ALBERT

Notizen: Between 1939 and 1999 the North Anatolian fault (NAF) experienced a westward progression of eight large earthquakes over 800 km of its morphological trace. The 2000-km-long North Anatolian transform fault has also grown by westward propagation through continental lithosphere over a much longer timescale (∼10 Myr). The Sea of Marmara is a large pull-apart that appears to have been a geometrical/mechanical obstacle encountered by the NAF during its propagation. The present paper focuses on new high-resolution data on the submarine fault system that forms a smaller pull-apart beneath the Northern Sea of Marmara, between two well-known strike-slip faults on land (Izmit and Ganos faults). The outstandingly clear submarine morphology reveals a segmented fault system including pull-apart features at a range of scales, which indicate a dominant transtensional tectonic regime. There is no evidence for a single, continuous, purely strike-slip fault. This result is critical to understanding of the seismic behaviour of this region of the NAF, close to Istanbul. Additionally, morphological and geological evidence is found for a stable kinematics consistent both with the long-term displacement field determined for the past 5 Myr and with present-day Anatolia/Eurasia motion determined with GPS. However, within the Sea of Marmara region the fault kinematics involves asymmetric slip partitioning that appears to have extended throughout the evolution of the pull-apart. The loading associated with the westward propagation process of the NAF may have provided a favourable initial geometry for such a slip separation.

Notizen: To cope with iron deficiency fluorescent pseu-domonads produce pyoverdines which are complex peptidic siderophores that very efficiently scavenge iron. In addition to pyoverdine some species also produce other siderophores. Recently, it was shown that Pseudomonas fluorescens ATCC 17400 pro-duces the siderophore quinolobactin, an 8-hydroxy-4-methoxy-2-quinoline carboxylic acid (Mossialos, D., Meyer, J.M., Budzikiewicz, H., Wolff, U., Koedam, N., Baysse, C., Anjaiah, V., and Cornelis, P. (2000) Appl Environ Microbiol 66: 487–492). The entire quinolobactin biosynthetic, transport and uptake gene cluster, consisting out of two operons comprising 12 open reading frames, was cloned and sequenced. Based on the genes present and physiological complementation assays a biosynthetic pathway for quinolobactin is proposed. Surprisingly, this pathway turned out to combine genes derived from the eukaryotic tryptophan-xanthurenic acid branch of the kynurenine pathway and from the pathway for the biosynthesis of pyridine-2,6-bis(thiocarboxylic acid) from P. stutzeri, PDTC. These results clearly show the involvement of the tryptophan-kynurenine-xanthurenic acid pathway in the synthesis of an authentic quinoline siderophore.

Notizen: SUMMARY 1. We examined the relationship between catchment land cover, sediment regime and fish assemblage structure in four small streams in the upper Little Tennessee River basin of North Carolina. Study streams drained similar sized catchments (17–31 km2) with different fractions of non-forested land cover. Non-forested land cover was 〈3% in two ‘reference’ streams, whereas it was 13 and 22% in two ‘disturbed’ streams. Land cover data were compared with sediment transport data (suspended and bedload), benthic habitat data (embeddedness, substratum composition and coverage of fines) and fishes collected in autumn 1997.2. Suspended sediment concentration was significantly higher in disturbed streams during both baseflow and stormflow. During baseflow disturbed streams nearly always exceeded 10 nephelometric turbidity units (NTU), whereas reference streams never exceeded this threshold. The difference in suspended sediment concentration between reference and disturbed streams was more consistent at baseflow than at stormflow. Therefore, baseflow turbidity may be a useful indicator of potential stream degradation.3. Disturbed sites had five- to nine-fold more bedload transport than reference sites. Both embeddedness and streambed instability increased with increasing non-forested land cover.4. Relative abundance of fishes requiring clean cobble/gravel substratum for spawning was lower in disturbed streams, whereas relative abundance of mound-building cyprinids, their nest associates and fishes that excavate nests in soft sediments (centrarchids) was higher. Relative abundance of fishes spawning in benthic crevices and gravel (BC + G) declined as the proportion of non-forested land cover increased. This study supports growing evidence that human-induced sedimentation alters stream fish assemblages.

Notizen: 〈list style="custom"〉1The streams of French Polynesia contain several species of Neritidae and Thiaridae (Mollusca: Gastropoda). The neritids are dioecious and amphidromous with a freshwater adult stage and a poorly known, marine larval stage. The thiarids are parthenogenetic and viviparous, and rely on passive dispersal for colonisation of new habitats.2Populations of the neritid Clithon spinosus and the thiarids Melanoides tuberculata and Thiara granifera were analysed using mitochondrial DNA sequences from COI to compare the population structure of the snails at three different scales: between streams (N = 9), between islands (N = 4), and between age and distance of paired islands.3The amphidromous C. spinosus showed no evidence of genetic isolation at any of the scales tested (Fst values 〈inlineGraphic alt="leqslant R: less-than-or-eq, slant" extraInfo="nonStandardEntity" href="urn:x-wiley:00465070:FWB599:les" location="les.gif"/〉 0.02). Parsimony analyses resulted in two haplotype clusters separated by a three-step segment, which were not linked to geographic isolation. The larval phase of C. spinosus is most likely a long-lived planktotroph and a very effective disperser.4Two haplotypes of M. tuberculata, separated by 16 base pairs, were found. Both haplotypes were found in snails on all islands, and individuals representing both were often collected in the same habitat. One haplotype of T. granifera was found. M. tuberculata has the characteristics of the ‘general-purpose genotype’ of clonal population structure and although it relies on passive dispersal, it has colonised nearly all freshwater habitats on the islands.

