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  • Articles  (716)
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  • 1
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.33 (2014) nr.1 p.155
    Publication Date: 2015-04-20
    Description: Identification of fungi and the International Code of Nomenclature underpinning this process, rests strongly on the characterisation of morphological structures. Yet, the value of these characters to define species in many groups has become questionable or even superfluous. This has emerged as DNA-based techniques have increasingly revealed cryptic species and species complexes. This problem is vividly illustrated in the present study where 105 isolates of the Botryosphaeriales were recovered from both healthy and diseased woody tissues of native Acacia spp. in Namibia and South Africa. Thirteen phylogenetically distinct groups were identified based on Internal Transcribed Spacer (ITS) rDNA PCR-RFLP and translation elongation factor 1-α (TEF1-α) sequence data, two loci that are known to be reliable markers to distinguish species in the Botryosphaeriales. Four of these groups could be linked reliably to sequence data for formerly described species, including Botryosphaeria dothidea, Dothiorella dulcispinae, Lasiodiplodia pseudotheobromae and Spencermartinsia viticola. Nine groups, however, could not be linked to any other species known from culture and for which sequence data are available. These groups are, therefore, described as Aplosporella africana, A. papillata, Botryosphaeria auasmontanum, Dothiorella capri-amissi, Do. oblonga, Lasiodiplodia pyriformis, Spencermartinsia rosulata, Sphaeropsis variabilis and an undescribed Neofusicoccum sp. The species described here could not be reliably compared with the thousands of taxa described in these genera from other hosts and regions, where only morphological data are available. Such comparison would be possible only if all previously described taxa are epitypified, which is not a viable objective for the two families, Botryosphaeriaceae and Aplosporellaceae, in the Botryosphaeriales identified here. The extent of diversity of the Botryosphaeriales revealed in this and other recent studies is expected to reflect that of other undersampled regions and hosts, and illustrates the urgency to find more effective ways to describe species in this, and indeed other, groups of fungi.
    Keywords: Botryosphaeriales ; morphotaxa ; phylogeny ; taxonomy ; tree health
    Repository Name: National Museum of Natural History, Netherlands
    Type: Article / Letter to the editor
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  • 2
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.32 (2014) nr.1 p.1
    Publication Date: 2015-04-20
    Description: Dothiorella and Spencermartinsia are two botryosphaeriaceous genera with dark 2-celled conidia and found in parasitic, saprophytic or endophytic association with various woody host plants. Based on ITS and EF1-α sequence data and morphology, eight new species are described from Iran, New Zealand, Portugal and Spain. Of these, five species are placed in Dothiorella, namely D. iranica, D. parva, D. prunicola, D. sempervirentis and D. striata, and three species belong to Spencermartinsia named as S. citricola, S. mangiferae and S. plurivora. An identification key to the species of each genus is provided.
    Keywords: Botryosphaeriaceae ; Dothiorella ; ITS ; phylogeny ; Spencermartinsia ; systematics ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 3
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.59 (2014) nr.1 p.1
    Publication Date: 2015-03-06
    Description: A new species of Herpetospermum (Schizopeponeae, Cucurbitaceae) is described from north-eastern India, northern Myanmar and southwest China (Xizang and Yunnan). Herpetospermum operculatum was previously confused with Herpetospermum (= Biswarea) tonglense, but differs primarily in having smooth yellow-striped fruit with operculum at stylar end, ascendent seed arrangement in fruit and prominent probracts and bracts. At least a part of the collections of Herpetospermum tonglense in Myanmar and China represent misidentification of this species.
    Keywords: China ; Herpetospermum tonglense ; misidentification ; Myanmar ; north-eastern India ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 4
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.32 (2014) nr.1 p.25
    Publication Date: 2015-04-20
    Description: Based on analyses of concatenated internal transcribed spacer regions of the nrDNA operon (ITS), large subunit rDNA (LSU), γ-actin and β-tubulin gene sequences the taxonomy of coniothyrium-like fungi belonging in the family Montagnulaceae, order Pleosporales, was re-assessed. Two new genera are proposed, Alloconiothyrium, to accommodate A. aptrootii sp. nov., and Dendrothyrium for D. longisporum sp. nov. and D. variisporum sp. nov. One new species is described in Paraconiothyrium, viz. Parac. archidendri sp. nov., while two species so far classified in Paraconiothyrium are transferred to Paraphaeosphaeria, viz. Paraph. minitans comb. nov. and Paraph. sporulosa comb. nov. In Paraphaeosphaeria five new species are described based on asexual morphs, viz. Paraph. arecacearum sp. nov., Paraph. neglecta sp. nov., Paraph. sardoa sp. nov., Paraph. verruculosa sp. nov., and Paraph. viridescens sp. nov. Macro- and micromorphological characteristics are fully described.
    Keywords: γ-actin ; β-tubulin ; ITS ; LSU ; Microsphaeropsis ; Paraconiothyrium ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 5
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.59 (2014) nr.2 p.131
    Publication Date: 2015-03-06
    Description: The genus Oxalis in southern Africa contains more than 200 species, with the vast bulk of species in the Greater Cape Floristic Region (GCFR). Recent fieldwork has suggested that many await discovery. Here we investigate the identity of two apparently undescribed Oxalis species from Northern Cape, South Africa, using morphological comparisons with closely related taxa. We provide a preliminary phylogenetic placement using DNA sequence-based analyses of the Internal Transcribed Spacer (ITS) region. Both putative new species are distinguished from all known Oxalis species based on macro-morphological traits. Molecular data placed both within a clade consisting of the weedy O. pes-caprae and its close relatives. Oxalis hirsutibulba sp. nov. is characterised by densely hairy bulb tunics, a trait absent from all known members of the O. pes-caprae clade. Oxalis fenestrata sp. nov. is unique in producing apple green succulent stems and leaflets usually with translucent white markings at their incisions. We also provide the first phylogenetic placement of the GCFR narrow endemic O. lasiorrhiza in the O. pes-caprae clade. In conjunction with several other recent discoveries, these two new species and the phylogenetic placement of O. lasiorrhiza show that the O. pes-caprae clade is much more speciose than previously estimated.
    Keywords: New species ; Oxalidaceae ; Oxalis ; phylogeny ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 6
    Publication Date: 2015-04-20
    Description: Cortinarius is a species-rich and morphologically challenging genus with a cosmopolitan distribution. Many names have not been used consistently and in some instances the same species has been described two or more times under separate names. This study focuses on subg. Phlegmacium as traditionally defined and includes species from boreal and temperate areas of the northern hemisphere. Our goals for this project were to: i) study type material to determine which species already have been described; ii) stabilize the use of Friesian and other older names by choosing a neo- or epitype; iii) describe new species that were discovered during the process of studying specimens; and iv) establish an accurate ITS barcoding database for Phlegmacium species. A total of 236 types representing 154 species were studied. Of these 114 species are described only once whereas 40 species had one ore more synonyms. Of the names studied only 61 were currently represented in GenBank. Neotypes are proposed for 21 species, and epitypes are designated for three species. In addition, 20 new species are described and six new combinations made. As a consequence ITS barcodes for 175 Cortinarius species are released.
    Keywords: Basidiomycota ; diversity ; DNA barcoding ; ITS ; taxonomy ; typification
    Repository Name: National Museum of Natural History, Netherlands
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  • 7
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.33 (2014) nr.1 p.1
    Publication Date: 2015-04-20
    Description: The Teratosphaeriaceae represents a recently established family that includes numerous saprobic, extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also provide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub, Act, RPB2, EF-1α and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease of Eucalyptus, leading to the introduction of 23 novel genera, five species and 48 new combinations. Species are distinguished based on a polyphasic approach, combining morphological, ecological and phylogenetic species concepts, named here as the Consolidated Species Concept (CSC). From the DNA sequence data generated, we show that each one of the five coding genes tested, reliably identify most of the species present in this dataset (except species of Pseudocercospora). The ITS gene serves as a primary barcode locus as it is easily generated and has the most extensive dataset available, while either Btub, EF-1α or RPB2 provide a useful secondary barcode locus.
    Keywords: Eucalyptus ; multi-locus ; phylogeny ; species concepts ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 8
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.59 (2014) nr.1 p.19
    Publication Date: 2015-03-06
    Description: Genus Maerua has around 60 species represented on the African continent, of which three have been reported for Angola. Two new species of Maerua (Capparaceae) from Angola are here described. Both are closely similar to M. juncea subsp. juncea, being distinguished by floral traits such as the receptacle, androphore and gynophore (M. pintobastoae) or leaf traits such as venation, as well as size and shape of the ovary and disc shape (M. mendesii). A key for Maerua species occurring in Angola is provided, as well as a table summarizing and comparing the morphological characters for the new species and similar African species. With the description of these two new species, the genus Maerua comprises five species in Angola. Resumo O género Maerua tem cerca de 60 espécies representadas no continente Africano, das quais 3 foram já reportadas para Angola. São aqui descritas duas novas espécies de Maerua (Capparaceae) de Angola, ambas estreitamente semelhantes com M. juncea subsp. juncea, da qual diferem por carateres florais como o recetáculo, andróforo e ginóforo (M. pintobastoae) ou por caracteres foliares como nervação, bem como tamanho e forma do ovário e forma do disco (M. mendesii). Apresenta-se uma chave das espécies de Maerua que ocorrem em Angola, bem como uma tabela comparativa das características morfológicas de cada uma das novas espécies com espécies africanas similares. Considerando as novas espécies descritas, o género Maerua compreende cinco espécies com ocorrência confirmada em Angola.
