ALBERT

Description / Table of Contents: 1. General introduction --- 2. Morphological development of sensory and swimming organs and the central nervous system in the striped jack --- 2-1. Introduction --- 2-2. Materials and methods --- 2-2A. Materials --- 2-2B. Morphology --- 2-2C. Histology of eye, lateral line, muscle, bone and the central nervous system --- 2-3. Results --- 2-3A. Morphology --- 2-3B. Relative growth --- 2-3C. Ossification --- 2-3D. Muscle --- 2-3E. Eye --- 2-3F. Cephalic and trunk lateral lines --- 2-3G. The central nervous system --- 2-4. Discussion --- 2-4A. Morphological development related to swimming ability --- 2-4B. Development of sensory organs --- 2-4C. Development of the central nervous system --- 3. Ontogeny of schooling behavior and other behavioral traits in the striped jack --- 3-1. Introduction --- 3-2. Materials and methods --- 3-2A. Phototaxis --- 3-2B. Rheotaxis --- 3-2C. Optokinetic response --- 3-2D. Schooling behavior --- 3-2E. Association with floating objects --- 3-3. Results --- 3-3A. Phototaxis --- 3-3B. Rheotaxis --- 3-3C. Optokinetic response --- 3-3D. Schooling behavior --- 3-3E. Association behavior --- 3-4. Discussion --- 3-4A. Development of taxis in relation to sensory and swimming organs --- 3-4B. Ecological speculations on survival strategy and migratory behavior --- 4. Critical involvement of the central nervous system for the development of schooling behavior revealed by docosahexaenoic acid deficiency experiments --- 4-1. Introduction --- 4-2. Materials and methods --- 4-2A. Effect of dietary DHA on the growth, survival, and brain development in the striped jack --- 4-2B. Effect of dietary condition on behavior --- 4-2C. Incorporation of DHA into the central nervous system --- 4-3. Results --- 4-3A. Effect of dietary DHA on the growth, survival, and brain development in the striped jack --- 4-3B. Effect of dietary condition on the schooling behavior of yellowtail --- 4-3C. Incorporation of DHA into the central nervous system in the yellowtail --- 4-4. Discussion --- 5. Ontogeny of association behavior between jack mackerel and jellyfish --- 5-1. Introduction --- 5-2. Materials and methods --- 5-2A. Feeding on jellyfish --- 5-2B. Utilization of jellyfish as a prey collector --- 5-2C. Utilization of jellyfish as a refuge from predators --- 5-2D. Ontogenetic changes in the function of association between jack mackerel and jellyfish --- 5-2E. Underwater observation of fish assemblages associated with jellyfish --- 5-3. Results --- 5-3A. Feeding on jellyfish --- 5-3B. Utilization of jellyfish as a prey collector --- 5-3C. Utilization of jellyfish as a refuge from predators --- 5-3D. Ontogenetic changes of the function of association between jack mackerel and jellyfish --- 5-3E. Underwater observation of fish assemblages associated with jellyfish --- 5-4. Discussion --- 5-4A. Ontogeny of function in the association behavior of jack mackerel with jellyfish --- 5-4B. Ontogeny of mechanisms in associating with jellyfish --- 6. Behavioral ontogeny of common pelagic fishes with reference to the population replacement --- 6-1. Introduction --- 6-2. Materials and methods --- 6-2A. Fish husbandry --- 6-2B. Swimming speed --- 6-2C. Anti-predator performance --- 6-3. Results --- 6-3A. Growth --- 6-3B. Swimming speed and anti-predator performance --- 6-4. Discussion --- 6-4A. Growth performance of hatchery-reared pelagic fish larvae and comparison to wild conspecifics --- 6-4B. Swimming speeds in the context of feeding ecology --- 6-4C. Inter-specific difference of the ontogeny of anti-predator performance --- 6-4D. Environmental factors as a driving force of population replacement --- 7. General discussion: Towards the sustainable management of fisheries resources --- 7-1. Implications of ontogenetic study for the fisheries resource management --- 7-2. Perspectives for the sustainable management in fisheries resources

Description / Table of Contents: Early Japanese contributions to space weather research—1945-1960— / A. Nishida / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 1-22 --- Hydrodynamics, magnetohydrodynamics, and astrophysical plasmas / E. N. Parker / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 23-40 --- The 1960s—A decade of remarkable advances in middle atmosphere research / M. A. Geller / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 41-62 --- Hinode "a new solar observatory in space" / S. Tsuneta, L. K. Harra, and S. Masuda / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 63-75 --- Coronal mass ejections and space weather / N. Gopalswamy / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 