maximizes the use of available spatial information, and explicitly estimates the spatial uncertainty resulting from aggregation.
    Print ISSN: 1661-7827
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    Topics: Energy, Environment Protection, Nuclear Power Engineering , Medicine
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  • 67
    Publication Date: 2013-09-07
    Description: The predominant microorganisms in samples taken from shower heads in residences in the Korean city “N” were Stenotrophomonas maltophilia, Sphingomonas paucimobilis, Acidovorax temperans, and Microbacterium lacticum. Legionella was not detected in this case. The volatile organic compounds (VOCs) vinylacetate, NN-DMA, cis-1,2-dichloroethylene, epichlorohydrin, and styrene were measured in five types of plastic pipes: PVC, PB, PP, PE, and cPVC. The rate of multiplication of the heterotrophic plate count (HPC) attached on the copper pipe in contact with hot tap water was higher than the rate for the copper pipe in contact with cold tap water. Biofilm accumulation on stainless steel pipes with added acetate (3 mg/L) was 2.56 times higher than the non-supplemented condition. Therefore, the growth of HPC in the pipe system was affected by the type and availability of nutrients and depended on variables such as heating during the hot water supply.
    Print ISSN: 1661-7827
    Electronic ISSN: 1660-4601
    Topics: Energy, Environment Protection, Nuclear Power Engineering , Medicine
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  • 68
    Publication Date: 2013-09-07
    Description: Bile acid diarrhoea (BAD) is a common disease that requires expensive imaging to diagnose. We have tested the efficacy of a new method to identify BAD, based on the detection of differences in volatile organic compounds (VOC) in urine headspace of BAD vs. ulcerative colitis and healthy controls. A total of 110 patients were recruited; 23 with BAD, 42 with ulcerative colitis (UC) and 45 controls. Patients with BAD also received standard imaging (Se75HCAT) for confirmation. Urine samples were collected and the headspace analysed using an AlphaMOS Fox 4000 electronic nose in combination with an Owlstone Lonestar Field Asymmetric Ion Mobility Spectrometer (FAIMS). A subset was also tested by gas chromatography, mass spectrometry (GCMS). Linear Discriminant Analysis (LDA) was used to explore both the electronic nose and FAIMS data. LDA showed statistical differences between the groups, with reclassification success rates (using an n-1 approach) at typically 83%. GCMS experiments confirmed these results and showed that patients with BAD had two chemical compounds, 2-propanol and acetamide, that were either not present or were in much reduced quantities in the ulcerative colitis and control samples. We believe that this work may lead to a new tool to diagnose BAD, which is cheaper, quicker and easier that current methods.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 69
    Publication Date: 2013-09-07
    Description: This paper is a theoretical analysis of mirror tilt in a Michelson interferometer and its effect on the radiant flux over the active area of a rectangular photodetector or image sensor pixel. It is relevant to sensor applications using homodyne interferometry where these opto-electronic devices are employed for partial fringe counting. Formulas are derived for radiant flux across the detector for variable location within the fringe pattern and with varying wave front angle. The results indicate that the flux is a damped sine function of the wave front angle, with a decay constant of the ratio of wavelength to detector width. The modulation amplitude of the dynamic fringe pattern reduces to zero at wave front angles that are an integer multiple of this ratio and the results show that the polarity of the radiant flux changes exclusively at these multiples. Varying tilt angle causes radiant flux oscillations under an envelope curve, the frequency of which is dependent on the location of the detector with the fringe pattern. It is also shown that a fringe count of zero can be obtained for specific photodetector locations and wave front angles where the combined effect of fringe contraction and fringe tilt can have equal and opposite effects. Fringe tilt as a result of a wave front angle of 0.05° can introduce a phase measurement difference of 16° between a photodetector/pixel located 20 mm and one located 100 mm from the optical origin.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 70
    Publication Date: 2013-09-07
    Description: Various types of grafts have been traditionally used to restore damaged bones. In the late 1960s, a strong interest was raised in studying ceramics as potential bone grafts due to their biomechanical properties. A bit later, such synthetic biomaterials were called bioceramics. In principle, bioceramics can be prepared from diverse materials but this review is limited to calcium orthophosphate-based formulations only, which possess the specific advantages due to the chemical similarity to mammalian bones and teeth. During the past 40 years, there have been a number of important achievements in this field. Namely, after the initial development of bioceramics that was just tolerated in the physiological environment, an emphasis was shifted towards the formulations able to form direct chemical bonds with the adjacent bones. Afterwards, by the structural and compositional controls, it became possible to choose whether the calcium orthophosphate-based implants remain biologically stable once incorporated into the skeletal structure or whether they were resorbed over time. At the turn of the millennium, a new concept of regenerative bioceramics was developed and such formulations became an integrated part of the tissue engineering approach. Now calcium orthophosphate scaffolds are designed to induce bone formation and vascularization. These scaffolds are often porous and harbor different biomolecules and/or cells. Therefore, current biomedical applications of calcium orthophosphate bioceramics include bone augmentations, artificial bone grafts, maxillofacial reconstruction, spinal fusion, periodontal disease repairs and bone fillers after tumor surgery. Perspective future applications comprise drug delivery and tissue engineering purposes because calcium orthophosphates appear to be promising carriers of growth factors, bioactive peptides and various types of cells.
