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  • 2015-2019  (5)
  • 2000-2004
  • 2016  (5)
  • 1
    Publikationsdatum: 2016-05-01
    Beschreibung: The Triassic Fundy rift basin in Nova Scotia is a large (〉70 km wide) half-graben filled with alluvial, lacustrine and aeolian deposits. A major lithospheric lineament, the Cobequid–Chedabucto Fault Zone (CCFZ), which forms the tip of the Newfoundland–Gibraltar Fault Zone, occurs within the Fundy Basin. The timing of early movement on this important fault zone is poorly constrained. We present data from the alluvial and aeolian units that crop out adjacent to the CCFZ in the Minas sub-basin to determine the initiation of fault movement. We use the onset of alluvial fan deposition to infer when the fault became sufficiently active to create the intrabasinal topography and document the influence of fault activity on the intrabasinal drainage. The occurrence and preservation of aeolian deposits immediately adjacent to the CCFZ and concomitant with alluvial fan development suggests a wind shadow effect associated with the fault-generated topography. The onset of alluvial fan deposition associated directly with the fault occurred during Norian times, following an earlier phase of sedimentation in the Fundy Basin, and records a potentially important phase of plate reorganization during early Atlantic rifting.
    Print ISSN: 0305-8719
    Digitale ISSN: 2041-4927
    Thema: Geologie und Paläontologie
    Standort Signatur Erwartet Verfügbarkeit
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  • 2
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    Nature Publishing Group (NPG)
    Publikationsdatum: 2016-03-05
    Beschreibung: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Pearce, Warren -- Hartley, Sarah -- Nerlich, Brigitte -- England -- Nature. 2016 Mar 3;531(7592):35. doi: 10.1038/531035d.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Nottingham, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26935688" target="_blank"〉PubMed〈/a〉
    Schlagwort(e): Humans ; *Information Dissemination ; Research/*standards
    Print ISSN: 0028-0836
    Digitale ISSN: 1476-4687
    Thema: Biologie , Chemie und Pharmazie , Medizin , Allgemeine Naturwissenschaft , Physik
    Standort Signatur Erwartet Verfügbarkeit
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  • 3
    Publikationsdatum: 2016-12-23
    Beschreibung: Neonicotinoids are neurotoxic systemic insecticides used in plant protection worldwide. Unfortunately, application of neonicotinoids affects both beneficial and target insects indiscriminately. Being water soluble and persistent, these pesticides are capable of disrupting both food chains and biogeochemical cycles. This review focuses on the biodegradation of neonicotinoids in soil and water systems by the bacterial community. Several bacterial strains have been isolated and identified as capable of transforming neonicotinoids in the presence of an additional carbon source. Environmental parameters have been established for accelerated transformation in some of these strains. Studies have also indicated that enhanced biotransformation of these pesticides can be accomplished by mixed microbial populations under optimised environmental conditions. Substantial research into the identification of neonicotinoid-mineralising bacterial strains and identification of the genes and enzymes responsible for neonicotinoid degradation is still required to complete the understanding of microbial biodegradation pathways, and advance bioremediation efforts.
    Schlagwort(e): Environmental Microbiology
    Print ISSN: 0378-1097
    Digitale ISSN: 1574-6968
    Thema: Biologie
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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  • 4
    Publikationsdatum: 2016-03-08
    Beschreibung: Climate data created from historic climate observations are integral to most assessments of potential climate change impacts, and frequently comprise the baseline period used to infer species-climate relationships. They are often also central to downscaling coarse resolution climate simulations from General Circulation Models (GCMs) in order to project future climate scenarios at ecologically relevant spatial scales. Uncertainty in these baseline data can be large, particularly where weather observations are sparse and climate dynamics are complex (e.g. over mountainous or coastal regions). Yet, importantly, this uncertainty is almost universally overlooked when assessing potential responses of species to climate change. Here we assessed the importance of historic baseline climate uncertainty for projections of species’ responses to future climate change. We built species distribution models (SDMs) for 895 African bird species of conservation concern, using six different climate baselines. We projected these models to two future periods (2040-2069, 2070-2099), using downscaled climate projections, and calculated species turnover and changes in species-specific climate suitability. We found that the choice of baseline climate data constituted an important source of uncertainty in projections of both species turnover and species-specific climate suitability, often comparable with, or more important than, uncertainty arising from the choice of GCM. Importantly, the relative contribution of these factors to projection uncertainty varied spatially. Moreover, when projecting SDMs to sites of biodiversity importance (Important Bird and Biodiversity Areas), these uncertainties altered site-level impacts, which could affect conservation prioritisation. Our results highlight that projections of species’ responses to climate change are sensitive to uncertainty in the baseline climatology. We recommend that this should be considered routinely in such analyses. This article is protected by copyright. All rights reserved.
    Print ISSN: 1354-1013
    Digitale ISSN: 1365-2486
    Thema: Biologie , Energietechnik , Geographie
    Publiziert von Wiley
    Standort Signatur Erwartet Verfügbarkeit
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  • 5
    Publikationsdatum: 2016-09-03
    Beschreibung: Although RNA-Seq data provide unprecedented isoform-level expression information, detection of alternative isoform regulation (AIR) remains difficult, particularly when working with an incomplete transcript annotation. We introduce JunctionSeq, a new method that builds on the statistical techniques used by the well-established DEXSeq package to detect differential usage of both exonic regions and splice junctions. In particular, JunctionSeq is capable of detecting differential usage of novel splice junctions without the need for an additional isoform assembly step, greatly improving performance when the available transcript annotation is flawed or incomplete. JunctionSeq also provides a powerful and streamlined visualization toolset that allows bioinformaticians to quickly and intuitively interpret their results. We tested our method on publicly available data from several experiments performed on the rat pineal gland and Toxoplasma gondii , successfully detecting known and previously validated AIR genes in 19 out of 19 gene-level hypothesis tests. Due to its ability to query novel splice sites, JunctionSeq is still able to detect these differences even when all alternative isoforms for these genes were not included in the transcript annotation. JunctionSeq thus provides a powerful method for detecting alternative isoform regulation even with low-quality annotations. An implementation of JunctionSeq is available as an R/Bioconductor package.
    Schlagwort(e): Transcriptome Mapping - Monitoring Gene Expression
    Print ISSN: 0305-1048
    Digitale ISSN: 1362-4962
    Thema: Biologie
    Publiziert von Oxford University Press
    Standort Signatur Erwartet Verfügbarkeit
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