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  • 1
    Publication Date: 2004-06-26
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Freitag, Michael -- Lee, Dong W -- Kothe, Gregory O -- Pratt, Robert J -- Aramayo, Rodolfo -- Selker, Eric U -- GM35690/GM/NIGMS NIH HHS/ -- GM58770/GM/NIGMS NIH HHS/ -- R01 GM058770/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 2004 Jun 25;304(5679):1939.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Molecular Biology, University of Oregon, Eugene, OR 97403, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/15218142" target="_blank"〉PubMed〈/a〉
    Keywords: *DNA Methylation ; DNA, Fungal/metabolism ; Fungal Proteins/metabolism ; Gene Silencing ; Heterochromatin/metabolism ; Histone-Lysine N-Methyltransferase/metabolism ; Mutation ; Neurospora crassa/*genetics/metabolism ; Protein Methyltransferases ; *RNA Interference
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 2
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 2003-06-07
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Selker, Eric U -- New York, N.Y. -- Science. 2003 Jun 6;300(5625):1517-8.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/12791973" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Base Sequence ; Cell Nucleus/metabolism ; DNA Transposable Elements ; DNA, Protozoan/genetics/*metabolism ; Genes, Protozoan ; *Genome, Protozoan ; Methylation ; Models, Genetic ; Protozoan Proteins/genetics/metabolism ; RNA Interference ; RNA, Double-Stranded/*metabolism ; RNA, Protozoan/*metabolism ; Repetitive Sequences, Nucleic Acid ; *Sequence Deletion ; Tetrahymena thermophila/*genetics/growth & development/metabolism ; Transgenes
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 1993-12-10
    Description: The function and regulation of DNA methylation in eukaryotes remain unclear. Genes affecting methylation were identified in the fungus Neurospora crassa. A mutation in one gene, dim-2, resulted in the loss of all detectable DNA methylation. Abnormal segregation of the methylation defects in crosses led to the discovery that the methylation mutants frequently generate strains with extra chromosomes or chromosomal parts. Starvation for S-adenosylmethionine, the presumed methyl group donor for DNA methylation, also produced aneuploidy. These results suggest that DNA methylation plays a role in the normal control of chromosome behavior.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Foss, H M -- Roberts, C J -- Claeys, K M -- Selker, E U -- GM-35690/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1993 Dec 10;262(5140):1737-41.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Molecular Biology, University of Oregon, Eugene 97403.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/7505062" target="_blank"〉PubMed〈/a〉
    Keywords: 5-Methylcytosine ; Aneuploidy ; Azacitidine/pharmacology ; Blotting, Southern ; Chromosomes, Fungal/*metabolism ; Crosses, Genetic ; Cytosine/*analogs & derivatives/analysis ; DNA, Fungal/chemistry/*metabolism ; Genes, Fungal ; Genetic Complementation Test ; Methionine/metabolism ; Methylation ; Mutation ; Neurospora crassa/*genetics/growth & development ; Phenotype ; S-Adenosylmethionine/metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 4
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1989-06-30
    Description: In the Neurospora genome duplicate sequences are detected and altered in the sexual phase. Both copies of duplicate genes are inactivated at high frequency, whether or not they are linked. Restriction sites change, and affected sequences typically become heavily methylated. To characterize the alterations of the DNA, duplicated sequences were isolated before and after one or more sexual cycles. DNA sequencing and heteroduplex analyses demonstrated that the process (termed RIP) produces exclusively G-C to A-T mutations. Changes occur principally at sites where adenine is 3' of the changed cytosine. A sequence duplicated at a distant site in the genome lost approximately 10 percent of its G-C pairs in one passage through a cross. A closely linked duplication of the same sequence that was passed twice through a cross lost about half of its G-C pairs. The results suggest a mechanism for the RIP process.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cambareri, E B -- Jensen, B C -- Schabtach, E -- Selker, E U -- GM 35690/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1989 Jun 30;244(4912):1571-5.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Molecular Biology, University of Oregon, Eugene 97403.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2544994" target="_blank"〉PubMed〈/a〉
    Keywords: Base Composition ; Base Sequence ; Cytosine/metabolism ; DNA Replication ; DNA Restriction Enzymes ; DNA, Fungal/*genetics ; Meiosis ; Methylation ; Molecular Sequence Data ; *Mutation ; Neurospora/*genetics ; Neurospora crassa/*genetics ; Nucleic Acid Heteroduplexes ; Nucleic Acid Hybridization ; *Repetitive Sequences, Nucleic Acid
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 5
    Publication Date: 1995-01-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Foss, H M -- Roberts, C J -- Claeys, K M -- Selker, E U -- New York, N.Y. -- Science. 1995 Jan 20;267(5196):316.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/7824923" target="_blank"〉PubMed〈/a〉
    Keywords: Chromosomes, Fungal/*metabolism ; DNA, Fungal/*metabolism ; Genes, Fungal ; Genes, Recessive ; Methylation ; *Mutation ; Neurospora crassa/*genetics
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
    Publication Date: 1993-12-10