    Electronic ISSN: 1996-1944
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 71
    Publication Date: 2013-09-08
    Description: Publication date: Available online 7 September 2013 Source: FEBS Open Bio Author(s): Veronika Temml , Susanne Kuehnl , Daniela Schuster , Stefan Schwaiger , Hermann Stuppner , Dietmar Fuchs Mediterranean Carthamus tinctorius (Safflower) is used for treatment of inflammatory conditions and neuropsychiatric disorders. Recently C. tinctorius lignans arctigenin and trachelogenin but not matairesinol were described to interfere with the activity of tryptophan-degrading enzyme indoleamine 2,3-dioxygenase (IDO) in peripheral blood mononuclear cells in vitro . We examined a potential direct influence of compounds on IDO enzyme activity applying computational calculations based on 3D geometry of the compounds. The interaction pattern analysis and force field-based minimization was performed within LigandScout 3.03, the docking simulation with MOE 2011.10 using the X-ray crystal structure of IDO. Results confirm the possibility of an intense interaction of arctigenin and trachelogenin with the binding site of the enzyme, while matairesinol had no such effect.
    Electronic ISSN: 2211-5463
    Topics: Biology
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  • 72
    Publication Date: 2013-09-08
    Description: Publication date: Available online 7 September 2013 Source: FEBS Open Bio Author(s): Mitsuru Ishikawa , Jun Shiota , Yuta Ishibashi , Tomoyuki Hakamata , Shizuku Shoji , Mamoru Fukuchi , Masaaki Tsuda , Tomoaki Shirao , Yuko Sekino , Toshihisa Ohtsuka , Jay M. Baraban , Akiko Tabuchi Megakaryoblastic leukemia 1 (MKL1) is a member of the MKL family of serum response factor (SRF) coactivators. Here we have identified three rat MKL1 transcripts: two are homologues of mouse MKL1 transcripts, full-length MKL1 (FLMKL1) and basic, SAP, and coiled-coil domains (BSAC), the third is a novel transcript, M KL1- elo ngated d erivative of y ield (MELODY). These rat MKL1 transcripts are differentially expressed in a wide variety of tissues with highest levels in testis and brain. During brain development, these transcripts display differential patterns of expression. The FLMKL1 transcript encodes two isoforms that utilize distinct translation start sites. The longer form possesses three actin-binding RPXXXEL (RPEL) motifs and the shorter form, MKL1met only has two RPEL motifs. All four rat MKL1 isoforms, FLMKL1, BSAC, MKL1met and MELODY increased SRF-mediated transcription, but not CREB-mediated transcription. Accordingly, the differential expression of MKL1 isoforms may help fine-tune gene expression during brain development.
    Electronic ISSN: 2211-5463
    Topics: Biology
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  • 73
    Publication Date: 2013-09-11
    Description: In this study, a miniaturized high fundamental frequency quartz crystal microbalance (QCM) is fabricated for sensor applications using a wet etching technique. The vibration area is reduced in the fabrication of the high frequency QCM with an inverted mesa structure. To reduce the complexity of the side wall profile that results from anisotropic quartz etching, a rectangular vibration area is used instead of the conventional circular structure. QCMs with high Q values exceeding 25,000 at 47 MHz, 27,000 at 60 MHz, 24,000 at 73 MHz and 25,000 at 84 MHz are fabricated on 4 × 4 mm2 chips with small vibration areas of 1.2 × 1.4 mm2. A PMMA-based flow cell is designed and manufactured to characterize the behavior of the fabricated QCM chip in a liquid. Q values as high as 1,006 at 47 MHz, 904 at 62 MHz, 867 at 71 MHz and 747 at 84 MHz are obtained when one side of the chip is exposed to pure water. These results show that fabricated QCM chips can be used for bio- and chemical sensor applications in liquids.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 74
    Publication Date: 2013-09-11
    Description: Finger vein recognition is a promising biometric recognition technology, which verifies identities via the vein patterns in the fingers. Binary pattern based methods were thoroughly studied in order to cope with the difficulties of extracting the blood vessel network. However, current binary pattern based finger vein matching methods treat every bit of feature codes derived from different image of various individuals as equally important and assign the same weight value to them. In this paper, we propose a finger vein recognition method based on personalized weight maps (PWMs). The different bits have different weight values according to their stabilities in a certain number of training samples from an individual. Firstly we present the concept of PWM, and then propose the finger vein recognition framework, which mainly consists of preprocessing, feature extraction, and matching. Finally, we design extensive experiments to evaluate the effectiveness of our proposal. Experimental results show that PWM achieves not only better performance, but also high robustness and reliability. In addition, PWM can be used as a general framework for binary pattern based recognition.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 75
    Publication Date: 2013-09-11
