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  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2015. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 120 (2015): 3624–3639, doi:10.1002/2014JC010352.
    Description: The net ecosystem metabolism of the seagrass Thalassia testudinum was studied across a nutrient and productivity gradient in Florida Bay, Florida, using the Eulerian control volume, eddy covariance, and biomass addition techniques. In situ oxygen fluxes were determined by a triangular Eulerian control volume with sides 250 m long and by eddy covariance instrumentation at its center. The biomass addition technique evaluated the aboveground seagrass productivity through the net biomass added. The spatial and temporal resolutions, accuracies, and applicability of each method were compared. The eddy covariance technique better resolved the short-term flux rates and the productivity gradient across the bay, which was consistent with the long-term measurements from the biomass addition technique. The net primary production rates from the biomass addition technique, which were expected to show greater autotrophy due to the exclusion of sediment metabolism and belowground production, were 71, 53, and 30 mmol carbon m−2 d−1 at 3 sites across the bay. The net ecosystem metabolism was 35, 25, and 11 mmol oxygen m−2 d−1 from the eddy covariance technique and 10, −103, and 14 mmol oxygen m−2 d−1 from the Eulerian control volume across the same sites, respectively. The low-flow conditions in the shallow bays allowed for periodic stratification and long residence times within the Eulerian control volume that likely reduced its precision. Overall, the eddy covariance technique had the highest temporal resolution while producing accurate long-term flux rates that surpassed the capabilities of the biomass addition and Eulerian control volume techniques in these shallow coastal bays.
    Description: This research was conducted under Everglades National Park permit # EVER-2011-SCI-0057. This study received financial support from the Jones Environmental and Barley Scholars Program at the University of Virginia and the National Science Foundation (Chemical Oceanography grant OCE-0536431).
    Description: 2015-11-22
    Keywords: Eddy covariance ; Eulerian ; Metabolism ; Seagrass ; Eddy correlation
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 2
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Trotter, J. A., Pattiaratchi, C., Montagna, P., Taviani, M., Falter, J., Thresher, R., Hosie, A., Haig, D., Foglini, F., Hua, Q., & McCulloch, M. T. First ROV exploration of the Perth Canyon: Canyon setting, faunal observations, and anthropogenic impacts. Frontiers in Marine Science, 6, (2019):173, doi:10.3389/fmars.2019.00173.
    Description: This study represents the first ROV-based exploration of the Perth Canyon, a prominent submarine valley system in the southeast Indian Ocean offshore Fremantle (Perth), Western Australia. This multi-disciplinary study characterizes the canyon topography, hydrography, anthropogenic impacts, and provides a general overview of the fauna and habitats encountered during the cruise. ROV surveys and sample collections, with a specific focus on deep-sea corals, were conducted at six sites extending from the head to the mouth of the canyon. Multi-beam maps of the canyon topography show near vertical cliff walls, scarps, and broad terraces. Biostratigraphic analyses of the canyon lithologies indicate Late Paleocene to Late Oligocene depositional ages within upper bathyal depths (200–700 m). The video footage has revealed a quiescent ‘fossil canyon’ system with sporadic, localized concentrations of mega- and macro-benthos (∼680–1,800 m), which include corals, sponges, molluscs, echinoderms, crustaceans, brachiopods, and worms, as well as plankton and nekton (fish species). Solitary (Desmophyllum dianthus, Caryophyllia sp., Vaughanella sp., and Polymyces sp.) and colonial (Solenosmilia variabilis) scleractinians were sporadically distributed along the walls and under overhangs within the canyon valleys and along its rim. Gorgonian, bamboo, and proteinaceous corals were present, with live Corallium often hosting a diverse community of organisms. Extensive coral graveyards, discovered at two disparate sites between ∼690–720 m and 1,560–1,790 m, comprise colonial (S. variabilis) and solitary (D. dianthus) scleractinians that flourished during the last ice age (∼18 ka to 33 ka BP). ROV sampling (674–1,815 m) spanned intermediate (Antarctic Intermediate Water) and deep waters (Upper Circumpolar Deep Water) with temperatures from ∼2.5 to 6°C. Seawater CTD profiles of these waters show consistent physical and chemical conditions at equivalent depths between dive sites. Their carbonate chemistry indicate supersaturation (Ωcalcite ∼ 1.3–2.2) with respect to calcite, but mild saturation to undersaturation (Ωaragonite ∼ 0.8–1.4) of aragonite; notably some scleractinians were found living below the aragonite saturation horizon (∼1,000 m). Seawater δ13C and nuclear bomb produced Δ14C compositions decrease in the upper canyon waters by up to ∼0.8‰ (〈800 m) and 95‰ (〈500 m), respectively, relative to measurements taken nearby in 1978, reflecting the ingress of anthropogenic carbon into upper intermediate waters.