77-120 / © TERRAPUB, Tokyo, 2009. No claim is made to original U.S. Government works. / [Full text] (PDF 3.9 MB) --- Magnetotail after Geotail, Interball and Cluster: Thin current sheets, fine structure, force balance and stability / L. Zelenyi, H. Malova, A. Artemyev, V. Popov, A. Petrukovich, D. Delcourt, and A. Bykov / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 121-170 --- Simulating solar 'climate' / M. Dikpati / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 171-199 --- Evidence for solar forcing: Some selected aspects / J. Beer and K. McCracken / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 201-216 --- Total solar irradiance variability: What have we learned about its variability from the record of the last three solar cycles? / C. Fröhlich / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 217-230 --- Mechanisms for solar influence on the Earth's climate / J. D. Haigh / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 231-256 --- Variability in the stratosphere: The sun and the QBO / K. Labitzke and M. Kunze / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 257-278 --- Gravity wave coupling from below: A review / R. A. Vincent / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 279-293 --- What we have learnt from CPEA (Coupling Processes in the Equatorial Atmosphere): A review / S. Fukao / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 295-336 --- Vertical coupling by the semidiurnal tide in Earth's atmosphere / J. M. Forbes / Climate and Weather of the Sun-Earth System (CAWSES): Selected Papers from the 2007 Kyoto Symposium, / pp. 337-348

Description / Table of Contents: Towards State-of-the-Art Dynamical Modelling and Risk Assessment of Persistent Organic Pollutants (POPs) in the Global Environment / T. Kawai and I. C. Handoh / pp. 1-9 --- Teasing out the Non-Linearity in the POPs-Phytoplankton Bioconcentration Processes / M. Seto and I. C. Handoh / pp. 11-19 --- Comprehensive Assessment of Dioxin Contamination in Da Nang Airbase and Its Vicinities: Environmental Levels, Human Exposure and Options for Mitigating Impacts / N. H. Minh, T. Boivin, P. N. Canh and L. K. Son / pp. 21-29 --- Contamination Status of Dioxins in Sediments from Saigon River Estuary, Vietnam / A. Shiozaki, M. Someya, T. Kunisue, S. Takahashi, B. C. Tuyen, H. Takada and S. Tanabe / pp. 31-45 --- Bioaccumulation of Dioxins in the Benthic Fish from Hiroshima Bay / H. Tanaka, K. Kono and D. Ueno / pp. 47-54 --- Hydroxylated Polychlorinated Biphenyls in the Blood of Cetaceans Stranded along the Japanese Coast / S. Murata, K. Nomiyama, T. Kunisue, S. Takahashi, T. K. Yamada and S. Tanabe / pp. 55-66 --- Contamination Status of Organohalogen Compounds in Deep-Sea Fishes in Northwest Pacific Ocean, Off-Tohoku, Japan / T. Oshihoi, T. Isobe, S. Takahashi, T. Kubodera and S. Tanabe / pp. 67-72 --- Temporal Variation of Persistent Organochlorine Residues in Soils from Vietnam / V. D. Thao, V. D. Toan and M. Kawano / pp. 73-82 --- Organochlorines and Brominated Flame Retardants in Deep-Sea Ecosystem of Sagami Bay / S. Toyoshima, T. Isobe, K. Ramu, H. Miyasaka, K. Omori, S. Takahashi, S. Nishida and S. Tanabe / pp. 83-90 --- Contamination by PCBs and BFRs in Vietnamese Human Milk Associated with Recycling of E-waste / N. M. Tue, A. Sudaryanto, B. H. Nhat, S. Takahashi, P. H. Viet and S. Tanabe / pp. 91-97 --- Ecological Risk Assessment Using High Resolution Analysis of Polychlorinated Biphenyls (PCBs) / N. Kannan and G. Petrick / pp. 99-109 --- Residue Levels of OH-PCBs and PCBs in the Blood of Baikal Seals (Pusa sibirica) / D. Imaeda, K. Nomiyama, T. Kunisue, H. Iwata, O. Tsydenova, S. Takahashi, M. Amano, E. A. Petrov, V. B. Batoev and S. Tanabe / pp. 111-117 --- Contamination Status of Brominated Flame Retardants (BFRs) in Baikal Seals (Pusa sibirica) / T. Isobe, Y. Ochi, D. Imaeda, H. Sakai, S. Hirakawa, O. Tsydenova, M. Amano, E. Petrov, V. Batoev, H. Iwata, S. Takahashi and S. Tanabe / pp. 119-124 --- Levels of Brominated Flame Retardants in Sediments and Their Bioaccumulation Potential in Biota from Jakarta Bay and Its Surroundings, Indonesia / A. Sudaryanto, I. E. Setiawan, M. Ilyas, E. Soeyanto, A. S. Riadi, T. Isobe, S. Takahashi and S. Tanabe / pp. 125-131 --- Characterization of Brominated Flame Retardants in House Dust and Their Role as Non-Dietary Source for Human in Indonesia / A. Sudaryanto, T. Isobe, G. Suzuki, I. E. Setiawan, M. Ilyas, A. S. Riyadi, S. Takahashi and S. Tanabe / pp. 133-141 --- Contamination by Brominated Flame Retardants in Soil Samples from Open Dumping Sites of Asian Developing Countries / A. Eguchi, T. Isobe, A. Subramanian, A. Sudaryanto, K. Ramu, T. B. Minh, P. Chakraborty, N. H. Minh, T. S. Tana, P. H. Viet, S. Takahashi and S. Tanabe / pp. 143-151 --- Contamination and Accumulation Feature of Organotin Compounds in Common Cormorants (Phalacrocorax carbo) from Lake Biwa, Japan / H. Mizukawa, S. Takahashi, K. Nakayama, A. Sudo and S. Tanabe / pp. 153-161 --- Quantitative Analysis of Expression of Tributyltin (TBT)-Regulated Genes in TBT-Resistant Pseudomonas aeruginosa 25W / K. Fukushima, S. K. Dubey and S. Suzuki / pp. 163-166 --- Monitoring Trace Elements in Coastal Waters Using Sardine as a Bioindicator / D. Hayase, S. Horai, T. Isobe, T. W. Miller, S. Takahashi, K. Omori and S. Tanabe / pp. 167-175 --- Mass Mortality and Trace Element Residues in Isaza (Gymnogobius isaza) Collected from Lake Biwa, Japan / S. Horai, D. Hayase, S. Takahashi, T. Ishikawa, M. Kumagai and S. Tanabe / pp. 177-183 --- Is Arsenic a Potential Threat for Human Health in Indonesia? / M. Ilyas, A. Sudaryanto, Y. Anantasena, S. Takahashi and S. Tanabe / pp. 185-189 --- Genetic Polymorphism Influencing Arsenic Metabolism in Human / H. Takeshita, J. Fujihara, T. Agusa, S. Takahashi, H. Iwata and S. Tanabe / pp. 191-195 --- Aryl Hydrocarbon Receptor-Mediated Gene Expression by Chlorinated Polycyclic Aromatic Hydrocarbons and Cross-Talk with Estrogen Receptors / H. Sakakibara, T. Ohura, M. Morita, S. Hirabayashi, R. Kuruto-Niwa, T. Amagai and K. Shimoi / pp. 197-202 --- Characterization of the Organohalogen Compounds Which Affect Gene Expressions Mediated by Thyroid Hormone Receptors / H. Sakai, A. Kawashima, Y. Kashima and T. Yamada-Okabe / pp. 203-210 --- Abnormal Response Induced by Pesticides on Mammalian Immune System / S. Nishimoto, K. Kanda, M. Okabe, K. Akiyama, Y. Kakinuma and T. Sugahara / pp. 211-217 --- Paraquat Modulates the Differentiation of C2C12 Cells to Myotube / M. Okabe, K. Akiyama, S. Nishimoto, T. Sugahara and Y. Kakinuma / pp. 219-225 --- Diet as a Modifier of Benzo(a)pyrene Metabolism and Benzo(a)pyrene—Induced Colon Tumors in ApcMin mice / D. L. Harris, M. S. Niaz, J. D. Morrow, M. K. Washington and A. Ramesh / pp. 227-238 --- Occurrence and Concentrations of Persistent Personal Care Products, Organic UV Filters, in the Marine Environment / H. Nakata, S. Murata, R. Shinohara, J. Filatreau, T. Isobe, S. Takahashi and S. Tanabe / pp. 239-246 --- Synthetic Musk Fragrances in Human Breast Milk and Adipose Tissue from Japan / D. Ueno, M. Moribe, K. Inoue, T. Someya, N. Ryuda, M. Ichiba, T. Miyajima, T. Kunisue, H. In, K. Maruo and H. Nakata / pp. 247-252 --- Status of Environmental Contamination in Ghana, the Perspective of a Research Scientist / K. A. Asante and W. J. Ntow / pp. 253-260 --- Pollution Study in Manila Bay: Eutrophication and Its Impact on Plankton Community / K.-H. Chang, A. Amano, T. W. Miller, T. Isobe, R. Maneja, F. P. Siringan, H. Imai and S. Nakano / pp. 261-267 --- Growth Responses of Harmful Algal Species Microcystis (Cyanophyceae) under Various Environmental Conditions / H. Imai, K.-H. Chang and S. Nakano / pp. 269-275 --- Biodegradation of Microcystin-LR by Natural Bacterial Populations / P. M. Manage, C. Edwards and L. A. Lawton / pp. 277-285 --- Changes in Proteolytic Activities in Stored Seawater and Bacterial Isolates / C. W. Bong, Y. Obayashi and S. Suzuki / pp. 287-291 --- Identification of Phenanthrene Metabolites Produced by Polyporus sp. S133 / T. Hadibarata and S. Tachibana / pp. 293-299 --- Enhanced Chrysene Biodegradation in Presence of a Synthetic Surfactant / T. Hadibarata and S. Tachibana / pp. 301-308 --- Oxidative Degradation of Benzo[a]pyrene by the Ligninolytic Fungi / T. Hadibarata / pp. 309-316 --- Microbial Degradation of Crude Oil by Fungi Pre-Grown on Wood Meal / T. Hadibarata and S. Tachibana / pp. 317-322 --- Microbial Degradation of n-Eicosane by Filamentous Fungi / T. Hadibarata and S. Tachibana / pp. 323-329 --- Validity of the New Method for Imogolite Synthesis and Its Genetic Implication / Z. Abidin, N. Matsue and T. Henmi / pp. 331-341

Description / Table of Contents: 1. Introduction --- 2. Phylogeny of the genus Anguilla --- 2-1. Morphological studies --- 2-2. Molecular phylogenetic approaches --- 2-3. A new species in the genus Anguilla --- 3. Life histories of temperate anguillids --- 3-1. Spawning areas of temperate eels --- 3-2. Larval migration of temperate eels --- 3-3. Growth phase and spawning migration --- 4. Population structure of temperate eels --- 5. Life histories of tropical anguillids --- 5-1. Spawning areas of tropical eels --- 5-2. Larval migration of tropical eels --- 5-3. Growth phase and spawning migration --- 6. Population structure of tropical eels --- 7. Discussion --- 7-1. Evolution of migration in anguillid eels --- 7-2. Management and conservation of eel resources

