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  • 1
    Publication Date: 2016-07-11
    Description: Methane emissions from freshwater environments contribute substantially to global warming but are under strong control of aerobic methane-oxidizing bacteria. Recently discovered methane seeps (pockmarks) in freshwater lake sediments have the potential to bypass this control by their strong outgassing activity. Whether this is counteracted by pelagic methanotrophs is not well understood yet. We used a 3H-CH4-radiotracer technique and pmoA-based molecular approaches to assess the activity, abundance and community structure of pelagic methanotrophs above active pockmarks in deep oligotrophic Lake Constance. Above profundal pockmarks, methane oxidation rates (up to 458 nmol CH4 l−1 d−1) exceeded those of the surrounding water column by two orders of magnitude and coincided with maximum methanotroph abundances of 0.6% of the microbial community. Phylogenetic analysis indicated a dominance of members of the Methylococcaceae in the water column of both, pockmark and reference sites, with most of the retrieved sequences being associated with a water-column specific clade. Communities at pockmark and reference locations also differed in parts, which was likely caused by entrainment of sediment-hosted methanotrophs at pockmark sites. Our results show that the release of seep-derived methane to the atmosphere is counteracted by a distinct methanotrophic community with a pronounced activity throughout bottom waters.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 2
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    EMBS
    In:  EPIC3European Marine Biology Symposium, Helgoland, 2015-09-21-2015-09-25Helgoland, EMBS
    Publication Date: 2015-09-23
    Description: Rivers represent a transition zone between terrestric and aquatic environments, as well as a transition zone between methane rich and methane poor environments. Methane concentrations in freshwater systems are in general higher than in marine systems. The Elbe River is one of the important rivers draining into the North Sea and with the Elbe river high amounts of methane are imported into the water column of the North Sea. The major biological sink is the oxidation of methane by aerobic methanotrophic bacteria. Eight cruises from November 2013 until November 2014 were conducted from Hamburg towards Helgoland. Methane oxidation rate was measured with radiotracers and methanotrophic abundance was assessed by q-PCR. Community fingerprinting was performed with monooxygenase intergenic spacer analysis (MISA). Combining all the data we could identify four environments (marine, coast, outer and inner estuary) with significantly different abundances. The marine environment had lowest abundances and highest abundances were found in the inner estuary. Comparison of the corresponding communities is in progress.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Conference , notRev
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  • 3
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    WILEY-BLACKWELL PUBLISHING
    In:  EPIC3FEMS Microbiology Ecology, WILEY-BLACKWELL PUBLISHING, ISSN: 0168-6496
    Publication Date: 2016-06-02
    Description: Large amounts of organic carbon are stored in Arctic permafrost environments, and microbial activity can potentially mineralize this carbon into methane, a potent greenhouse gas. In this study, we assessed the methane budget, the bacterial methane oxidation (MOX) and the underlying environmental controls of arctic lake systems, which represent substantial sources of methane. Five lake systems located on Samoylov Island (Lena Delta, Siberia) and the connected river sites were analyzed using radiotracers to estimate the MOX rates, and molecular biology methods to characterize the abundance and the community composition of methane-oxidizing bacteria (MOB). In contrast to the river, the lake systems had high variation in the methane concentrations, the abundance and composition of the MOB communities, and consequently, the MOX rates. The highest methane concentrations and the highest MOX rates were detected in the lake outlets and in a lake complex in a floodplain area. Though, in all aquatic systems we detected both, Type I and II MOB, in lake systems we observed a higher diversity including MOB, typical of the soil environments. The inoculation of soil MOB into the aquatic systems, resulting from permafrost thawing, might be an additional factor controlling the MOB community composition and potentially methanotrophic capacity.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
    Format: application/pdf
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