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  • General Chemistry  (153)
  • pseudorotaxanes  (8)
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Structural chemistry 10 (1999), S. 243-259 
    ISSN: 1572-9001
    Keywords: Noncovalent interactions ; pseudorotaxanes ; self-assembly ; solid-state structures ; supramolecular chemistry
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract An approach to the supramolecular syntheses of discrete multicomponent aggregates of noncovalently bound molecules, i.e., supermolecules, is described. This approach involved the careful analysis of X-ray crystal structures so as to permit a gradual increase in superstructural complexity. Many elaborate supermolecules were synthesized noncovalently from dialkylammonium-containing cations and crown ethers, following the initial observation that the dibenzylammonium ion threads through dibenzo[24]crown-8 to generate a singly stranded, singly encircled [2]pseudorotaxane, principally as a result of $$[{\text{N}}^{\text{ + }} - {\text{H}} \cdot \cdot \cdot {\text{O}}]$$ and $$[{\text{C}} - {\text{H}} \cdot \cdot \cdot {\text{O}}]$$ hydrogen bond formation. The scope of the fundamental recognition motif obtained from this initial observation was then broadened, through the use of thread-like ions with multiple dialkylammonium centers and/or larger crown ethers, so that multiply stranded and/or multiply encircled pseudorotaxanes could be prepared. Cations bearing both dialkylammonium and crown ether recognition sites were also used for the nocovalent synthesis of a discrete daisy chain supermacrocycle and the basic recognition motif was combined with other motifs for the production of a wide range of novel superarchitectures. As a greater understanding of the noncovalent interactions governing the self-assembly of the complex superarchitectures was acquired, new protocols for the noncovalent syntheses of doubly docked pseudorotaxanes and interwoven supramolecular bundles, including a supramolecular analogue of the photosynthetic special pair, were developed. The discovery that anions can play a prominent role in the solid-state self-assembly of some of the supermolecules was a valuable spinoff of the research.
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  • 2
    ISSN: 0947-6539
    Keywords: catenanes ; cyclodextrins ; macrocycles ; orientational isomerism ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A novel synthetic approach is described for the construction of catenanes in aqueous solution from a partially methylated cyclodextrin (CD)-namely, heptakis(2,6-di-O-methyl-β-cyclodextrin) (DM-β-CD)-and a range of substrate molecules that contain a hydrophobic central core in the form of a 4,4′-disubstituted biphenyl unit (usually bitolyl) carrying two hydrophilic polyether side chains terminated by primary amine functions. In water, the amphiphilic catenane precursors form 1:1 complexes with β-CD and DM-β-CD and 2:1 (guest: host) complexes with the larger γ-CD. Macrocyclizations of the biphenyl-containing substrates with aromatic diacid chlorides in aqueous solution and in the presence of DM-β-CD under Schotten-Baumann conditions afforded-in low yields-a range of [2]- and [3]catenanes. When a consitutionally asymmetrical diamine was employed as the substrate, orientational isomers of a [2]catenane were obtained. A [3]catenene incorporating a macrocyclic tetralactam was found to exist as a mixture of head-to-head and head-to-tail isomers, which could be separated by high pressure liquid chromatography and identified unambiguously by nuclear magnetic resonance spectroscopy. One of the [2]catenanes afforded good single crystals from which the solid state structure was determined by X-ray crystallography. Other techniques which aided the characterization of these novel compounds included ultraviolet/visible and luminescence spectroscopy, dynamic nuclear magnetic resonance spectroscopy and fast atom bombardment mass spectrometry. Generally speaking, the catenated cyclodextrins are soluble in halogenated and aromatic hydrocarbons as well as in hydroxylic solvents. The existence of these new compounds gives us a unique insight into the nature of the noncovalent bonding interactions that cyclodextrins employ in binding substrate molecules.
    Additional Material: 29 Ill.
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  • 3
    ISSN: 0947-6539
    Keywords: crown ethers ; dialkylammonium salts ; hydrogen bonding ; molecular recognition ; pseudorotaxanes ; self-assembly ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A very simple self-assembling system, which produces inclusion complexes with pseudorotaxane geometries, is described. The self-assembly of eight pseudorotaxanes with a range of stoichiometries-1:1, 1:2, 2:1, and 2:2 (host:guest)-has been achieved. These pseudorotaxanes self-assemble from readily available components-well-known crown ethers, such as dibenzo[24]crown-8 and bis-p-phenylene[34]crown-10, and secondary dialkylammonium hexafluorophosphate salts, such as (PhCH2)2NH+2PF-6 and (nBu)2NH+2PF-6-and have been characterized not only in the solid state, but also in solution and in the “gas phase”. The pseudorotaxanes are stabilized largely by hydrogen-bonding interactions and, in some instances, by aryl-aryl interactions.