    Description: The aim of this work is to study the sensing behavior of Sr-doped hematite for soil water content measurement. The material was prepared by solid state reaction from commercial hematite and strontium carbonate heat treated at 900 °C. X-Ray diffraction, scanning electron microscopy and mercury intrusion porosimetry were used for microstructural characterization of the synthesized powder. Sensors were then prepared by uniaxially pressing and by screen-printing, on an alumina substrate, the prepared powder and subsequent firing in the 800–1,000 °C range. These sensors were first tested in a laboratory apparatus under humid air and then in an homogenized soil and finally in field. The results evidenced that the screen printed film was able to give a response for a soil matric potential from about 570 kPa, that is to say well below the wilting point in the used soil.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 76
    Publication Date: 2013-09-11
    Description: Salinity and trace mineral accumulation threaten the sustainability of crop production in many semi-arid parts of the world, including California’s western San Joaquin Valley (WSJV). We used data from a multi-year field-scale trial in Kings County and related container trials to simulate a forage-grazing system under saline conditions. The model uses rainfall and irrigation water amounts, irrigation water quality, soil, plant, and atmospheric variables to predict Bermuda grass (Cynodon dactylon (L.) Pers.) growth, quality, and use by cattle. Simulations based on field measurements and a related container study indicate that although soil chemical composition is affected by irrigation water quality, irrigation timing and frequency can be used to mitigate salt and trace mineral accumulation. Bermuda grass yields of up to 12 Mg dry matter (DM)·ha−1 were observed at the field site and predicted by the model. Forage yield and quality supports un-supplemented cattle stocking rates of 1.0 to 1.2 animal units (AU)·ha−1. However, a balance must be achieved between stocking rate, desired average daily gain, accumulation of salts in the soil profile, and potential pollution of ground water from drainage and leaching. Using available weather data, crop-specific parameter values and field scale measurements of soil salinity and nitrogen levels, the model can be used by farmers growing forages on saline soils elsewhere, to sustain forage and livestock production under similarly marginal conditions.
    Electronic ISSN: 2071-1050
    Topics: Energy, Environment Protection, Nuclear Power Engineering
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  • 77
    Publication Date: 2013-09-12
    Description: Publication date: Available online 11 September 2013 Source: FEBS Open Bio Author(s): Gisele Castro , Maria Fernanda C. Areias , Lais Weissmann , Paula G.F. Quaresma , Carlos K. Katashima , Mario J.A. Saad , Patricia O. Prada Insulin acts in the hypothalamus, decreasing food intake (FI) by the IR/PI3K/Akt pathway. This pathway is impaired in obese animals and endoplasmic reticulum (ER) stress and low-grade inflammation are possible mechanisms involved in this impairment. Here, we highlighted the amygdala as an important brain region for FI regulation in response to insulin. This regulation was dependent on PI3K/AKT pathway similar to the hypothalamus. Insulin was able to decrease neuropeptide Y (NPY) and increase oxytocin mRNA levels in the amygdala via PI3K, which may contribute to hypophagia. Additionally, obese rats did not reduce FI in response to insulin and AKT phosphorylation was decreased in the amygdala, suggesting insulin resistance. Insulin resistance was associated with ER stress and low-grade inflammation in this brain region. The inhibition of ER stress with PBA reverses insulin action/signaling, decreases NPY and increases oxytocin mRNA levels in the amygdala from obese rats, suggesting that ER stress is probably one of the mechanisms that induce insulin resistance in the amygdala.
    Electronic ISSN: 2211-5463
    Topics: Biology
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  • 78
    Publication Date: 2013-09-12
    Description: This paper presents experimental characterization of plasmoids (fireballs) obtained by directing localized microwave power (〈1 kW at 2.45 GHz) onto a silicon-based substrate in a microwave cavity. The plasmoid emerges up from the hotspot created in the solid substrate into the air within the microwave cavity. The experimental diagnostics employed for the fireball characterization in this study include measurements of microwave scattering, optical spectroscopy, small-angle X-ray scattering (SAXS), scanning electron microscopy (SEM) and energy dispersive X-ray spectroscopy (EDS). Various characteristics of these plasmoids as dusty plasma are drawn by a theoretical analysis of the experimental observations. Aggregations of dust particles within the plasmoid are detected at nanometer and micrometer scales by both in-situ SAXS and ex-situ SEM measurements. The resemblance of these plasmoids to the natural ball-lightning (BL) phenomenon is discussed with regard to silicon nano-particle clustering and formation of slowly-oxidized silicon micro-spheres within the BL. Potential applications and practical derivatives of this study (e.g., direct conversion of solids to powders, material identification by breakdown spectroscopy (MIBS), thermite ignition, and combustion) are discussed.