    Description: Cytosine methylation has been implicated in epigenetic control of gene expression in animals, plants, and fungi. It has been assumed that all methylation in eukaryotes is at symmetrical sequences such as CpG/GpC, because this can explain perpetuation of methylation states. Here the bisulfite genomic sequencing method was used to examine methylation in DNA from a Neurospora gene exposed to repeat-induced point mutation. 5-Methylcytosine was not limited to symmetrical sites and individual molecules showed different patterns and amounts of modification. The methylation extended beyond the mutated region and even beyond the edge of the duplicated segment.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Selker, E U -- Fritz, D Y -- Singer, M J -- GM 35690/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1993 Dec 10;262(5140):1724-8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Molecular Biology, University of Oregon, Eugene 97403.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/8259516" target="_blank"〉PubMed〈/a〉
    Keywords: 5-Methylcytosine ; Base Sequence ; Blotting, Southern ; Cytosine/*analogs & derivatives/analysis ; DNA Restriction Enzymes ; DNA, Fungal/chemistry/*metabolism ; DNA-Binding Proteins/genetics ; Fungal Proteins/genetics ; Genes, Fungal ; Glutamate Dehydrogenase/*genetics ; Methylation ; Molecular Sequence Data ; Neurospora crassa/enzymology/*genetics ; Point Mutation
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 7
    Publication Date: 1987-10-02
    Description: Methylation of cytosine residues in eukaryotic DNA is common, but poorly understood. Typically several percent of the cytosines are methylated; however, it is unclear what governs which sequences eventually become modified. Neurospora crassa DNA containing the "zeta-eta" (zeta-eta) region, which is a region of unusually heavy methylation, was tested for its ability to direct DNA methylation de novo. DNA stripped of its methylation by propagation in Escherichia coli was reintroduced into Neurospora crassa by transformation. The zeta-eta region reproducibly became "properly" methylated whether inserted at its native chromosomal position or at ectopic sites. Adjacent Neurospora and bacterial sequences in the transforming DNA rarely became methylated. A model is presented that accounts for position-independent faithful methylation as observed in the zeta-eta region, as well as position-dependent methylation, as occasionally observed, especially with sequences not native to Neurospora.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Selker, E U -- Jensen, B C -- Richardson, G A -- GM 35690/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1987 Oct 2;238(4823):48-53.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Molecular Biology, University of Oregon, Eugene 97403.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2958937" target="_blank"〉PubMed〈/a〉
    Keywords: DNA, Fungal/*genetics ; Gene Expression Regulation ; Genes, Fungal ; *Methylation ; Neurospora/*genetics ; Neurospora crassa/*genetics ; RNA, Ribosomal, 5S/genetics ; Transformation, Genetic
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1985-03-15
    Description: Neurospora crassa has at least seven types of 5S RNA genes (alpha, beta, gamma, epsilon, delta, zeta, and eta) with different coding regions. A high resolution gel electrophoresis system was developed to separate minor 5S RNA's from the major 5S RNA (alpha). A study of several Neurospora crassa strains, four other species in the genus Neurospora, members of two closely related genera, and three distantly related genera demonstrated that 5S RNA heterogeneity is common among fungi. In addition, different 5S RNA's are present in Neurospora ribosomes. The finding that fungal ribosomes are structurally heterogeneous suggests that ribosomes may be functionally heterogeneous as well.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Selker, E U -- Stevens, J N -- Metzenberg, R L -- GM-08995/GM/NIGMS NIH HHS/ -- New York, N.Y. -- Science. 1985 Mar 15;227(4692):1340-3.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/2579431" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Aspergillus nidulans/genetics/metabolism ; Bacillus cereus/genetics/metabolism ; Electrophoresis, Polyacrylamide Gel ; Escherichia coli/metabolism ; Neurospora crassa/genetics/metabolism ; RNA/metabolism ; RNA, Fungal/genetics/*isolation & purification ; RNA, Ribosomal/genetics/*isolation & purification ; Species Specificity ; Xenopus/metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 9
    Electronic Resource
    Electronic Resource
    Palo Alto, Calif. : Annual Reviews
    Annual Review of Genetics 24 (1990), S. 579-613 
    ISSN: 0066-4197
    Source: Annual Reviews Electronic Back Volume Collection 1932-2001ff
    Topics: Biology
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    Springer
    Molecular genetics and genomics 259 (1998), S. 60-71 
    ISSN: 1617-4623
    Keywords: Key words DNA methylation ; Neurospora ; Methyltransferase mutants ; 5-Azacytidine
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Mutants that show reduced DNA methylation were identified in a mutant screen based on the assumptions that (i) the nucleoside analog 5-azacytidine (5-azaC) promotes the formation of potentially lethal DNA-methyltransferase adducts; (ii) reduction in DNA methyltransferase will decrease the sensitivity of cells to 5-azaC; and (iii) this potential selective advantage will be enhanced in mutants that are deficient in the repair of 5-azaC-induced DNA damage. Of fifteen potential repair mutants screened for sensitivity to 5-azaC, five (mus-9, mus-10, mus-11, mus-18, and uvs-3) showed moderately increased sensitivity and two (mus-20, mei-3) showed highly increased sensitivity. A mus-20 mutation was used to isolate three non-complementing methylation mutants. The mutations, named dim-1 (defective in methylation), reduced female fertility, reduced methylation by 40–50%, and altered patterns of methylation. In wild-type strains hypomethylation perse fails to alter methylation specificity. We demonstrate a growth-phase-dependent change in methylation patterns, detectable only in hypomethylated DNA from dim + cultures. This may represent a growth-phase-dependent change in the relative amounts of distinct species of methyltransferase, one of which may be encoded by the dim-1 gene.
    Type of Medium: Electronic Resource
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