Description / Table of Contents: 1. Introduction --- 2. Biology of leptocephali --- 2-1. Developmental stages --- 2-2. Morphological features --- 2-3. Sensory organs --- 2-4. Feeding ecology --- 2-5. Physiology and energetics --- 2-6. Growth of leptocephali --- 2-7. Metamorphosis --- 2-8. Swimming behavior --- 3. Zoogeography of leptocephali --- 3-1. Taxonomic groups of eels --- 3-2. Spawning areas of eels --- 3-3. Distribution and abundance of leptocephali --- 3-4. Seasonal occurrence of leptocephali --- 4. Ecology of leptocephali --- 4-1. Depth distribution and vertical migration --- 4-2. Survival and predation --- 4-3. Recruitment behavior --- 5. General discussion and future perspectives --- 5-1. Biology of leptocephali --- 5-2. Leptocephalus growth --- 5-3. Zoogeography and diversity of leptocephali --- 5-4. The leptocephalus larval strategy --- 5-5. Oceanic changes and leptocephalus recruitment --- 5-6. Ecological significance of leptocephali in the surface layer --- 5-7. Future research perspectives

Description / Table of Contents: 1. Introduction --- 2. Standard growth formula in fish population dynamics --- 2-1. Traditional growth formulae --- 2-2. Standard formula of RGF in fish population dynamics --- 2-3. Seasonal growth formula --- 2-4. Standard formula for seasonal growth --- 2-5. Parameter estimation and statistical test of growth formulae --- (Example 1) Fitting the growth formula to clam data. --- (Example 2) Fitting VBGF1 for Pacific hake data. --- 2-6. The generalized reproduction model --- 2-7. Parameter estimation for reproduction model --- 2-8. Supplement --- 3. Analysis of the body-size composition --- 3-1. Statistical model --- 3-2. Hasselblad method --- 3-3. Undetermined multiplier method --- 3-4. EM algorithm --- 3-5. Convergence criterion by diminishing mapping --- 3-6. Approximation of the Jacobi method --- 3-7. Difference between the iteration method and the EM algorithm --- (Example 3) Estimation of the age composition for the data of the porgy --- 3-8. Marquardt method --- 4. Estimation of the population size --- 4-1. Petersen method --- (Example 4) Estimation of the 95% interval of N when M = 60, n = 141, and r = 11. --- 4-2. Bayesian statistical method for the Petersen method --- 4-3. Bayesian statistical method by using the hyper-geometric distribution --- 4-4. Quadrat method --- 4-5. Bayesian statistical method for the quadrat method --- (Example 5) Estimation of the 95% interval of n when r = 5 and p = 0.1. --- 4-6. DeLury removal method --- (Example 6) Analysis of the data in Table 5. --- 4-7. Proof of the sum formulae of the binomial distribution and the hyper-geometric distribution --- 5. Survival models --- 5-1. VPA --- 5-2. VPA using mortality rates --- 5-3. Leslie matrix model --- 5-4. Linear programming for fishing equations --- 6. Summary

Description / Table of Contents: Ecosystem Modeling of the Oregon Shelf: Everything but the Kitchen Sink / Y. H. Spitz / pp. 1-9 --- Marine Ecosystem Simulation in the Indonesian Seas / Y. Sasai, A. R. Kartadikaria, Y. Miyazawa and K. Nadaoka / pp. 11-17 --- Response of Nutrients and Primary Production over the Shelf in the East China Sea to the Reduction of Oceanic Nutrient Supply / X. Guo and L. Zhao / pp. 19-30 --- Introduction of the Ecological Connectivity Hypoxia Model: ECOHYM—Model Concept and Its Validation on a Study Applied to Tokyo Bay / A. Sohma / pp. 31-38 --- Ecosystem and Nutrient Dynamics in the Seto Inland Sea, Japan / N. Yoshie, X. Guo, N. Fujii and T. Komorita / pp. 39-49 --- A Numerical Modeling Study of Japanese Sardine (Sardinops melanostictus) Migrations in the Western North Pacific / T. Okunishi, D. Ambe, S. Ito, T. Kameda, T. Setou, K. Komatsu, A. Kawabata, A. Takasuka and H. Kubota / pp. 51-56 --- Investigating Alternate Trophic Pathways through Gelatinous Zooplankton and Planktivorous Fishes in an Upwelling Ecosystem Using End-to-End Models / R. D. Brodeur, J. J. Ruzicka and J. H. Steele / pp. 57-63 --- Establishing a Conceptual Design for Jellyfish Blooms in the Seto Inland Sea / N. Fujii, A. Kaneda, S. Magome and H. Takeoka / pp. 65-71 --- Fate Prediction Model of Organic Chemicals in Coastal Bay Estuaries / K. Nakata, F. Horiguchi and T. Eriguchi / pp. 73-77 --- Ecosystem Analysis of the Seto Inland Sea: Bioaccumulation Model on a Basis of an Energy Balance Model / K. Omori, J. Shibata, H. Hamaoka, K. Matsumoto, T. Nanko, T. Kunihiro, T. W. Miller