    Electronic ISSN: 1996-1944
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 79
    Publication Date: 2013-09-12
    Description: In this study, we simulate the electrophoretic motion of a bio-polymer through a synthetic nanopore in the presence of an external bias voltage by considering the hydrodynamic interactions between the polymer and the fluid explicitly. The motion of the polymer is simulated by 3D Langevin dynamics technique by modeling the polymer as a worm-like-chain, while the hydrodynamic interactions are incorporated by the lattice Boltzmann equation. We report the simulation results for three different lengths of the nanopore. The translocation time increases with the pore length even though the electrophoretic force on the polymer is the same irrespective of the pore length. This is attributed to the fact that the translocation velocity of each bead inside the nanopore decreases with the pore length due to the increased fluid resistance force caused by the increase in the straightened portion of the polymer. We confirmed this using a theoretical formula.
    Electronic ISSN: 1996-1944
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 80
    Publication Date: 2013-09-12
    Description: Shadows in high resolution imagery create significant problems for urban land cover classification and environmental application. We first investigated whether shadows were intrinsically different and hypothetically possible to separate from each other with ground spectral measurements. Both pixel-based and object-oriented methods were used to evaluate the effects of shadow detection on QuickBird image classification and spectroradiometric restoration. In each method, shadows were detected and separated either with or without histogram thresholding, and subsequently corrected with a k-nearest neighbor algorithm and a linear correlation correction. The results showed that shadows had distinct spectroradiometric characteristics, thus, could be detected with an optimal brightness threshold and further differentiated with a scene-based near infrared ratio. The pixel-based methods generally recognized more shadow areas and with statistically higher accuracy than the object-oriented methods. The effects of the prior shadow thresholding were not statistically significant. The accuracy of the final land cover classification, after accounting for the shadow detection and separation, was significantly higher for the pixel-based methods than for the object-oriented methods, although both achieved similar accuracy for the non-shadow classes. Both radiometric restoration algorithms significantly reduced shadow areas in the original satellite images.
    Electronic ISSN: 2072-4292
    Topics: Architecture, Civil Engineering, Surveying , Geography
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  • 81
    Publication Date: 2013-09-12
    Description: Since the mechanical properties of single cells together with the intercellular adhesive properties determine the macro-mechanical properties of plants, a method for evaluation of the cell elastic properties is needed to help explanation of the behavior of fruits and vegetables in handling and food processing. For this purpose, indentation of tomato mesocarp cells with an atomic force microscope was used. The Young’s modulus of a cell using the Hertz and Sneddon models, and stiffness were calculated from force-indentation curves. Use of two probes of distinct radius of curvature (20 nm and 10,000 nm) showed that the measured elastic properties were significantly affected by tip geometry. The Young’s modulus was about 100 kPa ± 35 kPa and 20 kPa ± 14 kPa for the sharper tip and a bead tip, respectively. Moreover, large variability regarding elastic properties (>100%) among cells sampled from the same region in the fruit was observed. We showed that AFM provides the possibility of combining nano-mechanical properties with topography imaging, which could be very useful for the study of structure-related properties of fruits and vegetables at the cellular and sub-cellular scale.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 82
    Publication Date: 2013-09-12
    Description: Despite longstanding contributions to oceanography, similar use of fluorescence light detection and ranging (LiDAR) in lake settings is not routine. The potential for ship-mounted, multispectral Ultraviolet Fluorescence LiDAR (UFL) to provide rapid, high-resolution data in variably turbid and productive lake conditions are investigated here through a series of laboratory tank and field measurements carried out on Lake Balaton, Hungary. UFL data, calibrated empirically to a set of coinciding conventionally-analyzed samples, provide simultaneous estimates of three important parameters-chlorophyll a(chla), total suspended matter (TSM) and colored dissolved organic matter (CDOM). Successful UFL retrievals from both laboratory and field measurements were achieved for chla (0.01–378 mg∙m−3; R = 0.83–0.92), TSM (0.1–130 g∙m−3; R = 0.90–0.96) and CDOM (0.003–0.125 aCDOM(440); R = 0.80–0.97). Fluorescence emission at 685 nm is shown through tank measurements to display robust but distinct relationships with chla concentration for the two cultured algae species investigated (cyanobacteria, Cylindrospermopsis raciborskii, and chlorophyta, Scenedesmus armatus). The ratio between fluorescence emissions measured at 650 nm, related to the phycocyanin fluorescence maximum, to that at 685 nm is demonstrated to effectively distinguish these two species. Validation through both laboratory measurements and field measurements confirmed that site specific calibration is necessary. This study presents the first known assessment and application of ship-mounted fluorescence LiDAR in freshwater lake conditions and demonstrates the use of UFL in measuring important water quality parameters despite the more complicated hydro-optic conditions of inland waters.