    Description: This work was supported by research funding from the Australian Research Council to MM (FL120100049) and JT (FT160100259), the Italian National Programme of Antarctic Research (PNRA16-00069 Graceful Project) to PM and MT, the Australian Institute of Nuclear Science and Engineering to MM, JT, JF, RT, MT, PM (AINSE Award 16/009). Supplementary oceanographic data are funded through Integrated Marine Observing System (IMOS) supported by the Australian Government.
    Keywords: Perth Canyon ; deep-sea coral ; oceanography ; south-west Australia ; remotely operated vehicle
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 3
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    PANGAEA
    In:  Supplement to: D'Olivo, Juan Pablo; Georgiou, Lucy; Falter, James L; DeCarlo, Thomas M; Irigoien, Xabier; Voolstra, Christian R; Roder, Cornelia; Trotter, Julie; McCulloch, Malcolm T (2019): Long‐Term Impacts of the 1997–1998 Bleaching Event on the Growth and Resilience of Massive Porites Corals From the Central Red Sea. Geochemistry, Geophysics, Geosystems, 20(6), 2936-2954, https://doi.org/10.1029/2019GC008312
    Publication Date: 2023-01-30
    Description: Near monthly records of trace element ratios (Mg/Ca, Sr/Ca, U/Ca, Li/Mg, B/Ca and Li/Ca) for two cores of Porites corals from the inshore reef of Abu Shosha (approximately 1994-2013) and the outer-shelf reef Shi'b Nazar (approximately 1991-2013) near Thuwal in the central Red Sea. Data analysed by inductively coupled plasma masss spectrometer (ICP-MS).
    Keywords: Bleaching; Coral; Li/Mg; Porites; Red Sea; Sr/Ca; trace elements
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 4
    Publication Date: 2023-02-12
    Keywords: Bleaching; Central Red Sea; Coral; Core; CORE; DATE/TIME; DISTANCE; ICP-MS; Li/Mg; Porites; Porites lutea, Boron/Calcium ratio; Porites lutea, Boron/Magnesium ratio; Porites lutea, Lithium/Calcium ratio; Porites lutea, Lithium/Magnesium ratio; Porites lutea, Magnesium/Calcium ratio; Porites lutea, Strontium/Calcium ratio; Porites lutea, Uranium/Calcium ratio; Red Sea; Sample ID; Sr/Ca; Thuwal-RED4; trace elements
    Type: Dataset
    Format: text/tab-separated-values, 1520 data points
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  • 5
    Publication Date: 2023-02-12
    Keywords: Bleaching; Central Red Sea; Coral; Core; CORE; DATE/TIME; DISTANCE; ICP-MS; Li/Mg; Porites; Porites australiensis, Boron/Calcium ratio; Porites australiensis, Boron/Magnesium ratio; Porites australiensis, Lithium/Calcium ratio; Porites australiensis, Lithium/Magnesium ratio; Porites australiensis, Magnesium/Calcium ratio; Porites australiensis, Strontium/Calcium ratio; Porites australiensis, Uranium/Calcium ratio; Red Sea; Sample ID; Sr/Ca; Thuwal-RED2; trace elements
    Type: Dataset
    Format: text/tab-separated-values, 1593 data points
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  • 6
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    PANGAEA
    In:  Supplement to: McCulloch, Malcolm T; Trotter, Julie; Montagna, Paolo; Falter, James L; Dunbar, Robert G; Freiwald, André; Försterra, Günter; López Correa, Matthias; Maier, Cornelia; Rüggeberg, Andres; Taviani, Marco (2012): Resilience of cold-water scleractinian corals to ocean acidification: Boron isotopic systematics of pH and saturation state up-regulation. Geochimica et Cosmochimica Acta, 87, 21-34, https://doi.org/10.1016/j.gca.2012.03.027
    Publication Date: 2023-12-13