and H. Onishi / pp. 79-83 --- Trophic Dynamics of Pelagic Nekton in the Southern Benguela Current Ecosystem: Calibrating Trophic Models with Stable Isotope Analysis / C. D. van der Lingen and T. W. Miller / pp. 85-94 --- Tracing Dynamics of Organic Material Flow in Coastal Marine Ecosystems: Results from Manila Bay (Philippines) and Kyucho Intrusion (Japan) / T. W. Miller, G. Jaquinto, M. McGlone, A. Isobe, J. Shibata, H. Hamaoka and K. Omori / pp. 95-104 --- Variations of Seawater Temperature and Coastal Winds from 2003 to 2009 at the Bungo Channel, Japan / R. Shi, X. Guo and H. Takeoka / pp. 105-115 --- Spatial Variation of Submarine Groundwater Discharge (SGD) in the Central Part of Seto Inland Sea, Japan / M. Saito, X. Guo, S. Onodera, Y. Shimizu, Y. Kato, M. Tokumasu and H. Takeoka / pp. 117-123 --- Understanding What Drives Food Web Structure in Marine Pelagic Ecosystems / T. W. Miller, C. van der Lingen, R. Brodeur, K. Omori, H. Hamaoka and T. Isobe / pp. 125-131 --- Study of Sediment Cleanup Using Polychaetes / K. Ito, M. Nozaki, T. Kunihiro, C. Miura and T. Miura / pp. 133-139 --- Regional Characteristics of Lower Trophic Level Food Web Structure in the Seto Inland Sea / J. Shibata, H. Hamaoka, R. Isonaka, K. Matsumoto, T. Nanko, T. W. Miller, H. Onishi, T. Kunihiro and K. Omori / pp. 141-149 --- Sources of Sedimentary Organic Carbon in Mangrove Ecosystems from Ba Lat Estuary, Red River, Vietnam / N. T. Tue, H. Hamaoka, A. Sogabe, T. D. Quy, M. T. Nhuan and K. Omori / pp. 151-157 --- The Fish Composition of Phan Thiet Bay, Binh Thuan Province, Vietnam in Connection with Environmental Quality / N. T. Nam, N. X. Huan, V. T. Tang, T. W. Miller and K. Omori / pp. 159-167 --- The Roles of Marine Phytoplankton and Ocean Circulation in Determining the Global Fate of Polychlorinated Biphenyls / T. Kawai, I. C. Handoh and N. Suzuki / pp. 169-178 --- Bayesian Uncertainty Analysis of the Global Dynamics of Persistent Organic Pollutants: Towards Quantifying the Planetary Boundaries for Chemical Pollution / I. C. Handoh and T. Kawai / pp. 179-187 --- What Drives the Fate of Persistent Organic Pollutants in the North Sea? Insights from a Regional Model / T. Ilyina / pp. 189-195 --- Process Study on Numerical Simulation for Persistent Organic Pollutants in the East China Sea / J. Ono, D. Takahashi, X. Guo, S. Takahashi and H. Takeoka / pp. 197-204 --- Monitoring of Contamination by Non-PBDE Brominated Flame Retardants in Asian Coastal Waters Using Mussels as a Bioindicator / S. Ogawa, T. Isobe, K. Ramu, A. Subramanian, S. Takahashi and S. Tanabe / pp. 205-211 --- Inter-species Differences of Hydroxylated Polychlorinated Biphenyls (OHPCBs) in the Blood of Small Cetaceans / M. Ochiai, K. Nomiyama, T. Isobe, T. Matsuishi, T. K. Yamada and S. Tanabe / pp. 213-220 --- Accumulation of Brominated Flame Retardants in Harbour and Dall's Porpoises from Hokkaido / A. Saito, T. Isobe, T. Matsuishi, T. K. Yamada, Y. Tajima and S. Tanabe / pp. 221-228 --- Contamination by Brominated Flame Retardants (BFRs) in Common Cormorants from Lake Biwa / R. Hashikawa, T. Isobe, S. Yano, T. Kunisue, K. Nakayama, A. Sudo, S. Takahashi and S. Tanabe / pp. 229-238 --- Formulation of Leeway-Drift Velocities for Sea-Surface Drifting-Objects Based on a Wind-Wave Flume Experiment / A. Isobe, H. Hinata, S. Kako and S. Yoshioka / pp. 239-249 --- Investigating the Accumulation of Plastic Debris in the North Pacific Gyre / J. J. Leichter / pp. 251-259 --- Deep-Sea Litter Study Using Deep-Sea Observation Tools / H. Miyake, H. Shibata and Y. Furushima / pp. 261-269 --- Toxic Metals in Polyethylene Plastic Litter / E. Nakashima, A. Isobe, S. Kako, S. Magome, N. Deki, T. Itai and S. Takahashi / pp. 271-277

Description / Table of Contents: PART I. INTRODUCTION --- 1. Background and overview of the JSPS Coastal Marine Science Program / Shuhei Nishida, Nobuyuki Miyazaki and Miguel D. Fortes / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 3-10 --- PART II. SCIENTIFIC ACCOMPLISHMENTS --- 2. Water circulation and material transport in the coastal areas and marginal seas of East and Southeast Asia (Project-1) / Tetsuo Yanagi / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 13-22 --- 3. Ecology and oceanography of harmful marine microalgae (Project-2) / Yasuwo Fukuyo, Masaaki Kodama, Takuo Omura, Ken Furuya, Elsa F. Furio, Mirriam Cayme, Lim Po Teen, Dao Viet Ha, Yuichi Kotaki, Kazumi Matsuoka, Mitsunori Iwataki, Rujinard Sriwoon and Thaithaworn Lirdwitayaprasit / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 23-48 --- 4. Biodiversity studies on seaweeds and sea grasses in the coastal