    Electronic ISSN: 2072-4292
    Topics: Architecture, Civil Engineering, Surveying , Geography
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  • 83
    Publication Date: 2013-09-12
    Description: Active magnetic bearings (AMBs) have become a key technology in various industrial applications. Self-sensing AMBs provide an integrated sensorless solution for position estimation, consolidating the sensing and actuating functions into a single electromagnetic transducer. The approach aims to reduce possible hardware failure points, production costs, and system complexity. Despite these advantages, self-sensing methods must address various technical challenges to maximize the performance thereof. This paper presents the direct current measurement (DCM) approach for self-sensing AMBs, denoting the direct measurement of the current ripple component. In AMB systems, switching power amplifiers (PAs) modulate the rotor position information onto the current waveform. Demodulation self-sensing techniques then use bandpass and lowpass filters to estimate the rotor position from the voltage and current signals. However, the additional phase-shift introduced by these filters results in lower stability margins. The DCM approach utilizes a novel PA switching method that directly measures the current ripple to obtain duty-cycle invariant position estimates. Demodulation filters are largely excluded to minimize additional phase-shift in the position estimates. Basic functionality and performance of the proposed self-sensing approach are demonstrated via a transient simulation model as well as a high current (10 A) experimental system. A digital implementation of amplitude modulation self-sensing serves as a comparative estimator.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 84
    Publication Date: 2013-09-12
    Description: The stability of radiance measurements taken by the Sky Quality Meter (SQM)was tested under rapidly changing temperature conditions during exposure to a stable lightfield in the laboratory. The reported radiance was found to be negatively correlated withtemperature, but remained within 7% of the initial reported radiance over a temperaturerange of -15 °C to 35 °C, and during temperature changes of -33 °C/h and +70 °C/h.This is smaller than the manufacturer’s quoted unit-to-unit systematic uncertainty of 10%,indicating that the temperature compensation of the SQM is adequate under expected outdooroperating conditions.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 85
    Publication Date: 2013-09-13
    Description: High-entropy (H-E) alloys, bulk metallic glasses (BMGs) and high-entropy BMGs (HE-BMGs) were statistically analyzed with the help of a database of ternary amorphous alloys. Thermodynamic quantities corresponding to heat of mixing and atomic size differences were calculated as a function of composition of the multicomponent alloys. Actual calculations were performed for configurational entropy (Sconfig.) in defining the H-E alloys and mismatch entropy (Ss) normalized with Boltzmann constant (kB), together with mixing enthalpy (DHmix) based on Miedema’s empirical model and Delta parameter (d) as a corresponding parameter to Ss/kB. The comparison between DHmix–d and DHmix–  diagrams for the ternary amorphous alloys revealed Ss/kB ~ (d /22)2. The zones S, S′ and B’s where H-E alloys with disordered solid solutions, ordered alloys and BMGs are plotted in the DHmix–d diagram are correlated with the areas in the DHmix – Ss /kB diagram. The results provide mutual understandings among H-E alloys, BMGs and HE-BMGs.
    Electronic ISSN: 1099-4300
    Topics: Chemistry and Pharmacology , Physics
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  • 86
    Publication Date: 2013-09-13
    Description: Aquaculture coasts have become widely distributed in coastal zones as human activities are intensified. Due to the complexity in this type of coast, it is difficult to extract the coastline with traditional automated mapping approaches. In this paper, we present an automated method—object-based region growing integrating edge detection (OBRGIE) for the extraction of this type of coastline. In this method, a new object feature named OMI (object merging index) is proposed to separate land and sea. The OBRGIE method was applied to Landsat Thematic Mapper (TM) (pixel size 30m) and Satellite Pour l’Observation de la Terre (SPOT-5) (pixel size 10 m) images of two coastal segments with lengths of 272.7 km and 35.5 km respectively, and the accuracy of the extracted coastlines was assessed in comparison with the manually delineated coastlines. The mean and RMSE (root mean square error) are 16.0 m and 16.4 m respectively for the TM images, and 8.0 m and 8.6 m, respectively, for the SPOT-5 images, indicating that the proposed method derives coastlines with pixel accuracy. The OBRGIE method is also found to be robust to the segmentation scale parameter, and the OMI feature is much more effective than the spectral attribute in separating land and sea in aquaculture coasts. This method may provide an inexpensive means of fast coastline mapping from remotely sensed imagery with relatively fine-to-moderate spatial resolution in coastal sectors with intense human interference.
    Electronic ISSN: 2072-4292
    Topics: Architecture, Civil Engineering, Surveying , Geography
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  • 87
    Publication Date: 2013-09-13
    Description: A study was undertaken to assess Envisat Advanced Synthetic Aperture Radar (ASAR) ScanSAR data for quantifying forest growing stock volume (GSV) across three boreal regions with varying forest types, composition, and structure (Sweden, Central Siberia, and Québec). Estimates of GSV were obtained using hyper-temporal observations of the radar backscatter acquired by Envisat ASAR with the BIOMASAR algorithm. In total, 5.3×106 km2 were mapped with a 0.01° pixel size to obtain estimates representative for the year of 2005. Comparing the SAR-based estimates to spatially explicit datasets of GSV, generated from forest field inventory and/or Earth Observation data, revealed similar spatial distributions of GSV. Nonetheless, the weak sensitivity of C-band backscatter to forest structural parameters introduced significant uncertainty to the estimated GSV at full resolution. Further discrepancies were observed in the case of different scales of the ASAR and the reference GSV and in areas of fragmented landscapes. Aggregation to 0.1° and 0.5° was then undertaken to generate coarse scale estimates of GSV. The agreement between ASAR and the reference GSV datasets improved; the relative difference at 0.5° was consistently within a magnitude of 20–30%. The results indicate an improvement of the characterization of forest GSV in the boreal zone with respect to currently available information.