Notizen: 1. Rhododendron (Rhododendron maximum) is a common evergreen shrub in riparian areas of the southern Appalachians, where its leaves can comprise a large proportion of leaf litter in streams. However, they are relatively refractory and generally considered a low quality food resource for detritivores.2. Our objective was to assess whether macroconsumers [primarily crayfish (Cambarus bartonii)] influence rhododendron leaf breakdown in a forested southern Appalachian stream in both summer (when leaves other than rhododendron are relatively scarce) and autumn (when other leaves are relatively abundant). We conducted two leaf decay experiments, one in summer and one in autumn, using pre-conditioned leaves. Macroconsumers were excluded from the benthos of a fourth-order stream using electric ‘fences’; we predicted that excluding macroconsumers would reduce the decay rate of rhododendron leaves in both summer and autumn.3. In both experiments, breakdown rate was lower in exclusion treatments. Macroconsumers accounted for approximately 33 and 54% of rhododendron decay in summer and autumn, respectively. We attribute this effect to direct shredding of rhododendron by crayfish. Biomass of insect shredders, insect predators and fungi did not differ between control and exclusion treatments, indicating that insectivorous sculpins (Cottus bairdi) had no effect on rhododendron decay and that omnivorous crayfish did not exert an indirect effect via alteration of insect or fungal biomass.4. The influence of shredding insects varied between summer and autumn. In summer, when other, more palatable leaf types were not available, rhododendron leaf packs appeared to provide ‘resource islands’ for insect shredders. There was a significant inverse relationship between insect shredders and leaf pack mass in the summer exclusion treatment: insects were the only organisms eating leaves in this treatment and, as shredder biomass increased, remaining leaf pack mass decreased. In the control treatment, however, we did not see this relationship; here, the effect of insect shredders was presumably swamped by the impact of crayfish. In autumn, when other leaves were abundant, insect shredder biomass in rhododendron leaf packs was less than one-third of summer values.5. Even at low density (approximately 2 m–2) crayfish were able to influence an ecosystem process such as leaf decay in both summer and autumn. Given the threatened status of many crayfish species in the United States, this finding is especially relevant. Even small alterations in crayfish assemblages, whether via loss of native species and/or introduction of exotic species, may have significant repercussions for ecosystem function.

Notizen: 1. The Lotic Intersite Nitrogen eXperiment (LINX) was a coordinated study of the relationships between North American biomes and factors governing ammonium uptake in streams. Our objective was to relate inter-biome variability of ammonium uptake to physical, chemical and biological processes.2. Data were collected from 11 streams ranging from arctic to tropical and from desert to rainforest. Measurements at each site included physical, hydraulic and chemical characteristics, biological parameters, whole-stream metabolism and ammonium uptake. Ammonium uptake was measured by injection of 15N-ammonium and downstream measurements of 15N-ammonium concentration.3. We found no general, statistically significant relationships that explained the variability in ammonium uptake among sites. However, this approach does not account for the multiple mechanisms of ammonium uptake in streams. When we estimated biological demand for inorganic nitrogen based on our measurements of in-stream metabolism, we found good correspondence between calculated nitrogen demand and measured assimilative nitrogen uptake.4. Nitrogen uptake varied little among sites, reflecting metabolic compensation in streams in a variety of distinctly different biomes (autotrophic production is high where allochthonous inputs are relatively low and vice versa).5. Both autotrophic and heterotrophic metabolism require nitrogen and these biotic processes dominate inorganic nitrogen retention in streams. Factors that affect the relative balance of autotrophic and heterotrophic metabolism indirectly control inorganic nitrogen uptake.