    Keywords: Angola ; Capparaceae ; endemism ; Maerua ; Southern Africa ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 9
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.59 (2014) nr.1 p.33
    Publication Date: 2015-03-06
    Description: A new species of Gesneriaceae from south-western Guangxi, China, Petrocodon villosus, is described and illustrated. It resembles P. ferrugineus, but is differentiated by several characters, such as the size of bracts, calyx and corolla, the indumentum of leaf blades, calyx, filaments and the outside of the corolla; the corolla tube shape, limb and lobes, the disc and stigma. A description of P. villosus, together with illustrations, habitat description and a diagnostic comparison are presented.
    Keywords: Gesneriaceae ; Guangxi ; new species ; Petrocodon ; P. villosus ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 10
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.59 (2014) nr.2 p.103
    Publication Date: 2015-03-06
    Description: Licania subg. Angelesia is composed of only three species restricted to Southeast Asia and is currently delimited as one of four subgenera of Licania, a species-rich genus of mostly Neotropical taxa. Molecular phylogenetic studies involving Chrysobalanaceae have revealed that Licania is polyphyletic. Here we propose to re-establish Licania subg. Angelesia to generic rank based on molecular and morphological evidence and the three species currently placed in Licania subg. Angelesia (Licania fusicarpa, L. palawanensis and L. splendens) are here re-instated and transferred to Angelesia, as appropriate. This new generic delimitation renders Licania an exclusively Neotropical genus, and Angelesia an endemic Southeast Asian genus.
    Keywords: Licania ; pantropical ; polyphyletic ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 11
    Publication Date: 2024-01-12
    Description: Eumycetoma is a chronic fungal infection characterised by large subcutaneous masses and the presence of sinuses discharging coloured grains. The causative agents of black-grain eumycetoma mostly belong to the orders Sordariales and Pleosporales. The aim of the present study was to clarify the phylogeny and taxonomy of pleosporalean agents, viz. Madurella grisea, Medicopsis romeroi (syn.: Pyrenochaeta romeroi), Nigrograna mackinnonii (syn. Pyrenochaeta mackinnonii), Leptosphaeria senegalensis, L. tompkinsii, and Pseudochaetosphaeronema larense. A phylogenetic analysis based on \xef\xac\x81ve loci was performed: the Internal Transcribed Spacer (ITS), large (LSU) and small (SSU) subunit ribosomal RNA, the second largest RNA polymerase subunit (RPB2), and translation elongation factor 1-alpha (TEF1) gene. In addition, the morphological and physiological characteristics were determined. Three species were well-resolved at the family and genus level. Madurella grisea, L. senegalensis, and L. tompkinsii were found to belong to the family Trematospheriaceae and are reclassi\xef\xac\x81ed as Trematosphaeria grisea comb. nov., Falciformispora senegalensis comb. nov., and F. tompkinsii comb. nov. Medicopsis romeroi and Pseudochaetosphaeronema larense were phylogenetically distant and both names are accepted. The genus Nigrograna is reduced to synonymy of Biatriospora and therefore N. mackinnonii is reclassi\xef\xac\x81ed as B. mackinnonii comb. nov. Mycetoma agents in Pleosporales were phylogenetically quite diverse despite their morphological similarity in the formation of pycnidia, except for the ascosporulating genus Falciformispora (formerly in Leptosphaeria). Most of the species diagnosed from human mycetoma were found to be related to waterborne or marine fungi, suggesting an association of the virulence factors with oligotrophism or halotolerance.
    Keywords: Madurella ; mycetoma ; Pleosporales ; taxonomy ; Trematosphaeriaceae
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 12
    Publication Date: 2024-01-12
    Description: Numerous members of Ascomycota and Basidiomycota produce only poorly differentiated arthroconidial asexual morphs in culture. These arthroconidial fungi are grouped in genera where the asexual-sexual connections and their taxonomic circumscription are poorly known. In the present study we explored the phylogenetic relationships of two of these ascomycetous genera, Arthrographis and Arthropsis. Analysis of D1/D2 sequences of all species of both genera revealed that both are polyphyletic, with species being accommodated in different orders and classes. Because genetic variability was detected among reference strains and fresh isolates resembling the genus Arthrographis, we carried out a detailed phenotypic and phylogenetic analysis based on sequence data of the ITS region, actin and chitin synthase genes. Based on these results, four new species are recognised, namely Arthrographis chlamydospora, A. curvata, A. globosa and A. longispora. Arthrographis chlamydospora is distinguished by its cerebriform colonies, branched conidiophores, cuboid arthroconidia and terminal or intercalary globose to subglobose chlamydospores. Arthrographis curvata produced both sexual and asexual morphs, and is characterised by navicular ascospores and dimorphic conidia, namely cylindrical arthroconidia and curved, cashew-nut-shaped conidia formed laterally on vegetative hyphae. Arthrographis globosa produced membranous colonies, but is mainly characterised by doliiform to globose arthroconidia. Arthrographis longispora also produces membranous colonies, but has poorly differentiated conidiophores and long arthroconidia. Morphological variants are described for A. kalrae and our results also revealed that Eremomyces langeronii and A. kalrae, traditionally considered the sexual and asexual morphs of the same species, are not conspecific.
    Keywords: Arthroconidial fungi ; Arthrographis ; Arthropsis ; Eremomyces ; phylogeny ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 13
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 59 no. 1, pp. 19-25
    Publication Date: 2024-01-12
    Description: Genus Maerua has around 60 species represented on the African continent, of which three have been reported for Angola. Two new species of Maerua (Capparaceae) from Angola are here described. Both are closely similar to M. juncea subsp. juncea, being distinguished by floral traits such as the receptacle, androphore and gynophore (M. pintobastoae) or leaf traits such as venation, as well as size and shape of the ovary and disc shape (M. mendesii). A key for Maerua species occurring in Angola is provided, as well as a table summarizing and comparing the morphological characters for the new species and similar African species. With the description of these two new species, the genus Maerua comprises five species in Angola.\nResumo O g\xc3\xa9nero Maerua tem cerca de 60 esp\xc3\xa9cies representadas no continente Africano, das quais 3 foram j\xc3\xa1 reportadas para Angola. S\xc3\xa3o aqui descritas duas novas esp\xc3\xa9cies de Maerua (Capparaceae) de Angola, ambas estreitamente semelhantes com M. juncea subsp. juncea, da qual diferem por carateres florais como o recet\xc3\xa1culo, andr\xc3\xb3foro e gin\xc3\xb3foro (M. pintobastoae) ou por caracteres foliares como nerva\xc3\xa7\xc3\xa3o, bem como tamanho e forma do ov\xc3\xa1rio e forma do disco (M. mendesii). Apresenta-se uma chave das esp\xc3\xa9cies de Maerua que ocorrem em Angola, bem como uma tabela comparativa das caracter\xc3\xadsticas morfol\xc3\xb3gicas de cada uma das novas esp\xc3\xa9cies com esp\xc3\xa9cies africanas similares. Considerando as novas esp\xc3\xa9cies descritas, o g\xc3\xa9nero Maerua compreende cinco esp\xc3\xa9cies com ocorr\xc3\xaancia confirmada em Angola.
    Keywords: Angola ; Capparaceae ; endemism ; Maerua ; Southern Africa ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 14
    Publication Date: 2024-01-12
    Description: Dothiorella and Spencermartinsia are two botryosphaeriaceous genera with dark 2-celled conidia and found in parasitic, saprophytic or endophytic association with various woody host plants. Based on ITS and EF1-\xce\xb1 sequence data and morphology, eight new species are described from Iran, New Zealand, Portugal and Spain.\nOf these, five species are placed in Dothiorella, namely D. iranica, D. parva, D. prunicola, D. sempervirentis and D. striata, and three species belong to Spencermartinsia named as S. citricola, S. mangiferae and S. plurivora. An identification key to the species of each genus is provided.
    Keywords: Botryosphaeriaceae ; Dothiorella ; ITS ; phylogeny ; Spencermartinsia ; systematics ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 15
    Publication Date: 2024-01-12
    Description: Cortinarius is a species-rich and morphologically challenging genus with a cosmopolitan distribution. Many names have not been used consistently and in some instances the same species has been described two or more times under separate names. This study focuses on subg. Phlegmacium as traditionally de\xef\xac\x81ned and includes species from boreal and temperate areas of the northern hemisphere. Our goals for this project were to: i) study type material to determine which species already have been described; ii) stabilize the use of Friesian and other older names by choosing a neo- or epitype; iii) describe new species that were discovered during the process of studying specimens; and iv) establish an accurate ITS barcoding database for Phlegmacium species. A total of 236 types representing 154 species were studied. Of these 114 species are described only once whereas 40 species had one ore more synonyms. Of the names studied only 61 were currently represented in GenBank. Neotypes are proposed for 21 species, and epitypes are designated for three species. In addition, 20 new species are described and six new combinations made. As a consequence ITS barcodes for 175 Cortinarius species are released.