waters of Southeast Asia (Project-3: Seaweed/seagrass Group) / Shigeo Kawaguchi and Ken-ichi Hayashizaki / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 49-57 --- 5. Biodiversity of marine zooplankton in Southeast Asia (Project-3: Plankton Group) / Shuhei Nishida and Jun Nishikawa / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 59-71 --- 6. Fish diversity studies in the JSPS Coastal Marine Science Program (Project-3: Fish Group) / Keiichi Matsuura / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 73-79 --- 7. Biodiversity of benthos in the coastal waters of Southeast Asia (Project-3: Benthos Group) / Yoshihisa Shirayama / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 81-85 --- 8. Pollution of hazardous chemicals in the coastal marine environment and their ecological effect (Project-4) / Koji Inoue and Nobuyuki Miyazaki / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 87-101 --- PART III. CAPACITY BUILDING AND OUTREACH --- 9. Material transport: Capacity building in Project-1 / Tetsuo Yanagi / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 105-106 --- 10. Harmful algal blooms: Capacity building in Project-2 / Yasuwo Fukuyo and Masaaki Kodama / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 107-109 --- 11. Biodiversity of seaweeds and sea grasses: Capacity building in Project-3 / Shigeo Kawaguchi / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 111-116 --- 12. Biodiversity of zooplankton: Capacity building in Project-3 / Shuhei Nishida / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 117-123 --- 13. Biodiversity of fishes: Capacity building in Project-3 / Keiichi Matsuura / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 125-128 --- 14. Biodiversity of benthos: Capacity building in Project-3 / Yoshihisa Shirayama / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 129-134 --- 15. Marine pollution: Capacity building in Project-4 / Koji Inoue and Nobuyuki Miyazaki / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 135-141 --- PART IV. COORDINATION IN MEMBER COUNTRIES --- 16. JSPS Coastal Marine Science Program in Indonesia / Suharsono / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 145-161 --- 17. JSPS Coastal Marine Science Program in Malaysia / Mohd Ibrahim Seeni Mohd / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 163-171 --- 18. The Philippine JSPS Coastal Marine Science Program: Status, problems and perspectives / Miguel D. Fortes / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 173-187 --- 19. Research coordination of JSPS Coastal Marine Science Program in Thailand / Charoen Nitithamyong / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 189-199 --- 20. National coordination of the JSPS Coastal Marine Science Program in Vietnam / Tran Duc Thanh / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 201-209 --- PART V. GENERAL SUMMARY --- 21. Synthesis, challenges and future prospects / Shuhei Nishida, Nobuyuki Miyazaki and Miguel D. Fortes / S. Nishida, M. D. Fortes and N. Miyazaki, eds. / Coastal Marine Science in Southeast Asia—Synthesis Report of the Core University Program of the Japan / pp. 213-216 --- Appendix-1. Directory of Project Members / pp. 217-250 --- Appendix-2. Publications / pp. 251-315

Description / Table of Contents: Fish Immunotoxicology: Research at the Crossroads of Immunology, Ecology and Toxicology / H. Segner, A. M. Möller, M. Wenger and A. Casanova-Nakayama / pp. 1-12 --- Homology Modeling of the Mysid Ecdysone Receptor and Docking Simulation with Ecdysteroids / M. Hirano, H. Ishibashi, E.-Y. Kim, K. Arizono and H. Iwata / pp. 13-18 --- Effects of 2,3,7,8-Tetrachlorodibenzo-p-Dioxin (TCDD) on the Peripheral Nervous System in Developing Red Seabream (Pagrus major) Embryos / M. Iida, E.-Y. Kim, Y. Murakami, Y. Shima and H. Iwata / pp. 19-24 --- Evaluation of Quantitative-Extra Long PCR to Assess Levels of DNA Damage in an Estuarine Fish Population / N. K. Roy and I. Wirgin / pp. 25-34 --- The Synthesis and Role of Taurine in the Eel Spermatogenesis / M. Higuchi, F. T. Celino, C. Miura and T. Miura / pp. 35-40 --- Establishment of the Protocol for Developmental Analysis and Observation of Embryogenesis and Axonogenesis in a Freshwater Goby, Rhinogobius flumineus / M. Kawaguchi, J. Shibata, R. Kawanishi, A. Sogabe, T. Kawanaka, K. Matsumoto, K. Omori and Y. Murakami / pp. 41-48 --- Transgenic Medaka, Small Fresh Water Teleost (Oryzias latipes), is Now Available for Environmental Science / M. Kinoshita / pp. 49-54 --- Physiological Effects of 3 Non-PBDE Brominated Flame Retardants on Pimephales promelas (Fathead Minnow) Exposed in Outdoor