    Additional Material: 40 Ill.
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  • 4
    ISSN: 0947-6539
    Keywords: carbohydrates ; cluster glycosides ; convergent synthesis ; dendrimers ; divergent synthesis ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Dendrimers coated with carbohydrates on their exterior surfaces have been constructed by using both convergent and divergent synthetic routes. Alternatively, cluster glycosides in the form of highly branched oligosaccharides can serve as dendritic wedges in the subsequent elaboration of fully carbohydrate dendrimers. It is anticipated that these novel saccharide-containing polymers, which are highly branched and water-soluble, will find applications of a biological nature as well as in the context of new materials.
    Additional Material: 3 Ill.
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  • 5
    ISSN: 0947-6539
    Keywords: cyclic voltammetry ; logic gates ; molecular devices ; pseudorotaxanes ; spectroelectrochemistry ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The electrochemical and spectroscopic properties of a pseudorotaxane formed in acetonitrile solution by self-assembly of a wire-type electron donor based on the tetrathiafulvalene unit and the cyclobis(paraquat-p-phenylene) tetracationic electron acceptor have been investigated. We show that a) reversible dethreading/rethreading cycles of the pseudorotaxane can be performed by either oxidation and successive reduction of the electron-donor wire or reduction and successive oxidation of the electron-accepting tetracationic cyclophane, and b) because of this special behavior, the input (electrochemical)/output (absorption spectrum) characteristics of this molecular-level system correspond to those of an XNOR logic gate.
    Additional Material: 2 Ill.
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  • 6
    ISSN: 0947-6539
    Keywords: catenanes ; molecular recognition ; pseudorotaxanes ; supramolecular chemistry ; translational isomerism ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: As a result of cooperative noncovalent bonding interactions (namely, π-π stacking, [CH…O] hydrogen bonding, and [CH…π] interactions) supramolecular complexes and mechanically interlocked molecular compounds - in particular pseudorotaxanes (precatenanes) and catenanes - self-assemble spontaneously from appropriate complementary components under thermodynamic and kinetic control, respectively. The stereoelectronic information imprinted in the components is crucial in controlling the extent of the formation of the complexes and compounds in the first place; moreover, it has a very significant influence on the relative orientations and motions of the components. In other words, the noncovalent bonding interactions - that is, the driving forces responsible for the self-assembly processes - live on inside the final superstructures and structures, governing both their thermodynamic and kinetic behavior in solution. In an unsymmetrical [2]catenane, for example, changing the constitutions of the aromatic rings or altering the nature of substituents attached to them can drive an equilibrium associated with translational isomerism in the direction of one of two or more possible isomers both in solution and in the solid state. Generally speaking, the slower the components in mechanically interlocked compounds like catenanes and rotaxanes move with respect to each other, the easier it is for them to self-assemble.
    Additional Material: 9 Ill.
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  • 7
    ISSN: 0947-6539
    Keywords: carbohydrates ; cyclodextrin analogues ; cyclooligomerizations ; glycosylations ; nanotubes ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An efficient polycondensation-cyclization approach to the synthesis of cyclodextrin analogues is demonstrated by the preparation of cyclohexaoside 1 and cyclooctaoside 2. The key intermediate, disaccharide 3, bearing the cyanoethylidene group as a glycosyl donor function and the trityloxy group as a glycosyl acceptor function was prepared in 15 steps starting from L-rhamnose and D-mannose. The crucial cyclooligomerization of the disaccharide monomer 3 was carried out in the presence of TrClO4 as a promoter with the use of ultra-dry conditions at normal concentrations. This reaction led to formation of the cyclic oligosaccharides 28 and 29 (in 34 and 31% yield, respectively), which were deprotected to afford 1 and 2, respectively. The X-ray crystal structural analysis of the cyclooctaoside 2 reveals a cylindrical shape for the cyclic oligosaccharide with C4 symmetry. Individual molecules of 2 are arranged perfectly in stacks that form nanotubes in the solid state.
    Additional Material: 14 Ill.