    Keywords: Basidiomycota ; diversity ; DNA barcoding ; ITS ; taxonomy ; typi\xef\xac\x81cation
    Repository Name: National Museum of Natural History, Netherlands
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  • 16
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 33 no. 1, pp. 41-47
    Publication Date: 2024-01-12
    Description: Ustilaginomycotina (Basidiomycota, Fungi) has been reclassi\xef\xac\x81ed recently based on multiple gene sequence analyses. However, the phylogenetic placement of two yeast-like genera Malassezia and Moniliella in the subphylum remains unclear. Phylogenetic analyses using different algorithms based on the sequences of six genes, including the small subunit (18S) ribosomal DNA (rDNA), the large subunit (26S) rDNA D1/D2 domains, the internal transcribed spacer regions (ITS 1 and 2) including 5.8S rDNA, the two subunits of RNA polymerase II (RPB1 and RPB2) and the translation elongation factor 1-\xce\xb1 (EF1-\xce\xb1), were performed to address their phylogenetic positions. Our analyses indicated that Malassezia and Moniliella represented two deeply rooted lineages within Ustilaginomycotina and have a sister relationship to both Ustilaginomycetes and Exobasidiomycetes. Those clades are described here as new classes, namely Moniliellomycetes with order Moniliellales, family Moniliellaceae, and genus Moniliella; and Malasseziomycetes with order Malasseziales, family Malasseziaceae, and genus Malassezia. Phenotypic differences support this classi\xef\xac\x81cation suggesting widely different life styles among the mainly plant pathogenic Ustilaginomycotina.
    Keywords: fungi ; molecular phylogeny ; smuts ; taxonomy ; yeasts
    Repository Name: National Museum of Natural History, Netherlands
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  • 17
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 32 no. 1, pp. 25-51
    Publication Date: 2024-01-12
    Description: Based on analyses of concatenated internal transcribed spacer regions of the nrDNA operon (ITS), large subunit rDNA (LSU), \xce\xb3-actin and \xce\xb2-tubulin gene sequences the taxonomy of coniothyrium-like fungi belonging in the family Montagnulaceae, order Pleosporales, was re-assessed. Two new genera are proposed, Alloconiothyrium, to accommodate A. aptrootii sp. nov., and Dendrothyrium for D. longisporum sp. nov. and D. variisporum sp. nov. One new species is described in Paraconiothyrium, viz. Parac. archidendri sp. nov., while two species so far classified in Paraconiothyrium are transferred to Paraphaeosphaeria, viz. Paraph. minitans comb. nov. and Paraph. sporulosa comb. nov. In Paraphaeosphaeria five new species are described based on asexual morphs, viz. Paraph. arecacearum sp. nov., Paraph. neglecta sp. nov., Paraph. sardoa sp. nov., Paraph. verruculosa sp. nov., and Paraph. viridescens sp. nov. Macro- and micromorphological characteristics are fully described.
    Keywords: \xce\xb3-actin ; \xce\xb2-tubulin ; ITS ; LSU ; Microsphaeropsis ; Paraconiothyrium ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 18
    Publication Date: 2024-01-12
    Description: The Teratosphaeriaceae represents a recently established family that includes numerous saprobic, extremophilic, human opportunistic, and plant pathogenic fungi. Partial DNA sequence data of the 28S rRNA and RPB2 genes strongly support a separation of the Mycosphaerellaceae from the Teratosphaeriaceae, and also provide support for the Extremaceae and Neodevriesiaceae, two novel families including many extremophilic fungi that occur on a diversity of substrates. In addition, a multi-locus DNA sequence dataset was generated (ITS, LSU, Btub, Act, RPB2, EF-1\xce\xb1 and Cal) to distinguish taxa in Mycosphaerella and Teratosphaeria associated with leaf disease of Eucalyptus, leading to the introduction of 23 novel genera, \xef\xac\x81ve species and 48 new combinations. Species are distinguished based on a polyphasic approach, combining morphological, ecological and phylogenetic species concepts, named here as the Consolidated Species Concept (CSC). From the DNA sequence data generated, we show that each one of the \xef\xac\x81ve coding genes tested, reliably identify most of the species present in this dataset (except species of Pseudocercospora). The ITS gene serves as a primary barcode locus as it is easily generated and has the most extensive dataset available, while either Btub, EF-1\xce\xb1 or RPB2 provide a useful secondary barcode locus.
    Keywords: Eucalyptus ; multi-locus ; phylogeny ; species concepts ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 19
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 59 no. 2, pp. 144-154
    Publication Date: 2024-01-12
    Description: Three new species in the Nepenthes alata group from the Philippines, Nepenthes armin, N. tboli and N. zygon, are described and assessed as threatened using the IUCN 2012 standard. The group is expanded by the inclusion of N. truncata and N. robcantleyi, previously included in the N. regiae group. A key to the nineteen species of the group is presented.
    Keywords: Conservation ; IUCN ; mining ; Nepenthes ; Philippines ; taxonomy ; ultramafic
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  • 20
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 59 no. 1, pp. 42-48
    Publication Date: 2024-01-12
    Description: Two new species of Syzygium, S. hookeri and S. sanjappaiana from the Saddle Peak National Park of North Andaman Islands, are described and illustrated. The novelties are deliberated in the light of reviewed concept on the genus Syzygium and discussed with related species of Myanmar and Sri Lanka.
    Keywords: New species ; North Andaman Islands ; Syzygium ; taxonomy
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  • 21
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 59 no. 1, pp. 1-5
    Publication Date: 2024-01-12
    Description: A new species of Herpetospermum (Schizopeponeae, Cucurbitaceae) is described from north-eastern India, northern Myanmar and southwest China (Xizang and Yunnan). Herpetospermum operculatum was previously confused with Herpetospermum (= Biswarea) tonglense, but differs primarily in having smooth yellow-striped fruit with operculum at stylar end, ascendent seed arrangement in fruit and prominent probracts and bracts. At least a part of the collections of Herpetospermum tonglense in Myanmar and China represent misidentification of this species.
    Keywords: China ; Herpetospermum tonglense ; misidentification ; Myanmar ; north-eastern India ; taxonomy
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  • 22
    Publication Date: 2024-01-12
    Description: The present work revises the taxonomy of one group of camaenid gastropods from Timor-Leste based on the study of a large number of recently collected ethanol preserved samples as well as historic museum material, including types. By employing comparative analyses of the variation in morphological features (shell, penial anatomy) and the differentiation in mitochondrial DNA sequences of the cytochrome c oxidase subunit 1 gene (COI) and the 16S rDNA (16S), altogether nineteen species are recognized from Timor-Leste and adjacent areas in the Lesser Sunda and Moluccas, such as West-Timor, Adonara, Leti and Sermata Islands (Indonesia). Four of these species were described previously and have mostly been placed within the genus Chloritis Beck, 1837 in the few historic treatments available. Fifteen species found to be new are formally described. In contrast to the previous taxonomic treatment, placement in the genus parachloritis Ehrmann, 1912 is proposed on grounds of comparative shell morphology. Molecular phylogenetic analyses revealed that all examined species form a monophyletic group, which encompasses diverse shell forms. While most species have shells of the general chloritid type, which are of little taxonomic utility, highly distinct shell morphs (trochoid shells, dwarf forms) have originated within this radiation in independent lineages. Morphological change has occurred in some taxonomic lineages while the bulk of Parachloritis species has maintained an ancestral shell phenotype. This phenotypic stasis is attributed to stabilizing selection in species, which have maintained associations with ancestral habitats, while distinct shell forms have evolved as result of habitat shifts. Consequently, purely shellbased taxonomies are prone to errors due to misjudging the significance of shell characters. While some Parachloritis species uncovered here were found to be narrowly endemic, others had wide distributions that include more than one island. Narrow range endemism was predominantly found in dwarf species and in species that live in high altitudes.
    Keywords: Gastropoda ; Helicoidea ; new species ; phylogeny ; systematics ; taxonomy
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  • 23
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 33 no. 1, pp. 155-168
    Publication Date: 2024-01-12
    Description: Identi\xef\xac\x81cation of fungi and the International Code of Nomenclature underpinning this process, rests strongly on the characterisation of morphological structures. Yet, the value of these characters to de\xef\xac\x81ne species in many groups has become questionable or even superfluous. This has emerged as DNA-based techniques have increasingly revealed cryptic species and species complexes. This problem is vividly illustrated in the present study where 105 isolates of the Botryosphaeriales were recovered from both healthy and diseased woody tissues of native Acacia spp. in Namibia and South Africa. Thirteen phylogenetically distinct groups were identi\xef\xac\x81ed based on Internal Transcribed Spacer (ITS) rDNA PCR-RFLP and translation elongation factor 1-\xce\xb1 (TEF1-\xce\xb1) sequence data, two loci that are known to be reliable markers to distinguish species in the Botryosphaeriales. Four of these groups could be linked reliably to sequence data for formerly described species, including Botryosphaeria dothidea, Dothiorella dulcispinae, Lasiodiplodia pseudotheobromae and Spencermartinsia viticola. Nine groups, however, could not be linked to any other species known from culture and for which sequence data are available. These groups are, therefore, described as Aplosporella africana, A. papillata, Botryosphaeria auasmontanum, Dothiorella capri-amissi, Do. oblonga, Lasiodiplodia pyriformis, Spencermartinsia rosulata, Sphaeropsis variabilis and an undescribed Neofusicoccum sp. The species described here could not be reliably compared with the thousands of taxa described in these genera from other hosts and regions, where only morphological data are available. Such comparison would be possible only if all previously described taxa are epitypi\xef\xac\x81ed, which is not a viable objective for the two families, Botryosphaeriaceae and Aplosporellaceae, in the Botryosphaeriales identi\xef\xac\x81ed here. The extent of diversity of the Botryosphaeriales revealed in this and other recent studies is expected to reflect that of other undersampled regions and hosts, and illustrates the urgency to \xef\xac\x81nd more effective ways to describe species in this, and indeed other, groups of fungi.