Mesocosms / B. de Jourdan, K. Oakes, M. Hanson, P. Sibley, M. Servos, D. Muir and K. Solomon / pp. 55-66 --- Use of Physiologically Based Pharmacokinetic (PBPK) Models in Marine Mammal Toxicology / L. Weijs, R. S. H. Yang, K. Das, R. Blust and A. Covaci / pp. 67-72 --- Applicability of Human Hair as a Bioindicator for Trace Elements Exposure / T. Noguchi, T. Itai, M. Kawaguchi, S. Takahashi and S. Tanabe / pp. 73-77 --- Application of Denaturing Gradient Gel Electrophoresis as an Ecotoxicological Tool to Investigate the Effects of aqu-Fullerene on a Bacterial Community / R. A. Kanaly, A. H. Maeda, M. Kunihiro and N. Hamamura / pp. 79-88 --- Iodide Oxidizing Activity of Bacteria from Subsurface Sediments of the Savannah River Site, SC, U.S.A. / H.-P. Li, R. Brinkmeyer, W. L. Jones, S. Zhang, C. Xu, Y.-F. Ho, K. A. Schwehr, D. I. Kaplan, P. H. Santschi and C. M. Yeager / pp. 89-97 --- Identification of Bacterial Community and Arsenate-Reducing Bacteria Associated with a Soda Lake in Khovsgol, Mongolia / N. Hamamura, Y. Liu and W. P. Inskeep / pp. 99-107 --- Arsenic Contamination of Paddy Fields through Groundwater Irrigation in Bangladesh: Risks for Rice Production and Mitigation Perspectives / L. C. Roberts, S. J. Hug, J. Dittmar, A. Voegelin, R. Kretzschmar, B. Wehrli, G. C. Saha, M. A. Ali and A. B. M. Badruzzaman / pp. 109-115 --- Arsenic Release and Transport in Sediments of the Mekong Delta / B. D. Kocar and S. Fendorf / pp. 117-124 --- Exposure, Metabolism, and Effects of Arsenic in Residents from Arsenic-contaminated Groundwater Areas of Southeast Asia / T. Agusa, T. Kunito, R. Kubota, S. Tanabe and H. Iwata / pp. 125-132 --- Mobilization of Manganese and Arsenic under Hypoxia in the Bottom of Lake Biwa / Y. Hyobu, T. Itai, D. Hayase, M. Kumagai and S. Tanabe / pp. 133-140 --- Spatial Profile of Trace Elements in Marine Sediments from Jakarta Bay, Indonesia / A. S. Riyadi, T. Itai, T. Isobe, M. Ilyas, A. Sudaryanto, I. E. Setiawan, S. Takahashi and S. Tanabe / pp. 141-150 --- A Comparative Study on Temporal Trends of Trace Elements in Harbor Porpoise (Phocoena phocoena) from Coastal Waters of North Japan / Y. Yasuda, S. Hirata, T. Itai, T. Isobe, T. Matsuishi, T. K. Yamada, Y. Tajima, S. Takahashi and S. Tanabe / pp. 151-159 --- Trace Element Contamination around the E-waste Recycling Site at Agbogbloshie, Accra City, Ghana / M. Otsuka, T. Itai, K. A. Asante, M. Muto and S. Tanabe / pp. 161-167 --- Bioaccumulation of Trace Elements in Marine Organisms from Deep-Waters of Off-Sanninn and Off-Hokuriku, Japan / H. Adachi, T. Itai, S. Takahashi, T. Kubodera, S. Haruta and S. Tanabe / pp. 169-176 --- Organohalogen Compounds and Their Metabolites in the Blood of Japanese Amberjack and Scalloped Hammerhead Shark from Japanese Coastal Waters / K. Nomiyama, Y. Uchiyama, S. Horiuchi, A. Eguchi, C. Kanbara, S. Horai-Hirata, R. Shinohara and S. Tanabe / pp. 177-185 --- Accumulation of Halogenated Phenolic Compounds in Small Toothed Whales / M. Ochiai, K. Nomiyama, T. Isobe, T. K. Yamada, Y. Tajima, T. Matsuishi, M. Amano and S. Tanabe / pp. 187-192 --- Accumulation Features of Halogenated Phenolic Compounds in the Blood of Pinnipeds from Japanese Coastal Waters / C. Kanbara, K. Nomiyama, H. Mizukawa, A. Eguchi, T. Isobe, T. K. Yamada and S. Tanabe / pp. 193-202 --- Accumulation Features of Organohalogen Metabolites in the Blood of Japanese Terrestrial Mammals / H. Mizukawa, K. Nomiyama, S. Nakatsu, S. Yachimori, T. Hayashi, Y. Tashiro, M. Yamamoto and S. Tanabe / pp. 203-210 --- Contamination Status and Accumulation Features of Organohalogen Compounds in Raccoon Dog and Masked Palm Civet / M. Yamamoto, T. Isobe, T. Hayashi, S. Yachimori, K. Nomiyama and S. Tanabe / pp. 211-219 --- Polychlorinated Biphenyls and Polybrominated Diphenyl Ethers in Fishes Collected from Tam Giang-Cau Hai Lagoon, Vietnam / P. T. Hien, N. M. Tue, G. Suzuki, S. Takahashi and S. Tanabe / pp. 221-227 --- Contamination of Brominated Flame Retardants (BFRs) in Human Hair from E-waste Recycling Site in Vietnam / M. Muto, T. Isobe, K. Ramu, N. M. Tue, P. H. Viet, S. Takahashi and S. Tanabe / pp. 229-237 --- Determination of Perfluoroalkyl Compounds in Aqueous Samples from Northern Vietnam / T. Isobe, J.-W. Kim, N. M. Tue, K. Misaki, S. Takahash, P. H. Viet and S. Tanabe / pp. 239-244 --- Concentrations of Perfluorinated Compounds in Tap Water and Human Serum from Osaka, Japan / S. Takagi, J. Yoshida and F. Adachi / pp. 245-251 --- Hexabromocyclododecane Levels in Foodstuff and Human Breast Milk in Osaka, Japan / K. Kakimoto, K. Akutsu, Y. Konishi, A. Toriba and K. Hayakawa / pp. 253-259 --- Analysis of Benzotriazole UV Stabilizers in House Dust Using an UHPLC-MS/MS / J.