    Electronic ISSN: 2072-4292
    Topics: Architecture, Civil Engineering, Surveying , Geography
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  • 88
    Publication Date: 2013-09-13
    Description: This paper investigates the linear separation requirements for Angle-of-Arrival (AoA) and range sensors, in order to achieve the optimal performance in estimating the position of a target from multiple and typically noisy sensor measurements. We analyse the sensor-target geometry in terms of the Cramer–Rao inequality and the corresponding Fisher information matrix, in order to characterize localization performance with respect to the linear spatial distribution of sensors. Here in this paper, we consider both fixed and adjustable linear sensor arrays.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 89
    Publication Date: 2013-09-13
    Description: The problem of drifting charge-induced currents is considered in order to predict the pulsed operational characteristics in photo-and particle-detectors with a junction controlled active area. The direct analysis of the field changes induced by drifting charge in the abrupt junction devices with a plane-parallel geometry of finite area electrodes is presented. The problem is solved using the one-dimensional approach. The models of the formation of the induced pulsed currents have been analyzed for the regimes of partial and full depletion. The obtained solutions for the current density contain expressions of a velocity field dependence on the applied voltage, location of the injected surface charge domain and carrier capture parameters. The drift component of this current coincides with Ramo’s expression. It has been illustrated, that the synchronous action of carrier drift, trapping, generation and diffusion can lead to a vast variety of possible current pulse waveforms. Experimental illustrations of the current pulse variations determined by either the rather small or large carrier density within the photo-injected charge domain are presented, based on a study of Si detectors.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 90
    Publication Date: 2013-09-13
    Description: A visible light communication (VLC) system using an organic bulk heterojunction photodetector (OPD) is presented. The system has been successfully proven indoors with an audio signal. The emitter consists of three commercial high-power white LEDs connected in parallel. The receiver is based on an organic photodetector having as active layer a blend of poly(3-hexylthiophene) (P3HT) and phenyl C61-butyric acid methyl ester (PCBM). The OPD is opto-electrically characterized, showing a responsivity of 0.18 A/W and a modulation response of 790 kHz at −6 V.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
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  • 91
    Publication Date: 2013-09-13
    Description: In form and in content, cities are the epitome of diversity. This state is the result of the accumulation of layers of history, of construction, of demolition and reconstruction cycles. These tensions are the catalyst for the emergence of new urban forms and participate in the construction of heritage. As such they should be encouraged. As important as the existing fabric of the city is, its evolution to accommodate the ever-changing needs and fashions of its inhabitants is paramount. For regeneration to be successful it must inscribe itself in this process and it must be driven by an understanding of the environment where it occurs. This paper explores, through the lens of an architectural practice, some design processes and architectural proposals that have been generated by working on the Valletta harbours. It also discusses the necessary dynamics required to accommodate stakeholder engagement and planning policy while ensuring design quality and the perpetuation of the creative process inherent to the city. Finally, the paper introduces, as a possible future, the experiments and studies of the practice on the wider Valletta, putting into perspective the benefits of theoretical research combined with formal and aesthetic explorations of the harbour region.
    Electronic ISSN: 2071-1050
    Topics: Energy, Environment Protection, Nuclear Power Engineering
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  • 92
    Publication Date: 2013-09-13
    Description: An experimental campaign is undertaken in order to investigate the hydraulic features of a vertical drop shaft, also considering the influence of a venting system consisting of a coaxial vertical pipe, projecting within the drop shaft with different plunging rates. Three different flow regimes are observed: a “weir flow” for very low head values, where the flow profile is subject to the atmospheric pressure; a “full flow” for high head values, where water flows in a pressurized regime along the whole shaft; and a “transitional flow” for intermediate water head values. Weir flow and full flow can be experimentally investigated under steady-state conditions, whereas transitional flow is a pulsating condition, alternately switching from full flow to weir flow. Considering some significant geometric parameters, a head-discharge relation is sought both for the non-vented and for the vented configurations, by means of an energy balance equation, with specific assumptions about intake losses.