    Keywords: Botryosphaeriales ; morphotaxa ; phylogeny ; taxonomy ; tree health
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  • 24
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 32 no. 1, pp. 127-140
    Publication Date: 2024-01-12
    Description: Species in the genus Gliocephalotrichum (= Leuconectria) (Hypocreales, Nectriaceae) are soilborne fungi, associated with post-harvest fruit spoilage of several important tropical fruit crops. Contemporary taxonomic studies of these fungi have relied on morphology and DNA sequence comparisons of the internal transcribed spacer region of the nuclear rDNA (ITS) and the \xce\xb2-tubulin gene regions. Employing DNA sequence data from four loci (\xce\xb2-tubulin, histone H3, ITS, and translation elongation factor 1-alpha) and morphological comparisons, the taxonomic status of the genus Gliocephalotrichum was re-evaluated. As a result five species are newly described, namely G. humicola (Taiwan, soil), G. mexicanum (rambutan fruit from Mexico), G. nephelii (rambutan fruit from Guatemala), G. queenslandicum (Australia, endophytic isolations) and G. simmonsii (rambutan fruit from Guatemala). Although species of Gliocephalotrichum are generally not regarded as important plant pathogens, their ability to cause postharvest fruit rot could have an impact on fruit export and storage.
    Keywords: Gliocephalotrichum ; Leuconectria ; phylogeny ; taxonomy
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  • 25
    Publication Date: 2024-01-12
    Description: Oxfordian (Upper Jurassic) siliceous sponge-microbial reef strata in the southern Polish Uplands around Krak\xc3\xb3w have recently yielded two types of sixth abdominal tergites of pylochelid paguroids. We here add a third one, Pylochelitergites exspectatus sp. nov. These small-sized, operculiform remains have a high preservation potential and thus allow us to document the geological history of two families of symmetrical hermit crabs, the Pylochelidae and Parapylochelidae, in some detail.
    Keywords: hermit crabs ; taxonomy ; new taxon ; Oxfordian
    Repository Name: National Museum of Natural History, Netherlands
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  • 26
    Publication Date: 2024-01-12
    Description: Crustacean subfossils from the Jambusan Caves in Bau (Sarawak), collected by the late A.H. Everett are assigned to two relatively large species of potamid freshwater crabs (Brachyura) that are still extant in the area, viz. Isolapotamon bauense Ng, 1987 and I. consobrinum (De Man, 1899). While I. bauense is known to occur naturally in the caves, I. consobrinum is a primarily riverine species. On the basis of the available archaeological evidence, the two species were probably collected for food by early human inhabitants of Sarawak. Characters that are useful to identify the chelae and fingers of Bornean freshwater crabs are also discussed.
    Keywords: Potamidae ; Isolapotamon ; taxonomy ; Everett Collection
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  • 27
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 59 no. 2, pp. 131-138
    Publication Date: 2024-01-12
    Description: The genus Oxalis in southern Africa contains more than 200 species, with the vast bulk of species in the Greater Cape Floristic Region (GCFR). Recent \xef\xac\x81eldwork has suggested that many await discovery. Here we investigate the identity of two apparently undescribed Oxalis species from Northern Cape, South Africa, using morphological comparisons with closely related taxa. We provide a preliminary phylogenetic placement using DNA sequence-based analyses of the Internal Transcribed Spacer (ITS) region. Both putative new species are distinguished from all known Oxalis species based on macro-morphological traits. Molecular data placed both within a clade consisting of the weedy O. pes-caprae and its close relatives. Oxalis hirsutibulba sp. nov. is characterised by densely hairy bulb tunics, a trait absent from all known members of the O. pes-caprae clade. Oxalis fenestrata sp. nov. is unique in producing apple green succulent stems and leaflets usually with translucent white markings at their incisions. We also provide the \xef\xac\x81rst phylogenetic placement of the GCFR narrow endemic O. lasiorrhiza in the O. pes-caprae clade. In conjunction with several other recent discoveries, these two new species and the phylogenetic placement of O. lasiorrhiza show that the O. pes-caprae clade is much more speciose than previously estimated.
    Keywords: New species ; Oxalidaceae ; Oxalis ; phylogeny ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 28
    Publication Date: 2024-01-12
    Description: The Cenozoic bryozoan fauna of Indonesia has been neglected in the past. In this pioneering study, based on new material collected during the two field seasons of the Throughflow project, we describe a total of 51 bryozoan species, comprising 15 cyclostomes and 36 anascan-grade cheilostomes, ranging in age from Early to Late Miocene (late Burdigalian to Messinian), collected from 17 sections located in the vicinities of Samarinda, Bontang and Sangkulirang in East Kalimantan, Indonesian Borneo. Eleven of these species are new: Microeciella nadiae sp. nov., Pseudidmonea johnsoni sp. nov., Cranosina rubeni sp. nov., Parellisina mirellae sp. nov., Vincularia berningi sp. nov., Vincularia semarai sp. nov., Vincularia tjaki sp. nov., Vincularia manchanui sp. nov., Gontarella? sendinoae sp. nov., Canda giorgioi sp. nov. and Canda federicae sp. nov. Ten species show affinities with Recent taxa from the Indo-Pacific. Bryozoans are found mainly encrusting the undersides of platy corals from low- and high-relief build-ups, and coral carpets in mixed carbonate-siliciclastic environments.
    Keywords: taxonomy ; Borneo ; Burdigalian ; Langhian ; Serravallian ; Messinian
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  • 29
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 59 no. 2, pp. 103-105
    Publication Date: 2024-01-12
    Description: Licania subg. Angelesia is composed of only three species restricted to Southeast Asia and is currently delimited as one of four subgenera of Licania, a species-rich genus of mostly Neotropical taxa. Molecular phylogenetic studies involving Chrysobalanaceae have revealed that Licania is polyphyletic. Here we propose to re-establish Licania subg. Angelesia to generic rank based on molecular and morphological evidence and the three species currently placed in Licania subg. Angelesia (Licania fusicarpa, L. palawanensis and L. splendens) are here re-instated and transferred to Angelesia, as appropriate. This new generic delimitation renders Licania an exclusively Neotropical genus, and Angelesia an endemic Southeast Asian genus.
    Keywords: Licania ; pantropical ; polyphyletic ; taxonomy
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  • 30
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 59 no. 1, pp. 33-36
    Publication Date: 2024-04-10
    Description: A new species of Gesneriaceae from south-western Guangxi, China, Petrocodon villosus, is described and illustrated. It resembles P. ferrugineus, but is differentiated by several characters, such as the size of bracts, calyx and corolla, the indumentum of leaf blades, calyx, filaments and the outside of the corolla; the corolla tube shape, limb and lobes, the disc and stigma. A description of P. villosus, together with illustrations, habitat description and a diagnostic comparison are presented.
    Keywords: Gesneriaceae ; Guangxi ; new species ; Petrocodon ; P. villosus ; taxonomy
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  • 31
    Publication Date: 2018-03-29
    Description: The Bupleurum feeding species of Trifurcula (Glaucolepis) Braun, 1917 are revised. Five species are recognised: T. bupleurella (Chrétien, 1907), T. sanctibenedicti Klimesch, 1979, T. megaphallus van Nieukerken, Z. Laštuvka & A. Laštuvka sp. n. feeding on Bupleurum gibraltarium in southern Spain, T. chretieni Z. Laštuvka, A. Laštuvka & van Nieukerken sp. n. feeding on Bupleurum rigidum in southern France, Spain and Portugal, and T. siciliae Z. Laštuvka, A. Laštuvka & van Nieukerken sp. n. feeding on B. fruticosum in Sicily. The group is restricted to southwestern Europe and northern Africa, the area where most shrubby Bupleurum species occur. A NJ and Bayesian analysis of DNA barcodes of four out of five species suggest a single origin of Bupleurum feeding in the subgenus Glaucolepis.
    Keywords: Bupleurum ; new species ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 32
    Publication Date: 2015-04-20
    Description: Mucormycosis usually presents as a progressive infection with significant angio-invasion. Mucormycosis due to Mucor irregularis (formerly Rhizomucor variabilis var. variabilis), however, is exceptional in causing chronic cutaneous infection in immunocompetent humans, ultimately leading to severe morbidity if left untreated. More than 90 % of the cases known to date were reported from Asia, mainly from China. The nearest neighbour of M. irregularis is the saprobic species M. hiemalis. The aim of this study was to evaluate the taxonomic position, epidemiology, and intra- and inter-species diversity of M. irregularis based on 21 strains (clinical n = 17) by multilocus analysis using ITS, LSU, RPB1 and RPB2 genes, compared to results of cluster analysis with amplified fragment length polymorphism (AFLP) data. By combining MLST and AFLP analyses, M. irregularis was found to be monophyletic with high bootstrap support, and consisted of five subgroups, which were not concordant in all partitions. It was thus confirmed that M. irregularis is a single species at 96.1–100 % ITS similarity and low recombination rates between populations. Some geographic structuring was noted with some localised populations, which may be explained by limited air-dispersal. The natural habitat of the species is likely to be in soil and decomposing plant material.
    Keywords: Biodiversity ; chronic cutaneous infection ; epidemiology ; Mucor hiemalis ; Mucor irregularis ; Mucormycosis ; taxonomy
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  • 33
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.58 (2013) nr.1 p.1
    Publication Date: 2015-03-06
    Description: Four new species, one with two subspecies, of the genus Campylospermum are described, all endemic or sub-endemic to Gabon. These are C. auriculatum, C. gabonensis, C. gabonensis subsp. australis, C. glaucifolium and C. occidentalis. Distribution maps and scans of the holotypes are provided as well as preliminary IUCN Red List assessments. New combinations for nine species formerly assigned to the genus Ouratea and/or Gomphia are proposed: C. andongensis, C. glomeratum, C. longestipulatum, C. lunzuensis, C. lutambensis, C. nutans, C. plicatum and C. warneckei. Finally, one taxon is raised from the variety to species level, leading to the new combination C. costatum.