-W. Kim, T. Isobe, G. Malarvannan, A. Sudaryanto, K.-H. Chang, M. Prudente and S. Tanabe / pp. 261-267 --- Contamination Status of Polychlorinated Biphenyls and Brominated Flame Retardants in Environmental and Biota Samples from India / G. Devanathan, T. Isobe, A. Subramanian, K. A. Asante, S. Natarajan, P. Palaniappan, S. Takahashi and S. Tanabe / pp. 269-277 --- Fireworks Displays and Production as a Perchlorate Emission Source / R. Sugimoto, T. Isobe, K. Ramu, G. Malarvannan, G. Devanthan, A. Subramanian and S. Tanabe / pp. 279-284 --- Atmospheric Deposition of Polychlorinated Naphthalenes in Dongjiang River Basin of Guangdong Province, South China / Y. Wang, Z. N. Cheng, J. Li, C. L. Luo, X. Liu and G. Zhang / pp. 285-293 --- Changes of Persistent Organic Pollutants in Atmospheric Concentration and Soil Load in the UK and Norway over 10 Years / J. K. Schuster, R. Gioia, C. Moeckel, T. Agarwal, T. D. Bucheli, K. Breivik, E. Steinnes and K. C. Jones / pp. 295-302 --- Inter-Congener Variability in the Global Dynamics of Polychlorinated Biphenyls: A Message from Finely-Advanced Transboundary Environmental Model (FATE) / T. Kawai, N. Suzuki and I. C. Handoh / pp. 303-309 --- Modeling of Suspended Particulate Matter in the East China Sea / J. Ono and X. Guo / pp. 311-319 --- Toxic Metals Derived from Plastic Litter on a Beach / E. Nakashima, A. Isobe, S. Kako, T. Itai and S. Takahashi / pp. 321-328 --- Radon and Radium Isotopes, Groundwater Discharge and Harmful Algal Blooms in Little Lagoon, Alabama / N. Su, W. C. Burnett, K. T. Eller, H. L. MacIntyre, B. Mortazavi, J. D. Liefer and L. Novoveská / pp. 329-337 --- Seasonal Variation of the 222Rn Concentration in the Central Part of the Seto Inland Sea, Japan / M. Saito, S. Onodera, X. Guo, K. Onishi, Y. Shimizu, M. Yoshikawa, G. Jin, M. Tokumasu and H. Takeoka / pp. 339-344 --- Development of an On-site Simplified Determination Method for Hydrogen Sulfide in Marine Sediment Pore Water Using a Shipboard Ion Electrode with Consideration of Hydrogen Sulfide Oxidation Rate / S. Asaoka, T. Yamamoto, Y. Takahashi, H. Yamamoto, K. H. Kim and K. Orimoto / pp. 345-352 --- The Effect of Microphytobenthic Resuspension on Suspended Particulate Matter Dynamics in a Shallow Lagoon in Hokkaido, Japan / N. Suga and S. Montani / pp. 353-365 --- Occurrence of Tetracycline Resistant Bacteria and tet(M) Gene in Seawater from Korean Coast / S.-j. Kim, M. Ogo, M.-J. Oh and S. Suzuki / pp. 367-375 --- Vertical Community Structure of Bacteria and Phytoplankton in Lake Biwa Using Respiratory Quinone and Pigment Analysis / H. Takasu, T. Kunihiro and S. Nakano / pp. 377-385 --- Deterioration of Soft Bottom Macroinfaunal Communities in a Milkfish Mariculture Zone off Bolinao-Anda, Pangasinan (NW Philippines) / H. M. E. Nacorda, J. M. Obliosca, M. C. L. Tentia, G. S. Jacinto and M. L. C. San Diego-McGlone / pp. 387-395 --- Relative Biomass of Bacteria and Microphytobenthos in Surface Sediments of the Seto Inland Sea of Japan / T. Kunihiro, J. Shibata, H. Hamaoka, A. Sogabe, K. Moriya, M. Kuwae, K. Ito, A. Katayama, H. Tsutsumi and K. Omori / pp. 397-406 --- Bacterial Community should be Considered in Ecosystem Model in the Ocean?—Comparison between Community-Based Model, Black Box Model, and Exponential Decay Model / T. Miki / pp. 407-418 --- A Mini-Review of Spatial Segregation of Aquatic Food Webs: Stable Isotope Technique and Human Impact / H. Doi / pp. 419-425 --- Contribution of Pelagic and Benthic Grazing and Detritus Food Chains to the Coastal Ecosystem of the Western Seto Inland Sea: A Stable Isotope and Bayesian Mixing Model Analysis Approach / J. Shibata, K. Matsumoto, H. Hamaoka, A. Sogabe, T. Nanko, T. Kunihiro, H. Onishi and K. Omori / pp. 427-435 --- Contamination Status and Geographical Distribution of Polybrominated Diphenyl Ethers, Hexabromocyclododecanes and Polychlorinated Biphenyls in Fish and Shellfish from the Seto Inland Sea, Japan / H. Hamada, T. Isobe, K.-H. Chang, J. Shibata, A. Sogabe, K. Ohmori and S. Tanabe / pp. 437-445 --- Applying Trophic Tracers to Study Contaminant Levels and Trends in Arctic Marine Wildlife and Food Webs: A Review / M. A. McKinney / pp. 447-454 --- Comparison of Marine Food Webs across Environmental Gradients—A Tool for Unraveling Environmental Factors Driving Trophic Structure / T. W. Miller / pp. 455-461 --- Depth Profiles of δ13C and Trace Element Concentrations in Mangrove Ecosystem of Tien Hai Natural Reserve, Vietnam / N. T. Tue, T. D. Quy, H. Hamaoka, L. V. Dung, M. T. Nhuan and K. Omori / pp. 463-470