Notizen: The level of glutathione (GSH) in plants is important in defence reactions against biotic and abiotic stresses and can place considerable demand of the sulphur assimilation pathway. Enzymes involved in sulphur assimilation and GSH metabolism are not evenly distributed between different subcellular compartments or between different cell types in leaves or roots; however, there is little information on the effect that such asymmetries have on the actual GSH concentration in each compartment or cell type. In the present study in situ labelling with monochlorobimane (MCB) in combination with confocal laser scanning microscopy was used to quantify GSH in each of the main cell types of poplar leaves from fluorescence of the GSB conjugate formed. Comparison of results from the in situ approach with total GSH levels measured in vitro by high-performance liquid chromatography suggested that only the cytosolic GSH pool was labelled using this approach. This suggests that an appropriate GST was not present within the chloroplasts to catalyse the conjugation reaction and that chloroplastic GSH does not rapidly exchange with the cytoplasmic pool under the conditions of the assay. Cytosolic GSH levels were between 0.2 and 0.3 mm for both photosynthetic and non-photosynthetic (epidermal) cell types in wild-type poplar leaves. Cytosolic levels increased by around two-fold in transgenic poplars over-expressing bacterial γ-glutamylsynthetase (γ-ECS) in the cytosol of all cell types, but there was no concomitant increase in the chloroplastic GSH pool.

Notizen: In this study a method was designed to assess non-destructively the type of UV-screening compounds present in the leaf epidermis. The method is based on the recording and calculation of the ratio of UV-excitation spectra of chlorophyll fluorescence (FER) from the adaxial and abaxial sides of bifacial leaves, or from older and younger segments of monocotyledonous leaves. The logarithm of this ratio (logFER) matched the absorption spectrum of the UV-absorbers present in the leaf, as confirmed by its overlap with the absorption spectrum of the methanolic extract of the leaf or of the isolated epidermis. By using the logFER approach, it was possible to demonstrate that the concentration but not the classes of compounds present in the epidermis that are responsible for UV-screening is affected by the side and the age of the leaves. In contrast, measurements from the leaves of seven dicots and one monocot indicated large difference in the classes of these compounds between species. Finally, it was shown that the logFER in the UV is independent of the emission wavelength, and that the method can be used for quantitative measurements. This method expands to the spectral domain the use of ChlF for the estimation of the leaf epidermal transmittance.

Notizen: Throughout the world there is a trend towards retaining crop residues rather than burning them. For this reason, changes in soil chemistry and aggregation in a Vertisol induced by 59 years of burning or green cane harvesting with or without annual fertilizer applications were investigated. Crop residues were either burnt prior to harvest with the harvest residues raked off (R1), burnt prior to harvest with the harvest residues left on the soil surface (R2), or left unburnt with all the trash left on the soil surface (R3). Concentrations of organic C in the surface 10 cm of soil increased with fertilizer applications and with increasing amounts of crop residue returned in the order R1 〈 R2 〈 R3. Fertilizer applications caused an accumulation of residual P in both inorganic (Pi) and organic (Po) forms. A sequential P fractionation showed that fertilizer P accumulated in both labile and recalcitrant Pi and Po forms, and trash retention caused an accumulation of recalcitrant Po. Concentrations of K decreased in the unfertilized R1 and R2 treatments because K reserves were depleted. By contrast, there was an increase in the concentrations of K in the fertilized R3 treatment. The soil became more acid on the fertilized and, to a lesser extent, trash retention plots. We attribute this to nitrification and subsequent nitrate leaching. Acidification resulted in a loss of exchangeable Ca and Mg, a decrease in ECEC, and an increase in the concentrations of total and monomeric Al in soil solution, in exchangeable Al3+ and in the buffering reserve of non-exchangeable Al associated with organic matter. Aggregate stability was increased by increasing crop residues but decreased by fertilizer applications. The decrease was attributed to an increase in the proportion of exchangeable cations present in monovalent form due to applications of fertilizer K and leaching of Ca and Mg. We conclude that trash retention and annual fertilizer applications have substantial long-term effects on both organic matter status and soil pH and therefore on other soil chemical and physical properties.

Notizen: Maturation of c-type cytochromes in Escherichia coli is a complex process requiring eight membrane proteins encoded by the ccmABCDEFGH operon. CcmE is a mediator of haem delivery. It binds haem transiently at a conserved histidine residue and releases it for directed transfer to apocytochrome c. CcmC, an integral membrane protein with six transmembrane helices, is necessary and sufficient to incorporate haem covalently into CcmE. CcmC contains a highly conserved tryptophan-rich motif, WGXXWXWD, in its second periplasmic loop. Here, we present the results of a systematic mutational analysis of this motif. Changes of the non-conserved T121 and W122 to A resulted in wild-type CcmC activity. Changes of the single amino acids W119A, G120A, W123A, W125I and D126A or of the spacing within the motif by deleting V124 (ΔV124) inhibited the covalent haem incorporation into CcmE. Enhanced expression of ccmD suppressed this mutant phenotype by increasing the amounts of CcmC and CcmE polypeptides in the membrane. The ΔV124 mutant showed the strongest defect of all single mutants. Mutants in which six residues of the tryptophan-rich motif were changed showed no residual CcmC activity. This phenotype was independent of the level of ccmD expression. Our results demonstrate the functional importance of the tryptophan-rich motif for haem transfer to CcmE. We propose that the three membrane proteins CcmC, CcmD and CcmE interact directly with each other, establishing a cytoplasm to periplasm haem delivery pathway for cytochrome c maturation.