    Keywords: Africa ; Campylospermum ; conservation ; Gabon ; Gomphia ; IUCN Red List ; Ochnaceae ; Ouratea ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 34
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.58 (2013) nr.1 p.8
    Publication Date: 2015-03-06
    Description: Recently, N. baramensis and N. rafflesiana var. subglandulosa were described from Borneo as new taxa closely related to N. rafflesiana. However, comparison of new collections made in Borneo with N. baramensis and N. rafflesiana var. subglandulosa indicated a synonymy. Furthermore, they were identical to N. hemsleyana, an older taxon formerly treated as synonym of N. rafflesiana. Acknowledging the taxonomic differences to N. rafflesiana, the name N. hemsleyana is reinstated following the priority rule. New evidence is presented that strengthens the interpretation to split N. rafflesiana and N. hemsleyana.
    Keywords: Borneo ; endemic ; Malesia ; Nepenthes ; pitcher plant ; reinstatement ; taxonomy
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  • 35
    Publication Date: 2020-01-28
    Keywords: Porifera Macaronesia ; sponges ; taxonomy ; Clathria ; Antho ; Artemisina ; Northwest Africa ; Macaronesia ; Saharan Upwelling ; Sahelian Upwelling
    Repository Name: National Museum of Natural History, Netherlands
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  • 36
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.58 (2013) nr.1 p.53
    Publication Date: 2015-03-06
    Description: Twenty species of Syzygium occur in Vanuatu of which eighteen are indigenous (six being endemic and one being an ancient introduction) and two are recently introduced. Three species are newly described: S. chanelii, S. flabellum and S. vanuatuense. The Syzygium flora of Vanuatu has strong links at species level to that of the Solomon Islands and Fiji, less strong links to elsewhere in the southwest Pacific and apparently no links to New Caledonia. Descriptions are provided for each species occurring in Vanuatu and identification keys are provided for flowering and vegetative material.
    Keywords: Biogeography ; ecology ; Myrtaceae ; systematics ; Syzygium ; taxonomy ; Vanuatu
    Repository Name: National Museum of Natural History, Netherlands
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  • 37
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.58 (2013) nr.1 p.77
    Publication Date: 2015-03-06
    Description: We describe and illustrate Paepalanthus aleurophyllus (Eriocaulaceae, Paepalanthoideae). The species is narrowly distributed, restricted to the Pico do Itambé in Minas Gerais, Brazil. Detailed comparisons are made with P. diplobetor and P. ciliolatus. Paepalanthus aleurophyllus is distinguished by its densely ciliated leaves with dolabriform to fusiform trichomes in the adaxial leaf surface, conspicuous venation on the abaxial leaf surface, trichomes between the scape ribs, general habit, and other floral features. We provide detailed line drawings and commentaries on distribution, ecology, and conservation.
    Keywords: Campo Rupestre ; conservation ; Paepalanthoideae ; Pico do Itambé State Park ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 38
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.30 (2013) nr.1 p.11
    Publication Date: 2015-04-20
    Description: The order Mucorales comprises predominantly fast-growing saprotrophic fungi, some of which are used for the fermentation of foodstuffs but it also includes species known to cause infections in patients with severe immune or metabolic impairments. To inventory biodiversity in Mucorales ITS barcodes of 668 strains in 203 taxa were generated covering more than two thirds of the recognised species. Using the ITS sequences, Molecular Operational Taxonomic Units were defined by a similarity threshold of 99 %. An LSU sequence was generated for each unit as well. Analysis of the LSU sequences revealed that conventional phenotypic classifications of the Mucoraceae are highly artificial. The LSU- and ITS-based trees suggest that characters, such as rhizoids and sporangiola, traditionally used in mucoralean taxonomy are plesiomorphic traits. The ITS region turned out to be an appropriate barcoding marker in Mucorales. It could be sequenced directly in 82 % of the strains and its variability was sufficient to resolve most of the morphospecies. Molecular identification turned out to be problematic only for the species complexes of Mucor circinelloides, M. flavus, M. piriformis and Zygorhynchus moelleri. As many as 12 possibly undescribed species were detected. Intraspecific variability differed widely among mucorealean species ranging from 0 % in Backusella circina to 13.3 % in Cunninghamella echinulata. A high proportion of clinical strains was included for molecular identification. Clinical isolates of Cunninghamella elegans were identified molecularly for the first time. As a result of the phylogenetic analyses several taxonomic and nomenclatural changes became necessary. The genus Backusella was emended to include all species with transitorily recurved sporangiophores. Since this matched molecular data all Mucor species possessing this character were transferred to Backusella. The genus Zygorhynchus was shown to be polyphyletic based on ITS and LSU data. Consequently, Zygorhynchus was abandoned and all species were reclassified in Mucor. Our phylogenetic analyses showed, furthermore, that all non-thermophilic Rhizomucor species belong to Mucor. Accordingly, Rhizomucor endophyticus was transferred to Mucor and Rhizomucor chlamydosporus was synonymised with Mucor indicus. Lecto-, epi- or neotypes were designated for several taxa.
    Keywords: Backusella ; biodiversity ; clinical relevance ; DNA barcoding ; intraspecific variability ; ITS ; LSU ; Mucor ; Mucorales ; nomenclature ; Rhizomucor ; taxonomy ; Zygorhynchus
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  • 39
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.58 (2013) nr.1 p.45
    Publication Date: 2015-03-06
    Description: Mapania sapuaniana, a spectacular new sedge species from Lanjak Entimau, Sarawak, is described and illustrated. It is closely related to M. richardsii and M. borneensis but differs in having broad leaves with a distinct pseudopetiole, reddish purple or maroon coloration on the underside of the leaf and petiole and an inflorescence composed of several spikes.
    Keywords: Borneo ; Cyperaceae ; Mapania ; Sarawak ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 40
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.58 (2013) nr.3 p.229
    Publication Date: 2015-03-06
    Description: A taxonomic revision is presented of the new genus Heteroblemma (Dissochaeteae – Melastomataceae), formerly a section of Medinilla which occurs in Malesia and Vietnam with 14 species, 3 new, and 11 new combinations. Descriptions, illustrations, a key, and an index to collectors are provided.
    Keywords: Heteroblemma ; Malesia ; Medinilla ; Melastomataceae ; taxonomy ; Vietnam
    Repository Name: National Museum of Natural History, Netherlands
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  • 41
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.58 (2013) nr.1 p.71
    Publication Date: 2015-03-06
    Description: Establishing species distributions is particularly challenging in large tropical genera of inconspicuous plants. One such genus is Oberonia (Orchidaceae) which we are currently revising for Thailand. When encountering material of a putatively new species, great care has been taken to make a wide geographic search for matching extra-Thai taxa. Against this background, we here record 12 species as new for Thailand: O. dissitiflora, O. evrardii, O. gracilis, O. insectifera, O. lotsyana, O. microphylla, O. orbicularis, O. semifimbriata, O. singalangensis, O. stenophylla, O. suborbicularis, O. wenzelii. Seven records are based (at least in part) on older collections, suggesting that many gaps in currently known species distributions can be filled through revision of existing collections alone. Our wide geographic search for taxonomic matches had three important implications: 1) we succeeded in identifying five species that had not previously been recognized for Thailand or neighbouring regions; 2) we realized that circumscription of three species should be widened, with implications for their known distributions; 3) comparison of numerous collections enabled us to report additionally six new records (O. evrardii for Myanmar; O. insectifera for Papua New Guinea; O. semifimbriata for Borneo; O. wenzelii for India, Myanmar and Java). Eventually, we draw attention to new online tools and resources that facilitate improvements of taxonomic and geographic knowledge in large tropical genera.
    Keywords: Flora of Thailand ; geographic range ; occurrence ; orchids ; revision ; synonymy ; taxonomy
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  • 42
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.58 (2013) nr.1 p.13
    Publication Date: 2015-03-06
    Description: A new species of Hymenostegia (Detarieae, Caesalpinioideae, Leguminosae) is described from Cameroon. Hymenostegia viridiflora has previously been confused with the type species of the genus, H. floribunda, but differs from it in having pale green to greenish yellow instead of lemon yellow petals, a broader upper part of the stipule, more numerous reddish veins on the white bracteoles and generally more numerous and narrower leaflets. As a consequence, the geographic range of true H. floribunda no longer includes Cameroon. Hymenostegia viridiflora is assessed as Vulnerable according to the criteria of IUCN.
    Keywords: Caesalpiniaceae ; conservation ; Fabaceae ; taxonomy ; threatened species ; Tropical Africa
    Repository Name: National Museum of Natural History, Netherlands
    Type: Article / Letter to the editor
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  • 43
    Publication Date: 2024-01-12
    Description: The Bupleurum feeding species of Trifurcula (Glaucolepis) Braun, 1917 are revised. Five species are recognised: T. bupleurella (Chr\xc3\xa9tien, 1907), T. sanctibenedicti Klimesch, 1979, T. megaphallus van Nieukerken, Z. La\xc5\xa1tuvka & A. La\xc5\xa1tuvka sp. n. feeding on Bupleurum gibraltarium in southern Spain, T. chretieni Z. La\xc5\xa1tuvka, A. La\xc5\xa1tuvka & van Nieukerken sp. n. feeding on Bupleurum rigidum in southern France, Spain and Portugal, and T. siciliae Z. La\xc5\xa1tuvka, A. La\xc5\xa1tuvka & van Nieukerken sp. n. feeding on B. fruticosum in Sicily. The group is restricted to southwestern Europe and northern Africa, the area where most shrubby Bupleurum species occur. A NJ and Bayesian analysis of DNA barcodes of four out of five species suggest a single origin of Bupleurum feeding in the subgenus Glaucolepis.
