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  • 1
    Publication Date: 2010-04-13
    Description: Rhodopsin is a prototypical heptahelical family A G-protein-coupled receptor (GPCR) responsible for dim-light vision. Light isomerizes rhodopsin's retinal chromophore and triggers concerted movements of transmembrane helices, including an outward tilting of helix 6 (H6) and a smaller movement of H5, to create a site for G-protein binding and activation. However, the precise temporal sequence and mechanism underlying these helix rearrangements is unclear. We used site-directed non-natural amino acid mutagenesis to engineer rhodopsin with p-azido-l-phenylalanine residues incorporated at selected sites, and monitored the azido vibrational signatures using infrared spectroscopy as rhodopsin proceeded along its activation pathway. Here we report significant changes in electrostatic environments of the azido probes even in the inactive photoproduct Meta I, well before the active receptor state was formed. These early changes suggest a significant rotation of H6 and movement of the cytoplasmic part of H5 away from H3. Subsequently, a large outward tilt of H6 leads to opening of the cytoplasmic surface to form the active receptor photoproduct Meta II. Thus, our results reveal early conformational changes that precede larger rigid-body helix movements, and provide a basis to interpret recent GPCR crystal structures and to understand conformational sub-states observed during the activation of other GPCRs.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ye, Shixin -- Zaitseva, Ekaterina -- Caltabiano, Gianluigi -- Schertler, Gebhard F X -- Sakmar, Thomas P -- Deupi, Xavier -- Vogel, Reiner -- England -- Nature. 2010 Apr 29;464(7293):1386-9. doi: 10.1038/nature08948. Epub 2010 Apr 11.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Laboratory of Molecular Biology and Biochemistry, The Rockefeller University, 1230 York Avenue, New York, New York 10065, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/20383122" target="_blank"〉PubMed〈/a〉
    Keywords: Azides/analysis/*metabolism/radiation effects ; Cell Line ; Humans ; *Infrared Rays ; Models, Molecular ; Movement ; Phenylalanine/*analogs & derivatives/analysis/genetics/metabolism/radiation ; effects ; Protein Conformation ; Rhodopsin/chemistry/*genetics/*metabolism ; Spectroscopy, Fourier Transform Infrared ; Static Electricity ; Vibration
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2008-04-26
    Print ISSN: 1420-682X
    Electronic ISSN: 1420-9071
    Topics: Biology , Medicine
    Published by Springer
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  • 3
    Publication Date: 2011-12-22
    Description: Geophysical (tilt, seismic tremor and gravity signals), geochemical (crater SO2 flux) and infrared satellite measurements are presented and discussed to track the temporal evolution of the lava fountain episode occurring at Mt Etna volcano on 10 April 2011. The multi-disciplinary approach provides insight into a gas-rich magma source trapped in a shallow storage zone inside the volcano edifice. This generated the fast ascending gas-magma dispersed flow feeding the lava fountain and causing the depressurization of a deeper magma storage. Satellite thermal data allowed estimation of the amount of erupted lava, which, summed to the tephra volume, yielded a total volume of erupted products of about 1 × 106 m3. Thanks to the daylight occurrence of this eruptive episode, the SO2 emission rate was also estimated, showing a degassing cycle reaching a peak of 15,000 Mg d−1 with a mean daily value of ∼5,700 Mg d−1. The SO2 data from the previous fountain episode on 17–18 February to 10 April 2011, yielded a cumulative degassed magma volume of about ∼10.5 × 106 m3, indicating a ratio of roughly 10:1 between degassed and erupted volumes. This volumetric balance, differently from those previously estimated during different styles of volcanic activities with long-term (years) recharging periods and middle-term (weeks to months) effusive eruptions, points toward the predominant role played by the gas phase in generating and driving this lava fountain episode.
    Print ISSN: 0094-8276
    Electronic ISSN: 1944-8007
    Topics: Geosciences , Physics
    Published by Wiley on behalf of American Geophysical Union (AGU).
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