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  • 2010-2014  (23)
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  • 1
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    PANGAEA
    In:  Supplement to: Schlüter, Lothar; Lohbeck, Kai T; Gutowska, Magdalena A; Gröger, Joachim P; Riebesell, Ulf; Reusch, Thorsten B H (2014): Adaptation of a globally important coccolithophore to ocean warming and acidification. Nature Climate Change, https://doi.org/10.1038/NCLIMATE2379
    Publication Date: 2023-10-23
    Description: Although oceanwarming and acidification are recognized as two major anthropogenic perturbations of today's oceanswe know very little about how marine phytoplankton may respond via evolutionary change.We tested for adaptation to ocean warming in combination with ocean acidification in the globally important phytoplankton species Emiliania huxleyi. Temperature adaptation occurred independently of ocean acidifcation levels. Exponential growth rates were were up to 16% higher in populations adapted for one year to warming when assayed at their upper thermal tolerance limit. Particulate inorganic (PIC) and organic (POC) carbon production was restored to values under present-day ocean conditions, owing to adaptive evolution, and were 101% and 55% higher under combined warming and acidification, respectively, than in non-adapted controls. Cells also evolved to a smaller size while they recovered their initial PIC:POC ratio even under elevated CO2. The observed changes in coccolithophore growth, calcite and biomass production, cell size and elemental composition demonstrate the importance of evolutionary processes for phytoplankton performance in a future ocean. At the end of a 1-yr temperature selection phase, we conducted a reciprocal assay experiment in which temperature-adapted asexual populations were compared to the respective non-adapted control populations under high temperature, and vice versa (1. Assay Data, Dataset #835336). Mean exponential growth rates m in treatments subjected to high temperature increased rapidly under all high temperature-CO2 treatment combinations during the temperature selection phase (2. time series, Dataset #835339).
    Keywords: BIOACID; Biological Impacts of Ocean Acidification
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 2
    Publication Date: 2024-03-27
    Keywords: Absolute protein content; Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Biomass/Abundance/Elemental composition; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure, standard deviation; Chordata; Coast and continental shelf; DATE/TIME; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gadus morhua; Gadus morhua, larvae, dry mass; Growth/Morphology; Identification; Laboratory experiment; Mesocosm or benthocosm; Nekton; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Polar; Ribonucleic acid/Deoxyribonucleic acid ratio; Salinity; Salinity, standard deviation; Sample mass; Single species; Temperature, standard deviation; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 43580 data points
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  • 3
    Publication Date: 2024-03-27
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Biomass/Abundance/Elemental composition; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure, standard deviation; Chordata; Coast and continental shelf; DATE/TIME; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gadus morhua; Gadus morhua, larvae, dry mass; Gadus morhua, lipid content; Growth/Morphology; Laboratory experiment; Mesocosm or benthocosm; Nekton; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Polar; Salinity; Salinity, standard deviation; Sample ID; Single species; Species; Temperature, standard deviation; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 5663 data points
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  • 4
    Publication Date: 2024-03-27
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure, standard deviation; Chordata; Coast and continental shelf; DATE/TIME; Development; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gadus morhua; Gadus morhua, condition, eye; Gadus morhua, condition, gut; Gadus morhua, condition, gut, bacteria; Gadus morhua, condition, kidney; Gadus morhua, condition, liver; Gadus morhua, condition, notochord; Gadus morhua, condition, pancreas; Laboratory experiment; Mesocosm or benthocosm; Nekton; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; Polar; Salinity; Salinity, standard deviation; Sample ID; Single species; Species; Temperature, standard deviation; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 4089 data points
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  • 5
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    PANGAEA
    In:  Supplement to: Frommel, Andrea Y; Maneja, Rommel H; Lowe, David J; Malzahn, Arne; Geffen, Audrey J; Folkvord, Arild; Piatkowski, Uwe; Reusch, Thorsten B H; Clemmesen, Catriona (2012): Severe tissue damage in Atlantic cod larvae under increasing ocean acidification. Nature Climate Change, 2, 42-46, https://doi.org/10.1038/nclimate1324
    Publication Date: 2024-03-27
    Description: Ocean acidification, caused by increasing atmospheric concentrations of CO2, is one of the most critical anthropogenicthreats to marine life. Changes in seawater carbonate chemistry have the potential to disturb calcification, acid-base regulation, blood circulation and respiration, as well as the nervous system of marine organisms, leading to long-term effects such as reduced growth rates and reproduction. In teleost fishes, early life-history stages are particularly vulnerable as they lack specialized internal pH regulatory mechanisms. So far, impacts of relevant CO2concentrations on larval fish have been found in behaviour and otolith size, mainly in tropical, non-commercial species. Here we show detrimental effects of ocean acidification on the development of a mass-spawning fish species of high commercial importance. We reared Atlantic cod larvae at three levels of CO2, (1) present day, (2) end of next century and (3) an extreme, coastal upwelling scenario, in a long-term ( 2.5 1/2 months) mesocosm experiment. Exposure to CO2 resulted in severe to lethal tissue damage in many internal organs, with the degree of damage increasing with CO2 concentration. As larval survival is the bottleneck to recruitment, ocean acidification has the potential to act as an additional source of natural mortality, affecting populations of already exploited fish stocks.