    Keywords: Bupleurum ; new species ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 44
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    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-11
    Description: Faculty and students in the 1992 Microbial Diversity course at the Marine Biological Laboratory in Woods Hole, MA. 2nd view in front of Alvin
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 45
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-11
    Description: Faculty and students in the 1988 Biology of Parasitism course at the Marine Biological Laboratory in Woods Hole, MA. 2nd view with autoclave bags.
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 46
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    In:  MBL Photographic Collection
    Publication Date: 2023-01-12
    Description: Faculty and students in the Fall 2001 Biomedical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 47
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    Marine Biological Laboratory
    In:  MBL Photographic Collection
    Publication Date: 2023-01-12
    Description: Faculty and students in the Spring 2004 Biomedical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 48
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1991 Marine Ecology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 49
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1988 Optical Microscopy course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 50
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1990 Microbiology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 51
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    Marine Biological Laboratory
    In:  MBL Photographic Collection
    Publication Date: 2023-01-12
    Description: Faculty and students in the Fall 2002 Biomedical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 52
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1988 Marine Ecology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 53
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    Marine Biological Laboratory
    In:  MBL Photographic Collection
    Publication Date: 2023-01-12
    Description: Faculty and students in the Spring 2003 Biomedical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 54
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    Marine Biological Laboratory
    In:  MBL Photographic Collection
    Publication Date: 2023-01-12
    Description: Faculty and students in the Spring 2001 Biomedical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 55
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    Marine Biological Laboratory
    In:  MBL Photographic Collection
    Publication Date: 2023-01-12
    Description: Faculty and students in the Spring 2002 Biomedical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 56
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    Marine Biological Laboratory
    In:  MBL Photographic Collection
    Publication Date: 2023-01-12
    Description: Faculty and students in the Spring 2006 Biomedical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 57
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1989 Marine Ecology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 58
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Key to the faculty and students in the 1988 Marine Ecology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 59
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1990 Marine Ecology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 60
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1893 Botany course at the Marine Biological Laboratory in Woods Hole, MA.
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 61
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Key to the faculty and students in the 1990 Biology of Parasitism course at the Marine Biological Laboratory in Woods Hole, MA. 2nd view with autoclave bags.
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 62
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Key to the faculty and students in the 1893 Botany course at the Marine Biological Laboratory in Woods Hole, MA.
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 63
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1946 Invertebrate Zoology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 64
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Key to the faculty and students in the 1976 Invertebrate Zoology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 65
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Key to the faculty and students in the 1994 Microbial Diversity course at the Marine Biological Laboratory in Woods Hole, MA. 2nd view in front of Alvin
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 66
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1993 Optical Microscopy course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 67
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1989 Microbiology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 68
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1990 Optical Microscopy course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 69
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1994 Microbiology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 70
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    Marine Biological Laboratory Archives
    In:  MBL Photographic Collection, Box 32
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1997 Biology of Parasitism course at the Marine Biological Laboratory in Woods Hole, MA. 2nd view lying down
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 71
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    Marine Biological Laboratory
    Publication Date: 2023-01-12
    Description: Faculty and students in the Spring 1999 Medical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
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  • 72
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    Marine Biological Laboratory
    In:  1952 Invertebrate Zoology course notebook, MBL Archives
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1952 Invertebrate Zoology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 73
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    Marine Biological Laboratory
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1993 Medical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 74
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    Marine Biological Laboratory
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1992 Medical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 75
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    Marine Biological Laboratory
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1995 Medical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
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  • 76
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    Marine Biological Laboratory
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1996 Medical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
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  • 77
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    Marine Biological Laboratory
    Publication Date: 2023-01-12
    Description: Faculty and students in the 1997 Medical Informatics course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; Special Topics Courses
    Repository Name: Woods Hole Open Access Server
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  • 78
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    Marine Biological Laboratory
    In:  1952 Invertebrate Zoology course notebook, MBL Archives
    Publication Date: 2023-01-12
    Description: Key to the faculty and students in the 1952 Invertebrate Zoology course at the Marine Biological Laboratory in Woods Hole, MA
    Description: Photographs
    Keywords: Marine Biological Laboratory (Woods Hole, Mass.) ; MBL Courses
    Repository Name: Woods Hole Open Access Server
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  • 79
    Publication Date: 2024-01-12
    Keywords: Porifera Macaronesia ; sponges ; taxonomy ; Clathria ; Antho ; Artemisina ; Northwest Africa ; Macaronesia ; Saharan Upwelling ; Sahelian Upwelling
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 80
    Publication Date: 2024-01-12
    Description: In this study we reassess the taxonomic reference of the previously described holomorphic alkaliphilic fungus Heleococcum alkalinum isolated from soda soils in Russia, Mongolia and Tanzania. We show that it is not an actual member of the genus Heleococcum (order Hypocreales) as stated before and should, therefore, be excluded from it and renamed. Multi-locus gene phylogeny analyses (based on nuclear ITS, 5.8S rDNA, 28S rDNA, 18S rDNA, RPB2 and TEF1-alpha) have displayed this fungus as a new taxon at the genus level within the family Plectosphaerellaceae, Hypocreomycetidae, Ascomycota. The reference species of actual Heleococcum members showed clear divergence from the strongly supported Heleococcum alkalinum position within the Plectosphaerellaceae, sister to the family Glomerellaceae. Eighteen strains isolated from soda lakes around the world show remarkable genetic similarity promoting speculations on their possible evolution in harsh alkaline environments. We established the pH growth optimum of this alkaliphilic fungus at c. pH 10 and tested growth on 30 carbon sources at pH 7 and 10. The new genus and species, Sodiomyces alkalinus gen. nov. comb. nov., is the second holomorphic fungus known within the family, the first one being Plectosphaerella \xe2\x80\x93 some members of this genus are known to be alkalitolerant. We propose the Plectosphaerellaceae family to be the source of alkaliphilic filamentous fungi as also the species known as Acremonium alcalophilum belongs to this group.
    Keywords: Alkaliphilic fungi ; growth ; Heleococcum alkalinum ; molecular phylogeny ; scanning electron microscopy ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 81
    Publication Date: 2024-01-12
    Description: Mucormycosis usually presents as a progressive infection with significant angio-invasion. Mucormycosis due to Mucor irregularis (formerly Rhizomucor variabilis var. variabilis), however, is exceptional in causing chronic cutaneous infection in immunocompetent humans, ultimately leading to severe morbidity if left untreated. More than 90 % of the cases known to date were reported from Asia, mainly from China. The nearest neighbour of M. irregularis is the saprobic species M. hiemalis. The aim of this study was to evaluate the taxonomic position, epidemiology, and intra- and inter-species diversity of M. irregularis based on 21 strains (clinical n = 17) by multilocus analysis using ITS, LSU, RPB1 and RPB2 genes, compared to results of cluster analysis with amplified fragment length polymorphism (AFLP) data. By combining MLST and AFLP analyses, M. irregularis was found to be monophyletic with high bootstrap support, and consisted of five subgroups, which were not concordant in all partitions. It was thus confirmed that M. irregularis is a single species at 96.1\xe2\x80\x93100 % ITS similarity and low recombination rates between populations. Some geographic structuring was noted with some localised populations, which may be explained by limited air-dispersal. The natural habitat of the species is likely to be in soil and decomposing plant material.
    Keywords: Biodiversity ; chronic cutaneous infection ; epidemiology ; Mucor hiemalis ; Mucor irregularis ; Mucormycosis ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 82
    Publication Date: 2024-01-12
    Description: The order Mucorales comprises predominantly fast-growing saprotrophic fungi, some of which are used for the fermentation of foodstuffs but it also includes species known to cause infections in patients with severe immune or metabolic impairments. To inventory biodiversity in Mucorales ITS barcodes of 668 strains in 203 taxa were generated covering more than two thirds of the recognised species. Using the ITS sequences, Molecular Operational Taxonomic Units were defined by a similarity threshold of 99 %. An LSU sequence was generated for each unit as well. Analysis of the LSU sequences revealed that conventional phenotypic classifications of the Mucoraceae are highly artificial. The LSU- and ITS-based trees suggest that characters, such as rhizoids and sporangiola, traditionally used in mucoralean taxonomy are plesiomorphic traits. The ITS region turned out to be an appropriate barcoding marker in Mucorales. It could be sequenced directly in 82 % of the strains and its variability was sufficient to resolve most of the morphospecies. Molecular identification turned out to be problematic only for the species complexes of Mucor circinelloides, M. flavus, M. piriformis and Zygorhynchus moelleri. As many as 12 possibly undescribed species were detected. Intraspecific variability differed widely among mucorealean species ranging from 0 % in Backusella circina to 13.3 % in Cunninghamella echinulata. A high proportion of clinical strains was included for molecular identification. Clinical isolates of Cunninghamella elegans were identified molecularly for the first time. As a result of the phylogenetic analyses several taxonomic and nomenclatural changes became necessary. The genus Backusella was emended to include all species with transitorily recurved sporangiophores.\nSince this matched molecular data all Mucor species possessing this character were transferred to Backusella.\nThe genus Zygorhynchus was shown to be polyphyletic based on ITS and LSU data. Consequently, Zygorhynchus was abandoned and all species were reclassified in Mucor. Our phylogenetic analyses showed, furthermore, that all non-thermophilic Rhizomucor species belong to Mucor. Accordingly, Rhizomucor endophyticus was transferred to Mucor and Rhizomucor chlamydosporus was synonymised with Mucor indicus. Lecto-, epi- or neotypes were designated for several taxa.