    Electronic ISSN: 2073-4441
    Topics: Energy, Environment Protection, Nuclear Power Engineering
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  • 93
    Publication Date: 2013-09-14
    Description: Publication date: Available online 12 September 2013 Source: Cell Reports Author(s): Debra A. Mayes , Tilat A. Rizvi , Haley Titus-Mitchell , Rachel Oberst , Georgianne M. Ciraolo , Charles V. Vorhees , Andrew P. Robinson , Stephen D. Miller , Jose A. Cancelas , Anat O. Stemmer-Rachamimov , Nancy Ratner Patients with neurofibromatosis type 1 (NF1) and Costello syndrome Rasopathy have behavioral deficits. In NF1 patients, these may correlate with white matter enlargement and aberrant myelin. To model these features, we induced Nf1 loss or HRas hyperactivation in mouse oligodendrocytes. Enlarged brain white matter tracts correlated with myelin decompaction, downregulation of claudin-11, and mislocalization of connexin-32. Surprisingly, non-cell-autonomous defects in perivascular astrocytes and the blood-brain barrier (BBB) developed, implicating a soluble mediator. Nitric oxide (NO) can disrupt tight junctions and gap junctions, and NO and NO synthases (NOS1–NOS3) were upregulated in mutant white matter. Treating mice with the NOS inhibitor NG-nitro-L-arginine methyl ester or the antioxidant N-acetyl cysteine corrected cellular phenotypes. CNP-HRasG12V mice also displayed locomotor hyperactivity, which could be rescued by antioxidant treatment. We conclude that Nf1/Ras regulates oligodendrocyte NOS and that dysregulated NO signaling in oligodendrocytes can alter the surrounding vasculature. The data suggest that antioxidants may improve some behavioral deficits in Rasopathy patients. Graphical abstract Teaser In this study, Ratner and colleagues show that altering intracellular signaling in oligodendrocytes affects brain astrocytes and blood vessels that together make up the blood-brain barrier. Increasing oligodendrocyte Ras-GTP, mimicking neurofibromatosis type 1 and Costello syndrome, disrupted astrocyte and endothelial cell tight junctions and gap junctions and caused a leaky blood-brain barrier. Exposure to a nitric oxide synthase inhibitor or an antioxidant reversed cellular phenotypes and behavioral hyperactivity. Thus, oligodendrocytes contribute to brain homeostasis, and antioxidant therapy may be beneficial when homeostasis is disrupted.
    Electronic ISSN: 2211-1247
    Topics: Biology
    Published by Elsevier on behalf of Cell Press.
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  • 94
    Publication Date: 2013-09-14
    Description: Publication date: Available online 12 September 2013 Source: Cell Reports Author(s): Dalit Ben-Yosef , Francesca S. Boscolo , Hadar Amir , Mira Malcov , Ami Amit , Louise C. Laurent Given the association between mutational load and cancer, the observation that genetic aberrations are frequently found in human pluripotent stem cells (hPSCs) is of concern. Prior studies in human induced pluripotent stem cells (hiPSCs) have shown that deletions and regions of loss of heterozygosity (LOH) tend to arise during reprogramming and early culture, whereas duplications more frequently occur during long-term culture. For the corresponding experiments in human embryonic stem cells (hESCs), we studied two sets of hESC lines: one including the corresponding parental DNA and the other generated from single blastomeres from four sibling embryos. Here, we show that genetic aberrations observed in hESCs can originate during preimplantation embryo development and/or early derivation. These early aberrations are mainly deletions and LOH, whereas aberrations arising during long-term culture of hESCs are more frequently duplications. Our results highlight the importance of close monitoring of genomic integrity and the development of improved methods for derivation and culture of hPSCs. Graphical abstract Teaser Human embryonic stem cells (hESCs) are potential sources of cells for transplantation therapy. However, given the association between mutations and cancer, the frequency of genetic aberrations observed in hESCs is concerning. Using unique pedigrees of hESC lines, Laurent and colleagues now find that aberrations that occur during cell-line derivation are mainly deletions and loss of heterozygosity, whereas duplications arise more commonly during long-term culture. These results highlight the need for improved methods for derivation and culture that preserve the genetic integrity of hESCs.
    Electronic ISSN: 2211-1247
    Topics: Biology
    Published by Elsevier on behalf of Cell Press.
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  • 95
    Publication Date: 2013-09-14
    Description: Publication date: Available online 12 September 2013 Source: Cell Reports Author(s): Jason Karpac , Benoit Biteau , Heinrich Jasper Loss of metabolic homeostasis is a hallmark of aging and is commonly characterized by the deregulation of adaptive signaling interactions that coordinate energy metabolism with dietary changes. The mechanisms driving age-related changes in these adaptive responses remain unclear. Here, we characterize the deregulation of an adaptive metabolic response and the development of metabolic dysfunction in the aging intestine of Drosophila . We find that activation of the insulin-responsive transcription factor Foxo in intestinal enterocytes is required to inhibit the expression of evolutionarily conserved lipases as part of a metabolic response to dietary changes. This adaptive mechanism becomes chronically activated in the aging intestine, mediated by changes in Jun-N-terminal kinase (JNK) signaling. Age-related chronic JNK/Foxo activation in enterocytes is deleterious, leading to sustained repression of intestinal lipase expression and the disruption of lipid homeostasis. Changes in the regulation of Foxo-mediated adaptive responses thus contribute to the age-associated breakdown of metabolic homeostasis. Graphical abstract Teaser Aging is associated with a loss of metabolic homeostasis, which is a risk factor for various human pathologies. Using Drosophila , Karpac, Biteau, and Jasper show that the transcription factor Foxo regulates intestinal lipid homeostasis as part of an adaptive response to dietary changes and that chronic intestinal activation of Foxo with age leads to the disruption of lipid metabolism. These results demonstrate that changes in the regulation of adaptive signaling mechanisms can contribute to the age-associated breakdown of metabolic homeostasis.
