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  • 1
    Publication Date: 2014-06-10
    Description: Loss–of-function mutations in PAK3 contribute to non-syndromic X-linked intellectual disability (NS-XLID) by affecting dendritic spine density and morphology. Linkage analysis in a three-generation family with affected males showing ID, agenesis of corpus callosum, cerebellar hypoplasia, microcephaly and ichthyosis, revealed a candidate disease locus in Xq21.33q24 encompassing over 280 genes. Subsequent to sequencing all coding exons of the X chromosome, we identified a single novel variant within the linkage region, affecting a conserved codon of PAK3 . Biochemical studies showed that, similar to previous NS-XLID-associated lesions, the predicted amino acid substitution (Lys389Asn) abolished the kinase activity of PAK3. In addition, the introduced residue conferred a dominant-negative function to the protein that drives the syndromic phenotype. Using a combination of in vitro and in vivo studies in zebrafish embryos, we show that PAK3 N389 escapes its physiologic degradation and is able to perturb MAPK signaling via an uncontrolled kinase-independent function, which in turn leads to alterations of cerebral and craniofacial structures in vivo . Our data expand the spectrum of phenotypes associated with PAK3 mutations, characterize a novel mechanism resulting in a dual molecular effect of the same mutation with a complex PAK3 functional deregulation and provide evidence for a direct functional impact of aberrant PAK3 function on MAPK signaling.
    Print ISSN: 0964-6906
    Electronic ISSN: 1460-2083
    Topics: Biology , Medicine
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  • 2
    Publication Date: 2009-10-22
    Description: The sulfur cycle and radiative effects of sulfate aerosol on climate are studied with a Global tropospheric Climate-Chemistry Model in which chemistry, radiation and dynamics are fully coupled. Production and removal mechanisms of sulfate are analyzed for the conditions of natural and anthropogenic sulfur emissions. Results show that the 1985 anthropogenic emission doubled the global SO2 and sulfate loadings from its natural value of 0.15 and 0.27 Tg S, respectively. Under natural conditions, the fraction of sulfate produced in-cloud is 87%, and the lifetime of SO2 and sulfate are 1.8 and 4.0 days, respectively; whereas with anthropogenic emissions, changes in in-cloud sulfate production are small, while SO2 and sulfate lifetimes are significant reduced (1.0 and 2.4 days, respectively). The doubling of sulfate results in a direct radiative forcing of −0.32 and −0.14 W m−2 under clear-sky and all-sky conditions, respectively, and a significant first indirect forcing of −1.69 W m−2. The first indirect forcing is sensitive to the relationship between aerosol concentration and cloud droplet number concentration. Two aspects of chemistry-climate interaction are addressed. Firstly, the coupling effects lead to 10% and 2% decreases in sulfate loading, respectively, for the cases of natural and anthropogenic added sulfur emissions. Secondly, only the indirect effect of sulfate aerosols yields significantly stronger signals in changes of near surface temperature and sulfate loading than changes due to intrinsic climate variability, while other responses to the indirect effect and all responses to the direct effect are weak.
    Electronic ISSN: 1680-7375
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 3
    Publication Date: 2010-04-21
    Description: The sulfur cycle and radiative effects of sulfate aerosol on climate are studied with a Global tropospheric Climate-Chemistry Model in which chemistry, radiation and dynamics are fully coupled. Production and removal mechanisms of sulfate are analyzed for the conditions of natural and anthropogenic sulfur emissions. Results show that the 1985 anthropogenic emission tripled the global SO2 and sulfate loadings from its natural value of 0.16 and 0.10 Tg S, respectively. Under natural conditions, the fraction of sulfate produced in-cloud is 74%; whereas with anthropogenic emissions, the fraction of in-cloud sulfate production slightly increased to 76%. Lifetimes of SO2 and sulfate under polluted conditions are estimated to be 1.7 and 2.0 days, respectively. The tripling of sulfate results in a direct radiative forcing of −0.43 W m−2 (clear-sky) or −0.24 W m−2 (all-sky), and a significant first indirect forcing of −1.85 W m−2, leading to a mean global cooling of about 0.1 K. Regional forcing and responses are significantly stronger than the global values. The first indirect forcing is sensitive to the relationship between aerosol concentration and cloud droplet number concentration which requires further investigation. Two aspects of chemistry-climate interaction are addressed. Firstly, the coupling effects lead to a slight decrease of 1% in global sulfate loading for both the cases of natural and anthropogenic added sulfur emissions. Secondly, only the indirect effect of sulfate aerosols yields significantly stronger signals in changes of near surface temperature and sulfate loading than changes due to intrinsic climate variability, while other responses to the indirect effect and all responses to the direct effect are below noise level.
    Print ISSN: 1680-7316
    Electronic ISSN: 1680-7324
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 4
    Publication Date: 2013-10-30
    Description: A new modal aerosol parameterization scheme, the statistical–numerical aerosol parameterization (SNAP), was developed for studying aerosol processes and aerosol–cloud interactions in regional or global models. SNAP applies statistical fitting on numerical results to generate accurate parameterization formulas without sacrificing details of the growth kernel. Processes considered in SNAP include fundamental aerosol processes as well as processes related to aerosol–cloud interactions. Comparison of SNAP with numerical solutions, analytical solutions, and binned aerosol model simulations showed that the new method performs well, with accuracy higher than that of the high-order numerical quadrature technique, and with much less computation time. The SNAP scheme has been implemented in regional air quality models, producing results very close to those using binned-size schemes or numerical quadrature schemes.
    Print ISSN: 1680-7316
    Electronic ISSN: 1680-7324
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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  • 5
    Publication Date: 2013-05-08
    Description: A new modal aerosol parameterization scheme, Statistical-Numerical Aerosol Parameterization (SNAP), was developed for studying aerosol processes and aerosol-cloud interactions in regional or global models. SNAP applies statistical fitting on numerical results to generate accurate parameterization formulas without sacrificing details of the growth kernel. Processes considered in SNAP include fundamental aerosol processes, as well as processes related to aerosol-cloud interactions. Comparison of SNAP with numerical solutions, analytical solutions, and binned aerosol model simulations showed that the new method performs well, with accuracy higher than that of the high-order numerical quadrature technique, at much less computation time. The SNAP scheme has been implemented in regional air quality models, producing results very close to those using binned-size schemes or numerical quadrature schemes.
    Electronic ISSN: 1680-7375
    Topics: Geosciences
    Published by Copernicus on behalf of European Geosciences Union.
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