    Description: The boron isotope systematics has been determined for azooxanthellate scleractinian corals from a wide range of both deep-sea and shallow-water environments. The aragonitic coral species, Caryophyllia smithii, Desmophyllum dianthus, Enallopsammia rostrata, Lophelia pertusa, and Madrepora oculata, are all found to have relatively high d11B compositions ranging from 23.2 per mil to 28.7 per mil. These values lie substantially above the pH-dependent inorganic seawater borate equilibrium curve, indicative of strong up-regulation of pH of the internal calcifying fluid (pH(cf)), being elevated by ~0.6-0.8 units (Delta pH) relative to ambient seawater. In contrast, the deep-sea calcitic coral Corallium sp. has a significantly lower d11B composition of 15.5 per mil, with a corresponding lower Delta pH value of ~0.3 units, reflecting the importance of mineralogical control on biological pH up-regulation. The solitary coral D. dianthus was sampled over a wide range of seawater pH(T) and shows an approximate linear correlation with Delta pH(Desmo) = 6.43 - 0.71 pH(T) (r**2 = 0.79). An improved correlation is however found with the closely related parameter of seawater aragonite saturation state, where Delta pH(Desmo) = 1.09 - 0.14 Omega(arag) (r**2 = 0.95), indicating the important control that carbonate saturation state has on calcification. The ability to up-regulate internal pH(cf), and consequently Omega(cf), of the calcifying fluid is therefore a process present in both azooxanthellate and zooxanthellate aragonitic corals, and is attributed to the action of Ca2+ -ATPase in modulating the proton gradient between seawater and the site of calcification. These findings also show that the boron isotopic compositions (d11Bcarb) of aragonitic corals are highly systematic and consistent with direct uptake of the borate species within the biologically controlled extracellular calcifying medium.
    Keywords: HERMIONE; Hotspot Ecosystem Research and Mans Impact On European Seas; International Polar Year (2007-2008); IPY
    Type: Dataset
    Format: application/zip, 2 datasets
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  • 7
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    PANGAEA
    In:  Supplement to: Foster, Taryn; Gilmour, J P; Chua, C M; Falter, James L; McCulloch, Malcolm T (2015): Effect of ocean warming and acidification on the early life stages of subtropical Acropora spicifera. Coral Reefs, 34(4), 1217-1226, https://doi.org/10.1007/s00338-015-1342-7
    Publication Date: 2024-03-15
    Description: This study investigated the impacts of acidified seawater (pCO2 900 µatm) and elevated water temperature (+3 °C) on the early life history stages of Acropora spicifera from the subtropical Houtman Abrolhos Islands (28°S) in Western Australia. Settlement rates were unaffected by high temperature (27 °C, 250 µatm), high pCO2 (24 °C, 900 µatm), or a combination of both high temperature and high pCO2 treatments (27 °C, 900 µatm). There were also no significant differences in rates of post-settlement survival after 4 weeks of exposure between any of the treatments, with survival ranging from 60 to 70 % regardless of treatment. Similarly, calcification, as determined by the skeletal weight of recruits, was unaffected by an increase in water temperature under both ambient and high pCO2 conditions. In contrast, high pCO2 significantly reduced early skeletal development, with mean skeletal weight in the high pCO2 and combined treatments reduced by 60 and 48 %, respectively, compared to control weights. Elevated temperature appeared to have a partially mitigative effect on calcification under high pCO2; however, this effect was not significant. Our results show that rates of settlement, post-settlement survival, and calcification in subtropical corals are relatively resilient to increases in temperature. This is in marked contrast to the sensitivity to temperature reported for the majority of tropical larvae and recruits in the literature. The subtropical corals in this study appear able to withstand an increase in temperature of 3 °C above ambient, indicating that they may have a wider thermal tolerance range and may not be adversely affected by initial increases in water temperature from subtropical 24 to 27 °C. However, the reduction in skeletal weight with high pCO2 indicates that early skeletal formation will be highly vulnerable to the changes in ocean pCO2 expected to occur over the twenty-first century, with implications for their longer-term growth and resilience.