    Keywords: Backusella ; biodiversity ; clinical relevance ; DNA barcoding ; intraspecific variability ; ITS ; LSU ; Mucor ; Mucorales ; nomenclature ; Rhizomucor ; taxonomy ; Zygorhynchus
    Repository Name: National Museum of Natural History, Netherlands
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  • 83
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    In:  Scripta Geologica vol. 144, pp. 1-191
    Publication Date: 2024-01-12
    Description: The pyramidelloidean gastropods newly collected from one stratigraphic section and two spot localities in the Rembang anticlinorium (Middle Miocene, northeastern Java) are described and those of various ages in the collections of the Naturalis Biodiversity Center in Leiden are reviewed. A total of 111 species are covered in this paper; another 22 taxa dealt with by previous authors, of which the material was not available, are briefly commented on in an appendix. The \xe2\x80\x9cRembangian\xe2\x80\x9d (Middle Miocene) assemblage consists of 89 species. Four are identified as formerly described species, namely Leucotina speciosa (Adams), Megastomia regina (Thiele), Exesilla dextra (Saurin) and Exesilla splendida (Martin); 52 are proposed as new; most of the others almost certainly represent previously undescribed species, but cannot be named because of inadequate material. Parodostomia jogjacartensis (Martin), Parodostomia vandijki (Martin) and Pyramidella nanggulanica Finlay, described from the Eocene deposits of Java, seem to be restricted to that epoch. The Neogene fauna appears to be composed almost entirely of extinct species. Only Leucotina speciosa (Adams), Megastomia regina (Thiele), Longchaeus turritus (Adams), Pyramidella balteata (Adams), Exesilla dextra (Saurin) and Nisiturris alma (Thiele) are still present in modern Indo-West Pacific faunas. Most Neogene species seem to be endemic of the Indonesian Archipelago; relationships with other West Pacific fossil faunas have been noted for only a few taxa. The relevance of shell characters in generic recognition, namely the protoconch type, the course and/or the inner lirations of the outer lip, and the sculpture (when present), are significant characters. None of them is genus-diagnostic in itself, but their combination distinguishes the various genera. On this basis, genera are revised and include only those species sharing the relevant characters of their respective type species. The new genera Bulimoscilla, Nisipyrgiscus, Turbolidium and Bulicingulina are introduced.
    Keywords: Gastropoda ; Pyramidelloidea ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 84
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    In:  Vita Malacologica vol. 10, pp. 1-108
    Publication Date: 2024-01-12
    Description: Sixty one Pectinoidea species (11 Propeamussiidae and 50 Pectinidae) collected by the 2004 Panglao Marine Biodiversity Project (PMBP) to Panglao, Philippines, and the PANGLAO 2005 Deep-Sea Cruise are described. One Propeamussiidae species is new to science: Parvamussium largoi spec. nov. Three pectinoidean species (1 Propeamus-siidae, 2 Pectinidae) are new records for the Philippines: Similipecten eous (Melvill in Melvill & Standen, 1907), "Mimachlamys" kauaiensis (Dall, Bartsch & Rehder, 1938) and Haumea rehderi (Grau, 1960). Records of species in the ZMA collection (now Naturalis Biodiversity Center) from the Philippines, not sampled by PMBP 2004 and PANGLAO 2005, are given. Amussium electrum Pelseneer, 1911 is newly synonymised with Propeamussium caducum (E.A. Smith, 1885). Type data, references, descriptions, horizontal and vertical distribution and habitat of each species are provided.
    Keywords: Bivalvia ; Pectinoidea ; Propeamussiidae ; Pactinidae ; Panglao ; Philippines ; recent ; taxonomy ; nomenclature ; new species ; distribution
    Repository Name: National Museum of Natural History, Netherlands
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  • 85
    Publication Date: 2024-01-12
    Description: The Artematopodidae is a species-poor beetle family with contentious relationships to byrrhoid and elateroid families. Recent molecular phylogenetic analyses brought ambiguous results based on a single sequenced species. We investigated the taxonomic placement of Artematopodidae within Elateriformia using ribosomal (18S, 28S) and mitochondrial (rrnL, cox1) molecular markers and three artematopodid species. Our analyses placed Artematopodidae close to Omethidae+Telegeusidae in a basal position of broadly defined Elateroidea. Additionally, we described the first artematopodid species from China \xe2\x80\x93 Eurypogon jaechi sp. nov. and E. heishuiensis sp. nov. These species are reported from mountains of Yunnan and can be easily distinguished from their Palaearctic congeners by their large bodies and metallic green elytra. They differ from each other by the shape of the pronotum, puncturation of the head and pronotum, the relative lengths of the antennomeres 3-5, and the morphology of the female genitalia. With respect to our findings, we discussed the phylogeny, diversity and distribution of the family Artematopodidae.
    Keywords: mtDNA ; rDNA ; diversity ; Elateriformia ; new species ; Palaearctic Region ; phylogeny ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 86
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 1, pp. 77-79
    Publication Date: 2024-04-10
    Description: We describe and illustrate Paepalanthus aleurophyllus (Eriocaulaceae, Paepalanthoideae). The species is narrowly distributed, restricted to the Pico do Itambé in Minas Gerais, Brazil. Detailed comparisons are made with P. diplobetor and P. ciliolatus. Paepalanthus aleurophyllus is distinguished by its densely ciliated leaves with dolabriform to fusiform trichomes in the adaxial leaf surface, conspicuous venation on the abaxial leaf surface, trichomes between the scape ribs, general habit, and other floral features. We provide detailed line drawings and commentaries on distribution, ecology, and conservation.
    Keywords: Campo Rupestre ; conservation ; Paepalanthoideae ; Pico do Itambé State Park ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 87
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 1, pp. 45-48
    Publication Date: 2024-04-10
    Description: Mapania sapuaniana, a spectacular new sedge species from Lanjak Entimau, Sarawak, is described and illustrated. It is closely related to M. richardsii and M. borneensis but differs in having broad leaves with a distinct pseudopetiole, reddish purple or maroon coloration on the underside of the leaf and petiole and an inflorescence composed of several spikes.
    Keywords: Borneo ; Cyperaceae ; Mapania ; Sarawak ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 88
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 1, pp. 8-12
    Publication Date: 2024-04-10
    Description: Recently, N. baramensis and N. rafflesiana var. subglandulosa were described from Borneo as new taxa closely related to N. rafflesiana. However, comparison of new collections made in Borneo with N. baramensis and N. rafflesiana var. subglandulosa indicated a synonymy. Furthermore, they were identical to N. hemsleyana, an older taxon formerly treated as synonym of N. rafflesiana. Acknowledging the taxonomic differences to N. rafflesiana, the name N. hemsleyana is reinstated following the priority rule. New evidence is presented that strengthens the interpretation to split N. rafflesiana and N. hemsleyana.
    Keywords: Borneo ; endemic ; Malesia ; Nepenthes ; pitcher plant ; reinstatement ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 89
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 1, pp. 71-76
    Publication Date: 2024-04-10
    Description: Establishing species distributions is particularly challenging in large tropical genera of inconspicuous plants. One such genus is Oberonia (Orchidaceae) which we are currently revising for Thailand. When encountering material of a putatively new species, great care has been taken to make a wide geographic search for matching extra-Thai taxa. Against this background, we here record 12 species as new for Thailand: O. dissitiflora, O. evrardii, O. gracilis, O. insectifera, O. lotsyana, O. microphylla, O. orbicularis, O. semifimbriata, O. singalangensis, O. stenophylla, O. suborbicularis, O. wenzelii. Seven records are based (at least in part) on older collections, suggesting that many gaps in currently known species distributions can be filled through revision of existing collections alone. Our wide geographic search for taxonomic matches had three important implications: 1) we succeeded in identifying five species that had not previously been recognized for Thailand or neighbouring regions; 2) we realized that circumscription of three species should be widened, with implications for their known distributions; 3) comparison of numerous collections enabled us to report additionally six new records (O. evrardii for Myanmar; O. insectifera for Papua New Guinea; O. semifimbriata for Borneo; O. wenzelii for India, Myanmar and Java). Eventually, we draw attention to new online tools and resources that facilitate improvements of taxonomic and geographic knowledge in large tropical genera.
    Keywords: Flora of Thailand ; geographic range ; occurrence ; orchids ; revision ; synonymy ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 90
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 1, pp. 13-17
    Publication Date: 2024-04-10
    Description: A new species of Hymenostegia (Detarieae, Caesalpinioideae, Leguminosae) is described from Cameroon. Hymenostegia viridiflora has previously been confused with the type species of the genus, H. floribunda, but differs from it in having pale green to greenish yellow instead of lemon yellow petals, a broader upper part of the stipule, more numerous reddish veins on the white bracteoles and generally more numerous and narrower leaflets. As a consequence, the geographic range of true H. floribunda no longer includes Cameroon. Hymenostegia viridiflora is assessed as Vulnerable according to the criteria of IUCN.