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  • 8
    ISSN: 0947-6539
    Keywords: interlocking moleucles ; molecular recognition ; pseudorotaxanes ; rotaxanes ; template syntheses ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The self-assembly of three new rotaxanes - two [2]rotaxanes and a [3]rotaxane - formed by a “threading followed by stoppering” approach is described. These template-directed syntheses rely on the formation of pseudorotaxane intermediates, which self-assemble in solution from functionalized secondary dialkylammonium hexafluorophosphate threads and macrocyclic polyether rings (either dibenzo-[24]crown-8 or its asymmetric constitutional isomer). The stoppers - substituted 1,2,3-triazoles-were created by thermally allowed 1,3-dipolar cycloadditions between azido groups, which terminate the threads, and di-tert-butyl acetylenedicarboxylate.
    Additional Material: 3 Ill.
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  • 9
    ISSN: 0947-6539
    Keywords: luminescence ; photochemistry ; redox chemistry ; self-assembly ; self-complexation ; template syntheses ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Photochemical control of a self-assembled supramolecular 1:1 pseudorotaxane (formed between a tetracationic cyclophane, namely the tetrachloride salt of cyclobis(paraquat-p-phenylene), and 1,5-bis[2-(2-(2-hydroxy)ethoxy)ethoxy]naphthalene) has been achieved in aqueous solution. The photochemical one-electron reduction of the cyclophane to the radical trication weakens the noncovalent bonding interactions between the cyclophane and the naphthalene guest - π-π interactions between the π-electron-rich and π-electron-poor aromatic systems, and hydrogen-bonding interactions between the acidic α-bipyridinium hydrogen atoms of the cyclophane and the polyether oxygen atoms of the naphthalene derivative - sufficiently to allow the guest to dethread from the cavity; the process can be monitored by the appearance of naphthalene fluorescence. The radical tricationic cyclophane can be oxidized back to the tetracation in the dark by allowing oxygen gas into the system. This reversible process is marked by the disappearance of naphthalene fluorescence as the molecule is recomplexed by the tetracationic cyclophane. This supramolecular system can be chemically modified such that the π-electron-rich unit, either a naphthalene derivative or a hydroquinone ring, and the tetracationic cyclophane are covalently linked. We have demonstrated that the π-electron-rich residue in this system is totally “self-complexed” by the cyclophane to which it is covalently attached. Additionally, the self-complexation can be switched “off” and “on” by electrochemical two-electron reductions and oxidations, respectively, of the tetracationic cyclophane component. Thus, we have achieved the construction of two switches at the nanoscale level, one driven by photons and the other by electrons.
    Additional Material: 15 Ill.
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  • 10
    ISSN: 0947-6539
    Keywords: catenanes ; dynamics ; isomerization ; NMR spectroscopy ; self-assembly ; Chemistry ; General Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The self-assembly of three [3]-catenanes based on a single tetracationic cyclophane - cyclobis(bipyridinium-1,4-di-ethoxybenzene) - with pairs of identical interlocked crown ethers - bis-p-phenyl-ene[34]crown-10, bis-1,5-dioxynaphthal-ene[38]crown-10, or tetrafluoro-p-phenyl-ene-p-phenylene[34]crown-10 - has been achieved in yields of 34, 31, and 33%, respectively. The solid-state structures of these [3]catenanes, determined by X-ray crystallography, are consistent with molecules having approximately C2h symmetry. In the solution state, the π-electron rich aromatic ring systems of the crown ether components, residing within the cavity of the tetracationic cyclophane, can adopt two different relative orientations, thus giving rise to two distinct isomeric forms possessing either C2h or D2 symmetries. Two dynamic processes have been characterized in the [3]catenane incorporating bis-1,5-dioxynaphthalene[38]-crown-10 macrocycles, by means of variable-temperature 1H NMR spectroscopy and subsequent lineshape analyses. The slower process is the exchange between C2h and D2 isomers, and the faster process is the rotation of the bipyridinium units of the cyclophane around their N=N axes. The evaluation of the free energies of activation at 298 K, which are, for the slower process, ca. 16 kcal mol-1, and for the faster one, ca. 14.5 kcal mol-1, has enabled us to propose a scenario in which the two included 1,5-dioxynaphthalene ring systems move continuously about the center of the cavity of the tetracationic cyclophane. A partial dissociation of one 1,5-dioxynaphthalene ring system allows the adjacent bipyridinium units to rotate about their long axes, whereas a complete dissociation is presumably necessary to allow a 1,5-dioxynaphthalene ring system to rotate about its O=O axis. The isomerism between the C2h and the D2 isomers of the [3]catenane incorporating the two bis-1,5-dioxynaphthalene[38]crown-10 rings is dependent upon 1) translational motions between the two crown ether rings and the central tetracationic cyclophane and 2) conformational changes within at least one of the two crown ether rings.
    Additional Material: 12 Ill.
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