    Electronic ISSN: 2211-1247
    Topics: Biology
    Published by Elsevier on behalf of Cell Press.
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  • 96
    Publication Date: 2013-09-14
    Description: Applying the particle filter (PF) technique, this paper proposes a PF-based algorithm to blindly demodulate the chaotic direct sequence spread spectrum (CDS-SS) signals under the colored or non-Gaussian noises condition. To implement this algorithm, the PFs are modified by (i) the colored or non-Gaussian noises are formulated by autoregressive moving average (ARMA) models, and then the parameters that model the noises are included in the state vector; (ii) the range-differentiating factor is imported into the intruder’s chaotic system equation. Since the range-differentiating factor is able to make the inevitable chaos fitting error advantageous based on the chaos fitting method, thus the CDS-SS signals can be demodulated according to the range of the estimated message. Simulations show that the proposed PF-based algorithm can obtain a good bit-error rate performance when extracting the original binary message from the CDS-SS signals without any knowledge of the transmitter’s chaotic map, or initial value, even when colored or non-Gaussian noises exist.
    Electronic ISSN: 1099-4300
    Topics: Chemistry and Pharmacology , Physics
    Published by MDPI Publishing
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  • 97
    Publication Date: 2013-09-14
    Description: As an important part of the smart grid, a wide-area measurement system (WAMS) provides the key technical support for power system monitoring, protection and control. But 20 uncertainties in system parameters and signal transmission time delay could worsen the damping effect and deteriorate the system stability. In the presented study, the subspace system identification technique (SIT) is used to firstly derive a low-order linear model of a power system from the measurements. Then, a novel adaptive wide-area damping control scheme for online tuning of the wide-area damping controller (WADC) parameters using the residue method is proposed. In order to eliminate the effects of the time delay to the signal transmission, a simple and practical time delay compensation algorithm is proposed to compensate the time delay in each wide-area control signal. Detailed examples, inspired by the IEEE test system under various disturbance scenarios, have been used to verify the effectiveness of the proposed adaptive wide-area damping control scheme.
    Electronic ISSN: 1996-1073
    Topics: Energy, Environment Protection, Nuclear Power Engineering
    Published by MDPI Publishing
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  • 98
    Publication Date: 2013-09-14
    Description: Publication date: Available online 13 September 2013 Source: Geoscience Frontiers Author(s): K. Naganjaneyulu
    Print ISSN: 1674-9871
    Topics: Geosciences
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  • 99
    Publication Date: 2013-09-14
    Description: Model membrane approaches have attracted much attention in biomedical sciences to investigate and simulate biological processes. The application of model membrane systems for biosensor measurements is partly restricted by the fact that the integrity of membranes critically depends on the maintenance of an aqueous surrounding, while various biosensors require a preconditioning of dry sensors. This is for example true for the well-established surface acoustic wave (SAW) biosensor SAM®5 blue. Here, a simple drying procedure of sensor-supported model membranes is introduced using the protective disaccharide trehalose. Highly reproducible model membranes were prepared by the Langmuir-Blodgett technique, transferred to SAW sensors and supplemented with a trehalose solution. Membrane rehydration after dry incorporation into the SAW device becomes immediately evident by phase changes. Reconstituted model membranes maintain their full functionality, as indicated by biotin/avidin binding experiments. Atomic force microscopy confirmed the morphological invariability of dried and rehydrated membranes. Approximating to more physiological recognition phenomena, the site-directed immobilization of the integrin VLA-4 into the reconstituted model membrane and subsequent VCAM-1 ligand binding with nanomolar affinity were illustrated. This simple drying procedure is a novel way to combine the model membrane generation by Langmuir-Blodgett technique with SAW biosensor measurements, which extends the applicability of SAM®5 blue in biomedical sciences.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
    Published by MDPI Publishing
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  • 100
    Publication Date: 2013-09-14
    Description: Hull cleaning before repainting is a key operation in the maintenance of ships. For years, a method to improve such operation has been sought by means of the robotization of techniques such as grit blasting and ultra high pressure water jetting. Despite this, it continues to be standard practice in shipyards that this process is carried out manually because the developed robotized systems are too expensive to be widely accepted by shipyards. We have chosen to apply a more conservative and realistic approach to this problem, which has resulted in the development of several solutions that have been designed with different automation and operation range degrees. These solutions are fitted with most of the elements already available in many shipyards, so the installation of additional machinery in the workplace would not be necessary. This paper describes the evolutionary development of sensor systems for the automation of the preparation process of ship hull surfaces before the painting process is performed. Such evolution has given rise to the development of new technologies for coating removal.
    Electronic ISSN: 1424-8220
    Topics: Chemistry and Pharmacology , Electrical Engineering, Measurement and Control Technology
    Published by MDPI Publishing
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