    Keywords: Animalia; BIOACID; Biological Impacts of Ocean Acidification; Biomass/Abundance/Elemental composition; Chordata; Coast and continental shelf; Development; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Gadus morhua; Growth/Morphology; Laboratory experiment; Mesocosm or benthocosm; Nekton; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Pelagos; Polar; Single species
    Type: Dataset
    Format: application/zip, 3 datasets
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  • 6
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    PANGAEA
    In:  Supplement to: Lohbeck, Kai T; Riebesell, Ulf; Reusch, Thorsten B H (2012): Adaptive evolution of a key phytoplankton species to ocean acidification. Nature Geoscience, 5(5), 346-351, https://doi.org/10.1038/ngeo1441
    Publication Date: 2024-03-15
    Description: Ocean acidification, the drop in seawater pH associated with the ongoing enrichment of marine waters with carbon dioxide from fossil fuel burning, may seriously impair marine calcifying organisms. Our present understanding of the sensitivity of marine life to ocean acidification is based primarily on short-term experiments, in which organisms are exposed to increased concentrations of CO2. However, phytoplankton species with short generation times, in particular, may be able to respond to environmental alterations through adaptive evolution. Here, we examine the ability of the world's single most important calcifying organism, the coccolithophore Emiliania huxleyi, to evolve in response to ocean acidification in two 500-generation selection experiments. Specifically, we exposed E. huxleyi populations founded by single or multiple clones to increased concentrations of CO2. Around 500 asexual generations later we assessed their fitness. Compared with populations kept at ambient CO2 partial pressure, those selected at increased partial pressure exhibited higher growth rates, in both the single- and multiclone experiment, when tested under ocean acidification conditions. Calcification was partly restored: rates were lower under increased CO2 conditions in all cultures, but were up to 50% higher in adapted compared with non-adapted cultures. We suggest that contemporary evolution could help to maintain the functionality of microbial processes at the base of marine food webs in the face of global change.