    Keywords: Abrolhos_Islands; Acropora spicifera; Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Calcification/Dissolution; Calcification rate; Calcification rate, standard error; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Laboratory experiment; Mass; Mass, standard error; Mortality/Survival; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Registration number of species; Reproduction; Salinity; Settlement; Settlement, standard error; Single species; South Pacific; Species; Survival; Survival rate, standard error; Temperate; Temperature; Temperature, water; Temperature, water, standard deviation; Treatment; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 132 data points
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  • 8
    Publication Date: 2024-02-02
    Keywords: Area/locality; Caryophyllia smithii, δ11B; Comau Fjord, Patagonia, Chile; Corallium sp., δ11B; D248; D248_13831#1; Darwin Mounds; DD_MS; Desmophyllum dianthus, δ11B; Discovery (1962); Dredge; DRG; Elevation of event; Elevation of event 2; Enallopsammia rostrata, δ11B; Event label; GeoB6739-1; GeoB8021-1; GS: M70/1-752 (D 111); Hawaiian Islands, North Central Pacific; Hill_B1; Latitude of event; Longitude of event; Lophelia pertusa, δ11B; M70/1; M70/1_752; Madrepora oculata, δ11B; MAL; Marmara Sea; MedCor_MAL; MedCor-25-D; MedCor-25-L; MedCor-41-CA; MedCor-57-CA; MedCor-59-CA; MedCor-74-D; MedCor-74-L; Mediterranean Sea; Meteor (1986); Monitoring station; MONS; Northeast Atlantic; Parameter; pH; pH change; PO228-216; Porcupine Seabight; POS265; POS292; POS499-1; POS544-1; Poseidon; Punto_Llonco; PV703_Cor_5; PV703_Enal_2; PV703_Enal_7; Remote operated vehicle; ROV; Sample ID; Species; SR: POS-228-216; Tasman Sea; TRAWL; Trawl net; VH97-351
    Type: Dataset
    Format: text/tab-separated-values, 168 data points
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  • 9
    Publication Date: 2024-02-02
    Keywords: Alkalinity, total; Aragonite saturation state; Aragonite saturation state, standard deviation; Area/locality; Calcite saturation state; Calcite saturation state, standard deviation; Comau Fjord, Patagonia, Chile; D248; D248_13831#1; Darwin Mounds; Date/Time of event; DD_MS; Discovery (1962); Dredge; DRG; ELEVATION; Elevation, maximum; Elevation, minimum; Event label; GeoB6739-1; GeoB8021-1; GS: M70/1-752 (D 111); Hawaiian Islands, North Central Pacific; Hill_B1; Latitude of event; Longitude of event; M70/1; M70/1_752; MAL; Marmara Sea; MedCor_MAL; MedCor-25-D; MedCor-25-L; MedCor-41-CA; MedCor-57-CA; MedCor-59-CA; MedCor-74-D; MedCor-74-L; Mediterranean Sea; Meteor (1986); Monitoring station; MONS; Northeast Atlantic; pH; PO228-216; Porcupine Seabight; POS265; POS292; POS499-1; POS544-1; Poseidon; Punto_Llonco; PV703_Cor_5; PV703_Enal_2; PV703_Enal_7; Reference/source; Remote operated vehicle; ROV; Salinity; Sample ID; Species; SR: POS-228-216; Tasman Sea; Temperature, water; TRAWL; Trawl net; VH97-351
    Type: Dataset
    Format: text/tab-separated-values, 220 data points
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  • 10
    Publication Date: 2007-05-11
    Print ISSN: 0148-0227
    Electronic ISSN: 2156-2202
    Topics: Geosciences
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