    Keywords: Caesalpiniaceae ; conservation ; Fabaceae ; taxonomy ; threatened species ; Tropical Africa
    Repository Name: National Museum of Natural History, Netherlands
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  • 91
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 3, pp. 229-240
    Publication Date: 2024-04-10
    Description: A taxonomic revision is presented of the new genus Heteroblemma (Dissochaeteae – Melastomataceae), formerly a section of Medinilla which occurs in Malesia and Vietnam with 14 species, 3 new, and 11 new combinations. Descriptions, illustrations, a key, and an index to collectors are provided.
    Keywords: Heteroblemma ; Malesia ; Medinilla ; Melastomataceae ; taxonomy ; Vietnam
    Repository Name: National Museum of Natural History, Netherlands
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  • 92
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 1, pp. 28-32
    Publication Date: 2024-04-10
    Description: A clambering bamboo endemic to Braian mountain, southern Vietnam represents a new monotypic endemic genus, Cochinchinochloa H.N.Nguyen & V.T.Tran (Gramineae: Bambusoideae-Bambusinae), which is described and illustrated. Its culm nodes and the nodes of leafy branches exhibit a thick swollen patella, and in the reproductive state this taxon bears pseudospikelets having two perfect florets, with an elongated rachilla internode between the perfect florets, a rachilla extension bearing an imperfect floret at maturity, a narrowly 2-keeled palea with a distinct abaxial groove, three lodicules, six stamens, free filaments, a glabrous ovary with a long style and three stigmas, and an oblong caryopsis with a relatively thin pericarp.
    Keywords: Bambusinae ; Bambusoideae ; Cochinchinochloa ; C. braiana ; new genus ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 93
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 1, pp. 53-67
    Publication Date: 2024-04-10
    Description: Twenty species of Syzygium occur in Vanuatu of which eighteen are indigenous (six being endemic and one being an ancient introduction) and two are recently introduced. Three species are newly described: S. chanelii, S. flabellum and S. vanuatuense. The Syzygium flora of Vanuatu has strong links at species level to that of the Solomon Islands and Fiji, less strong links to elsewhere in the southwest Pacific and apparently no links to New Caledonia. Descriptions are provided for each species occurring in Vanuatu and identification keys are provided for flowering and vegetative material.
    Keywords: Biogeography ; ecology ; Myrtaceae ; systematics ; Syzygium ; taxonomy ; Vanuatu
    Repository Name: National Museum of Natural History, Netherlands
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  • 94
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 58 no. 1, pp. 1-7
    Publication Date: 2024-04-10
    Description: Four new species, one with two subspecies, of the genus Campylospermum are described, all endemic or sub-endemic to Gabon. These are C. auriculatum, C. gabonensis, C. gabonensis subsp. australis, C. glaucifolium and C. occidentalis. Distribution maps and scans of the holotypes are provided as well as preliminary IUCN Red List assessments. New combinations for nine species formerly assigned to the genus Ouratea and/or Gomphia are proposed: C. andongensis, C. glomeratum, C. longestipulatum, C. lunzuensis, C. lutambensis, C. nutans, C. plicatum and C. warneckei. Finally, one taxon is raised from the variety to species level, leading to the new combination C. costatum.
    Keywords: Africa ; Campylospermum ; conservation ; Gabon ; Gomphia ; IUCN Red List ; Ochnaceae ; Ouratea ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 95
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.29 (2012) nr.1 p.78
    Publication Date: 2015-04-20
    Description: Species classified in Penicillium sect. Chrysogena are primary soil-borne and the most well-known members are P. chrysogenum and P. nalgiovense. Penicillium chrysogenum has received much attention because of its role in the production on penicillin and as a contaminant of indoor environments and various food and feedstuffs. Another biotechnologically important species is P. nalgiovense, which is used as a fungal starter culture for the production of fermented meat products. Previous taxonomic studies often had conflicting species circumscriptions. Here, we present a multigene analysis, combined with phenotypic characters and extrolite data, demonstrating that sect. Chrysogena consists of 18 species. Six of these are newly described here (P. allii-sativi, P. desertorum, P. goetzii, P. halotolerans, P. tardochrysogenum, P. vanluykii) and P. lanoscoeruleum was found to be an older name for P. aethiopicum. Each species produces a unique extrolite profile. The species share phenotypic characters, such as good growth on CYA supplemented with 5 % NaCl, ter- or quarterverticillate branched conidiophores and short, ampulliform phialides (〈 9 μm). Conidial colours, production of ascomata and ascospores, shape and ornamentation of conidia and growth rates on other agar media are valuable for species identification. Eight species (P. allii-sativi, P. chrysogenum, P. dipodomyis, P. flavigenum, P. nalgiovense, P. rubens, P. tardochrysogenum and P. vanluykii) produce penicillin in culture.
    Keywords: Fleming ; P. chrysogenum ; P. rubens ; phylogeny ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 96
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    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi (0031-05850) vol.28 (2012) nr.1 p.76
    Publication Date: 2015-04-20
    Description: Three new species of Phyllosticta, P. hostae on Hosta plantaginea (China), P. schimae on Schima superba (China), and P. ilicis-aquifolii on Ilex aquifolium (UK), are described and illustrated in this study. They are compared with morphologically similar and phylogenetically closely related species. A polyphasic approach using phylogeny, host association, disease symptoms, colony and morphological characteristics, is employed to justify the introduction of the new taxa. Phylogenetic relationships of the new species with other Phyllosticta species are revealed by DNA sequence analyses based on the nrDNA-internal transcribed spacer (ITS) regions and a combined multilocus alignment of the ITS, partial translation elongation factor 1-alpha (TEF1), actin (ACT), and glyceraldehyde 3-phosphate dehydrogenase (GPDH) gene regions.
    Keywords: Molecular ; morphology ; phylogeny ; systematics ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: Article / Letter to the editor
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  • 97
    Publication Date: 2015-04-20
    Description: Zasmidium angulare, a novel species of Mycosphaerellaceae, and several novel taxa that reside in Dissoconiaceae, were identified from a collection of apples and Cucurbita maxima (cv. Blue Hubbard) from China and the USA that exhibited sooty blotch and flyspeck (SBFS) signs on their host substrata. Morphology on fruit surfaces and in culture, and phylogenetic analyses of the nuclear ribosomal DNAs 28S and internal transcribed spacer regions, as well as partial translation elongation factor 1-alpha gene sequences in some cases, were used to delineate seven previously unidentified species and three known species. Pseudoveronaea was established as a new genus of Dissoconiaceae, represented by two species, P. ellipsoidea and P. obclavata. Although Pseudoveronaea was morphologically similar to Veronaea, these fungi clustered with Dissoconiaceae (Capnodiales) rather than Chaetothyriales (Herpotrichiellaceae). Ramichloridium mali comb. nov., and three novel species, R. cucurbitae, R. luteum and R. punctatum were closely related with R. apiculatum, which together formed a distinct subclade in Dissoconiaceae. Species of Dissoconium s.lat. clustered in two well-supported clades supported by distinct morphological and cultural features. Subsequently Uwebraunia, a former synonym of Dissoconium, was resurrected for the one clade, with new combinations proposed for U. australiensis, U. commune, U. dekkeri and U. musae. Furthermore, we also reported that D. aciculare, Dissoconium sp., U. commune and U. dekkeri were associated with SBFS on apples.
    Keywords: Hyphomycetes ; Malus ; microfungi ; SBFS ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 98
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.57 (2012) nr.3 p.275
    Publication Date: 2015-03-06
    Description: Sixteen climbing Piper species are accepted for New Guinea. The three endemics, P. arfakianum, P. subcanirameum and P. versteegii, are fully described. Eight taxa of unclear circumscription are noted. A new variety of P. macropiper, endemic to Morobe Province of Papua New Guinea, is described. The presence of an ant-plant piper in West New Guinea is noted.
    Keywords: New Guinea ; Piper ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 99
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.57 (2012) nr.2 p.190
    Publication Date: 2015-03-06
    Description: A new species, Asplenium riswanii (sect. Thamnopteris), is described from Central Java and West Papua, Indonesia. It is distinct from any known species by having thick and rigid fronds, abaxially keeled midribs, broadly lanceolate scales, and distantly spaced sori. Morphologically, A. riswanii is not similar to any species from Malesia but somewhat close to A. antrophyoides from mainland Southeast Asia. Molecular data reveal it has an isolated position in the phylogeny. The micromorphology of spores and leaf epidermis of A. riswanii is also documented and a key to the species of Asplenium sect. Thamnopteris from Malesia is given.
    Keywords: Bird-nest fern ; Malesia ; morphology ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 100
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    In:  Blumea - Biodiversity, Evolution and Biogeography of Plants (0006-5196) vol.57 (2012) nr.2 p.109
    Publication Date: 2015-03-06
    Description: Two new species of the genus Lessingianthus (Vernonieae, Asteraceae) from Brazil and Paraguay are described and illustrated. Lessingianthus cipoensis is characterized by the presence of solitary heads disposed in short branches and ovate to elliptical leaves. It has a certain resemblance to L. vestitus, which has more branched inflorescences, with long branches, and lanceolate to obovate-lanceolate leaves. Lessingianthus paraguariensis is closely related to L. asteriflorus and L. mollissimus, but it can be distinguished by the broadly elliptical leaves and the large size of the outer phyllaries.
    Keywords: Compositae ; new species ; South America ; taxonomy ; Vernonia
    Repository Name: National Museum of Natural History, Netherlands
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