    Keywords: Alkalinity, total; Aragonite saturation state; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, particulate, per cell; Carbon, organic, particulate, per cell; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cell size; Chromista; Emiliania huxleyi; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Haptophyta; Laboratory experiment; Laboratory strains; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate inorganic carbon/particulate organic carbon ratio; Particulate inorganic carbon production per cell; Particulate organic carbon production per cell; Pelagos; pH; Phosphate; Phytoplankton; Salinity; Single species; Species; Temperature, water; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 3150 data points
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  • 7
    Publication Date: 2024-03-15
    Keywords: Alkalinity, total; Aragonite saturation state; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, particulate, per cell; Carbon, organic, particulate, per cell; Carbon/Nitrogen ratio; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cell biovolume; Cell size; Chromista; Coulometric titration; Emiliania huxleyi; Experiment day; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Haptophyta; Laboratory experiment; Laboratory strains; Nitrogen, organic, particulate, per cell; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate inorganic carbon/particulate organic carbon ratio; Particulate inorganic carbon production per cell; Particulate organic carbon production per cell; Pelagos; pH; Phytoplankton; Potentiometric titration; Replicate; Salinity; Single species; Species; Temperature; Temperature, water; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 20349 data points
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  • 8
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    PANGAEA
    In:  Supplement to: Lohbeck, Kai T; Riebesell, Ulf; Collins, Sinéad; Reusch, Thorsten B H (2013): Functional genetic divergence in high CO2 adapted Emiliania Huxleyi populations. Evolution, 67(7), 1892-1900, https://doi.org/10.1111/j.1558-5646.2012.01812.x
    Publication Date: 2024-03-15
    Description: Predicting the impacts of environmental change on marine organisms, food webs, and biogeochemical cycles presently relies almost exclusively on short-term physiological studies, while the possibility of adaptive evolution is often ignored. Here, we assess adaptive evolution in the coccolithophore Emiliania huxleyi, a well-established model species in biological oceanography, in response to ocean acidification. We previously demonstrated that this globally important marine phytoplankton species adapts within 500 generations to elevated CO2. After 750 and 1000 generations, no further fitness increase occurred, and we observed phenotypic convergence between replicate populations. We then exposed adapted populations to two novel environments to investigate whether or not the underlying basis for high CO2-adaptation involves functional genetic divergence, assuming that different novel mutations become apparent via divergent pleiotropic effects. The novel environment "high light" did not reveal such genetic divergence whereas growth in a low-salinity environment revealed strong pleiotropic effects in high CO2 adapted populations, indicating divergent genetic bases for adaptation to high CO2. This suggests that pleiotropy plays an important role in adaptation of natural E. huxleyi populations to ocean acidification. Our study highlights the potential mutual benefits for oceanography and evolutionary biology of using ecologically important marine phytoplankton for microbial evolution experiments.
    Keywords: Alkalinity, total; Aragonite saturation state; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Emiliania huxleyi; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Generation; Growth/Morphology; Growth rate; Haptophyta; Laboratory experiment; Laboratory strains; Light; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phytoplankton; Population; Potentiometric titration; Replicates; Salinity; Single species; Species; Temperature, water; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 4800 data points
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  • 9
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    PANGAEA
    In:  Supplement to: Lohbeck, Kai T; Riebesell, Ulf; Reusch, Thorsten B H (2014): Gene expression changes in the coccolithophore Emiliania huxleyi after 500 generations of selection to ocean acidification. Proceedings of the Royal Society B-Biological Sciences, 281(1786), 20140003-20140003, https://doi.org/10.1098/rspb.2014.0003
    Publication Date: 2024-03-15
    Description: Coccolithophores are unicellular marine algae that produce biogenic calcite scales and substantially contribute to marine primary production and carbon export to the deep ocean. Ongoing ocean acidification particularly impairs calcifying organisms, mostly resulting in decreased growth and calcification. Recent studies revealed that the immediate physiological response in the coccolithophore Emiliania huxleyi to ocean acidification may be partially compensated by evolutionary adaptation, yet the underlying molecular mechanisms are currently unknown. Here, we report on the expression levels of 10 candidate genes putatively relevant to pH regulation, carbon transport, calcification and photosynthesis in E. huxleyi populations short-term exposed to ocean acidification conditions after acclimation (physiological response) and after 500 generations of high CO2 adaptation (adaptive response). The physiological response revealed downregulation of candidate genes, well reflecting the concomitant decrease of growth and calcification. In the adaptive response, putative pH regulation and carbon transport genes were up-regulated, matching partial restoration of growth and calcification in high CO2-adapted populations. Adaptation to ocean acidification in E. huxleyi likely involved improved cellular pH regulation, presumably indirectly affecting calcification. Adaptive evolution may thus have the potential to partially restore cellular pH regulatory capacity and thereby mitigate adverse effects of ocean acidification.
    Keywords: Alkalinity, total; Aragonite saturation state; Bicarbonate ion; BIOACID; Biological Impacts of Ocean Acidification; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chromista; Emiliania huxleyi; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gene expression (incl. proteomics); Gene name; Haptophyta; Laboratory experiment; Laboratory strains; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phosphate; Phytoplankton; Salinity; Sample code/label; Single species; Species; Temperature, water; Threshold cycle, quantitative polymerase chain reaction; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 15400 data points
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  • 10
    Publication Date: 2010-04-09
    Print ISSN: 0025-3162
    Electronic ISSN: 1432-1793
    Topics: Biology
    Published by Springer
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